BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038673
(548 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/560 (72%), Positives = 480/560 (85%), Gaps = 12/560 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD +PRLVF+QV+Y NPFLWTALIRGY LQG +S+ LY SMRR+GIGPVSFT +AL K
Sbjct: 88 MDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLK 147
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC+ LDV+LG+Q+H QTIL+GGF SDLYVGNT+I MYVKCG LGC +VFDEM +RDV+
Sbjct: 148 ACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVI 207
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT LIVAYA G+ME+A LF+ LP+KD VAWTAMVTGY QNA+PREA+E FERMQ AG
Sbjct: 208 SWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAG 267
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+TD VTLVGVISACAQLG KYANWV ++AE SGFGP +NVVVGSALIDMY+KCGS++D
Sbjct: 268 VKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVED 327
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY++F M++RNV+SYSSMI+GFAMHG A AA++LF +M+KTE KPN VTFIGVLTACSH
Sbjct: 328 AYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSH 387
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ +C+GV+PS DHYACMVDLLGRAG LEEAL +V+ MP+ P+GGVWG
Sbjct: 388 AGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWG 447
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+IH NP++AQIAA+HLFELEP+ IGNYI+LSNIYASAG WDDVS+VR+L++ G
Sbjct: 448 ALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKG 507
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKKNPG SW+EG +G+IHEF AGD++HP S EI+QAL DLLDRL+ GYQPNL SV YD+
Sbjct: 508 LKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDI 567
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
SDEEKKR+LM+HSEKLALAFGLLTT+ G T+RI+KNLRICEDCH MCGASQ+ GREIVV
Sbjct: 568 SDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVV 627
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDNMRFHHF+DG+CSCGN+W
Sbjct: 628 RDNMRFHHFRDGRCSCGNFW 647
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/560 (70%), Positives = 471/560 (84%), Gaps = 12/560 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S+P LVF QV Y NPFLWTA+IRGY LQG L +S + Y MRR+G+GPVSFT SALFK
Sbjct: 91 MGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFK 150
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L++ LG+Q+HAQTIL+GGF SDLYVGN+MI +YVKCGFLGC+RKVFDEM ERDVV
Sbjct: 151 ACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVV 210
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTELIVAYA GDMESA GLF++LPLKD VAWTAMVTGY QN +P+EA+EYF++MQ G
Sbjct: 211 SWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG 270
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ETD VTL GVISACAQLG +K+ANW+ +IAE SGFGP NVVVGSALIDMYSKCGS D+
Sbjct: 271 METDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDE 330
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY++F MK+RNVFSYSSMILG+AMHGRAH+A+QLF DM+KTE +PN VTFIG+L+ACSH
Sbjct: 331 AYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSH 390
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL K +GV+PS DHYACMVDLLGRAGCLEEAL +V+ MP+EPNGGVWG
Sbjct: 391 AGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWG 450
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+IH NP+IAQIAAN LF+LEP+ IGNYI+LSNIYASAG W++VS++R++++ G
Sbjct: 451 ALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKG 510
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KKNPG SW EG G IH+F AGD THP S+EI+QAL L++RL++ GY+PNL S YD+
Sbjct: 511 FKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDL 570
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+D+EK+RILM+HSEKLALA+GLL T G T++IMKN+RICEDCH MC AS++ GREI+V
Sbjct: 571 TDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIV 630
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDNMRFHHF +G CSCGN+W
Sbjct: 631 RDNMRFHHFHNGTCSCGNFW 650
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/560 (70%), Positives = 470/560 (83%), Gaps = 12/560 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S+P LVF QV Y NPFLWTA+IRGY LQG L +S + Y MRR+G+GPVSFT SALFK
Sbjct: 91 MGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFK 150
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L++ LG+Q+HAQTIL+GGF SDLYVGN+MI +YVKCGFLGC+RKVFDEM ERDVV
Sbjct: 151 ACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVV 210
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTELIVAYA GDMESA GLF++LP KD VAWTAMVTGY QN +P+EA+EYF++MQ G
Sbjct: 211 SWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG 270
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ETD VTL GVISACAQLG +K+ANW+ +IAE SGFGP NVVVGSALIDMYSKCGS D+
Sbjct: 271 METDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDE 330
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY++F MK+RNVFSYSSMILG+AMHGRAH+A+QLF DM+KTE +PN VTFIG+L+ACSH
Sbjct: 331 AYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSH 390
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL K +GV+PS DHYACMVDLLGRAGCLEEAL +V+ MP+EPNGGVWG
Sbjct: 391 AGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWG 450
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+IH NP+IAQIAAN LF+LEP+ IGNYI+LSNIYASAG W++VS++R++++ G
Sbjct: 451 ALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKG 510
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KKNPG SW EG G IH+F AGD THP S+EI+QAL L++RL++ GY+PNL S YD+
Sbjct: 511 FKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDL 570
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+D+EK+RILM+HSEKLALA+GLL T G T++IMKN+RICEDCH MC AS++ GREI+V
Sbjct: 571 TDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIV 630
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDNMRFHHF +G CSCGN+W
Sbjct: 631 RDNMRFHHFHNGTCSCGNFW 650
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/560 (67%), Positives = 463/560 (82%), Gaps = 12/560 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D +P +F QV Y NPFL+ ALIRGY+++ LK+S Y MR+EG+ PVSFT +ALFK
Sbjct: 95 VDPYPLSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFK 154
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC +DV LG+QIH QTIL+GGF DL+VGN+MI MY+KCGFL C RKVFDEMP RDV+
Sbjct: 155 ACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVI 214
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTELI AY +G+MESAG LF+ LP+KD VAWT MV+G+ QNAKPREAI +FE+MQ G
Sbjct: 215 SWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFG 274
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
VETD +TL+GVISACAQLG KYA+W+ ++AE S FG ++VVVGSALIDMYSKCGS+ D
Sbjct: 275 VETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGD 334
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AYR+F GMK+RNV+SYSSMILGFAMHGR H A++LF +MVKTE KPN VTFIGVLTACSH
Sbjct: 335 AYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSH 394
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ KCYG+ PS DHY CMVDLLGRAG L+EA ++V+ MP+EP+GGVWG
Sbjct: 395 AGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWG 454
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+IH++P+IA IAANHLFELEP IGNYI+L+NIYAS G W+DVS VR+L++ G
Sbjct: 455 ALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRG 514
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
L+KNP +SW+E ++G++HEF +GD+THP S EI+QAL DLLDRL+A GYQP+L SV YDV
Sbjct: 515 LRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDV 574
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+DE+K+RILMTHSEKLALAFGL++T PG+ +RI+KNLRICEDCH +CGASQ+ GREI+V
Sbjct: 575 NDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIV 634
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD MRFHHF DG CSCGN+W
Sbjct: 635 RDIMRFHHFHDGICSCGNFW 654
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/560 (63%), Positives = 441/560 (78%), Gaps = 12/560 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+ S+PRL+F Q+ NPF WTALIR Y L+G L ++S Y SMR+ + P+SFT SALF
Sbjct: 58 LHSYPRLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFS 117
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC V +LG Q+HAQT+LLGGF+SDLYV N +I MYVKCG L C+R VFDEMPERDV+
Sbjct: 118 ACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVI 177
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT LIVAY GDM +A LF+ LP+KD V WTAMVTGY QNA P +A+E F R++ G
Sbjct: 178 SWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEG 237
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
VE D VTLVGVISACAQLG KYANW+ +IAE SGFG +NV+VGSALIDMYSKCG++++
Sbjct: 238 VEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEE 297
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY +F GM++RNVFSYSSMI+GFA+HGRA AAI+LF DM++T KPN VTF+GVLTACSH
Sbjct: 298 AYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSH 357
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL KCYGV+P+ + YACM DLL RAG LE+AL++VE MP+E +G VWG
Sbjct: 358 AGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWG 417
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGA +H NP++A+IA+ LFELEPD IGNY++LSN YASAG WDDVS+VR+LL+
Sbjct: 418 ALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKN 477
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKKNPG+SW+E G+IH+F AGD++HP EI++ L DLL+RL+ GYQPNL S+ Y +
Sbjct: 478 LKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGI 537
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+D EK+ +LM HSEKLALAFGLL+T G+T++IMKNLRICEDCH+ MCGAS+V GR+IVV
Sbjct: 538 NDREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVV 597
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDN RFHHF +G CSC N+W
Sbjct: 598 RDNTRFHHFLNGACSCSNFW 617
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/558 (61%), Positives = 430/558 (77%), Gaps = 16/558 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++P L+F QV NPFL++ALIR Y G SI LY SM + PVSFT SALF
Sbjct: 63 TYPHLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF--- 119
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + SLG Q+H L G F +DLYVGNT+I MYVK G L C+RKVFDEMP RDVV+W
Sbjct: 120 SLLKNPSLGSQLHLHAFLFG-FVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTW 178
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
TELIVAYA +GDM+SA LF LP+KD VAWT+MVTGY QNA P++A+++F +M+ AGV
Sbjct: 179 TELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVV 238
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
TD +TLVG ISACAQLGV YA+W+ EIAE S FG +NV VGSALIDMYSKCG++++AY
Sbjct: 239 TDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAY 298
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F GMK+ NVFSYSSMI+GFA+HGRA +AI+LF +M++ KPN VTF+G+ TACSH G
Sbjct: 299 NVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAG 358
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ +CYGVSP+ DHYACM DLLGRAG LE+AL++V+ MP+EPNGGVWGAL
Sbjct: 359 MVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGAL 418
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA IH NP++A+IA+ LFELEPD +GNY++LS YA A WDDVSRVR+L++ L+
Sbjct: 419 LGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLR 478
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
KNPG SW+E G+IHEF AGD+ HP EI++AL DLL RL+ GYQP L SV YD+ D
Sbjct: 479 KNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDD 538
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K+ +L++HSEKLALA+GLL+T G+T++IMKNLRICEDCH+ MCGAS++ GR+I+VRD
Sbjct: 539 EGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRD 598
Query: 531 NMRFHHFQDGKCSCGNYW 548
NMRFHHF +G CSC N+W
Sbjct: 599 NMRFHHFLNGACSCNNFW 616
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/561 (61%), Positives = 429/561 (76%), Gaps = 14/561 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD +PR V E V+++NPFLWTA+IRGY ++G ++I++Y MR+E I PVSFT SAL K
Sbjct: 99 MDPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 158
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + D++LG+Q HAQT L GF +YVGNTMI MYVKCG + C+RKVFDEMPERDV+
Sbjct: 159 ACGSMGDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCGSIVCARKVFDEMPERDVI 217
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTELI AYA G+MESA LF LP KD VAWTAMVTG+ QNAKP+EA+EYF+RM+ +G
Sbjct: 218 SWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 277
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT+ G ISACAQLG KYA+ +IA+ SG+ P ++VV+GSALIDMYSKCG++++
Sbjct: 278 IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 337
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACS 299
A +FV M +NVFSYSSMILG A HGRA A+ LF MV +T KPN VTF+G LTACS
Sbjct: 338 AVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACS 397
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +GV P+ DHY CMVDLLGRAG L+EAL++++ M VEP+GGVW
Sbjct: 398 HSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVW 457
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALLGAC+IH NP+IA+IAA HLFELEPD IGNYI+LSN+Y+SAG W V VR+L+K
Sbjct: 458 GALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEK 517
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GLKK P SW+ G +H+F G+L HP S +IQ L +L++RL A GYQP+L SV YD
Sbjct: 518 GLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYD 577
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
VSD K+ IL+ H+EKLALAF LLTT+ T++IMKNLR+C+DCH+FM AS+V GR I+
Sbjct: 578 VSDNAKRLILIQHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVII 637
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RDNMRFHHF+ G CSCG++W
Sbjct: 638 MRDNMRFHHFRSGACSCGDFW 658
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 423/561 (75%), Gaps = 14/561 (2%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD + R V E V+++NPFLWTA+IRGY ++G ++I++Y MR+E I PVSFT SAL K
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + D++LG+Q HAQT L GF +YVGNTMI MYVKC + C+RKVFDEMPERDV+
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVI 216
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTELI AYA G+ME A LF LP KD VAWTAMVTG+ QNAKP+EA+EYF+RM+ +G
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT+ G ISACAQLG KYA+ +IA+ SG+ P ++VV+GSALIDMYSKCG++++
Sbjct: 277 IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACS 299
A +F+ M +NVF+YSSMILG A HGRA A+ LF MV +TE KPN VTF+G L ACS
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACS 396
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +GV P+ DHY CMVDLLGR G L+EAL++++ M VEP+GGVW
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVW 456
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALLGAC+IH NPEIA+IAA HLFELEPD IGNYI+LSN+YASAG W V RVR+L+K
Sbjct: 457 GALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK 516
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GLKK P SW+ G +H+F G+L HP S +IQ L +L++RL GYQP+L SV YD
Sbjct: 517 GLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYD 576
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
VSD K+ IL+ H+EKLALAF LLTT+ +T+ IMKNLR+C DCH FM AS+V G+ I+
Sbjct: 577 VSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVII 636
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RDNMRFHHF+ G CSCG++W
Sbjct: 637 MRDNMRFHHFRSGDCSCGDFW 657
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/557 (54%), Positives = 393/557 (70%), Gaps = 18/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG---IGPVSFTLSALFKACTE 64
VF V +PFL AL+R L ++ +RR + + F S L K+ T
Sbjct: 94 VFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELPFLPFAFSTLAKSATA 153
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ HA ++L+GGF +V N++IG YV CG +G +RKVFDEM E+DV+SWT
Sbjct: 154 SRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTS 213
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++VAY +GDM SA +F P+KD VAWTAMVTGY QNA P +A+E F+RM G+ D
Sbjct: 214 IVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVID 273
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+L G ISACAQLG ++ A WV EIAE +GFG NNVVVGS L+DMY+KCG ID+A ++
Sbjct: 274 EVSLTGAISACAQLGALRRAAWVQEIAERTGFG--NNVVVGSGLVDMYAKCGLIDEASKV 331
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGL 303
F GM+++NV++YSSMI G A HGRA AI LF +MV + +PN VTFIGVLTACSH G+
Sbjct: 332 FYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGM 391
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
YG+ PS DHYACMVDLLGRAG ++EAL +V M V P+GGVWGALL
Sbjct: 392 VGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALL 451
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH EIA++ A HLF+LEP+ IGNY++LSNI ASAG W++VS+VR L++ LKK
Sbjct: 452 GACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKK 511
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+P S EG G++H+F AGD HP + EI++AL +L+ +L+ +GY P L S++YDV+DE
Sbjct: 512 DPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYDVNDE 571
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+R+LM HSEKLAL+FGLLT G T+RI+KNLRIC+DCHLFM S+V EI+VRDN
Sbjct: 572 EKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESVEIIVRDN 631
Query: 532 MRFHHFQDGKCSCGNYW 548
MRFHHF++G+CSCG +W
Sbjct: 632 MRFHHFKNGECSCGGFW 648
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 72/319 (22%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKD------------------------------ 35
R VF+++ K+ WT+++ Y G ++
Sbjct: 197 RKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPV 256
Query: 36 -SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG---QQIHAQTILLGGFTSDLYVG 91
++ ++ M G+ +L+ AC ++ + Q+I +T GF +++ VG
Sbjct: 257 KALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERT----GFGNNVVVG 312
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
+ ++ MY KCG + + KVF M E++V +++ +I A++G A LF E+
Sbjct: 313 SGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEM------ 366
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN-WVCEI 210
+ A VE ++VT +GV++AC+ G++ + ++
Sbjct: 367 ------------------------VNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQM 402
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA-MHGRA 269
+ G P + + ++D+ + G +D+A + M +LG +HG++
Sbjct: 403 KDKYGIMPSADHY--ACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKS 460
Query: 270 HAAIQLFGDMVKTETKPNG 288
A + + K E + G
Sbjct: 461 EIAKVVAEHLFKLEPESIG 479
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 300/557 (53%), Positives = 394/557 (70%), Gaps = 18/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR---EGIGPVSFTLSALFKACTE 64
VF + +PFL AL+R L ++ ++ +RR + + F S L K+
Sbjct: 99 VFSSLSPPDPFLAAALLRFAHLTQPPLETFRVFSGLRRAHGRDLPFLPFAFSPLAKSAAA 158
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ HA ++LLGGF +V N++IG YV CG +G +RKV DEM +DV+SWT
Sbjct: 159 ARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKDVISWTS 218
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ AY+ + DM SA +F P+KD VAWTAMVTGY QNA P +A+E FE+M AG+ D
Sbjct: 219 IVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAGMPID 278
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+L G ISACAQLG ++ A W+ EIA+ SG G NVVVGS L+DMY+KCG ID+A R+
Sbjct: 279 EVSLTGAISACAQLGAVRRAVWIQEIADRSGLG--RNVVVGSGLVDMYAKCGLIDEACRV 336
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL 303
F GM+++NV++YSSMI+G A HGRA+ AI LF DMV+ + +PN VTFIGVLTACSH G+
Sbjct: 337 FEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAGM 396
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
YG+ PS DHY CMVDLLGRAG + EAL +V+ M VEP+GGVWGALL
Sbjct: 397 VKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGALL 456
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH N ++A++AA HLF+LEP+ IGNY++LSN ASAG WD+VS+VR+L+++ GLKK
Sbjct: 457 GACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLKK 516
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+P S EG G++H+F AGD THP EI++ L +L RL+ GY P L SV+Y+VSDE
Sbjct: 517 DPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLELRARLKLAGYVPVLSSVVYNVSDE 576
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+R+LM HSEKLAL+FGLLT +++RI+KNLRICEDCHLF+ S+V EI+VRDN
Sbjct: 577 EKERLLMGHSEKLALSFGLLTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEIIVRDN 636
Query: 532 MRFHHFQDGKCSCGNYW 548
MRFHHF+DG+CSCG +W
Sbjct: 637 MRFHHFRDGECSCGGFW 653
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/557 (53%), Positives = 390/557 (70%), Gaps = 18/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR---REGIGPVSFTLSALFKACTE 64
VF + +PFL AL+R L ++ L+ +R + + F S L K+
Sbjct: 110 VFSSLSPPDPFLAAALLRFAHLTQPPLETFRLFSRLRCAHGSDLPFLPFAFSPLAKSAAA 169
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ HA ++LLGGF +V N++I YV CG +G +RKVFDEM +DV+SWT
Sbjct: 170 ARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACGDVGAARKVFDEMLVKDVISWTS 229
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++VAY+ DM SA +F P+KD VAWTAMVTGY QNA P +A+E FE+M AG+ D
Sbjct: 230 IVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGMPID 289
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+L G ISACAQLG +K A WV EIAE +G G NVVVGS L+DMY+KCG ID+A ++
Sbjct: 290 EVSLTGAISACAQLGAVKRAAWVQEIAERNGLG--RNVVVGSGLVDMYAKCGLIDEARKV 347
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL 303
F GM +NV++YSSMI+G A HGRA+ I LF DMV+ + +PN VTFIGVLTACSH G+
Sbjct: 348 FEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTACSHAGM 407
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
YG+ PS DHYACMVDLL R+G + EAL +V+ M VEP+GGVWGALL
Sbjct: 408 VKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGVWGALL 467
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH N E+A+IAA HLF LEP+ IGNY++LSN ASAG WD+VS++R+L+++ GLKK
Sbjct: 468 GACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLMRIRGLKK 527
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+P SW EG G +H+F AGD THP+ EI++ L +L ++L GY P L SV+Y+VS+E
Sbjct: 528 DPAVSWFEGRDGFVHQFFAGDNTHPSMHEIKKRLLELREKLNLAGYVPILSSVVYNVSEE 587
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+R+LM HSEKLAL+FGLLT +++RI+KNLRICEDCHLF+ S+V EI+VRDN
Sbjct: 588 EKERLLMGHSEKLALSFGLLTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEILVRDN 647
Query: 532 MRFHHFQDGKCSCGNYW 548
MRFHHF+DG+CSCG +W
Sbjct: 648 MRFHHFRDGECSCGGFW 664
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 284/511 (55%), Positives = 371/511 (72%), Gaps = 15/511 (2%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
+ F S L K+ + Q HA + L+GGF +V N++IG Y+ CG +G +RKV
Sbjct: 144 LPFAFSPLAKSAAAARSLPAAQAAHAVSFLVGGFDKHRFVENSLIGAYIACGDVGAARKV 203
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FDEM +DV+ WT ++VAY+ + DM SA +F + P+KD VAWTAMVTGY QNA P +A+
Sbjct: 204 FDEMVVKDVICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKAL 263
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
E F+RM G+ D V+L G ISACAQLG +K A WV EIAE +GFG NVVVGS L+D
Sbjct: 264 EVFDRMTALGIGIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFG--MNVVVGSGLVD 321
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGV 289
MY+KCG ID+A ++F GM+++NV++YSSM++G A HGRA AI LF DMV+ + PN V
Sbjct: 322 MYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHV 381
Query: 290 TFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
TFIGVLTACSH G+ YG+ PS DHY CMVDLLGRAG ++EAL +V
Sbjct: 382 TFIGVLTACSHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRS 441
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDV 397
M VEP+GGVWGALLGAC+IH E+A++AA HLF+LEP+ IGNY++LSN A+AG WD+V
Sbjct: 442 MTVEPHGGVWGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEV 501
Query: 398 SRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY 457
S+VR++++ LKK P SW EG G++H+F AGD +HP + EI++AL +L+ +L+ GY
Sbjct: 502 SKVRKVMRSRRLKKVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGY 561
Query: 458 QPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG 517
P L S++YDVS+EEK+R+LM HSEKLAL FGLLT T+RI+KNLRIC+DCHLF+
Sbjct: 562 VPILSSIVYDVSNEEKERLLMGHSEKLALLFGLLTLGSRCTIRIVKNLRICDDCHLFIRL 621
Query: 518 ASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+ EI+VRDNMRFHHF+DG+CSCG +W
Sbjct: 622 VSRFEPVEIIVRDNMRFHHFKDGECSCGGFW 652
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/565 (43%), Positives = 364/565 (64%), Gaps = 23/565 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ +F Q K N FL+ +I G +L ++SI +Y SMR+EG+ P SFT L KAC
Sbjct: 59 NYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC 118
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+LD LG ++H ++ G SD +V +++ +Y KCGF+ + KVFD++PE++V +W
Sbjct: 119 ARLLDSKLGIKLHG-LVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAW 177
Query: 123 TELIVAYANNG------DM-ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
T +I Y G DM A +F+ + KD V+W++M+ GY N P+EA++ F +
Sbjct: 178 TAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFK 237
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M G D +VGV+ ACA+LG ++ NW + + + F + N V+G+ALIDMY+KC
Sbjct: 238 MLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEF--LGNPVLGTALIDMYAKC 295
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +D A+ +F GM+++++ +++ I G AM G AA LFG M K+ +P+G TF+G+L
Sbjct: 296 GRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLL 355
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
AC+H GL + + ++P +HY CMVDLLGRAG L+EA ++V+ MP+E N
Sbjct: 356 CACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEAN 415
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
VWGALLG C++HR+ ++ + L LEP GNY++LSNIY+++ W+D +++R +
Sbjct: 416 AIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSI 475
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
+ G+KK PGYSW+E D GV+HEF GD +HP S +I LG+L+ L+A GY P
Sbjct: 476 MSERGIKKVPGYSWIEVD-GVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDY 534
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
VL+D+ +EEK+ + HSEKLA+AFGL++T+P +R++KNLR+C DCH + S+ G
Sbjct: 535 VLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTG 594
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
REI+VRDN RFH F DG CSC +YW
Sbjct: 595 REIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 108/274 (39%), Gaps = 82/274 (29%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+ +HA + LG D Y+ N ++ G S ++F + E ++
Sbjct: 27 KHVHAALLRLG-LDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIF----------- 74
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
LFN M+ G V N +E+IE + M+ G+ D T +
Sbjct: 75 ---------LFN-----------TMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFL 114
Query: 192 ISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR--- 243
+ ACA +LG+ + V E F V ++L+ +Y KCG ID+A++
Sbjct: 115 LKACARLLDSKLGIKLHGLVVKAGCESDAF-------VNTSLVSLYGKCGFIDNAFKVFD 167
Query: 244 -----------------------------------IFVGMKQRNVFSYSSMILGFAMHGR 268
+F GM ++++ S+SSMI G+A +G
Sbjct: 168 DIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGL 227
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
A+ LF M+ +P+ +GVL AC+ +G
Sbjct: 228 PKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G+ + ++RIF K+ N+F +++MI G ++ +I+++ M K P+ TF +L
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 296 TAC-----SHVGLKCYGV----SPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC S +G+K +G+ +D + +V L G+ G ++ A K+ + +P E N
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNV 174
Query: 345 GVWGALL 351
W A++
Sbjct: 175 AAWTAII 181
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/558 (44%), Positives = 357/558 (63%), Gaps = 16/558 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +L+F+ + W +R + D+ISL+ +R I P +T S + KAC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ +LDV G+ +H LG S++++ N ++ +Y CG +G +RKVFD+MP+RDV++W
Sbjct: 124 SRLLDVRNGKIVHGYVEKLG-LQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITW 182
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I GD E A LF E+P ++ +WT+M+ GY Q K +EAI+ F M+ AG+
Sbjct: 183 NIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL 242
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT+V V+ ACA +G + + + + SG+ N+ V + LIDMY KCG ++DA
Sbjct: 243 PNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYE--KNIRVCNTLIDMYVKCGCLEDAC 300
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
RIF M++R V S+S+MI G A HGRA A+ LF M+ T KPN VTFIG+L ACSH+G
Sbjct: 301 RIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMG 360
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ + YG+ P +HY CMVDL RAG L+EA + + MP+ PNG VWGAL
Sbjct: 361 MVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGAL 420
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C++H+N ++A+ A HL +L+P G Y++LSNIYA AG W+DV+RVR+L++ G+K
Sbjct: 421 LGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVK 480
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG+S + + GV++ F AGD THP + EI Q LL R++ GY PN VL D+ +
Sbjct: 481 KTPGWSSIMVE-GVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEE 539
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
++K++ L HSEKLA+ FGL+ T+PG +RIMKNLR+CEDCH + S V REIVVRD
Sbjct: 540 DQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRD 599
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F++G CSCG+YW
Sbjct: 600 RNRFHCFKNGSCSCGDYW 617
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/559 (44%), Positives = 361/559 (64%), Gaps = 18/559 (3%)
Query: 4 FPRLVFEQVKYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
+ + +F+ V+ + P F+W + ++ D+I L+ +R+ + P +FT S++ +A
Sbjct: 78 YAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRA 137
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C +LD+S G+ +H + GF S+LY+ N ++ +Y CG +G +R +F++MP+RDVV+
Sbjct: 138 CLNLLDLSNGRILHG-VVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVT 196
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I GD E A LF+ +P ++ +WT+M+ GYVQ K +EAI F +M+ AGV
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + VT+V V++ACA LG + + E + GF NV + + LIDMY KCG +++A
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK--RNVRISNTLIDMYVKCGCLEEA 314
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R V S+S+MI G AMHGRA A++LF DM + +PNGVTFIG+L ACSH+
Sbjct: 315 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY CMVDLL RAG L EA + + MP++PNG VWGA
Sbjct: 375 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 434
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC++H+N E+A+ A HL EL+P G Y++LSNIYA AG W+D +RVR+ +K +
Sbjct: 435 LLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQV 494
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG+S + D GV+HEF AG+ +HP++ +I Q +LL+ ++ GY PN VL D+
Sbjct: 495 KKTPGWSSITVD-GVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIE 553
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+ EK + + HSEKLAL FGL+ T +RIMKNLRICEDCH S ++ REIVVR
Sbjct: 554 EGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVR 613
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFH F D CSC +YW
Sbjct: 614 DRNRFHCFNDNSCSCRDYW 632
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/589 (41%), Positives = 364/589 (61%), Gaps = 48/589 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKAC 62
+ R VF+++ + F+W +IR Y+ + ++S+SL+ MR + P+ S++LS + +AC
Sbjct: 56 YARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC 115
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV------------ 110
+ D GQ++H Q +L G SDL+V +I MY K G + +R +
Sbjct: 116 GRLKDPGNGQKLHTQ-VLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPY 174
Query: 111 -------------------FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
FD MPERD+VSW +I +A+ GD+ +A LF+ +D +
Sbjct: 175 NVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLI 234
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W++M+ Y + + EA+ F MQ A V D VT+V V+SAC +G + + E
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI 294
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E + ++ +G++L+DMY+KCG ID++ R+F GM R+VF++S+MI+G A HG
Sbjct: 295 ERNRIEI--DLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMV 319
A+ F M+ + KPN VTFIGVL+ACSH+GL K Y VSP +HY C+V
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVV 412
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
D+LGRAG L+EA+++++ MP P+ VW ALLGAC+I++N EIA+ A +L ELEP G
Sbjct: 413 DILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDG 472
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
NY++LSNIY+ A WD V VRR++K ++K PG S +E D V HEF AGD +HP S
Sbjct: 473 NYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAV-HEFVAGDQSHPESK 531
Query: 440 EIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
+I + L ++ RL+A+GY P SVL D ++EK+ L HSEKLA+AFGLL+T+PG+T+
Sbjct: 532 KILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTI 591
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
RI+KNLR+C+DCH+ + S+ R I+VRD RFHHF +G CSC +YW
Sbjct: 592 RIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETD 184
+ A ++ D+ A +F+E+P D W M+ Y+ + P+E++ F +M++ + D
Sbjct: 45 LFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPID 104
Query: 185 YVTLVGVISACAQL----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+L VI AC +L K V +I GS ++ V +ALI+MY+K G I+
Sbjct: 105 SYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGS------DLFVETALIEMYAKFGDIEI 158
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG-----DMVKTETKPNGVTFIGVL 295
A I M ++ Y+ ++ + G + A LF D+V T +G +G +
Sbjct: 159 ARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDV 218
Query: 296 TACSHVGLKCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGAL 350
K + + D ++ M+ +A EAL++ +M V P+ ++
Sbjct: 219 GTAK----KLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274
Query: 351 LGAC 354
L AC
Sbjct: 275 LSAC 278
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/560 (42%), Positives = 352/560 (62%), Gaps = 18/560 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +F+ + K+ W ++I + +D++ L+ M RE + P S T+ + AC
Sbjct: 178 SMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC 237
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ LD+ G+ + I G DL + N M+ MY KCG + ++K+FDEMPERDV SW
Sbjct: 238 AKKLDLEFGRWV-CSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSW 296
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV- 181
T ++ YA GD ++A +FN +P+K+ AW +++ Y QN KP+EA+ F +Q + +
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D VTLV +SACAQLG I W+ + G + N + S+L+DMY+KCGS++ A
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGI--VLNCHLISSLVDMYAKCGSLEKA 414
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F +++R+V+ +S+MI G MHGR AAI LF +M + + KPN VTF VL ACSH
Sbjct: 415 LEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHA 474
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YGV P HYACMVD+LGRAG LEEA++++ +M P+ VWGA
Sbjct: 475 GLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGA 534
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC +H N E+ ++A++ L +LEP G ++LSNIYA G W+ VS +R+L++ T L
Sbjct: 535 LLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTEL 594
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG S +E + G +HEF GD THP S+ I L ++ +L++ GY+PN +L +
Sbjct: 595 KKEPGCSSIEAN-GNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIE 653
Query: 470 DEE-KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+++ K++ L HSEKLA+AFGL+T +P +R++KNLRIC DCH F S+V R+I++
Sbjct: 654 EDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILL 713
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+DG CSC +YW
Sbjct: 714 RDRYRFHHFRDGHCSCMDYW 733
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 88/442 (19%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFKA 61
+ R +F+Q+ N + W LIR Y S ++ + + E + P FT + KA
Sbjct: 77 YARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKA 135
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+E+ +G +H I L F DLY+ N+++ Y CG
Sbjct: 136 ASELKASRVGTAVHGMAIKLS-FGMDLYILNSLVRFYGACG------------------- 175
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
D+ A LF + KD V+W +M++ + Q P +A+E F +M+ V
Sbjct: 176 ------------DLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENV 223
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT+VGV+SACA+ +++ WVC E G ++ + +A++DMY+KCGS+DDA
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKV--DLTLCNAMLDMYTKCGSVDDA 281
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE------------------ 283
++F M +R+VFS++ M+ G+A G AA +F M E
Sbjct: 282 QKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPK 341
Query: 284 --------------TKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACM 318
KP+ VT + L+AC+ HV +K G+ + + +
Sbjct: 342 EALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSL 401
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
VD+ + G LE+AL++ + E + VW A++ +H + A + FE++ K+
Sbjct: 402 VDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAAIDLFFEMQEAKV 457
Query: 379 G-NYIILSNIYAS---AGMWDD 396
N + +N+ + AG+ D+
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDE 479
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 118/250 (47%), Gaps = 21/250 (8%)
Query: 118 DVVSWTELIVAYA--NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA-IEYFE 174
D S ++L A A + ++ A LF+++P + W ++ Y ++ P ++ + + +
Sbjct: 56 DPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLD 115
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+ + T VI A ++L + V +A FG ++ + ++L+ Y
Sbjct: 116 LLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG--MDLYILNSLVRFYGA 173
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + A R+F G+ ++V S++SMI FA A++LF M + PN VT +GV
Sbjct: 174 CGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGV 233
Query: 295 LTA-------------CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
L+A CS++ K G+ M+D+ + G +++A K+ ++MP E
Sbjct: 234 LSACAKKLDLEFGRWVCSYIERK--GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-E 290
Query: 342 PNGGVWGALL 351
+ W +L
Sbjct: 291 RDVFSWTIML 300
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/546 (44%), Positives = 339/546 (62%), Gaps = 17/546 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VLDVSLGQQI 74
P W ALI G+ G +S + M R G P T ++ AC + DV LG Q+
Sbjct: 86 TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQV 145
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + ++ G DL V N ++ MY +C +G + KVFD M R VVSWT L+ A G
Sbjct: 146 HGR-VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQ 204
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
++ A LF+ +P +D V+WTAM+ GYV A+ REA+E F MQY+ V D T+V VI+A
Sbjct: 205 VDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITA 264
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CAQLG ++ WV G + VG+ALIDMYSKCGSI+ A +F GM R+ F
Sbjct: 265 CAQLGALEMGEWVRVYMSRQGIK--MDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKF 322
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
+++++ILG A++G AI++F M++ P+ VTFIGVLTAC+H GL
Sbjct: 323 TWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSM 382
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
+ Y ++P+ HY C++DLLGRAG + EAL +++MP+ PN +WG LL AC++H N EI
Sbjct: 383 IEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEI 442
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
++ A L EL+P+ YI+LSNIYA W+DV R+R + G+KK PG S +E D
Sbjct: 443 GELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMD- 501
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
G+IHEF AGD +HP S EI L ++ L GY P++ V +V+++EKK++L HSE
Sbjct: 502 GIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSE 561
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+AF LL++ P +RI+KNLR+C DCH + S++ GRE+VVRD RFHHF+ G C
Sbjct: 562 KLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFC 621
Query: 543 SCGNYW 548
SC +YW
Sbjct: 622 SCKDYW 627
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ WTA+I GY+ ++++ ++ M+ + FT+ ++ AC ++
Sbjct: 209 RDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQL 268
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G+ + + G D +VGN +I MY KCG + + VF M RD +WT +
Sbjct: 269 GALEMGEWVRVY-MSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ A NG E EAIE F RM D
Sbjct: 328 ILGLAVNGYEE-------------------------------EAIEMFHRMIRVSETPDE 356
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT +GV++AC G++ K + + E P NVV +ID+ + G I +A
Sbjct: 357 VTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAP--NVVHYGCIIDLLGRAGKITEA 411
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + +++ F WTA+I G + G+ +++I ++ M R P T + ACT
Sbjct: 312 VFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGL 371
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G++ I ++ +I + + G + + D+MP + W L+
Sbjct: 372 VDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLL 431
Query: 127 VAYANNGDME 136
A +G+ E
Sbjct: 432 AACRVHGNSE 441
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/518 (45%), Positives = 332/518 (64%), Gaps = 16/518 (3%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M +G+ P FTLS + KAC + + G+Q H I +G F SD+ V ++ MY +CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMG-FESDVVVQTALVHMYARCG 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L + VFD+M ER +W +I +A N DM+ A LF E+ +D V+WTA++ GY Q
Sbjct: 60 SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N E++ F +M+ G+++D + V+SACA L ++ SGF ++
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFAL--DI 177
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
VVGSAL+DMY+K GS++DA ++F M QRN S++S+I G A HGR + A+ LF M++
Sbjct: 178 VVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQA 237
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
KPN ++F+GVL+ACSH GL + YG+ P HY CM+DLLGRAGCL+E
Sbjct: 238 GIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDE 297
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A + MPVEP+ VWGALLGAC+IH N E+A+ A HL +E G Y++LSNIYA+
Sbjct: 298 AENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAA 357
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
AG WDD ++VR+L+K G+ K PGYSW+E + ++H F AG+ +HP EI + L L
Sbjct: 358 AGQWDDAAKVRKLMKDRGVMKQPGYSWIE-VKTIMHAFVAGETSHPQLKEIHEFLESLSR 416
Query: 451 RLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICED 510
+++A GY PN VL DV D+EK+ L HSEKLA+AFG++ T+PG T+R+ KNLR+C D
Sbjct: 417 KMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGD 476
Query: 511 CHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
CH + S R+IVVRD RFHHF+DG+CSCG+YW
Sbjct: 477 CHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 144/287 (50%), Gaps = 42/287 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ ++ WTA+I GY G+ +S++++ MR+ G+ F + ++ AC ++
Sbjct: 98 LFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAA 157
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q HA ++ GF D+ VG+ ++ MY K G + + +VFD+MP+R+ VSW +I
Sbjct: 158 LELGRQFHA-YVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSII- 215
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
TG Q+ + +A+ FE+M AG++ + ++
Sbjct: 216 ------------------------------TGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245
Query: 188 LVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VGV+SAC+ G++ Y N + + +G + +V + +ID+ + G +D+A
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQ-----NYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
GM + +V + +++ +HG A ++ ++ E + G+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI 347
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/556 (42%), Positives = 351/556 (63%), Gaps = 18/556 (3%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LVF ++ K+ W ++I G++ G ++++ L+ M+ E P T+ + AC + +
Sbjct: 187 LVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRI 246
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ G+ I G +L + N M+ MYVKCG L +R++FD+M E+D+VSWT +I
Sbjct: 247 DLEFGRWA-CDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMI 305
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDY 185
YA GD ++A +F+ +P +D AW A+++ Y QN KP+EA+ F +Q + +
Sbjct: 306 DGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNE 365
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTL ++ACAQLG + W+ + G N + ++LIDMYSKCG ++ A +F
Sbjct: 366 VTLASTLAACAQLGAMDLGGWIHVYIKKQGIKL--NFHITTSLIDMYSKCGHLEKALEVF 423
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+++R+VF +S+MI G AMHG AAI LF M +T+ KPN VTF +L ACSH GL
Sbjct: 424 YSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVD 483
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YGV P + HYACMVD+LGRAGCLEEA++++EKMP+ P+ VWGALLGA
Sbjct: 484 EGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGA 543
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+I+ N E+A++A + L E + + G Y++LSNIYA AG WD VSR+R+ +K++GL+K P
Sbjct: 544 CRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEP 603
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE- 472
G S +E + G+IHEF GD +HP STEI L +++ R+++ GY + +L V +E
Sbjct: 604 GCSSIEVN-GIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYM 662
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L HSEKLA+A+GL+ P +RI+KNLR+C DCH S++ R+I++RD
Sbjct: 663 KEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRY 722
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF G CSC +YW
Sbjct: 723 RFHHFSGGNCSCMDYW 738
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 190/397 (47%), Gaps = 85/397 (21%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
VF+Q+ N + W LIR + + ++ M E P S+T + KA TEV
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ GQ IH ++ F SDL++ N++I Y
Sbjct: 146 SLLAGQAIHGM-VMKASFGSDLFISNSLIHFY---------------------------- 176
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
++ GD++SA +F+++ KD V+W +M++G+VQ P EA++ F+RM+ + V
Sbjct: 177 ---SSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRV 233
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+VGV+SACA+ +++ W C+ E +G N+++ +A++DMY KCGS++DA R+F
Sbjct: 234 TMVGVLSACAKRIDLEFGRWACDYIERNGIDI--NLILSNAMLDMYVKCGSLEDARRLFD 291
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE----------------------- 283
M+++++ S+++MI G+A G AA ++F M + +
Sbjct: 292 KMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAI 351
Query: 284 ---------TKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLG 323
TKPN VT L AC+ HV +K G+ + ++D+
Sbjct: 352 FRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYS 411
Query: 324 RAGCLEEALKM---VEKMPVEPNGGVWGALLGACQIH 357
+ G LE+AL++ VE+ V VW A++ +H
Sbjct: 412 KCGHLEKALEVFYSVERRDV----FVWSAMIAGLAMH 444
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 118 DVVSWTELIVAYA--NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
D S T+L A A + ++ A +F+++P + W ++ + + KP + + F +
Sbjct: 61 DPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQ 120
Query: 176 MQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M + + T VI A ++ + + + + FG +++ + ++LI YS
Sbjct: 121 MLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG--SDLFISNSLIHFYSS 178
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D AY +F + ++++ S++SMI GF G A+QLF M +PN VT +GV
Sbjct: 179 LGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGV 238
Query: 295 LTACS-HVGLK-----C-----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
L+AC+ + L+ C G+ + M+D+ + G LE+A ++ +KM
Sbjct: 239 LSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKM 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 108/283 (38%), Gaps = 81/283 (28%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI----------------- 48
R +F++++ K+ WT +I GY G + ++ M RE I
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346
Query: 49 ---------------GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
P TL++ AC ++ + LG IH I G + ++ +
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVY-IKKQGIKLNFHITTS 405
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+I MY KCG L + +VF + RDV W+
Sbjct: 406 LIDMYSKCGHLEKALEVFYSVERRDVFVWS------------------------------ 435
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
AM+ G + R AI+ F +MQ V+ + VT ++ AC+ G++ EG
Sbjct: 436 -AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVD---------EG 485
Query: 214 SGF----GPINNVVVGSA----LIDMYSKCGSIDDAYRIFVGM 248
F P+ VV GS ++D+ + G +++A + M
Sbjct: 486 RLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKM 528
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/555 (42%), Positives = 346/555 (62%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + ++ W ++I ++ G ++++ L+ M + + P T+ + AC + D
Sbjct: 193 VFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSD 252
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ +H+ I L + N M+ MY KCG + ++++FD+MPE+D+VSWT ++V
Sbjct: 253 FEFGRWVHS-YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLV 311
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV-ETDYV 186
YA G+ ++A G+F+ +P +D AW A+++ Y Q KP+EA+E F +Q + + D V
Sbjct: 312 GYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEV 371
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TLV +SACAQLG + W+ + G N + ++LIDMY KCG + A +F
Sbjct: 372 TLVSTLSACAQLGAMDLGGWIHVYIKKQGMKL--NCHLTTSLIDMYCKCGDLQKALMVFH 429
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK-- 304
+++++VF +S+MI G AMHG AI LF M + + KPN VTF +L ACSHVGL
Sbjct: 430 SVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEE 489
Query: 305 ----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YGV P HYACMVD+LGRAG LEEA++++EKMP+ P VWGALLGAC
Sbjct: 490 GRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGAC 549
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
IH N +A+ A + L ELEP G Y++LSNIYA AG WD VS +R+L++ GLKK PG
Sbjct: 550 TIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPG 609
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE-K 473
S +E D G++HEF GD +HP++ +I L +++ RL+ GY PN +L V +E+ K
Sbjct: 610 CSSIEVD-GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVK 668
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ L HSEKLA+AFGL++T +RI+KNLR+C DCH S++ REI++RD R
Sbjct: 669 EQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYR 728
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSC +YW
Sbjct: 729 FHHFREGHCSCMDYW 743
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 207/439 (47%), Gaps = 92/439 (20%)
Query: 1 MDSFPRL-----VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFT 54
+ FP L VF+Q+ + N + W LIR Y + S+ ++ M + P FT
Sbjct: 79 LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFT 138
Query: 55 LSALFKACTEVLDVSLGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
L KA +E+ ++ G+ H I LLG SD+++ N++I Y KCG LG +VF
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLG---SDVFILNSLIHFYAKCGELGLGYRVFV 195
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P RDVVSW +I A+ VQ P EA+E
Sbjct: 196 NIPRRDVVSWNSMITAF-------------------------------VQGGCPEEALEL 224
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F+ M+ V+ + +T+VGV+SACA+ ++ WV E + G ++ + +A++DMY
Sbjct: 225 FQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIG--ESLTLSNAMLDMY 282
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA---------------------------- 264
+KCGS++DA R+F M ++++ S+++M++G+A
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342
Query: 265 ---MHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACS-----------HVGLKCYGVS 309
G+ A++LF ++ ++T KP+ VT + L+AC+ HV +K G+
Sbjct: 343 AYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMK 402
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANH 369
+ ++D+ + G L++AL MV + VW A++ +H + + A
Sbjct: 403 LNCHLTTSLIDMYCKCGDLQKAL-MVFHSVERKDVFVWSAMIAGLAMHGH---GKDAIAL 458
Query: 370 LFELEPDKIG-NYIILSNI 387
+++ DK+ N + +NI
Sbjct: 459 FSKMQEDKVKPNAVTFTNI 477
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 126/255 (49%), Gaps = 31/255 (12%)
Query: 118 DVVSWTELIVAYANNG--DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
D S + LI A A + ++ A +F+++P + W ++ Y ++ P +++ F R
Sbjct: 66 DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125
Query: 176 MQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-GPINNVVVGS------A 227
M + + D T +I A ++L E+ G F G + V++GS +
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELE---------ELFTGKAFHGMVIKVLLGSDVFILNS 176
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI Y+KCG + YR+FV + +R+V S++SMI F G A++LF +M KPN
Sbjct: 177 LIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236
Query: 288 GVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
G+T +GVL+AC+ H ++ + S M+D+ + G +E+A ++ +
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFD 296
Query: 337 KMPVEPNGGVWGALL 351
KMP E + W +L
Sbjct: 297 KMP-EKDIVSWTTML 310
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF V+ K+ F+W+A+I G + GH KD+I+L+ M+ + + P + T + + AC+ V
Sbjct: 426 MVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVG 485
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS-WTEL 125
V G+ Q L+ G + M+ + + G L + ++ ++MP S W L
Sbjct: 486 LVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGAL 545
Query: 126 IVA 128
+ A
Sbjct: 546 LGA 548
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/518 (45%), Positives = 340/518 (65%), Gaps = 16/518 (3%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
MR + P +FT S + KAC ++ DV G+ IH LG F S+L++ N ++ +Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLG-FGSNLFLQNMILNLYGLCG 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+G + +F++MP+RD V+W +I A GD++ A G F +P K+ +WT+M++G+VQ
Sbjct: 60 EMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQ 119
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
KP EAI+ F +++ V + VT+V V++ACA LG + V E + SGF NV
Sbjct: 120 CGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFK--RNV 177
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V + LIDMY KCG +++A R+F M++R V S+S+MI G AMHG+A A+ LF +M+K
Sbjct: 178 HVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKL 237
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
KPNGVTFIG+L ACSH+GL YGV P +HY C+VDL RAG LEE
Sbjct: 238 GVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEE 297
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A + + MP++PNG VWGALLG C++H+N ++A+ A HL EL+P G Y+++SNIYA
Sbjct: 298 AHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAE 357
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
A W+D +RVR+L+K G+KK G+S + + GV+HEF AGD THP + +I + LL
Sbjct: 358 AERWEDAARVRKLMKDRGVKKTSGWSSITVN-GVVHEFVAGDQTHPQAEDICKIWDKLLV 416
Query: 451 RLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICED 510
+++ GY P VL D+ ++EK++ L HSEKLA+ FGL+TT G +RIMKNLR+CED
Sbjct: 417 KMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCED 476
Query: 511 CHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
CH + S ++ REI+VRD RFH F+DG+CSC ++W
Sbjct: 477 CHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 34/259 (13%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F ++ KN WT++I G++ G ++I L+ + E + P T+ ++ AC ++ D+
Sbjct: 99 FLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDL 158
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+ +H + GF +++V NT+I MYVKCG L +R+VF EM ER VVSW+ +I
Sbjct: 159 DLGRIVHEYST-KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAG 217
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
A +G E A LF+E M GV+ + VT
Sbjct: 218 LAMHGQAEEALCLFSE-------------------------------MIKLGVKPNGVTF 246
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+G++ AC+ +G+I + + +G I + ++D++S+ G +++A+ + M
Sbjct: 247 IGLLHACSHMGLIDEGRRFFA-SMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 249 KQR-NVFSYSSMILGFAMH 266
+ N + +++ G +H
Sbjct: 306 PIKPNGVVWGALLGGCKVH 324
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 348/555 (62%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +K K+ W ++I G++ +G ++ L+ M E + T+ + AC ++ D
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRD 249
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++ I +L + N M+ MY KCG + ++++FD M E+D V+WT ++
Sbjct: 250 LEFGRRV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 308
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYV 186
YA + D E+A + N +P KD VAW A+++ Y QN KP EA+ F +Q ++ + +
Sbjct: 309 GYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQI 368
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TLV +SACAQ+G ++ W+ + +G N V SALI MYSKCG ++ A +F
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKNGIK--MNFYVTSALIHMYSKCGDLEKAREVFN 426
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+++R+VF +S+MI G AMHG A+ +F M + KPNGVTF V ACSH GL
Sbjct: 427 SVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 486
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P HYAC+VD+LGR+G LE+A+K +E MP+ P+ VWGALLGAC
Sbjct: 487 AESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 546
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N +A++A L ELEP G +++LSNIYA +G WD+VS +R+ +++TGLKK PG
Sbjct: 547 KIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPG 606
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE-K 473
S +E D G+IHEF +GD HP S ++ L +++++L+++GY+P + VL + +EE K
Sbjct: 607 CSSIEID-GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMK 665
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ L HSEKLA+ +GL++T +R++KNLR+C DCH SQ+ REI+VRD R
Sbjct: 666 EQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYR 725
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G+CSC ++W
Sbjct: 726 FHHFRNGQCSCNDFW 740
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 189/402 (47%), Gaps = 86/402 (21%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFKA 61
+ R VF+++ N F W LIR Y SI + M P +T L KA
Sbjct: 83 YARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKA 142
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
EV +SLGQ +H I SD++V N++I Y CG
Sbjct: 143 AAEVSSLSLGQSLHGMAIK-SAVGSDVFVANSLIHCYFSCG------------------- 182
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
D++SA +F + KD V+W +M+ G+VQ P +A+E F++M+ V
Sbjct: 183 ------------DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 230
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ +VT+VGV+SACA++ +++ VC E + N+ + +A++DMY+KCGSI+DA
Sbjct: 231 KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDA 288
Query: 242 YRIFVGMKQRNVFSYSSMILGFAM-------------------------------HGRAH 270
R+F M++++ ++++M+ G+A+ +G+ +
Sbjct: 289 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPN 348
Query: 271 AAIQLFGDM-VKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACM 318
A+ +F ++ ++ K N +T + L+AC+ VG +K G+ + + +
Sbjct: 349 EALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSAL 408
Query: 319 VDLLGRAGCLEEALKM---VEKMPVEPNGGVWGALLGACQIH 357
+ + + G LE+A ++ VEK V VW A++G +H
Sbjct: 409 IHMYSKCGDLEKAREVFNSVEKRDV----FVWSAMIGGLAMH 446
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE--T 183
I A ++ +E A +F+E+P + W ++ Y P +I F M + +
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T +I A A++ + + +A S G ++V V ++LI Y CG +D A +
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVG--SDVFVANSLIHCYFSCGDLDSACK 189
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F +K+++V S++SMI GF G A++LF M + K + VT +GVL+AC+ +
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRD 249
Query: 304 KCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G V+ + M+D+ + G +E+A ++ + M E + W +L
Sbjct: 250 LEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLD 308
Query: 353 ACQIHRNPEIAQIAANHL 370
I + E A+ N +
Sbjct: 309 GYAISEDYEAAREVLNAM 326
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/553 (41%), Positives = 346/553 (62%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ N F++ A+IRG+ + + Y +R+G+ P + T L K+CT++
Sbjct: 75 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S+G Q H I+ GF D+YV N+++ MY G + +F M DVVSWT +I
Sbjct: 135 ISMGSQAHGH-IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIR 193
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ GD+ESA LF+++P K+ V W+ M++GY QN +A+E F+ +Q GV +
Sbjct: 194 GFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETV 253
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V VIS+CA LG ++ + +G N+++G+AL+DMY++CGSID A +F
Sbjct: 254 MVSVISSCAHLGALELGERAHDYVVKNGMTL--NLILGTALVDMYARCGSIDKAVWVFED 311
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R+ S++++I G AMHG + +++ F MV+ P +TF VL+ACSH GL
Sbjct: 312 LPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERG 371
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + V P +HY CMVDLLGRAG LEEA + V KMPV+PN VWGALLGAC+
Sbjct: 372 FQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACR 431
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N EI + L +L P G Y++LSNIYA+A W+ V+ +R+++K GLKK PG+
Sbjct: 432 IHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGH 491
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D G +H+F GD +HP +I++ ++L R++A GY+ N L+D+ +EEK+
Sbjct: 492 SLIELD-GRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKES 550
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFG++ + G +RI+KNLR+CEDCH S+V GRE++VRD RFH
Sbjct: 551 ALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFH 610
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 611 HFRQGLCSCMDYW 623
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q+ KN W+ +I GY H ++ L+ ++ +G+ + ++ +C +
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG++ H ++ G T +L +G ++ MY +CG + + VF+++PERD +SWT L
Sbjct: 265 GALELGERAH-DYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTAL 323
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G ++E LK YF M AG+
Sbjct: 324 IAGLAMHG--------YSERSLK-----------------------YFATMVEAGLTPRD 352
Query: 186 VTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T V+SAC+ G+++ + E + P + ++D+ + G +++A R
Sbjct: 353 ITFTAVLSACSHGGLVERGFQIFESMKRDHRVEP--RLEHYGCMVDLLGRAGKLEEAERF 410
Query: 245 FVGM 248
+ M
Sbjct: 411 VLKM 414
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/553 (42%), Positives = 342/553 (61%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + +++ + RGY+ ++ I +Y M + + P FT L +AC
Sbjct: 76 VFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYA 135
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA +L GF +D + N +I MYV L +R+VFD MP+RDVVSWT LI
Sbjct: 136 IEEGKQIHAH-VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLIT 194
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ G ++ A +F +P ++ V+W AM+ YVQ+ + EA F+RM+ V D
Sbjct: 195 GYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFV 254
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++SAC LG ++ W+ E SG + + + +IDMY KCG ++ A +F
Sbjct: 255 AASMLSACTGLGALEQGKWIHGYIEKSGIEL--DSKLATTVIDMYCKCGCLEKASEVFNE 312
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ Q+ + S++ MI G AMHG+ AAI+LF +M + P+G+TF+ VL+AC+H GL
Sbjct: 313 LPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEG 372
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ G+ P +H+ CMVDLLGRAG LEEA K++ +MPV P+ GV GAL+GAC+
Sbjct: 373 KHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACR 432
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ + + ELEP G Y++L+N+YASAG W+DV++VR+L+ G+KK PG+
Sbjct: 433 IHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGF 492
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + GV EF AG HP + EI L ++L+ +++ GY P+ VL+D+ +EEK+
Sbjct: 493 SMIESESGV-DEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKEN 551
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGLL T PG T+RI KNLRIC DCH S+V REI++RD RFH
Sbjct: 552 PLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFH 611
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 612 HFRMGGCSCKDYW 624
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + +N W A+I Y+ L ++ +L+ MR E + F +++ ACT +
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH I G D + T+I MY KCG L + +VF+E+P++ + SW +
Sbjct: 266 GALEQGKWIHG-YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 324
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G E+ AIE F+ M+ V D
Sbjct: 325 IGGLAMHGKGEA-------------------------------AIELFKEMEREMVAPDG 353
Query: 186 VTLVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+T V V+SACA G+++ Y ++ E+ G P + ++D+ + G +++A
Sbjct: 354 ITFVNVLSACAHSGLVEEGKHYFQYMTEVL---GLKP--GMEHFGCMVDLLGRAGLLEEA 408
Query: 242 YRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
++ M + +++ +HG Q+ +++ E +G
Sbjct: 409 RKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 456
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 53/333 (15%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A + +GD+ A +F+++P D + + GY++ R I + RM + V + T
Sbjct: 63 AISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFT 122
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFG-----------------------------P 218
+I AC I+ + GFG P
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+VV ++LI YS+ G +D A +F M +RN S+++MI + R H A LF
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 279 MVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGC 327
M + +L+AC+ +G ++ G+ + ++D+ + GC
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 302
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF-ELE-----PDKIGNY 381
LE+A ++ ++P + W ++G +H E AA LF E+E PD I
Sbjct: 303 LEKASEVFNELP-QKGISSWNCMIGGLAMHGKGE----AAIELFKEMEREMVAPDGITFV 357
Query: 382 IILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+LS S + + + + ++ GLK PG
Sbjct: 358 NVLSACAHSGLVEEGKHYFQYMTEVLGLK--PG 388
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/550 (42%), Positives = 347/550 (63%), Gaps = 22/550 (4%)
Query: 13 KYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL 70
+ +NP F WTA+I G+ L+G + +++ Y M +G+ P +FT S++ K C +
Sbjct: 87 RTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEP 142
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +H+Q + LG F SDLYV ++ +Y + G + ++++FD MPE+ +VS T ++ YA
Sbjct: 143 GKALHSQAVKLG-FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYA 201
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+G++++A LF+ + +D V W M+ GY QN P EA+ F RM A + + VT++
Sbjct: 202 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 261
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+SAC QLG ++ WV E +G NV VG+AL+DMYSKCGS++DA +F +
Sbjct: 262 VLSACGQLGALESGRWVHSYIENNGIQ--FNVHVGTALVDMYSKCGSLEDARLVFDKIDD 319
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC----- 305
++V +++SMI+G+AMHG + A+QLF M + P +TFIG+L+AC H G
Sbjct: 320 KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 379
Query: 306 -------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YG+ P +HY CMV+LLGRAG +E+A ++V+ M +EP+ +WG LLGAC++H
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
+ + L + G YI+LSNIYA+ G WD V+R+R ++K +G+KK PG S +
Sbjct: 440 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 499
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E + V HEF AG L HP EI L ++ L++ GY P VL+D+ + EK+R L
Sbjct: 500 EVNNKV-HEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLE 558
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AFGL+ T PG T++I+KNLR+C DCH S++ GR+IVVRD RFHHF
Sbjct: 559 VHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFV 618
Query: 539 DGKCSCGNYW 548
+G CSCG+YW
Sbjct: 619 NGSCSCGDYW 628
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 48/271 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ ++ ++ W +I GY G +++ L+ M + P T+ ++ AC ++
Sbjct: 210 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQL 269
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ I G +++VG ++ MY KCG L +R VFD++ ++DVV+W +
Sbjct: 270 GALESGRWVHSY-IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 328
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV YA +G F++ EA++ F+ M G+
Sbjct: 329 IVGYAMHG--------FSQ-----------------------EALQLFKSMCRMGLHPTN 357
Query: 186 VTLVGVISACAQLGVIKYANWVCE-------IAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+T +G++SAC G WV E + + G P + ++++ + G +
Sbjct: 358 ITFIGILSACGHSG------WVTEGWDIFNKMKDEYGIEP--KIEHYGCMVNLLGRAGHV 409
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
+ AY + M + + + +++ +HG+
Sbjct: 410 EQAYELVKNMNIEPDPVLWGTLLGACRLHGK 440
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+YA+ G ++ + LF WTA++ G+ +A+ ++ +M GVE + T
Sbjct: 71 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 130
Query: 188 LVGVISAC----------------------AQLGVIK-YANWVCEIAEGSGFG--PINNV 222
++ C + G++ YA ++ F P ++
Sbjct: 131 FSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSL 190
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V +A++ Y+K G +D A +F GM++R+ ++ MI G+ +G + A+ LF M+K
Sbjct: 191 VSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA 250
Query: 283 ETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
+ KPN VT + VL+AC +G ++ G+ + +VD+ + G LE+A
Sbjct: 251 KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 310
Query: 332 LKMVEKM 338
+ +K+
Sbjct: 311 RLVFDKI 317
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+ G +D + +F + +VF ++++I G A+ G A+ + M+ +PN TF
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 292 IGVLTACS-------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+L C H G ++D+ R G + A ++ + MP
Sbjct: 132 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 186
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/550 (42%), Positives = 341/550 (62%), Gaps = 17/550 (3%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V N F W ++I G +++ + SMR+ + P T K+C+ +LD+ G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+Q H Q ++ G F DL+V + ++ MY KCG L +R +FDE+ R++VSWT +I Y
Sbjct: 96 RQAHQQALIFG-FEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 154
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVG 190
N D A +F+ + +D ++W +++ Y QN E++E F RM G + + VTL
Sbjct: 155 NDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSA 214
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+ ACA G + C + G +NV VG+++IDMY KCG ++ A + F M++
Sbjct: 215 VLLACAHSGSQRLGK--CIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 272
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
+NV S+S+M+ G+ MHG A A+++F +M KPN +TF+ VL ACSH GL
Sbjct: 273 KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 332
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
+ V P +HY CMVDLLGRAG L+EA +++ M + P+ VWGALLGAC++H+
Sbjct: 333 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 392
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N ++ +I+A LFEL+P G Y++LSNIYA AG W+DV R+R L+K +GL K PG+S L
Sbjct: 393 NVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS-L 451
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
+G +H F GD HP +I + L L +LQ GY P++ SVL+DV EEK+ +L
Sbjct: 452 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 511
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AFG++ T PG T+ I+KNLR+C DCH + S+++ REIVVRD+ RFHHF+
Sbjct: 512 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFR 571
Query: 539 DGKCSCGNYW 548
DG CSCG+YW
Sbjct: 572 DGLCSCGDYW 581
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 131/302 (43%), Gaps = 68/302 (22%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYI-------------------------------LQGHLK 34
R +F+++ ++N WT++I GY+ G
Sbjct: 131 RTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMST 190
Query: 35 DSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
+S+ ++ M ++G I + TLSA+ AC LG+ IH Q I + G S+++VG +
Sbjct: 191 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTS 249
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+I MY KCG + +RK FD M E++V SW+ ++ Y +G
Sbjct: 250 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHG-------------------- 289
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+EA+E F M AGV+ +Y+T V V++AC+ G+++ W A
Sbjct: 290 -----------HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE-EGWHWFKAMS 337
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
F V ++D+ + G + +A+ + GMK R F +LG R H +
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC---RMHKNV 394
Query: 274 QL 275
L
Sbjct: 395 DL 396
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/555 (40%), Positives = 347/555 (62%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +K K+ W ++I G++ +G ++ L+ M E + T+ + AC ++ +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+ I +L + N M+ MY KCG + ++++FD M E+D V+WT ++
Sbjct: 248 LEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYV 186
YA + D E+A + N +P KD VAW A+++ Y QN KP EA+ F +Q ++ + +
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TLV +SACAQ+G ++ W+ + G N V SALI MYSKCG ++ + +F
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIR--MNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+++R+VF +S+MI G AMHG + A+ +F M + KPNGVTF V ACSH GL
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P HYAC+VD+LGR+G LE+A+K +E MP+ P+ VWGALLGAC
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N +A++A L ELEP G +++LSNIYA G W++VS +R+ +++TGLKK PG
Sbjct: 545 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 604
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE-K 473
S +E D G+IHEF +GD HP S ++ L +++++L+++GY+P + VL + +EE K
Sbjct: 605 CSSIEID-GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 663
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ L HSEKLA+ +GL++T +R++KNLR+C DCH SQ+ REI+VRD R
Sbjct: 664 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 723
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G+CSC ++W
Sbjct: 724 FHHFRNGQCSCNDFW 738
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 188/401 (46%), Gaps = 85/401 (21%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKAC 62
+ R VF+++ N F W LIR Y SI + M E P +T L KA
Sbjct: 82 YARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAA 141
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
EV +SLGQ +H + SD++V N++I Y CG
Sbjct: 142 AEVSSLSLGQSLHGMAVK-SAVGSDVFVANSLIHCYFSCG-------------------- 180
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D++SA +F + KD V+W +M+ G+VQ P +A+E F++M+ V+
Sbjct: 181 -----------DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+VT+VGV+SACA++ +++ VC E + N+ + +A++DMY+KCGSI+DA
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAK 287
Query: 243 RIFVGMKQRNVFSYSSMILGFAM-------------------------------HGRAHA 271
R+F M++++ ++++M+ G+A+ +G+ +
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 272 AIQLFGDM-VKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMV 319
A+ +F ++ ++ K N +T + L+AC+ VG +K +G+ + + ++
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 320 DLLGRAGCLE---EALKMVEKMPVEPNGGVWGALLGACQIH 357
+ + G LE E VEK V VW A++G +H
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDV----FVWSAMIGGLAMH 444
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 15/257 (5%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI-EYFERMQYAGVETD 184
+ A ++ +E A +F+E+P + AW ++ Y P +I + + + + +
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T +I A A++ + + +A S G ++V V ++LI Y CG +D A ++
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG--SDVFVANSLIHCYFSCGDLDSACKV 188
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F +K+++V S++SMI GF G A++LF M + K + VT +GVL+AC+ +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 305 CYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G V+ + M+D+ + G +E+A ++ + M E + W +L
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Query: 354 CQIHRNPEIAQIAANHL 370
I + E A+ N +
Sbjct: 308 YAISEDYEAAREVLNSM 324
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 340/523 (65%), Gaps = 18/523 (3%)
Query: 4 FPRLVFEQVKYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
+ + +FE V+ + P F+W + ++ D+I L+ +R+ + P +FT S++ +A
Sbjct: 78 YAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRA 137
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C +LD+S G+ +H + GF S+LY+ N ++ +Y CG +G +R +F++MP+RDVV+
Sbjct: 138 CLNLLDLSNGRILHG-VVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVT 196
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I GD E A LF+ +P ++ +WT+M+ GYVQ K +EAI F +M+ AGV
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + VT+V V++ACA LG + + E + GF NV + + LIDMY KCG +++A
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK--RNVRISNTLIDMYVKCGCLEEA 314
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R V S+S+MI G AMHGRA A++LF DM + +PNGVTFIG+L ACSH+
Sbjct: 315 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY CMVDLL RAG L EA + + MP++PNG VWGA
Sbjct: 375 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 434
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC++H+N E+A+ A HL EL+P G Y++LSNIYA AG W+D +RVR+ +K +
Sbjct: 435 LLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQV 494
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG+S + D GV+HEF AG+ +HP++ +I Q +LL+ ++ GY PN VL D+
Sbjct: 495 KKTPGWSSITVD-GVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIE 553
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
+ EK + + HSEKLAL FGL+ T +RIMKNLRICEDCH
Sbjct: 554 EGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCH 596
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/559 (42%), Positives = 345/559 (61%), Gaps = 21/559 (3%)
Query: 7 LVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
LVFE ++ N + W +++ G++ G+ ++ L+ MR EG+ P + T+ ++ AC +
Sbjct: 296 LVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAK 355
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++++LG+++ I +L V N I M+VKCG + +R +FD M +RDVVSWT
Sbjct: 356 TMNLTLGRKV-CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTT 414
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY--AGVE 182
+I YA + A +F+ +P KD AW +++GY Q+ +P+EA+ F +Q +G
Sbjct: 415 IIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGAR 474
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D VTL+ +SACAQLG + W+ + N+ ++LIDMYSK G ++ A
Sbjct: 475 PDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNL--ATSLIDMYSKSGDVEKAI 532
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + ++VF +S+MI G AMHGR AAI+LF DM +T+ KPN VTF +L ACSH G
Sbjct: 533 EVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSG 592
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YGV P T HY+CMVD+LGRAG LEEALK +E MP+ P+ VWGAL
Sbjct: 593 LVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGAL 652
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC IH N E+A+ A + L E+EP G Y++LSN+YA G W+ VS +R+ ++ +GLK
Sbjct: 653 LGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLK 712
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G S +E D G +HEF GD HP S +I L +++ RL++ GY N +L V +
Sbjct: 713 KETGCSSIEID-GTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEE 771
Query: 471 EE-KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EE K++ L HSEK+A+AFGL+ +RI+KNLR+C DCH S+V GR+IV+R
Sbjct: 772 EEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLR 831
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF G CSC +YW
Sbjct: 832 DRYRFHHFSGGHCSCQDYW 850
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 181/407 (44%), Gaps = 82/407 (20%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKAC 62
+ R VF+Q+ N + W LIR S+ ++ M + GP FT L KA
Sbjct: 191 YARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAV 250
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVV 120
E +G+ +H I F D++V N++I Y CG L + VF+ E +D+V
Sbjct: 251 AERRCFLVGKAVHGMAIKT-SFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIV 309
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +MVTG+VQ P +A++ FERM+ G
Sbjct: 310 SW-------------------------------NSMVTGFVQGGYPDKALDLFERMRNEG 338
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + VT+V V+SACA+ + VC+ + + + N+ V +A IDM+ KCG ++
Sbjct: 339 VHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEM--MMNLNVCNATIDMFVKCGEVEI 396
Query: 241 AYRIFVGMKQRNVFSYSSMILGFA-------------------------------MHGRA 269
A +F M++R+V S++++I G+A GR
Sbjct: 397 ARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRP 456
Query: 270 HAAIQLFGD--MVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYA 316
A+ +F + + K+ +P+ VT + L+AC+ +G +K + + +
Sbjct: 457 KEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLAT 516
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
++D+ ++G +E+A+++ + + VW A++ +H E A
Sbjct: 517 SLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGRGEAA 562
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEM 114
ALF+ CT + +QIHAQ +L D Y + + F L +RKVFD++
Sbjct: 144 ALFQQCTSFKQL---KQIHAQ-MLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQI 199
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P+ ++ SW LI A A + D P +++ F
Sbjct: 200 PQPNLYSWNILIRALATSSD-------------------------------PIQSVLVFI 228
Query: 175 RMQY-AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
RM + + + T +I A A+ V +A + FG ++V V ++LI Y+
Sbjct: 229 RMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFG--DDVFVLNSLIHFYA 286
Query: 234 KCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
CG +D AY +F + +++ S++SM+ GF G A+ LF M PN VT
Sbjct: 287 SCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTM 346
Query: 292 IGVLTACS 299
+ V++AC+
Sbjct: 347 VSVMSACA 354
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 36/286 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACT 63
R +F+ + K+ W LI GY G K++++++ ++ + G P TL + AC
Sbjct: 429 RDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACA 488
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + +G+ IH I + + ++I MY K G + + +VF + +DV W+
Sbjct: 489 QLGAMDIGEWIHGY-IKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
AM+ G + + AIE F MQ V+
Sbjct: 548 -------------------------------AMIAGLAMHGRGEAAIELFLDMQETQVKP 576
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ VT ++ AC+ G++ + + E +G + S ++D+ + G +++A +
Sbjct: 577 NSVTFTNLLCACSHSGLVDEGKRLFDEME-RVYGVVPKTKHYSCMVDVLGRAGHLEEALK 635
Query: 244 IFVGMKQRNVFSYSSMILGF-AMHGRAHAAIQLFGDMVKTETKPNG 288
GM S +LG +HG A + +++ E +G
Sbjct: 636 FIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHG 681
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 351/558 (62%), Gaps = 16/558 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ N F+W +IRGY ++++ LY M + ++T L KAC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + QQIHA I +G F S++Y N+++ +Y K G + +R +FD++ +RD VSW
Sbjct: 129 SSMSALEETQQIHAHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I Y G++E A +FN +P ++ ++WT+M++G V KP+EA+ F RMQ AG++
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D V LV + ACA LGV+ W+ + + ++G LIDMY+KCG +++A
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI--DPILGCVLIDMYAKCGDLEEAI 305
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+++ V +++MI G+A+HGR A++ F M +PN +TF G+LTACSH G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G PS +HY CMVDLLGRAG L+EA +++E MPV+PN +WGAL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC IH N E+ + L +++P G YI L++I+A+AG W+ +RVRR +K G+
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S + + G HEF AGD +HP EI L +++RL+ +GY+P L +L D+ D
Sbjct: 486 KLPGCSVISVN-GTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLED 544
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK+ + HSEKLA+ FGL++T PG T+RI+KNLR+CEDCH + S+V REI++RD
Sbjct: 545 KEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRD 604
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F+DG C+CG+YW
Sbjct: 605 RTRFHLFKDGNCTCGDYW 622
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 51/322 (15%)
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQT+ L S++ + G +K G + DE+P ++++ A N+G +
Sbjct: 19 AQTLHLLQRCSNMEELRQIHGQMLKTGL------ILDEIPASKLLAF----CASPNSGSL 68
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A +F+ + + W M+ GY + +P EA+ + M Y V + T ++ AC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 196 AQLGVIKYANWVCEIAEGSGFGP-----------------------------INNVVVGS 226
+ + ++ + GFG + V +
Sbjct: 129 SSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWN 188
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
++ID Y+KCG I+ AY IF M +RN+ S++SMI G G+ A+ LF M K
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248
Query: 287 NGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+ V + L AC+ +G +K + + ++D+ + G LEEA+++
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308
Query: 336 EKMPVEPNGGVWGALLGACQIH 357
KM E VW A++ IH
Sbjct: 309 RKME-EKGVSVWTAMISGYAIH 329
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/558 (41%), Positives = 345/558 (61%), Gaps = 20/558 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ RLVF Q+ F ++IRGY + + +I Y M +G+ P FT +LFK+C
Sbjct: 30 YARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG 89
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+Q+H + LG F SD Y+ NT++ MY CG L +RKVFD+M + VVSW
Sbjct: 90 VLCE---GKQLHCHSTKLG-FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWA 145
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKV-AWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I AYA A LF + + + W M+ G+V+++ EA+ F MQ +GV+
Sbjct: 146 TMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVK 205
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D VT+ ++ AC LG ++ W+ E +V +G+AL+DMY+KCGSI+ A
Sbjct: 206 GDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEV--DVALGTALVDMYAKCGSIESAM 263
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M +++V +++++I+G AM G+ A++LF +M +E KP+ +TF+GVL ACSH G
Sbjct: 264 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 323
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG+ PS +HY CMVD+LGRAG + EA +++ MP+ P+ V L
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+IH N +A+ AA L EL+P G Y++LSNIY+S W+ ++R L+ +K
Sbjct: 384 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 443
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S +E GV+HEF GD++HP S+EI + L D++ RL++ GY P+ VL+D+ +
Sbjct: 444 KPPGCSAIEVG-GVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK+ L HSEKLA+AFGLL+T+PG +R++KNLR+C DCH M S+V REI+VRD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF G CSC ++W
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 49/267 (18%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A ++G + A +FN++P +++ GY PR+AI +++ M G++ D T
Sbjct: 21 ALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFT 80
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ +C L K + + G ++ + + L++MYS CG + A ++F
Sbjct: 81 FPSLFKSCGVLCEGKQLH-----CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDK 135
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQ--------------------------------L 275
M ++V S+++MI +A H AI+ L
Sbjct: 136 MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSL 195
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVG-------LKCY----GVSPSTDHYACMVDLLGR 324
F +M + K + VT +L AC+H+G L Y + +VD+ +
Sbjct: 196 FNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAK 255
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALL 351
G +E A+++ ++MP E + W AL+
Sbjct: 256 CGSIESAMRVFQEMP-EKDVMTWTALI 281
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/550 (42%), Positives = 346/550 (62%), Gaps = 22/550 (4%)
Query: 13 KYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL 70
+ +NP F WTA+I G+ L+G + +++ Y M +G+ P +FT S++ K C +
Sbjct: 34 RTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEP 89
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +H+Q + LG F SDLYV ++ +Y + G + ++++FD MPE+ +VS T ++ YA
Sbjct: 90 GKALHSQAVKLG-FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYA 148
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+G++++A LF+ + +D V W M+ GY QN P EA+ F RM A + + VT++
Sbjct: 149 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 208
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+SAC QLG ++ WV E +G NV VG+AL+DMYSKCGS++DA +F +
Sbjct: 209 VLSACGQLGALESGRWVHSYIENNGIQ--FNVHVGTALVDMYSKCGSLEDARLVFDKIDD 266
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC----- 305
++V +++SMI+G+AM G + A+QLF M + P +TFIG+L+AC H G
Sbjct: 267 KDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 326
Query: 306 -------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YG+ P +HY CMV+LLGRAG +E+A ++V+ M +EP+ +WG LLGAC++H
Sbjct: 327 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 386
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
+ + L + G YI+LSNIYA+ G WD V+R+R ++K +G+KK PG S +
Sbjct: 387 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 446
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E + V HEF AG L HP EI L ++ L++ GY P VL+D+ + EK+R L
Sbjct: 447 EVNNKV-HEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLE 505
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AFGL+ T PG T++I+KNLR+C DCH S++ GR+IVVRD RFHHF
Sbjct: 506 VHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFV 565
Query: 539 DGKCSCGNYW 548
+G CSCG+YW
Sbjct: 566 NGSCSCGDYW 575
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 48/271 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ ++ ++ W +I GY G +++ L+ M + P T+ ++ AC ++
Sbjct: 157 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQL 216
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ I G +++VG ++ MY KCG L +R VFD++ ++DVV+W +
Sbjct: 217 GALESGRWVHSY-IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 275
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV YA + G+ Q EA++ F+ M G+
Sbjct: 276 IVGYA--------------------------MXGFSQ-----EALQLFKSMCRMGLHPTN 304
Query: 186 VTLVGVISACAQLGVIKYANWVCE-------IAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+T +G++SAC G WV E + + G P + ++++ + G +
Sbjct: 305 ITFIGILSACGHSG------WVTEGWDIFNKMKDEYGIEP--KIEHYGCMVNLLGRAGHV 356
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
+ AY + M + + + +++ +HG+
Sbjct: 357 EQAYELVKNMNIEPDPVLWGTLLGACRLHGK 387
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 36/255 (14%)
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
V +L +YA+ G ++ + LF WTA++ G+ +A+ ++ +M
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 180 GVETDYVTLVGVISAC----------------------AQLGVIK-YANWVCEIAEGSGF 216
GVE + T ++ C + G++ YA ++ F
Sbjct: 70 GVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 217 G--PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
P ++V +A++ Y+K G +D A +F GM++R+ ++ MI G+ +G + A+
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLG 323
LF M+K + KPN VT + VL+AC +G ++ G+ + +VD+
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 324 RAGCLEEALKMVEKM 338
+ G LE+A + +K+
Sbjct: 250 KCGSLEDARLVFDKI 264
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+ G +D + +F + +VF ++++I G A+ G A+ + M+ +PN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 292 IGVLTACS-------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+L C H G ++D+ R G + A ++ + MP
Sbjct: 79 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 350/558 (62%), Gaps = 16/558 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ N F+W +IRGY ++++ LY M + ++T L KAC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + QQIHA I +G F S++Y N+++ +Y K G + +R +FD++ +RD VSW
Sbjct: 129 SSMSASEETQQIHAHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I Y G++E A +FN +P ++ ++WT+M++G V KP+EA+ F RMQ AG++
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D V LV + ACA LGV+ W+ + + ++G LIDMY+KCG +++A
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI--DPILGCVLIDMYAKCGDLEEAI 305
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+++ V +++MI G+A+HGR A++ F M +PN +TF G+LTACSH G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G PS +HY CMVDLLGRAG L+EA +++E MPV+PN +WGAL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC IH N E+ + L +++P G YI L++I+A+AG W+ +RVRR +K G+
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S + + G HEF AGD +HP EI L +++RL+ +GY+P L +L D+ D
Sbjct: 486 KLPGCSVISVN-GTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLED 544
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK+ + HSEKLA+ FGL++T PG T+RI+KNLR+CEDCH + S+V REI++RD
Sbjct: 545 KEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRD 604
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F+DG C+CG+YW
Sbjct: 605 RTRFHLFKDGNCTCGDYW 622
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQT+ L S++ + G +K G + DE+P ++++ A N+G +
Sbjct: 19 AQTLHLLQRCSNMEELRQIHGQMLKTGL------ILDEIPASKLLAF----CASPNSGSL 68
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A +F+ + + W M+ GY + +P EA+ + M Y V + T ++ AC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 196 AQLGV-------------------IKYANWVCEIAEGSG--------FGPIN--NVVVGS 226
+ + I N + + SG F ++ + V +
Sbjct: 129 SSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWN 188
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
++ID Y+KCG I+ AY IF M +RN+ S++SMI G G+ A+ LF M K
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248
Query: 287 NGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+ V + L AC+ +G +K + + ++D+ + G LEEA+++
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308
Query: 336 EKMPVEPNGGVWGALLGACQIH 357
KM E VW A++ IH
Sbjct: 309 RKME-EKGVSVWTAMISGYAIH 329
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/560 (42%), Positives = 342/560 (61%), Gaps = 23/560 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++++ N F+W ++R YI + ++ LY M + +GP ++T + +AC L
Sbjct: 85 IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 144
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G++IH +L GF SD+YV NT+I MY CG + +RK+FDE P D VSW ++
Sbjct: 145 EFGGKEIHDH-VLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 203
Query: 128 AYANNGDM---ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
Y GDM A LFNE+ KD V+W+A+++GY QN EA+ F M G+ D
Sbjct: 204 GYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 263
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI----DMYSKCGSIDD 240
V +V V+SACA L ++K + + G N+ +ALI DMY KCG +++
Sbjct: 264 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNL--QNALIHMYSDMYMKCGCVEN 321
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F GM+++ V S++++I+G A++G ++ +F +M PN +TF+GVL AC H
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 381
Query: 301 VGL----KCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+GL +C+ G+ P+ HY CMVDLLGRAG L EA K++E MP+ P+ WG
Sbjct: 382 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 441
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+ H + E+ + L EL+PD G +++LSNI+AS G W+DV VR ++K G
Sbjct: 442 ALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 501
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+ K PG S +E + GV+HEF AGD THP +++ L ++ RL+ +GY P+ V D+
Sbjct: 502 VVKTPGCSLIEAN-GVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDI 560
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK+ L HSEKLA+AFGLLT SP +RIMKNLRIC DCH S+ REIVV
Sbjct: 561 DEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVV 620
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFH+F++G CSC +YW
Sbjct: 621 RDRHRFHYFKEGACSCMDYW 640
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 342/563 (60%), Gaps = 20/563 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R +F++ ++ + +I+GY + ++ L+ M+ GI P FT ALF C
Sbjct: 163 NLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVC 222
Query: 63 TEVLDVSLGQQIHAQTIL-LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVV 120
+ + + ++G+QIHAQ L S++ + + ++ MY KCG + + +VF M +
Sbjct: 223 SVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAA 282
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W+ ++ YA G++ A LFN + +D ++WTAM++GY Q + EA+E F+ M+ G
Sbjct: 283 AWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALG 342
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ D VTLV V+SACA+LG + + E F N ++ +A++DMY+KCGSID
Sbjct: 343 IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN--QNTILTAAVMDMYAKCGSID 400
Query: 240 DAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
A IF VG + F ++SMI G A HG AI +F +++ T KP+ VTF+GVL A
Sbjct: 401 SALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCA 460
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C H GL YG+ P +HY CMVDLLGR GCLEEA +V+KMP E N
Sbjct: 461 CGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSV 520
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W ALL AC+ H N +I +IA L E+E Y++LSNI A A W++ +VR++++
Sbjct: 521 IWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVME 580
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G++K PG+S++E G IH F A D +HP EI+ L D+ RL++ GY PN V+
Sbjct: 581 DHGIRKPPGWSYIELG-GAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVM 639
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+D+ +EEK+ ++ HSEKLALAFGL+ SP T+RI+KNLRIC DCH S++ GRE
Sbjct: 640 FDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGRE 699
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I VRD MRFHHF++G CSC ++W
Sbjct: 700 ITVRDTMRFHHFRNGSCSCMDFW 722
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 194/395 (49%), Gaps = 28/395 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
RL+F Q+ N F+W +IRGY + +++I LY SM +GI P + FT L +C
Sbjct: 64 RLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCAR 123
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + G ++H+ I+ GF SDL+V N +I +Y G L +R +FDE RD+VS+
Sbjct: 124 LSSLEPGHEVHSH-IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182
Query: 125 LIVAYANNGDMESAGGLFNELP----LKDKVAWTAM--VTGYVQNAKPREAIEYFERMQY 178
+I YA ESA LF E+ L D+ + A+ V + + I
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
++++ + ++ A+ G+I A V S G + S+++ Y++CG I
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVF-----STMGTSKSAAAWSSMVCGYARCGEI 297
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ A ++F M +R+V S+++MI G++ G+ A++LF +M KP+ VT + VL+AC
Sbjct: 298 NVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSAC 357
Query: 299 SHVGLKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE-PNGG 345
+ +G G + +T A ++D+ + G ++ AL++ ++ G
Sbjct: 358 ARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGF 417
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFE--LEPDKI 378
V+ +++ H E A L L+PD++
Sbjct: 418 VFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 452
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 350/558 (62%), Gaps = 22/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+++ +++ W+ +I GY G D++ L+ M+ + P LS + AC
Sbjct: 177 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRA 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++S G+ IH I+ D ++ + ++ MY CG + + +F++M +++V+ T +
Sbjct: 237 GNLSYGKMIH-DFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAM 295
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y+ G +E+A +FN++ KD V W+AM++GY ++ P+EA+ F MQ G++ D
Sbjct: 296 VTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQ 355
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFG---PINNVVVGSALIDMYSKCGSIDDAY 242
VT++ VI+ACA LG + A W+ + +GFG PINN ALI+MY+KCGS++ A
Sbjct: 356 VTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINN-----ALIEMYAKCGSLERAR 410
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
RIF M ++NV S++ MI FAMHG A +A++ F M +PNG+TF+GVL ACSH G
Sbjct: 411 RIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAG 470
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + ++P HY CMVDL GRA L EAL++VE MP+ PN +WG+L
Sbjct: 471 LVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSL 530
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
+ AC++H E+ + AA L EL+PD G ++ LSNIYA A W+DV +VR+L+K G+
Sbjct: 531 MAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGIS 590
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G S E + IHEF D +H ++ EI + L +++ +L+ GY PN S+L D+ +
Sbjct: 591 KERGCSRFELNNE-IHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEE 649
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEKK +++ HSEKLAL +GL+ G+ +RI+KNLR+CEDCH F+ AS+V REIVVRD
Sbjct: 650 EEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRD 709
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHH++DG CSC +YW
Sbjct: 710 RTRFHHYKDGVCSCKDYW 727
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 165/396 (41%), Gaps = 85/396 (21%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + L +R + ++ +Y MR +G+ F+ L KA + V
Sbjct: 78 VFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKS 137
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +IH LG F SD +V ++ MY CG + +R
Sbjct: 138 LVEGLEIHGLAAKLG-FDSDPFVQTGLVRMYAACGRIAEARL------------------ 178
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+F+++ +D V W+ M+ GY Q+ +A+ FE M+ VE D +
Sbjct: 179 -------------MFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMM 225
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDDAYR 243
L V+SAC + G + Y + + F NN+VV SAL+ MY+ CGS+D A
Sbjct: 226 LSTVLSACGRAGNLSYGKMIHD------FIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-------------------- 283
+F M +N+ + ++M+ G++ G+ A +F MVK +
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339
Query: 284 -----------TKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDL 321
KP+ VT + V+TAC+H+G + G + ++++
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEM 399
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G LE A ++ +KMP N W ++ A +H
Sbjct: 400 YAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMH 434
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I + A + ++ A +FN +P + + ++ +P + + +ERM+ G+ D
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVD 121
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ ++ A +++ + + +A GF ++ V + L+ MY+ CG I +A +
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFD--SDPFVQTGLVRMYAACGRIAEARLM 179
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M R+V ++S MI G+ G + A+ LF +M +P+ + VL+AC G
Sbjct: 180 FDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNL 239
Query: 305 CYG-------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
YG V P + +V + G ++ AL + EKM
Sbjct: 240 SYGKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLFEKM 284
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 345/554 (62%), Gaps = 20/554 (3%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
VF N F ++A+I ++ + Y M G+ P +FT S++ K+C+
Sbjct: 100 FVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS--- 156
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+ +H Q I LG SDLYV ++ +Y + G + C+R++FD+MPER +VS T ++
Sbjct: 157 -LESGKVLHCQAIKLG-LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTML 214
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y+ G+++ A LF + +D V W M+ GY Q+ P E+++ F RM A + V
Sbjct: 215 TCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEV 274
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T++ V+SAC QLG ++ W+ E G NV VG+ALIDMYSKCGS++DA +F
Sbjct: 275 TVLAVLSACGQLGALESGRWIHSYIENKGIQI--NVHVGTALIDMYSKCGSLEDARLVFD 332
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
++ ++V +++SMI+G+AMHG + A+QLF +M +T KP +TFIG+L+AC H GL
Sbjct: 333 RIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEE 392
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P +HY CMV+LLGRAG LEEA +V+ M + + +WG LLG C
Sbjct: 393 GRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCC 452
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N ++ + A L + + G Y++LSN+YA+ G W+ V+++R L+K G++K G
Sbjct: 453 RLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHG 512
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E D V HEF AG+ HP S EI L ++ L+A GY P VL+D+ +E+K+
Sbjct: 513 CSSIEVDNKV-HEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKE 571
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L HSEKLA+AFGL++T PG TV+I+KNLR+C DCH M S++ GR+IV+RD RF
Sbjct: 572 QSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRF 631
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSCG+YW
Sbjct: 632 HHFEDGLCSCGDYW 645
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE +K ++ W +I GY G +S+ L+ M P T+ A+ AC ++
Sbjct: 227 RSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQL 286
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH+ I G +++VG +I MY KCG L +R VFD + ++DVV+W +
Sbjct: 287 GALESGRWIHSY-IENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSM 345
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV YA +G F++ A++ FE M G +
Sbjct: 346 IVGYAMHG--------FSQ-----------------------HALQLFEEMTETGHKPTD 374
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G++SAC G+++ + +G + ++++ + G +++AY +
Sbjct: 375 ITFIGILSACGHGGLVEEGRSFFRLMRDK-YGIEPKIEHYGCMVNLLGRAGHLEEAYGLV 433
Query: 246 VGM 248
M
Sbjct: 434 KNM 436
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 21/297 (7%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
QIHA ++L G + + + Y G L CS VF+ E +V S++ +I ++ +
Sbjct: 65 QIHA-SLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE-RMQYAGVETDYVTLVGV 191
+ A G ++++ L V A V + E+ + + G+ +D G+
Sbjct: 124 RLFDRAFGYYSQM-LSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGL 182
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ A+ G + A + + P ++V + ++ YSK G +D A +F GMK+R
Sbjct: 183 VDVYARGGDVVCARQLFDKM------PERSLVSLTTMLTCYSKMGELDKARSLFEGMKER 236
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------- 302
+V ++ MI G+A G + +++LF M+ + PN VT + VL+AC +G
Sbjct: 237 DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIH 296
Query: 303 --LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
++ G+ + ++D+ + G LE+A + +++ + + W +++ +H
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIR-DKDVVAWNSMIVGYAMH 352
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/558 (41%), Positives = 336/558 (60%), Gaps = 50/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +L+F+ + W +R + D+ISL+ +R I P +T S + KAC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ +LDV G+ +H LG S++++ N ++ +Y CG +G +RKVFD+MP+RDV++W
Sbjct: 124 SRLLDVRNGKIVHGYVEKLG-LQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITW 182
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I GD E A LF E+P ++ +WT+M+ GY Q K +EAI+ F M+ AG+
Sbjct: 183 NIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL 242
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT+V V+ ACA +G + + + + SG+ N+ V + LIDMY KCG ++DA
Sbjct: 243 PNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYE--KNIRVCNTLIDMYVKCGCLEDAC 300
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
RIF M++R V S+S+MI G A HGRA A+ LF M+ T KPN VTFIG+L ACSH+G
Sbjct: 301 RIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMG 360
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ + YG+ P +HY CMVDL RAG L+EA + + MP+ PNG VWGAL
Sbjct: 361 MVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGAL 420
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C++H+N ++A+ A HL +L+P G Y++LSNIYA AG W+DV+RVR+L++
Sbjct: 421 LGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMR----- 475
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
DRG + LL R++ GY PN VL D+ +
Sbjct: 476 ----------DRGTWEK--------------------LLQRMKLKGYVPNTSVVLLDMEE 505
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
++K++ L HSEKLA+ FGL+ T+PG +RIMKNLR+CEDCH + S V REIVVRD
Sbjct: 506 DQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRD 565
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F++G CSCG+YW
Sbjct: 566 RNRFHCFKNGSCSCGDYW 583
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 343/586 (58%), Gaps = 45/586 (7%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F VF + N F+W +I+G + L +I Y M + P FT LFKAC+
Sbjct: 85 FALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACS 143
Query: 64 EVLDVSLGQQIHAQTILLG-----------------------------GFTSDLYVGNTM 94
V G+QIH + G SD+ NTM
Sbjct: 144 VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTM 203
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
I Y+KCG L ++ +F +MP +++ SW +I A G++ A LF+E+ +D+++W+
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWS 263
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
+MV GY+ + +EA+E F++MQ L V++AC+ +G I WV + +
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRN 323
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+ V+G+AL+DMY+KCG +D + +F MK+R +F++++MI G A+HGRA A++
Sbjct: 324 SIKL--DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALE 381
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLL 322
LF + + KPNG+T +GVLTAC+H G + YGV P +HY CMVDLL
Sbjct: 382 LFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLL 441
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
GR+G EA ++ MP++PN VWGALLGAC+IH N ++A+ L ELEP G Y+
Sbjct: 442 GRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYV 501
Query: 383 ILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQ 442
+LSNIYA G +DDVS++R+L+K G+K PG S ++ + G +HEF+ GD +HP EI
Sbjct: 502 LLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLN-GTVHEFKMGDGSHPQMKEIY 560
Query: 443 QALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIM 502
+ L + +RLQ G+ P+ VL+D+ +EEK+ + HSEKLA+AFGL+ T PG + I+
Sbjct: 561 RKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIV 620
Query: 503 KNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
KNLR+C+DCH SQ+ REI+VRD +R+HHF++G CSC ++W
Sbjct: 621 KNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 217 GPINNVVVGSALIDMYSK--CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G + V AL+ Y+ + D A ++F + NVF ++ +I G + + AI
Sbjct: 60 GHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIY 119
Query: 275 LFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLG 323
+G MV + +PN T+ + ACS H + +G+ + + +
Sbjct: 120 FYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYA 178
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGA---CQIHRNPEIAQIAANHLFELEPDK-IG 379
G LE+A KM E + W ++ C + AA LF P K IG
Sbjct: 179 SFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCGVLE-------AAKGLFAQMPVKNIG 229
Query: 380 NYIILSNIYASAGMWDDVSRV 400
++ ++ N A G D ++
Sbjct: 230 SWNVMINGLAKGGNLGDARKL 250
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 343/586 (58%), Gaps = 45/586 (7%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F VF + N F+W +I+G + L +I Y M + P FT LFKAC+
Sbjct: 85 FALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACS 143
Query: 64 EVLDVSLGQQIHAQTILLG-----------------------------GFTSDLYVGNTM 94
V G+QIH + G SD+ NTM
Sbjct: 144 VAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTM 203
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
I Y+KCG L ++ +F +MP +++ SW +I A G++ A LF+E+ +D+++W+
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWS 263
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
+MV GY+ + +EA+E F++MQ L V++AC+ +G I WV + +
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRN 323
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+ V+G+AL+DMY+KCG +D + +F MK+R +F++++MI G A+HGRA A++
Sbjct: 324 SIKL--DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALE 381
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLL 322
LF + + KPNG+T +GVLTAC+H G + YGV P +HY CMVDLL
Sbjct: 382 LFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLL 441
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
GR+G EA ++ MP++PN VWGALLGAC+IH N ++A+ L ELEP G Y+
Sbjct: 442 GRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYV 501
Query: 383 ILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQ 442
+LSNIYA G +DDVS++R+L+K G+K PG S ++ + G +HEF+ GD +HP EI
Sbjct: 502 LLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLN-GTVHEFKMGDGSHPQMKEIY 560
Query: 443 QALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIM 502
+ L + +RLQ G+ P+ VL+D+ +EEK+ + HSEKLA+AFGL+ T PG + I+
Sbjct: 561 RKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIV 620
Query: 503 KNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
KNLR+C+DCH SQ+ REI+VRD +R+HHF++G CSC ++W
Sbjct: 621 KNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 217 GPINNVVVGSALIDMYSK--CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G + V AL+ Y+ + D A ++F + NVF ++ +I G + + AI
Sbjct: 60 GHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIY 119
Query: 275 LFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLG 323
+G MV + +PN T+ + ACS H + +G+ + + +
Sbjct: 120 FYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYA 178
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGA---CQIHRNPEIAQIAANHLFELEPDK-IG 379
G LE+A KM E + W ++ C + AA LF P K IG
Sbjct: 179 SFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCGVLE-------AAKGLFAQMPVKNIG 229
Query: 380 NYIILSNIYASAGMWDDVSRV 400
++ ++ N A G D ++
Sbjct: 230 SWNVMINGLAKGGNLGDARKL 250
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/553 (41%), Positives = 344/553 (62%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN WTA+I GYI G +++I ++ + + P SFT+ + ACT++ D
Sbjct: 169 VFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGD 228
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ IH + I+ G +++VG +++ MY KC
Sbjct: 229 LNSGEWIH-KCIMEMGMVRNVFVGTSLVDMYAKC-------------------------- 261
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G+ME A +F+ +P KD V+W AM+ GY N P+EAI+ F +MQ V+ D T
Sbjct: 262 -----GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYT 316
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VGV+SACA+LG ++ WV + + + F + N V+G+ALID+Y+KCGS+ A+ +F G
Sbjct: 317 VVGVLSACARLGALELGEWVSGLVDRNEF--LYNPVLGTALIDLYAKCGSMSRAWEVFKG 374
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+++ ++++I G AM+G + LFG + K KP+G TFIG+L C+H GL
Sbjct: 375 MKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEG 434
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + ++PS +HY CMVDLLGRAG L+EA +++ MP+E N VWGALLGAC+
Sbjct: 435 RRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACR 494
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHR+ ++A++A L ELEP GNY++LSNIY++ WD+ ++VR + ++K PG
Sbjct: 495 IHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGC 554
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D G++HEF GD HP S +I L +L +++ GY P VL+D+ +EEK+
Sbjct: 555 SWIEVD-GIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEH 613
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++ +P A +R++KNLR+C DCH+ + S + GREI VRDN RFH
Sbjct: 614 FLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFH 673
Query: 536 HFQDGKCSCGNYW 548
F++G CSC +YW
Sbjct: 674 CFREGSCSCNDYW 686
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 192/361 (53%), Gaps = 48/361 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F Q+K N FLW +IRG + D+I Y MR EG P +FT + KAC
Sbjct: 63 NYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKAC 122
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+LD+ LG +IH ++ GGF D++V +++ +Y KC
Sbjct: 123 ARLLDLQLGVKIHT-LVVKGGFDCDVFVKTSLVCLYAKC--------------------- 160
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
G +E A +F+++P K+ V+WTA+++GY+ K REAI+ F R+ +
Sbjct: 161 ----------GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA 210
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T+V V+SAC QLG + W+ + I E G + NV VG++L+DMY+KCG+++ A
Sbjct: 211 PDSFTIVRVLSACTQLGDLNSGEWIHKCIME---MGMVRNVFVGTSLVDMYAKCGNMEKA 267
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F GM ++++ S+ +MI G+A++G AI LF M + KP+ T +GVL+AC+ +
Sbjct: 268 RSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARL 327
Query: 302 GLKCYG--VSPSTDHY---------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G G VS D ++DL + G + A ++ + M E + VW A+
Sbjct: 328 GALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAI 386
Query: 351 L 351
+
Sbjct: 387 I 387
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I+GY L G K++I L+ M+RE + P +T+ + AC +
Sbjct: 268 RSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARL 327
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ + + + F + +G +I +Y KCG + + +VF M E+D V W +
Sbjct: 328 GALELGEWV-SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAI 386
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A NG ++ + GLF ++ + G++ D
Sbjct: 387 ISGLAMNGYVKISFGLFGQV-------------------------------EKLGIKPDG 415
Query: 186 VTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T +G++ C G++ +Y N + F ++ ++D+ + G +D+A
Sbjct: 416 NTFIGLLCGCTHAGLVDEGRRYFNSMYRF-----FSLTPSIEHYGCMVDLLGRAGLLDEA 470
Query: 242 YRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+++ M + N + +++ +H A +++ E +G
Sbjct: 471 HQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 343/555 (61%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ W ++ GY K S L+ M + G+ P S TL + AC+++
Sbjct: 162 RKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKL 221
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ I+ + I G +L + N +I M+ CG + ++ VFD M RDV+SWT +
Sbjct: 222 KDLEGGKHIY-KYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSI 280
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +AN G ++ A F+++P +D V+WTAM+ GY++ + EA+ F MQ + V+ D
Sbjct: 281 VTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDE 340
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V +++ACA LG ++ WV + + N+ VG+ALIDMY KCG++ A ++F
Sbjct: 341 FTMVSILTACAHLGALELGEWVKTYIDKNSIK--NDTFVGNALIDMYFKCGNVGKAKKVF 398
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++ F++++MI+G A++G A+ +F +M++ P+ +T+IGVL AC+H G+
Sbjct: 399 KEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVE 458
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ P+ HY CMVDLLGRAG LEEA +++ MPV+PN VWG+LLGA
Sbjct: 459 KGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA 518
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N ++A++AA + ELEP+ Y++L NIYA+ W+++ +VR+L+ G+KK P
Sbjct: 519 CRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTP 578
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G ++EF AGD +HP S EI L +++ L GY P+ V D+ +E+K
Sbjct: 579 GCSLMELN-GNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDK 637
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+A+ L+++ PG T+RI+KNLR+C DCH S+ RE++VRD R
Sbjct: 638 ETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTR 697
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC N+W
Sbjct: 698 FHHFRHGSCSCNNFW 712
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 188/420 (44%), Gaps = 81/420 (19%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF+ + F+W +I+GY H ++ +S+Y M I P FT L K T
Sbjct: 59 YARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFT 118
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ + + GF S+L+V I M+ C + +RKVFD +VV+W
Sbjct: 119 RNMALQYGKVLLNHAV-KHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTW- 176
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
M++GY + + +++ F M+ GV
Sbjct: 177 ------------------------------NIMLSGYNRVKQFKKSKMLFIEMEKRGVSP 206
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAY 242
+ VTLV ++SAC++L ++ + + G G + N+++ + LIDM++ CG +D+A
Sbjct: 207 NSVTLVLMLSACSKLKDLEGGKHIYKYING---GIVERNLILENVLIDMFAACGEMDEAQ 263
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHG-------------------------------RAHA 271
+F MK R+V S++S++ GFA G R
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCY--GVSPSTDHYA--CMVD 320
A+ LF +M + KP+ T + +LTAC+H+G +K Y S D + ++D
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALID 383
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKI 378
+ + G + +A K+ ++M + W A++ I+ + E A +++ E + PD+I
Sbjct: 384 MYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+G M A +F+ +P W M+ GY + P+ + + M + ++ D T +
Sbjct: 54 SGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFL 113
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ + ++Y + A GF +N+ V A I M+S C +D A ++F
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFD--SNLFVQKAFIHMFSLCRLVDLARKVFDMGDAW 171
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
V +++ M+ G+ + + LF +M K PN VT + +L+ACS +
Sbjct: 172 EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKL 221
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/559 (40%), Positives = 334/559 (59%), Gaps = 19/559 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKAC 62
+ R +F +++ + F+ LIR Y + D++ Y M + P T L KAC
Sbjct: 87 YARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKAC 146
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+E+ + LG+ IH+ LG ++S++ V N ++ MY CG + + VFD PE D SW
Sbjct: 147 SEIPSLRLGEAIHSHVFKLG-WSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW 205
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I Y G +SA +F +P +D V+W+ M+ GYVQ ++ +E + F+ M +E
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE 265
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ LV +SACA LG ++ W+ E V +G+ALIDMYSKCGS++ A
Sbjct: 266 PNESVLVNALSACAHLGAMEQGQWIERYMERKNVRL--TVRLGTALIDMYSKCGSVERAL 323
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F MK++NV ++S+MI G A++G+ A+ LF M KPN VTFIG+L ACSH
Sbjct: 324 EVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSK 383
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG+ P+ H+ CMVDL GRAG L++A +++ MP +PN +WGAL
Sbjct: 384 LVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGAL 443
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+IH + E+ + L EL+P+ G Y++LSNIYA+ G WD V+ +RR+++ +
Sbjct: 444 LNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVS 503
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG S+++ GD IHEF AGD +HP I LG++ L+A GY+P+ VL D+
Sbjct: 504 KTPGCSFIDLGD--TIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMD 561
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEKLA+AFGL+ T PG T+RI KNLR+C DCH S++ REI+VR
Sbjct: 562 EEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVR 621
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC ++W
Sbjct: 622 DRCRFHHFRDGSCSCMDFW 640
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 340/564 (60%), Gaps = 28/564 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF++ + W +I GY +S+ L+ M R + P S TL ++ AC
Sbjct: 171 SVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSAC 230
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVG------NTMIGMYVKCGFLGCSRKVFDEMPE 116
+++ D+++G+++H + DL + N +I MY CG + + +FD M
Sbjct: 231 SKLKDLNVGKRVHR-------YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKS 283
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
RDV+SWT ++ + N G + A F+++P +D V+WTAM+ GY+Q + +E + F M
Sbjct: 284 RDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREM 343
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
Q A ++ D T+V +++ACA LG ++ W+ + + + VG+ALIDMY CG
Sbjct: 344 QAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKI--DSFVGNALIDMYFNCG 401
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+++ A RIF M R+ S++++I G A++G A+ +F M+K P+ VT IGVL
Sbjct: 402 NVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLC 461
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC+H G+ +G+ P+ HY CMVDLLGRAG L+EA ++++ MPV+PN
Sbjct: 462 ACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNS 521
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
VWG+LLGAC++HR+ E+A++AA + ELEP+ Y++L NIYA+ W+ + VR+L+
Sbjct: 522 IVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLM 581
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
G+KK PG S +E + G +HEF AGD HP S EI L ++ L+ GY P+ V
Sbjct: 582 MDRGIKKTPGCSLIEMN-GSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEV 640
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
D+ +EEK+ + HSEKLA+AFGL+++ PG T+RI+KNLR+C DCH S+V R
Sbjct: 641 FLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNR 700
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
E++VRD RFHHF+ G CSC +YW
Sbjct: 701 EVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 169/378 (44%), Gaps = 76/378 (20%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R+VF+ + N F+W +I+GY G ++S+YC M G+ P +T L K T
Sbjct: 71 YARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFT 130
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G+++H + LG F+S+++V N +I +Y G + +R VF
Sbjct: 131 RDTAVKCGRELHDHIVKLG-FSSNVFVQNALIHLYSLSGEVSVARGVF------------ 177
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
D S G D V W M++GY ++ + E+++ F+ M+ V
Sbjct: 178 ----------DRSSKG---------DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLP 218
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+TLV V+SAC++L + V + P+ V+ +ALIDMY+ CG +D A
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVR--VLENALIDMYAACGDMDTALG 276
Query: 244 IFVGMKQRNVFSYSSMILGFAMHG-------------------------------RAHAA 272
IF MK R+V S+++++ GF G R
Sbjct: 277 IFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEV 336
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCY--GVSPSTDHYA--CMVDL 321
+ LF +M KP+ T + +LTAC+H+G +K Y D + ++D+
Sbjct: 337 LSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDM 396
Query: 322 LGRAGCLEEALKMVEKMP 339
G +E+A+++ MP
Sbjct: 397 YFNCGNVEKAIRIFNAMP 414
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 13/217 (5%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GDME A +F+ +P + W M+ GY + P A+ + M GV D T ++
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ +K + + GF +NV V +ALI +YS G + A +F + +
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFS--SNVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HV 301
V +++ MI G+ + +++LF +M + P+ +T + VL+ACS H
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 302 GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+K + P ++D+ G ++ AL + + M
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNM 281
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 342/555 (61%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ KN ++ ++ Y+ D + + M ++G P T+ + AC ++
Sbjct: 286 RQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQL 345
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+S+G+ HA +L G + N +I MY+KCG + KVF+ MP + VV+W L
Sbjct: 346 GDLSVGKSSHAY-VLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSL 404
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +GDME A +F+E+ +D V+W M+ VQ + EAIE F MQ G+ D
Sbjct: 405 IAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDR 464
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+VG+ SAC LG + A WVC E + ++ +G+AL+DM+S+CG A +F
Sbjct: 465 VTMVGIASACGYLGALDLAKWVCTYIEKNDIHV--DLQLGTALVDMFSRCGDPSSAMHVF 522
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M++R+V ++++ I AM G AI+LF +M++ + KP+ V F+ +LTACSH G
Sbjct: 523 KRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVD 582
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P HY CMVDLLGRAG LEEA+ +++ MP+EPN VWG+LL A
Sbjct: 583 QGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H+N E+A AA L +L P+++G +++LSNIYASAG W DV+RVR +K G++K P
Sbjct: 643 CRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVP 702
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E +G+IHEF +GD +H +T I L ++ RL GY P+ +VL DV ++EK
Sbjct: 703 GSSSIEV-QGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEK 761
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+A+GL+TT G +R++KNLR+C DCH F S++ REI VRDN R
Sbjct: 762 EHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNR 821
Query: 534 FHHFQDGKCSCGNYW 548
+H F++G CSC +YW
Sbjct: 822 YHFFKEGFCSCRDYW 836
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 162/333 (48%), Gaps = 45/333 (13%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F++ LIRGY G +I LY M GI P +T L AC+++L +S G Q+H
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHG- 154
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+L G D++V N++I Y +CG + RK+FD M ER+VV
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVV----------------- 197
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
+WT+++ GY +EA+ F +M AGVE + VT+V VISACA+
Sbjct: 198 --------------SWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAK 243
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
L ++ VC S G + ++ +AL+DMY KCG I A +IF +N+ Y+
Sbjct: 244 LKDLELGKKVCSYI--SELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYN 301
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST----- 312
+++ + H A + + +M++ +P+ VT + + AC+ +G G S
Sbjct: 302 TIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN 361
Query: 313 -----DHYA-CMVDLLGRAGCLEEALKMVEKMP 339
D+ + ++D+ + G E A K+ E MP
Sbjct: 362 GLEGWDNISNAIIDMYMKCGKREAACKVFEHMP 394
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 179/417 (42%), Gaps = 79/417 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N WT+LI GY + K+++SL+ M G+ P T+ + AC ++
Sbjct: 185 RKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKL 244
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ LG+++ + LG S + V N ++ MY+KCG + +R++FDE +++
Sbjct: 245 KDLELGKKVCSYISELGMELSTIMV-NALVDMYMKCGDICAARQIFDECANKNL------ 297
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
V + +++ YV + + + + M G D
Sbjct: 298 -------------------------VMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDK 332
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS-------- 237
VT++ I+ACAQLG + +G +N + +A+IDMY KCG
Sbjct: 333 VTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDN--ISNAIIDMYMKCGKREAACKVF 390
Query: 238 -----------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
++ A+RIF M +R++ S+++MI AI+
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIE 450
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL------KCYGVSPSTDHY-----ACMVDLLG 323
LF +M + VT +G+ +AC ++G C + + H +VD+
Sbjct: 451 LFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFS 510
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKI 378
R G A+ + ++M + + W A +G + N E A N + E ++PD +
Sbjct: 511 RCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDV 566
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/593 (40%), Positives = 352/593 (59%), Gaps = 52/593 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F+++ KN + +IR Y+ G +D++ ++ +M +G P ++T + KAC+
Sbjct: 89 YTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACS 148
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +G QIH + LG +LY+GN ++ MY KC +L +R+V DEMP RD+VSW
Sbjct: 149 VSGNLWVGLQIHGAVVKLG-LDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWN 207
Query: 124 ELIVAYANNG----------DMES------AGGLFNELP-------------------LK 148
++ YA NG +ME AG + + LP LK
Sbjct: 208 SMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLK 267
Query: 149 DK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+K ++W M+ YV NA P EA++ + +MQ GVE D V++ V+ AC L
Sbjct: 268 EKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRR 327
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+ E E P N+++ +ALIDMY+KCG + +A +F M R+V S++SMI + M
Sbjct: 328 IHEYVERKKLRP--NLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMS 385
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC------YGVSPSTDHY 315
G+ A+ LF M + P+ + F+ VL ACSH GL C YG++P +HY
Sbjct: 386 GQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHY 445
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP 375
CMVDLLGRAG ++EA + +MP+EPN VWG+LL AC+++ + IA +AA+HLF+L P
Sbjct: 446 NCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAP 505
Query: 376 DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTH 435
++ G Y++LSNIYA AG W DV VR ++ G+KK PG S +E + V + F AGD +H
Sbjct: 506 EQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHV-YTFLAGDQSH 564
Query: 436 PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSP 495
S EI +ALG L+ R++ GY P S L+DV +E+K+ L HSEKLA+ F +L T P
Sbjct: 565 TQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKP 624
Query: 496 GATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G+T+RI KN+R+C DCH+ S++ REI++RD RFHHF+DG CSCG+YW
Sbjct: 625 GSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 77/363 (21%)
Query: 50 PVSFT-----LSALFKA-----CTEVLDVSLG----QQIHAQTILLGGFTSDLYVGNTMI 95
P S T LS F A C ++LDV+ +++H++ ++ + +G ++
Sbjct: 19 PFSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLM 78
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
Y CG +R +FDE+ +++VV + +I +Y NN GL+
Sbjct: 79 RAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNN-------GLY------------- 118
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS- 214
++A+ F+ M G D T V+ AC+ G + WV G+
Sbjct: 119 -----------QDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNL----WVGLQIHGAV 163
Query: 215 -GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
G N+ +G+ L+ MY KC +D A R+ M R++ S++SM+ G+A +GR + A+
Sbjct: 164 VKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDAL 223
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA-----------CMVDLL 322
+L +M + KP+ T +L A ++ C V D + M+ +
Sbjct: 224 KLCREMEDLKLKPDAGTMGSLLPAVTNTS--CDNVLYVKDMFVKLKEKSLISWNVMIAVY 281
Query: 323 GRAGCLEEALKMVEKMP---VEPNGGVWGALLGAC----------QIHRNPEIAQIAANH 369
EA+ + +M VEP+ ++L AC +IH E ++ N
Sbjct: 282 VNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNL 341
Query: 370 LFE 372
L E
Sbjct: 342 LLE 344
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/555 (38%), Positives = 339/555 (61%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + W +I Y G ++S L+ M + + P + TL + AC+++
Sbjct: 173 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 232
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+++H+ + S+L + N MI MY CG + + +F M RD++SWT +
Sbjct: 233 KDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 291
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + N G+++ A F+++P KD V+WTAM+ GY+++ + +EA+E F MQ V+ D
Sbjct: 292 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 351
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V V++ACA LG ++ W+ + + N++ V +ALIDMY KCG +D A IF
Sbjct: 352 FTMVSVLTACAHLGALELGEWIRTYIDRNKIK--NDLFVRNALIDMYFKCGDVDKAESIF 409
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M QR+ F++++MI+G A++G A+ +F +M+K P+ +T+IGVL+AC+H GL
Sbjct: 410 REMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVD 469
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ P+ HY C+VDLL RAG L+EA +++E MP++ N VWGALL
Sbjct: 470 KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+++R ++A++ + ELEPD Y++L NIYA+ W+D+ +R+++ G+KK P
Sbjct: 530 CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTP 589
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G +HEF AGD +HP + I L + L+ GY P++ V D+++E+K
Sbjct: 590 GCSLIEMN-GRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDK 648
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+AFGL+ + PG T+RI KNLR+C DCH S+V RE++VRD R
Sbjct: 649 ENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTR 708
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 709 FHHFKHGLCSCKDYW 723
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 65/331 (19%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R +F+++ N F+W +IRGY + +SLY M R G+ P +T LFK
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T + + G+Q+H +L G +++V ++ MY+ CG L +R VFD P+ DV++W
Sbjct: 129 TRDIALEYGRQLHGH-VLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 187
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I AY G E + LF L ++DK V
Sbjct: 188 NMIISAYNKVGKFEESRRLF--LVMEDK-----------------------------QVL 216
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VTLV V+SAC++L ++ V + +N+V+ +A+IDMY+ CG +D A
Sbjct: 217 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE--SNLVLENAMIDMYADCGEMDSAL 274
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHG-------------------------------RAHA 271
IF M R++ S+++++ GF G R
Sbjct: 275 GIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKE 334
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
A++LF +M T KP+ T + VLTAC+H+G
Sbjct: 335 ALELFRNMQATNVKPDEFTMVSVLTACAHLG 365
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 13/217 (5%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GD + A LF+E+P + W M+ GY + P+ + + M GV+ D T +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ ++Y + G NV V +AL+ MY CG +D A +F + +
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQ--YNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 183
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HV 301
V +++ +I + G+ + +LF M + P VT + VL+ACS H
Sbjct: 184 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243
Query: 302 GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+K V + M+D+ G ++ AL + M
Sbjct: 244 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/555 (42%), Positives = 338/555 (60%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ KN L+ ++ Y+ QG ++ +++ M + G P T+ + AC+E+
Sbjct: 295 RKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSEL 354
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DVS G+ H +L G V N +I MY+KCG + +VFD M + VSW L
Sbjct: 355 DDVSCGKWCHGY-VLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSL 413
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I + NGDMESA +F+ +P D V+W M+ VQ + +EAIE F MQ G+ D
Sbjct: 414 IAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADK 473
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+VGV SAC LG + A W+ + ++ +G+AL+DM+++CG A ++F
Sbjct: 474 VTMVGVASACGYLGALDLAKWIHGYIKKKDIH--FDMHLGTALVDMFARCGDPQSAMQVF 531
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +R+V ++++ I AM G AI+LF +M++ KP+GV F+ +LTA SH GL
Sbjct: 532 NKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVE 591
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG++P HY CMVDLLGRAG L EAL ++ M +EPN +WG+LL A
Sbjct: 592 QGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAA 651
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N +IA AA + EL+P++ G +++LSNIYASAG WDDV++VR LK G K P
Sbjct: 652 CRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMP 711
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G I EF GD +HP T I+ L ++ RL+ GY P+L +VL DV+++EK
Sbjct: 712 GSSSIEIN-GKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEK 770
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AF L++T G +R+ KNLRIC DCH F S+ REI+VRDN R
Sbjct: 771 EYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNR 830
Query: 534 FHHFQDGKCSCGNYW 548
FH FQ G CSCG+YW
Sbjct: 831 FHFFQQGFCSCGDYW 845
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 154/298 (51%), Gaps = 45/298 (15%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+++++LIRG+ G +I ++ + G P +FT + ACT+ ++ G Q+H
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ +G F D++V N++I Y +CG + C R+VFD+M ER+V
Sbjct: 165 IVKMG-FERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNV------------------ 205
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
V+WT+++ GY + +EA+ F M G+ + VT+VGVISACA+
Sbjct: 206 -------------VSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAK 252
Query: 198 LGVIKYANWVCEIAEGSGFGPIN---NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
L ++ VC + G + N ++ +AL+DMY KCG+ID A +IF +N+
Sbjct: 253 LQDLQLGEQVC-----TCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLV 307
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYG 307
Y++++ + G A + + G+M+K +P+ +T + ++ACS + G C+G
Sbjct: 308 LYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHG 365
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 176/396 (44%), Gaps = 77/396 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N WT+LI GY +G K+++SL+ M GI P S T+ + AC ++
Sbjct: 194 RRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKL 253
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ LG+Q+ L + L V N ++ MY+KCG + +RK+FDE ++++V
Sbjct: 254 QDLQLGEQVCTCIGELELEVNALMV-NALVDMYMKCGAIDKARKIFDECVDKNLV----- 307
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
L+N +++ YV+ RE + M G D
Sbjct: 308 ---------------LYN-----------TIMSNYVRQGLAREVLAVLGEMLKHGPRPDR 341
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T++ +SAC++L + W +G +NV +A+I+MY KCG + A R+F
Sbjct: 342 ITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC--NAIINMYMKCGKQEMACRVF 399
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHA-------------------------------AIQ 274
M + S++S+I GF +G + AI+
Sbjct: 400 DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIE 459
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLK-----CYGVSPSTD-HY-----ACMVDLLG 323
LF M + VT +GV +AC ++G +G D H+ +VD+
Sbjct: 460 LFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFA 519
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
R G + A+++ KM V+ + W A +GA + N
Sbjct: 520 RCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/544 (42%), Positives = 340/544 (62%), Gaps = 16/544 (2%)
Query: 17 PFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHA 76
P +W ALI G+ G + S + M R + T ++ AC + D+ LG Q+H
Sbjct: 126 PVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVH- 184
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
+ +L G D V N ++ MY +CG + + +F+ M R + SWT +I +G ++
Sbjct: 185 KRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVD 244
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A LF+ +P +D +AWTAM+ GYVQ + R+A+E F MQ V D T+V V++ACA
Sbjct: 245 RARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACA 304
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
QLG ++ W I G G +V VG+ALIDMYSKCGSI+ A +F M R+ F++
Sbjct: 305 QLGALETGEWA-RIYMGR-LGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTW 362
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
+++ILG A++GR AI +F M++ P+ VTF+GVLTAC+H GL +
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
Y +SP+ HY C++D+LGRAG L+EAL ++KMP++PN +WG LL +C+++ N EI +
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGE 482
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
+AA L EL+PD YI+LSN+YA + W DV R+R+++ G+KK PG S +E + G+
Sbjct: 483 LAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMN-GI 541
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
IHEF A D +HP + EI L ++L L+ GY P++ VL +V++EEK+++L HSEKL
Sbjct: 542 IHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKL 601
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+ F LLT+ +RI+KNLR+C DCH + S++ GRE++VRD RFHHF+ G CSC
Sbjct: 602 AVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSC 661
Query: 545 GNYW 548
+YW
Sbjct: 662 KDYW 665
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 39/239 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ WTA+I GY+ G +D++ + M+ + FT+ ++ AC ++
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 66 LDVSLGQQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ G+ I +G G D++VGN +I MY KCG + + VF +M RD +WT
Sbjct: 307 GALETGEWAR---IYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWT 363
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+ A NG E EAI+ F RM A
Sbjct: 364 AIILGLAVNGRGE-------------------------------EAIDMFYRMLRALQTP 392
Query: 184 DYVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT VGV++AC G++ K + + E P VV LID+ + G + +A
Sbjct: 393 DEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISP--TVVHYGCLIDVLGRAGKLKEA 449
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/585 (40%), Positives = 338/585 (57%), Gaps = 49/585 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V+ N FLW +I+ I +I LY M P +T A+ KAC++
Sbjct: 93 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 152
Query: 68 VSLGQQIHAQTILLG-------------------------------GFTSDLYVGNTMIG 96
V+ G Q+HA + G G D N MI
Sbjct: 153 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 212
Query: 97 MYVKCGFLGCSRKVFDEMPERDVVS-WTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
Y++ G + +R++F+ MP+R ++S W +I ++ G +E A F+E+ +D+++W+A
Sbjct: 213 GYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 272
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ GY+Q EA+E F +MQ + L V+SACA LG + W+ A+ +
Sbjct: 273 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 332
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
+ V+G++L+DMY+KCG ID A+ +F M + V S+++MI G AMHGRA AI L
Sbjct: 333 IQL--DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDL 390
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLG 323
F M + PN +TF+GVL AC+H GL K YGV P +HY C+VDLLG
Sbjct: 391 FSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 447
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
RAG L EA K+V +P EP VWGALLGAC+ H N E+ + L ELEP G Y +
Sbjct: 448 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 507
Query: 384 LSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQ 443
LSNIYA AG W++V VR+L+K G+K PG S ++ RG +H+F GD +HP +I Q
Sbjct: 508 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 567
Query: 444 ALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMK 503
L + +RLQ +GY+P+ VL+D+ +EEK+ + HSEKLA+ FGL+ TSPG T+RI+K
Sbjct: 568 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 627
Query: 504 NLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
NLR+CEDCH SQV REI+VRD +R+HHF++G CSC ++W
Sbjct: 628 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 43/206 (20%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M R F+++K ++ W+A+I GYI +G +++ ++ M++E I P F L ++
Sbjct: 251 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 310
Query: 61 ACTEVLDVSLGQQIHA----QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
AC + + G+ IH +I L G +G +++ MY KCG + + +VF++M
Sbjct: 311 ACANLGALDQGRWIHTYAKRNSIQLDGV-----LGTSLVDMYAKCGRIDLAWEVFEKMSN 365
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
++V SW +I A +G E A LF+++ + P E
Sbjct: 366 KEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI-----------------NPNE-------- 400
Query: 177 QYAGVETDYVTLVGVISACAQLGVIK 202
+T VGV++ACA G+++
Sbjct: 401 ---------ITFVGVLNACAHGGLVQ 417
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 137/349 (39%), Gaps = 85/349 (24%)
Query: 125 LIVAYANNG-----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
L+ +YAN ES+ +F+ + + W M+ ++N +P +AI + M A
Sbjct: 72 LVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVA 131
Query: 180 GVETDYVTLVGVISACAQLGVIK-----YANWVCEIAEGSG------------FGPI--- 219
+ T V+ AC+ GV+ +A+ V G G FG +
Sbjct: 132 HFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEA 191
Query: 220 ----------NNVVVGSALIDMYSKCGSIDDAYRIFVG---------------------- 247
+ V +A+ID Y + G ++ A +F G
Sbjct: 192 RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGM 251
Query: 248 ----------MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
MK+R+ S+S+MI G+ G A+++F M K + +P VL+A
Sbjct: 252 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSA 311
Query: 298 CSHVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C+++G G T YA +VD+ + G ++ A ++ EKM
Sbjct: 312 CANLGALDQGRWIHT--YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEV 368
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
W A++G +H E A I ++ P++I ++ + N A G+
Sbjct: 369 SSWNAMIGGLAMHGRAEDA-IDLFSKMDINPNEI-TFVGVLNACAHGGL 415
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 217 GPINNVVVGSALIDMYSKCG-----SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
G + + + +L+ Y+ S + + R+F +++ NVF ++ MI +
Sbjct: 61 GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFK 120
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVD 320
AI L+ +M+ +PN T+ VL ACS H L +G+ + +
Sbjct: 121 AILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIR 180
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+ G L EA ++++ E + W A++ R E+ AA LFE PD+
Sbjct: 181 MYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL--RFGEVE--AARELFEGMPDR 233
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/555 (38%), Positives = 339/555 (61%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + W +I Y G ++S L+ M + + P + TL + AC+++
Sbjct: 194 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 253
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+++H+ + S+L + N MI MY CG + + +F M RD++SWT +
Sbjct: 254 KDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 312
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + N G+++ A F+++P KD V+WTAM+ GY+++ + +EA+E F MQ V+ D
Sbjct: 313 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 372
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V V++ACA LG ++ W+ + + N++ V +ALIDMY KCG +D A IF
Sbjct: 373 FTMVSVLTACAHLGALELGEWIRTYIDRNKIK--NDLFVRNALIDMYFKCGDVDKAESIF 430
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M QR+ F++++MI+G A++G A+ +F +M+K P+ +T+IGVL+AC+H GL
Sbjct: 431 REMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVD 490
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ P+ HY C+VDLL RAG L+EA +++E MP++ N VWGALL
Sbjct: 491 KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+++R ++A++ + ELEPD Y++L NIYA+ W+D+ +R+++ G+KK P
Sbjct: 551 CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXP 610
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G +HEF AGD +HP + I L + L+ GY P++ V D+++E+K
Sbjct: 611 GCSLIEMN-GRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDK 669
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+AFGL+ + PG T+RI KNLR+C DCH S+V RE++VRD R
Sbjct: 670 ENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTR 729
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 730 FHHFKHGLCSCKDYW 744
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 65/331 (19%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R +F+++ N F+W +IRGY + +SLY M R G+ P +T LFK
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T + + G+Q+H +L G +++V ++ MY+ CG L +R VFD P+ DV++W
Sbjct: 150 TRDIALEYGRQLHGH-VLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 208
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I AY G E + LF L ++DK V
Sbjct: 209 NMIISAYNKVGKFEESRRLF--LVMEDK-----------------------------QVL 237
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VTLV V+SAC++L ++ V + +N+V+ +A+IDMY+ CG +D A
Sbjct: 238 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE--SNLVLENAMIDMYADCGEMDSAL 295
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHG-------------------------------RAHA 271
IF M R++ S+++++ GF G R
Sbjct: 296 GIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKE 355
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
A++LF +M T KP+ T + VLTAC+H+G
Sbjct: 356 ALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 13/217 (5%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GD + A LF+E+P + W M+ GY + P+ + + M GV+ D T +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ ++Y + G NV V +AL+ MY CG +D A +F + +
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQ--YNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 204
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HV 301
V +++ +I + G+ + +LF M + P VT + VL+ACS H
Sbjct: 205 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264
Query: 302 GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+K V + M+D+ G ++ AL + M
Sbjct: 265 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/561 (41%), Positives = 346/561 (61%), Gaps = 23/561 (4%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDS---ISLYCSMRREGIGPVSFTLSALFKACT 63
+VF+++ + L+ ++IR Y G + Y M G+ +FTL + K+C
Sbjct: 133 VVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCA 192
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ V +G+ +H Q + +G D YVG ++I MYVKCG +G +RK+FD+M RD+ SW
Sbjct: 193 DLSRVCMGRCVHGQGLRVG-LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWN 251
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE- 182
LI Y G++ A LF + ++ V+WTAM++GY QN +A+ F+ M G E
Sbjct: 252 ALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEM 311
Query: 183 -TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
++VT+V V+ ACAQ ++ + + A G G N V +AL MY+KC S+ +A
Sbjct: 312 KPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL--NSSVQTALAGMYAKCYSLVEA 369
Query: 242 YRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
F + +N+ ++++MI +A HG A+ +F +M++ +P+ VTF+G+L+ CS
Sbjct: 370 RCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCS 429
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + V P +HYAC+VDLLGRAG L EA +++ +MP++ VW
Sbjct: 430 HSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVW 489
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+ HRN EIA++AA LF LEPD GNY++LSN+YA AGMW++V ++R LLK
Sbjct: 490 GALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQ 549
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G+KK+PG SW+E + G H F D +HP + EI + L L ++++ GY P+ VL+D
Sbjct: 550 GMKKSPGCSWIEIN-GKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHD 608
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+S+EEK+ L THSEKLA+AFGLL T PG +R+ KNLRIC DCH S++ REI+
Sbjct: 609 ISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREII 668
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFH F+DG CSCG+YW
Sbjct: 669 VRDLNRFHCFKDGSCSCGDYW 689
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 70/287 (24%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + + +F+ T + LGQQ HAQ I+L G + ++ M+ MY
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQ-IVLHGLQPNAFLAAKMVAMY----------- 122
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA---KP 166
A++GD++SA +F+ + + + +++ Y ++
Sbjct: 123 --------------------ASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXX 162
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
+E + RM + G+ D TL V+ +CA L + C +G G + VG+
Sbjct: 163 XXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGR--CVHGQGLRVGLEGDFYVGA 220
Query: 227 ALIDMYSKCGSIDDAYRIF-----------------------VG--------MKQRNVFS 255
+LIDMY KCG I DA ++F +G M+ RN+ S
Sbjct: 221 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 280
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVK--TETKPNGVTFIGVLTACSH 300
+++MI G+ +G A A+ LF +M++ +E KPN VT + VL AC+
Sbjct: 281 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 47/262 (17%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG---------RAHA 271
N + + ++ MY+ G +D A +F + + Y+S+I + HG A+A
Sbjct: 111 NAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYA 170
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG---------VSPSTDHY--ACMVD 320
+ G + T P VL +C+ + C G V D Y A ++D
Sbjct: 171 RMHFLGLLGDNFTLPF------VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLID 224
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-LEPDKIG 379
+ + G + +A K+ +KM V + W AL+ + EI A LFE +E I
Sbjct: 225 MYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYM--KEGEIG--VAEDLFERMEHRNIV 279
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY-------------SWLEGDRGVIH 426
++ + + Y G + + + G + P + + LE R IH
Sbjct: 280 SWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR-IH 338
Query: 427 EFRAGDLTHPNSTEIQQALGDL 448
+F G H NS+ +Q AL +
Sbjct: 339 DFANGIGLHLNSS-VQTALAGM 359
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/554 (40%), Positives = 338/554 (61%), Gaps = 17/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ N F++ LIR + + Y M + I P + T L KA TE+
Sbjct: 75 IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V +G+Q H+Q + G F +D+YV N+++ MY CG + + ++F +MP RDVVSWT ++
Sbjct: 135 VVVGEQTHSQIVRFG-FQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVA 193
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y G +E A +F+E+P ++ W+ M+ GY +N +AI+ FE M+ GV +
Sbjct: 194 GYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETV 253
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V VIS+CA LG +++ E S N+++G+AL+DMY +CG I+ A R+F
Sbjct: 254 MVSVISSCAHLGALEFGERAHEYVVKSHMTV--NLILGTALVDMYWRCGEIEKAIRVFEE 311
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++ S+SS+I G A+HG AH AI F MV+ P +T VL+ACSH GL
Sbjct: 312 LPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKG 371
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY C+VD+LGRAG L EA + KMPV+PN + GALLGAC+
Sbjct: 372 LEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACK 431
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
I++N E+A+ N L E++P+ G Y++LSNIYA AG W+ + +R ++K +KK PG+
Sbjct: 432 IYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGW 491
Query: 416 SWLEGDRGVIHEFRAGD-LTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E D G I++F GD HP +I++ ++L +++ GY+ N +DV +EEK+
Sbjct: 492 SLIEID-GKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKE 550
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ HSEKLA+A+G++ T G T+RI+KNLR+CEDCH S+V GRE +VRD RF
Sbjct: 551 TAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRF 610
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC +YW
Sbjct: 611 HHFRNGLCSCRDYW 624
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 41/260 (15%)
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A G+F+++ + + ++ + A+P +A ++ +M + + D +T +I A +
Sbjct: 72 AYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTE 131
Query: 198 LGVI---------------------------KYANWVCEIAEGSGFG--PINNVVVGSAL 228
+ + YAN A G FG P +VV +++
Sbjct: 132 MECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSM 191
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ Y KCG ++DA +F M RN+F++S MI G+A + AI LF M + N
Sbjct: 192 VAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANE 251
Query: 289 VTFIGVLTACSHVGLKCYGVSPS----TDHY-------ACMVDLLGRAGCLEEALKMVEK 337
+ V+++C+H+G +G H +VD+ R G +E+A+++ E+
Sbjct: 252 TVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEE 311
Query: 338 MPVEPNGGVWGALLGACQIH 357
+P + + W +++ +H
Sbjct: 312 LP-DKDSLSWSSIIKGLAVH 330
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/553 (40%), Positives = 336/553 (60%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF Q++ N F++ + IRG+ S Y +R G+ P + T L KACT+
Sbjct: 69 VFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGS 128
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G Q H Q I+ GF SD+YV N+++ MY G + + VF + DVVSWT ++
Sbjct: 129 LDMGIQAHGQ-IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVA 187
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y +GD+ SA LF+++P K+ V W+ M++GY +N+ +AIE + +Q GV +
Sbjct: 188 GYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETV 247
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V VI++CA LG ++ + + N+++G+AL+DMY++CGSID A +F
Sbjct: 248 MVSVIASCAHLGALELGERAHDYILRNKMTV--NLILGTALVDMYARCGSIDKAIWVFDQ 305
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ R+ S++++I GFAMHG A A++ F M K P +TF VL+ACSH GL
Sbjct: 306 LPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERG 365
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y + P +HY CMVDLLGRAG L EA K V +MP++PN +WGALLGAC+
Sbjct: 366 LELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACR 425
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N EIA+ A L EL+P+ G Y++LSNIYA W++V +R+++K G+ K PGY
Sbjct: 426 IHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGY 485
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
+ E D G +H+F GD THP +I++ ++L +++ GY N L+D+ +EEK+
Sbjct: 486 TLFEMD-GKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKES 544
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+ HSEKLA+A+ ++ T +RI+KNLR+CEDCH S+V RE++VRD RFH
Sbjct: 545 NIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFH 604
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 605 HFKGGACSCMDYW 617
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN W+ +I GY +I LY ++ EG+ + ++ +C +
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG++ H IL T +L +G ++ MY +CG + + VFD++P RD +SWT L
Sbjct: 259 GALELGERAH-DYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTL 317
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +A +G E +A+EYF RM+ AG+
Sbjct: 318 IAGFAMHGYAE-------------------------------KALEYFSRMEKAGLTPRE 346
Query: 186 VTLVGVISACAQLGVIK 202
+T V+SAC+ G+++
Sbjct: 347 ITFTAVLSACSHGGLVE 363
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 345/574 (60%), Gaps = 33/574 (5%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F+ + + F W + +GY K +SLY M + P +T LFK T
Sbjct: 66 YARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFT 125
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD----------- 112
+ + LG+++H + G S+++ N +I MY CG + +R +FD
Sbjct: 126 RSVALQLGRELHCHVVKYG-LDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWN 184
Query: 113 ------EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
++DV+SWT ++ + N G +++A F+++P +D V+WTAM+ GY++
Sbjct: 185 AMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCY 244
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
+EA+ F MQ + ++ D T+V V++ACAQLG ++ W+ + + N+ VG+
Sbjct: 245 KEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVK--NDTFVGN 302
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
ALIDMY KCG+++ A IF + QR+ F++++M++G A++G A+ +F M+K P
Sbjct: 303 ALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTP 362
Query: 287 NGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
+ VT++GVL+AC+H G+ +G+ P+ HY CMVDLLG+AG L+EA ++
Sbjct: 363 DEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEI 422
Query: 335 VEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMW 394
++ MP++PN VWGALLGAC+IH++ E+A+ A + ELEP+ Y++ NIYA+ W
Sbjct: 423 IKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKW 482
Query: 395 DDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQA 454
D + +R+++ G+KK PG S +E + G++HEF AGD +HP + EI L + L+
Sbjct: 483 DKLRELRQVMMDRGIKKTPGCSLIEMN-GIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKI 541
Query: 455 DGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLF 514
GY PN V D+++E+K+ + HSEKLA+AFGL+ + PG T+RI+KNLR+C DCH
Sbjct: 542 AGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHV 601
Query: 515 MCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+V RE++VRD RFHHF+ G CSC +YW
Sbjct: 602 AKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 167/423 (39%), Gaps = 105/423 (24%)
Query: 37 ISLYCSMRREGIGPVSFTLS-ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
IS+ CS PV+ +LF+ C + + +QIH++TI G + + + N ++
Sbjct: 2 ISMACSQS----SPVTENPPLSLFETCKSMYHL---KQIHSRTIKTGIICNPI-IQNKIL 53
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
CSR+ GDM A LF+ +P +W
Sbjct: 54 S-------FCCSREF----------------------GDMCYARQLFDTIPEPSVFSWNI 84
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGS 214
M GY + A P+ + + M V+ D T + + ++ + C + +
Sbjct: 85 MFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVK-- 142
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIF-----------------VGMKQRNVFSYS 257
+G +NV +ALI+MYS CG ID A IF +++V S++
Sbjct: 143 -YGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWT 201
Query: 258 SMILGFAMHGRAHA-------------------------------AIQLFGDMVKTETKP 286
+++ GF G+ A A+ LF +M ++ KP
Sbjct: 202 AIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKP 261
Query: 287 NGVTFIGVLTACSHVG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+ T + VLTAC+ +G ++ Y V T ++D+ + G +E AL +
Sbjct: 262 DEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIF 321
Query: 336 EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGM 393
+P + + W A++ I+ E A + + + + PD++ Y+ + + GM
Sbjct: 322 NTLP-QRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEV-TYVGVLSACTHTGM 379
Query: 394 WDD 396
D+
Sbjct: 380 VDE 382
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/585 (40%), Positives = 338/585 (57%), Gaps = 49/585 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V+ N FLW +I+ I +I LY M P +T A+ KAC++
Sbjct: 94 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGV 153
Query: 68 VSLGQQIHAQTILLG-------------------------------GFTSDLYVGNTMIG 96
V+ G Q+HA + G G D N MI
Sbjct: 154 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 213
Query: 97 MYVKCGFLGCSRKVFDEMPERDVVS-WTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
Y++ G + +R++F+ MP+R ++S W +I ++ G +E A F+E+ +D+++W+A
Sbjct: 214 GYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 273
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ GY+Q EA+E F +MQ + L V+SACA LG + W+ A+ +
Sbjct: 274 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 333
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
+ V+G++L+DMY+KCG ID A+ +F M + V S+++MI G AMHGRA AI L
Sbjct: 334 IQL--DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDL 391
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLG 323
F M + PN +TF+GVL AC+H GL K YGV P +HY C+VDLLG
Sbjct: 392 FSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 448
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
RAG L EA K+V +P EP VWGALLGAC+ H N E+ + L ELEP G Y +
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 508
Query: 384 LSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQ 443
LSNIYA AG W++V VR+L+K G+K PG S ++ RG +H+F GD +HP +I Q
Sbjct: 509 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 568
Query: 444 ALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMK 503
L + +RLQ +GY+P+ VL+D+ +EEK+ + HSEKLA+ FGL+ TSPG T+RI+K
Sbjct: 569 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 628
Query: 504 NLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
NLR+CEDCH SQV REI+VRD +R+HHF++G CSC ++W
Sbjct: 629 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 43/206 (20%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M R F+++K ++ W+A+I GYI +G +++ ++ M++E I P F L ++
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 311
Query: 61 ACTEVLDVSLGQQIHA----QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
AC + + G+ IH +I L G +G +++ MY KCG + + +VF++M
Sbjct: 312 ACANLGALDQGRWIHTYAKRNSIQLDGV-----LGTSLVDMYAKCGRIDLAWEVFEKMSN 366
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
++V SW +I A +G E A LF+++ + P E
Sbjct: 367 KEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI-----------------YPNE-------- 401
Query: 177 QYAGVETDYVTLVGVISACAQLGVIK 202
+T VGV++ACA G+++
Sbjct: 402 ---------ITFVGVLNACAHGGLVQ 418
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 83/319 (26%)
Query: 125 LIVAYANNG-----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
L+ +YAN ES+ +F+ + + W M+ ++N +P +AI + M A
Sbjct: 73 LVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVA 132
Query: 180 GVETDYVTLVGVISACAQLGVIK-----YANWVCEIAEGSG------------FGPI--- 219
+ T V+ AC+ GV+ +A+ V G G FG +
Sbjct: 133 HSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEA 192
Query: 220 ----------NNVVVGSALIDMYSKCGSIDDAYRIFVG---------------------- 247
+ V +A+ID Y + G ++ A +F G
Sbjct: 193 RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGM 252
Query: 248 ----------MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
MK+R+ S+S+MI G+ G A+++F M K + +P VL+A
Sbjct: 253 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSA 312
Query: 298 CSHVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C+++G G T YA +VD+ + G ++ A ++ EKM
Sbjct: 313 CANLGALDQGRWIHT--YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEV 369
Query: 345 GVWGALLGACQIHRNPEIA 363
W A++G +H E A
Sbjct: 370 SSWNAMIGGLAMHGRAEDA 388
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 217 GPINNVVVGSALIDMYSKCG-----SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
G + + + +L+ Y+ S + + R+F +++ NVF ++ MI +
Sbjct: 62 GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFK 121
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVD 320
AI L+ +MV ++PN T+ VL ACS H L +G+ + +
Sbjct: 122 AILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIR 181
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+ G L EA ++++ E + W A++ R E+ AA LFE PD+
Sbjct: 182 MYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL--RFGEVE--AARELFEGMPDR 234
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/553 (41%), Positives = 334/553 (60%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ ++ W A+I GY L ++++ + M+ GI P S T+ ++ AC +
Sbjct: 278 LFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA 337
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQIH I GF S+ VGN ++ MY KCG
Sbjct: 338 LEQGQQIHGYAIR-SGFESNDVVGNALVNMYAKCG------------------------- 371
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++ SA LF +P K+ VAW A+++GY Q+ P EA+ F MQ G++ D
Sbjct: 372 ------NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFA 425
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ ACA ++ + SGF +NVVVG+ L+D+Y+KCG+++ A ++F
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFE--SNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +++V S+++MIL + +HG A+ LF M +T TK + + F +LTACSH GL
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543
Query: 304 ----KC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+C YG++P +HYAC+VDLLGRAG L+EA +++ M +EP+ VWGALLGAC+
Sbjct: 544 LQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACR 603
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ + AA HLFEL+PD G Y++LSNIYA A W+DV+++R+++K G+KK PG
Sbjct: 604 IHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGC 663
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S + R V F GD THP S +I L L ++++ GY PN L DV +E K+
Sbjct: 664 SVVAVHRDV-QTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKEN 722
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL +HSEKLA++FG++ TSPG +RIMKNLR+C DCH S+++GREI+VRD RFH
Sbjct: 723 ILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFH 782
Query: 536 HFQDGKCSCGNYW 548
H ++G CSCG+YW
Sbjct: 783 HVKNGFCSCGDYW 795
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 198/429 (46%), Gaps = 85/429 (19%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N +W I GY+ G ++ LY M+R GI P ++ KAC D+ G+++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ I+ GF SD+ VG + MY KCG L +R+VFD MP+RDVVSW +I Y+ NG
Sbjct: 144 -EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 136 ESAGGLFNELPLK---------------------------------------DKVAWTAM 156
A LF+E+ + D + +
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262
Query: 157 VTGYVQNAKPREAIEYFERM-------------------------------QYAGVETDY 185
V Y + A + FERM Q G++ +
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+V V+ ACA L ++ + A SGF +N VVG+AL++MY+KCG+++ AY++F
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFE--SNDVVGNALVNMYAKCGNVNSAYKLF 380
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M ++NV +++++I G++ HG H A+ LF +M KP+ + VL AC+H
Sbjct: 381 ERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALE 440
Query: 302 -GLKCYGVSPSTDHYAC------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G + +G + + + +VD+ + G + A K+ E+MP E + W ++ A
Sbjct: 441 QGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAY 499
Query: 355 QIHRNPEIA 363
IH + E A
Sbjct: 500 GIHGHGEDA 508
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 335/554 (60%), Gaps = 17/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
+ + + P +W ALI G+ ++ + M R G P T ++ AC +
Sbjct: 100 LLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG 159
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
DV LG Q+H + ++ G DL V N ++ MY +C + + K+FD M R VVSWT L+
Sbjct: 160 DVLLGMQVHGR-VVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLL 218
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G ++ A LF +P +D V+WTAM+ GYVQ A+ REA+E F MQ + V D
Sbjct: 219 SGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEF 278
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V VI+ACAQLG ++ WV G + VG+ALIDMYSKCGSI+ A +F
Sbjct: 279 TMVSVITACAQLGALEMGEWVRVYMSRQGIK--MDAFVGNALIDMYSKCGSIERALDVFK 336
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M R+ F+++++ILG A++G AI++F M+ P+ VTFIGVLTAC+H GL
Sbjct: 337 DMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDK 396
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ Y ++P+ HY C++DL GRAG + EAL +++MP+ PN +WG LL AC
Sbjct: 397 GREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAAC 456
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N EI ++ L +++P+ Y +LSNIYA W+DV R+R + G+KK PG
Sbjct: 457 RVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPG 516
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E + G+IHEF AGD +HP S EI L +++ L GY P++ V +V++EEK+
Sbjct: 517 CSLIEMN-GIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQ 575
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
++L HSEKLA+AF LL++ P +RI+KNLR+C DCH + S++ GRE+VVRD RF
Sbjct: 576 KVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRF 635
Query: 535 HHFQDGKCSCGNYW 548
HHF+ G CSC +YW
Sbjct: 636 HHFRHGFCSCKDYW 649
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 77/348 (22%)
Query: 34 KDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
+D+++ Y M G P ++T L KA + + +HA + G
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFG----------- 73
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+G R+ T L+ AYA GD +A L +E V W
Sbjct: 74 ----------MG-----------RNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVW 112
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ-LGVIKYANWVCEIAE 212
A+++G+ + + EA F M AG VT V V+SAC + G + V
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVV 172
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
GSG P ++ V +AL+DMY++C ++ A+++F GM+ R+V S++S++ G GR A
Sbjct: 173 GSGVLP--DLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEA 230
Query: 273 IQLFGDMVKTET-------------------------------KPNGVTFIGVLTACSHV 301
LFG M + +T + T + V+TAC+ +
Sbjct: 231 RDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQL 290
Query: 302 G-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
G ++ Y G+ ++D+ + G +E AL + + M
Sbjct: 291 GALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 342/588 (58%), Gaps = 45/588 (7%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+F VFE V N F++ +I+G + +I Y M P FT LFKAC
Sbjct: 81 NFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKAC 140
Query: 63 TEVLDVSLGQQIHAQTI----------------LLGGF--------------TSDLYVGN 92
T G Q+HA I + G F SD+ N
Sbjct: 141 TAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFN 200
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
MI Y+KCG + ++++F M +++V SW ++ A G +E A LFNE+ K++++
Sbjct: 201 AMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEIS 260
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W+AM+ GY++ +EA+E F MQ + L V++ACA LG + W+
Sbjct: 261 WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVN 320
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
+ + V+G+AL+DMY+KCG +D A+ +F M+++ VF++++MI G MHGRA A
Sbjct: 321 NNSNSF--DAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDA 378
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVD 320
I+LF M K + +PNG+T +GVL+AC+H G+ + YG+ P +HY C+VD
Sbjct: 379 IELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVD 438
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
LLGRAG L EA +++ MP+EP+ VWGALLGAC+ H + E+ + L ELEP G
Sbjct: 439 LLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGR 498
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTE 440
Y +LSNIYA AG WDDV+ VR+L+K G+K + G S ++ D GV+HEF+ GD +HP
Sbjct: 499 YALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFD-GVVHEFKMGDGSHPQMKN 557
Query: 441 IQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVR 500
I L +++ RL+ +G+ PN VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+
Sbjct: 558 IYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIH 617
Query: 501 IMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++KNLR+CEDCH SQV REI+VRD R+HHF+ G CSC ++W
Sbjct: 618 VVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/554 (40%), Positives = 335/554 (60%), Gaps = 17/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
V Q++ N F++ ALIRG + ++S Y R G+ P + T L KAC ++ +
Sbjct: 73 VASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLEN 132
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G Q H Q I GF D YV N+++ MY G + +R VF M DVVSWT +I
Sbjct: 133 APMGMQTHGQAIK-HGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIA 191
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y GD +SA LF+ +P ++ V W+ M++GY +N +A+E FE +Q GV +
Sbjct: 192 GYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETV 251
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VGVIS+CA LG + E + N+++G+A++DMY++CG+++ A +F
Sbjct: 252 MVGVISSCAHLGALAMGEKAHEYVMRNKLSL--NLILGTAVVDMYARCGNVEKAVMVFEQ 309
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +++V ++++I G AMHG A A+ F +M K P +TF VLTACSH G+
Sbjct: 310 LPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERG 369
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +GV P +HY CMVDLLGRAG L +A K V KMPV+PN +W ALLGAC+
Sbjct: 370 LEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACR 429
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N E+ + L E++P+ G+Y++LSNIYA A W DV+ +R+++K G++K PGY
Sbjct: 430 IHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGY 489
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGD-LLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E D G +HEF GD THP +I++ D +L +++ GY N ++D+ +EEK+
Sbjct: 490 SLIEID-GKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKE 548
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA+A+G++ +RI+KNLR+CEDCH S+V E++VRD RF
Sbjct: 549 GALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRF 608
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC +YW
Sbjct: 609 HHFKEGTCSCMDYW 622
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W+ +I GY + ++ + +++ EG+ + + +C +
Sbjct: 203 RELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHL 262
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++G++ H + ++ + +L +G ++ MY +CG + + VF+++PE+DV+ WT L
Sbjct: 263 GALAMGEKAH-EYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTAL 321
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
I A +G E A F+E+ K + +TA++T +E FE M+
Sbjct: 322 IAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMK 377
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VFEQ+ K+ WTALI G + G+ + ++ + M ++G P T +A+ AC+
Sbjct: 305 MVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAG 364
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
V G +I G L M+ + + G L + K +MP
Sbjct: 365 MVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMP 413
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/553 (42%), Positives = 337/553 (60%), Gaps = 29/553 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + N +L+TALI G +L + D I LY M + P S+ ++++ KAC L
Sbjct: 86 IFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLA 145
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H+Q + LG +S+ + +I +Y KCG +R+VFDEMPERDVV+ T +I
Sbjct: 146 LKEGREVHSQVLKLG-LSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMIN 204
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y ++G +KD V WTAM+ G V+N + A+E F MQ V + VT
Sbjct: 205 YYFDHG-------------IKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVT 251
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SAC++LG ++ WV + N VG ALI+MYS+CG ID+A R+F
Sbjct: 252 IVCVLSACSELGALQLGRWVRSYMDKHRIEL--NHFVGGALINMYSRCGDIDEAQRVFEQ 309
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK++NV +Y+SMI+GFA+HG++ A++LF ++K P+ VTF+GVL ACSH GL
Sbjct: 310 MKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELG 369
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG+ P +HY CMVDLLGR G LEEA + M V P+ + GALL AC+
Sbjct: 370 FEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACK 429
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+A+ A L + G YI+LSN Y+S+G W + + VR ++ G++K PG
Sbjct: 430 IHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGC 489
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + IHEF GDL HP +I + L +L L+ +GY P VL+D+ EK+
Sbjct: 490 SSIEVNNE-IHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEW 548
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LA+ +GL++T P T+R++KNLR+C DCHL + S + R+IVVRD RFH
Sbjct: 549 ALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFH 608
Query: 536 HFQDGKCSCGNYW 548
HF++G CSCG+YW
Sbjct: 609 HFENGVCSCGDYW 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 32/278 (11%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
K+ +D EL+ +N + A +F+ + +TA++ G V + +
Sbjct: 54 KIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTD 113
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
I + +M + + D + V+ AC +K V ++ G +N + L
Sbjct: 114 GIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREV--HSQVLKLGLSSNRSIRIKL 171
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFS------------------YSSMILGFAMHGRAH 270
I++Y KCG+ +DA R+F M +R+V + +++MI G +G ++
Sbjct: 172 IELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESN 231
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--VSPSTDHY---------ACMV 319
A+++F +M + + PN VT + VL+ACS +G G V D + ++
Sbjct: 232 RALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALI 291
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
++ R G ++EA ++ E+M E N + +++ +H
Sbjct: 292 NMYSRCGDIDEAQRVFEQMK-EKNVITYNSMIMGFALH 328
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/560 (40%), Positives = 343/560 (61%), Gaps = 19/560 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + VF + N F+W A+IR Y + + Y M + S+T L +AC
Sbjct: 40 YAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACR 99
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+L + Q+H I LG F SD++ N ++ +Y CG + C+R++FD +PERD VSW
Sbjct: 100 NLLAMGEALQVHGLVIKLG-FGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWN 158
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y +GD+++A G+F ++PLK+ V+WT++++G V+ + EA+ MQ AG E
Sbjct: 159 IMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFEL 218
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V + +++ACA LG + W+ +G + V+G AL++MY KCG +++A
Sbjct: 219 DGVAIASLLTACANLGALDQGRWLHFYVLNNGVDV--DRVIGCALVNMYVKCGDMEEALS 276
Query: 244 IFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F +K Q++V+ +++MI GFA+HGR A++ F M + +PN +TF VL ACS+
Sbjct: 277 VFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYG 336
Query: 302 GL-----------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL KC Y V+PS +HY CMVDLLGR+G L+EA ++++KMP++P+ +WGA
Sbjct: 337 GLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGA 396
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL AC IHR+ + HL E++ D G YI L+ I A+ G W + + VR +K G+
Sbjct: 397 LLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGV 456
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDV 468
+PG S + + G++HEF AG HP +IQ L + +RL+ D GY+P + +L D+
Sbjct: 457 PISPGKSSVTLN-GIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDL 515
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK+ + HSEKLA+AFGL+ T PG T+R++KNLRIC DCH SQ+ REI++
Sbjct: 516 ENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIM 575
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFHHF+DG CSC +YW
Sbjct: 576 RDRVRFHHFRDGSCSCKDYW 595
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 25/304 (8%)
Query: 72 QQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
+QI AQ I T L + G L +++VF+ + + W +I AY+
Sbjct: 5 KQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYS 64
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR-----EAIEYFERMQYAGVETDY 185
N+ + E A + ++ L V + ++ A EA++ + G +D
Sbjct: 65 NSDEPELAFLSYQQM-LSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDV 123
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L ++ A G I A + + P + V + +ID Y K G + AY +F
Sbjct: 124 FALNALLHVYALCGEIHCARQLFDNI------PERDAVSWNIMIDGYIKSGDVKTAYGVF 177
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
+ M +NV S++S+I G G++ A+ L +M + +GV +LTAC+++G
Sbjct: 178 LDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALD 237
Query: 303 ----LKCYGVSPSTD---HYAC-MVDLLGRAGCLEEALKMVEKMP-VEPNGGVWGALLGA 353
L Y ++ D C +V++ + G +EEAL + K+ + + +W A++
Sbjct: 238 QGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDG 297
Query: 354 CQIH 357
IH
Sbjct: 298 FAIH 301
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 334/552 (60%), Gaps = 46/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ +N W A+I Y+ ++++ + ++ +EGI P S T +++ C
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ +H I+ G SDL+V N ++ M+V CG
Sbjct: 530 LELGKWVHF-LIMKAGLESDLHVSNALVSMFVNCG------------------------- 563
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D+ SA LFN++P +D V+W ++ G+VQ+ K + A +YF+ MQ +G++ D +T
Sbjct: 564 ------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
G+++ACA + + + + F +V+VG+ LI MY+KCGSI+DA+++F
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEAAFDC--DVLVGTGLISMYTKCGSIEDAHQVFHK 675
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++NV+S++SMI G+A HGR A++LF M + KP+ +TF+G L+AC+H GL
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
K + + P +HY CMVDL GRAG L EA++ + KM VEP+ VWGALLGACQ+
Sbjct: 736 LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H N E+A+ AA EL+P+ G ++ILSNIYA+AGMW +V+++R+++ G+ K PG S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E D G +H F + D THP + EI L L ++ GY P+ R VL+DV D EK++
Sbjct: 856 WIEVD-GKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSE+LA+ +GLL T P + I KNLR+C DCH S++ R+I+ RD+ RFHH
Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974
Query: 537 FQDGKCSCGNYW 548
F+DG CSCG++W
Sbjct: 975 FKDGVCSCGDFW 986
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 50/367 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+ ++ K+ + W L+ GY+ G +++ L+ M ++ + P T ++ AC +
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+V G++++ IL G+ +DL+VG +I M++KCG +G + KV
Sbjct: 225 RNVDKGRELY-NLILKAGWDTDLFVGTALINMHIKCGDIGDATKV--------------- 268
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ LP +D V WT+M+TG ++ + ++A F+RM+ GV+ D
Sbjct: 269 ----------------FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V V ++ AC ++ V A G + VG+A++ MY+KCGS++DA +F
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+K RNV S+++MI GFA HGR A F M+++ +PN VTF+ +L ACS
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H+ YG ++ + + G L++A ++ EK+ + N W A++
Sbjct: 431 RGQQIQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMIT 487
Query: 353 ACQIHRN 359
A H
Sbjct: 488 AYVQHEQ 494
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 178/384 (46%), Gaps = 48/384 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + ++ WT++I G G K + +L+ M EG+ P +L +AC
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++HA+ +G + +++YVG ++ MY KCG
Sbjct: 328 LEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCG------------------------- 361
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME A +F+ + ++ V+WTAM+ G+ Q+ + EA +F +M +G+E + VT
Sbjct: 362 ------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ AC+ +K + + +G+G + V +AL+ MY+KCGS+ DA+R+F
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFEK 473
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ ++NV ++++MI + H + A+ F ++K KPN TF +L C
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G+ +V + G L A + MP + + W ++
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQ 592
Query: 357 HRNPEIAQIAANHLFE--LEPDKI 378
H ++A + E ++PDKI
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKI 616
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 48/344 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T SAL + C + ++ G++I+ I G D+++ NT+I MY KCG ++++FD+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNH-IKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDD 170
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
M E+DV SW L+ GYVQ+ EA +
Sbjct: 171 MREKDVYSWNLLL-------------------------------GGYVQHGLYEEAFKLH 199
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E+M V+ D T V +++ACA + + + +G+ ++ VG+ALI+M+
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWD--TDLFVGTALINMHI 257
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG I DA ++F + R++ +++SMI G A HGR A LF M + +P+ V F+
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 294 VLTACSH---------VGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEP 342
+L AC+H V + V T+ Y ++ + + G +E+AL++ + +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR- 376
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIIL 384
N W A++ H + A + N + E +EP+++ IL
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+KD A++ + + EA++ ER+ + ++ T ++ C + +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+ + SG P ++ + + LI+MY+KCG+ A +IF M++++V+S++ ++ G+ H
Sbjct: 132 IYNHIKKSGVQP--DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------------------------- 299
G A +L MV+ KP+ TF+ +L AC+
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 300 ----HVGLKCYGVSPSTD-----------HYACMVDLLGRAGCLEEALKMVEKMP---VE 341
++ +KC + +T + M+ L R G ++A + ++M V+
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK---IGNYIILSNIYASAGMWDDVS 398
P+ + +LL AC E + + E+ D +G I+ ++Y G +D
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL--SMYTKCGSMEDAL 367
Query: 399 RVRRLLK 405
V L+K
Sbjct: 368 EVFDLVK 374
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 334/552 (60%), Gaps = 46/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ +N W A+I Y+ ++++ + ++ +EGI P S T +++ C
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ +H I+ G SDL+V N ++ M+V CG
Sbjct: 530 LELGKWVHF-LIMKAGLESDLHVSNALVSMFVNCG------------------------- 563
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D+ SA LFN++P +D V+W ++ G+VQ+ K + A +YF+ MQ +G++ D +T
Sbjct: 564 ------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
G+++ACA + + + + F +V+VG+ LI MY+KCGSI+DA+++F
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEAAFDC--DVLVGTGLISMYTKCGSIEDAHQVFHK 675
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++NV+S++SMI G+A HGR A++LF M + KP+ +TF+G L+AC+H GL
Sbjct: 676 LPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
K + + P +HY CMVDL GRAG L EA++ + KM VEP+ VWGALLGACQ+
Sbjct: 736 LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H N E+A+ AA EL+P+ G ++ILSNIYA+AGMW +V+++R+++ G+ K PG S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E D G +H F + D THP + EI L L ++ GY P+ R VL+DV D EK++
Sbjct: 856 WIEVD-GKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSE+LA+ +GLL T P + I KNLR+C DCH S++ R+I+ RD+ RFHH
Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974
Query: 537 FQDGKCSCGNYW 548
F+DG CSCG++W
Sbjct: 975 FKDGVCSCGDFW 986
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 50/367 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+ ++ K+ + W L+ GY+ G +++ L+ M ++ + P T ++ AC +
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+V G++++ IL G+ +DL+VG +I M++KCG +G + KV
Sbjct: 225 RNVDKGRELY-NLILKAGWDTDLFVGTALINMHIKCGDIGDATKV--------------- 268
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ LP +D V WT+M+TG ++ + ++A F+RM+ GV+ D
Sbjct: 269 ----------------FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V V ++ AC ++ V A G + VG+A++ MY+KCGS++DA +F
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+K RNV S+++MI GFA HGR A F M+++ +PN VTF+ +L ACS
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H+ YG ++ + + G L++A ++ EK+ + N W A++
Sbjct: 431 RGQQIQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMIT 487
Query: 353 ACQIHRN 359
A H
Sbjct: 488 AYVQHEQ 494
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 188/410 (45%), Gaps = 49/410 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + ++ WT++I G G K + +L+ M EG+ P +L +AC
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++HA+ +G + +++YVG ++ MY KCG
Sbjct: 328 LEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCG------------------------- 361
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME A +F+ + ++ V+WTAM+ G+ Q+ + EA +F +M +G+E + VT
Sbjct: 362 ------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ AC+ +K + + +G+G + V +AL+ MY+KCGS+ DA+R+F
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFEK 473
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ ++NV ++++MI + H + A+ F ++K KPN TF +L C
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G+ +V + G L A + MP + + W ++
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQ 592
Query: 357 HRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
H ++A + E ++PDKI + L N AS + R+ L+
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKI-TFTGLLNACASPEALTEGRRLHALI 641
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 48/344 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T SAL + C + ++ G++I+ I G D+++ NT+I MY KCG ++++FD+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNH-IKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDD 170
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
M E+DV SW L+ GYVQ+ EA +
Sbjct: 171 MREKDVYSWNLLL-------------------------------GGYVQHGLYEEAFKLH 199
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E+M V+ D T V +++ACA + + + +G+ ++ VG+ALI+M+
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWD--TDLFVGTALINMHI 257
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG I DA ++F + R++ +++SMI G A HGR A LF M + +P+ V F+
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 294 VLTACSH---------VGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEP 342
+L AC+H V + V T+ Y ++ + + G +E+AL++ + +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR- 376
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIIL 384
N W A++ H + A + N + E +EP+++ IL
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+KD A++ + + EA++ ER+ + ++ T ++ C + +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+ + SG P ++ + + LI+MY+KCG+ A +IF M++++V+S++ ++ G+ H
Sbjct: 132 IYNHIKKSGVQP--DIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------------------------- 299
G A +L MV+ KP+ TF+ +L AC+
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 300 ----HVGLKCYGVSPSTD-----------HYACMVDLLGRAGCLEEALKMVEKMP---VE 341
++ +KC + +T + M+ L R G ++A + ++M V+
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK---IGNYIILSNIYASAGMWDDVS 398
P+ + +LL AC E + + E+ D +G I+ ++Y G +D
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL--SMYTKCGSMEDAL 367
Query: 399 RVRRLLK 405
V L+K
Sbjct: 368 EVFDLVK 374
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/554 (40%), Positives = 340/554 (61%), Gaps = 17/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ N F++ LIR + + Y M + I P + T L KA +E+
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V +G+Q H+Q + G F +D+YV N+++ MY CGF+ + ++F +M RDVVSWT ++
Sbjct: 133 VLVGEQTHSQIVRFG-FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y G +E+A +F+E+P ++ W+ M+ GY +N +AI+ FE M+ GV +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V VIS+CA LG +++ E S N+++G+AL+DM+ +CG I+ A +F G
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTV--NLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ + + S+SS+I G A+HG AH A+ F M+ P VTF VL+ACSH GL
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K +G+ P +HY C+VD+LGRAG L EA + KM V+PN + GALLGAC+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
I++N E+A+ N L +++P+ G Y++LSNIYA AG WD + +R ++K +KK PG+
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 416 SWLEGDRGVIHEFRAGD-LTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E D G I++F GD HP +I++ ++L +++ GY+ N +DV +EEK+
Sbjct: 490 SLIEID-GKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKE 548
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ HSEKLA+A+G++ T PG T+RI+KNLR+CEDCH S+V GRE++VRD RF
Sbjct: 549 SSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRF 608
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC +YW
Sbjct: 609 HHFRNGVCSCRDYW 622
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 153/365 (41%), Gaps = 57/365 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++N F W+ +I GY + +I L+ M+REG+ + ++ +C +
Sbjct: 203 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHL 262
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++ + + ++ T +L +G ++ M+ +CG + + VF+ +PE D +SW+ +
Sbjct: 263 GALEFGERAY-EYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSI 321
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G +A+ YF +M G
Sbjct: 322 IKGLAVHG-------------------------------HAHKAMHYFSQMISLGFIPRD 350
Query: 186 VTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT V+SAC+ G+++ + E + + G P + ++DM + G + +A
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP--RLEHYGCIVDMLGRAGKLAEAENF 408
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
+ M + +LG + + G+M+ + KP + +L+
Sbjct: 409 ILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML-IKVKPEHSGYYVLLS-------N 460
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP----VEPNGGVWGALLGACQIHRNP 360
Y + D + D++ K+V+K P +E +G + +G Q H P
Sbjct: 461 IYACAGQWDKIESLRDMMKE--------KLVKKPPGWSLIEIDGKINKFTMGDDQKH--P 510
Query: 361 EIAQI 365
E+ +I
Sbjct: 511 EMGKI 515
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 41/260 (15%)
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A G+F+++ + + ++ + A+P +A ++ +M + + D +T +I A ++
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 198 LGVI---------------------------KYANWVCEIAEGSGFGPI--NNVVVGSAL 228
+ + YAN A G FG + +VV +++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ Y KCG +++A +F M RN+F++S MI G+A + AI LF M + N
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 289 VTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
+ V+++C+H+G +G ++ + +VD+ R G +E+A+ + E
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 338 MPVEPNGGVWGALLGACQIH 357
+P E + W +++ +H
Sbjct: 310 LP-ETDSLSWSSIIKGLAVH 328
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/577 (41%), Positives = 351/577 (60%), Gaps = 36/577 (6%)
Query: 4 FPRLVFEQVKYKNPFLWTALIR--GYILQGHLK-DSISLYCSMRREG-IGPVSFTLSALF 59
+ R VF Q+ N F W ++R HL+ +++ L+ +M +G + P FT ++
Sbjct: 70 YARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVL 129
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF------LGCSRKV-FD 112
KAC + G+QIH I+ GF D +V + ++ MYV C L C V FD
Sbjct: 130 KACARASRLREGKQIHG-LIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 113 -----EMPER----DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
E+ +R +VV W +I GD++SA LF+E+P + V+W M++GY QN
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQN 248
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
EAI F+ MQ + ++ +YVTLV V+ A A++G ++ W+ + G I++V+
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWI-HLYAGKNKIEIDDVL 307
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
GSAL+DMYSKCGSID+A ++F + +RN ++S++I FAMHGRA AI F M K
Sbjct: 308 -GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 284 TKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEA 331
PN V +IG+L+ACSH GL K G+ P +HY CMVDLLGRAG LEEA
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
+++ MP+EP+ +W ALLGAC++H+N ++ + A L EL P G+Y+ LSN+YAS
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 392 GMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDR 451
G W+ V+RVR +K ++K+PG SW+E G+IHEF D +H + EIQ LG++ +
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIE-IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMK 545
Query: 452 LQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDC 511
L+++GY+PN V + ++E+ R L HSEK+A+AFGL++T+P ++I+KNLRICEDC
Sbjct: 546 LRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDC 605
Query: 512 HLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
H + S + R+I+VRD RFH F+ G CSC +YW
Sbjct: 606 HASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/577 (41%), Positives = 350/577 (60%), Gaps = 36/577 (6%)
Query: 4 FPRLVFEQVKYKNPFLWTALIR--GYILQGHLK-DSISLYCSMRREG-IGPVSFTLSALF 59
+ R VF Q+ N F W ++R HL+ +++ L+ +M +G + P FT ++
Sbjct: 70 YARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVL 129
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF------LGCSRKV-FD 112
KAC + G+QIH I+ GF D +V + ++ MYV C L C V FD
Sbjct: 130 KACARASRLREGKQIHG-LIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 113 -----EMPER----DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
E+ +R +VV W +I GD++SA LF+E+P + V+W M++GY QN
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQN 248
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
EAI F+ MQ + ++ +YVTLV V+ A A++G ++ W+ + G I++V+
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWI-HLYAGKNKVEIDDVL 307
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
GSAL+DMYSKCGSID A ++F + +RN ++S++I FAMHGRA AI F M K
Sbjct: 308 -GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 284 TKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEA 331
PN V +IG+L+ACSH GL K G+ P +HY CMVDLLGRAG LEEA
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
+++ MP+EP+ +W ALLGAC++H+N ++ + A L EL P G+Y+ LSN+YAS
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 392 GMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDR 451
G W+ V+RVR +K ++K+PG SW+E G+IHEF D +H + EIQ LG++ +
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIE-IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMK 545
Query: 452 LQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDC 511
L+++GY+PN V + ++E+ R L HSEK+A+AFGL++T+P ++I+KNLRICEDC
Sbjct: 546 LRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDC 605
Query: 512 HLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
H + S + R+I+VRD RFH F+ G CSC +YW
Sbjct: 606 HASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 338/567 (59%), Gaps = 27/567 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE++++K+ F+W ++ GY +G K +++++ M EG+ P S T+++ ACT +
Sbjct: 166 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL 225
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH I + SDL VGN+++ Y KC + +R+ F + + D+VSW +
Sbjct: 226 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 285
Query: 126 --IVAYANNGD----------MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+ + GD M A +F+EL +D V W ++++ Q+ + A++
Sbjct: 286 LAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 345
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M + VE + VT+V + AC++L ++ + + G N ++ ++LIDMY
Sbjct: 346 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL--NSLIDMYG 403
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
+CGSI + RIF M QR++ S++ MI + MHG A+ LF KPN +TF
Sbjct: 404 RCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTN 463
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+L+ACSH GL Y + P+ + YACMVDLL RAG E L+ +EKMP E
Sbjct: 464 LLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFE 523
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
PN VWG+LLGAC+IH NP++A+ AA +LFELEP GNY++++NIY++AG W+D +++R
Sbjct: 524 PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIR 583
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+K G+ K PG SW+E R +H F GD +HP +I + L ++ GY P+
Sbjct: 584 CLMKERGVTKPPGCSWIEVKRK-LHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 642
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
VL DV ++EK+ L HSEK+ALAFGL++T+ G +RI+KNLR+C DCH S+V
Sbjct: 643 NFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKV 702
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
R+I++RDN RFHHF DG CSCG+YW
Sbjct: 703 EKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 157/308 (50%), Gaps = 47/308 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N F WTA++ Y G +++I L+ M EG+ P F +FKAC+E+
Sbjct: 65 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G+ ++ +L GF + V +++ M++KCG + +R+ F+E+ +DV W +
Sbjct: 125 KNYRVGKDVY-DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 183
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y + G+ ++A+ F +M GV+ +
Sbjct: 184 VSGYTSKGEF-------------------------------KKALNVFRKMVLEGVKPNS 212
Query: 186 VTLVGVISACAQLGVIKYANWV---CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+T+ +SAC L ++++ + C E ++++VG++L+D Y+KC S++ A
Sbjct: 213 ITIASAVSACTNLSLLRHGREIHGYCIKVEELD----SDLLVGNSLVDYYAKCRSVEVAR 268
Query: 243 RIFVGMKQRNVFSYSSM--ILGFAMHGRAHAAIQLFGDM-----VKTE-TKPNGVTFIGV 294
R F +KQ ++ S+++M + GF +G AA++ F M V +E + + V + +
Sbjct: 269 RKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSI 328
Query: 295 LTACSHVG 302
++AC+ G
Sbjct: 329 ISACAQSG 336
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+++ + C ++ ++ LG Q+HAQ ++ G D+ C FLG
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNG---VDV------------CEFLG---------- 48
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+ L+ Y G +E A +F+++ ++ +WTA++ Y E I+ F
Sbjct: 49 -------SRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 101
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M GV D+ V AC++L + V + GF N V +++DM+ KC
Sbjct: 102 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE--GNSCVKGSILDMFIKC 159
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +D A R F ++ ++VF ++ M+ G+ G A+ +F MV KPN +T +
Sbjct: 160 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAV 219
Query: 296 TACSHVGLKCYG 307
+AC+++ L +G
Sbjct: 220 SACTNLSLLRHG 231
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/557 (43%), Positives = 342/557 (61%), Gaps = 23/557 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE- 64
R F+ + ++ W A++ GY G ++ + L+ M GI P T + AC+
Sbjct: 214 RRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSR 273
Query: 65 ---VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVV 120
L SL + +H + I L F V ++ MY KCG +G +R++FDE+ R+ V
Sbjct: 274 GDPCLAASLVRTLHQKQIQLNCF-----VRTALLDMYAKCGSIGAARRIFDELGAYRNSV 328
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W +I AY G+++SA LFN +P ++ V W +M+ GY QN + AIE F+ M A
Sbjct: 329 TWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAK 388
Query: 181 VET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG-SALIDMYSKCGSI 238
T D VT+V VISAC LG ++ NWV + I + G +A+I MYS+CGS+
Sbjct: 389 KLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN---QIKLSISGHNAMIFMYSRCGSM 445
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+DA R+F M R+V SY+++I GFA HG AI L M + +P+ VTFIGVLTAC
Sbjct: 446 EDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTAC 505
Query: 299 SHVGLKCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
SH GL G P+ DHYACMVDLLGR G LE+A + +E+MP+EP+ GV+G+LL
Sbjct: 506 SHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 565
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
A +IH+ E+ ++AAN LFELEPD GN+I+LSNIYASAG W DV R+R +K G+KK
Sbjct: 566 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 625
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G+SW+E G +H+F D +H S +I Q L +L +++ GY + VL DV +E
Sbjct: 626 TTGWSWVEYG-GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEE 684
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ I+ THSEKLA+ + LL + GA +R++KNLR+C DCH + S++ GR I+VRDN
Sbjct: 685 EKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDN 744
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH F DG CSC +YW
Sbjct: 745 NRFHCFNDGLCSCKDYW 761
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 192/413 (46%), Gaps = 87/413 (21%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ L+F N F++T+++R Y LQ H K + ++ M+ G+ P +F L K+
Sbjct: 52 YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAK-VVLMFEHMQGCGVRPDAFVYPILIKSA 110
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--------- 113
+ G HA + LG SD +V N +I MY + G +G +RKVFDE
Sbjct: 111 G-----NGGIGFHAHVLKLG-HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVA 164
Query: 114 ------------------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
MPER+V++WT ++ YA D+E+A F+ +P +
Sbjct: 165 DWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERS 224
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
V+W AM++GY QN E + F+ M AG+E D T V VISAC+ G A +
Sbjct: 225 VVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF---------------------VG- 247
N V +AL+DMY+KCGSI A RIF VG
Sbjct: 285 TLHQKQIQL--NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGN 342
Query: 248 ----------MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLT 296
M RNV +++SMI G+A +G++ AI+LF +M+ + P+ VT + V++
Sbjct: 343 LDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 402
Query: 297 ACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
AC H+G G + S + M+ + R G +E+A ++ ++M
Sbjct: 403 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 336/555 (60%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+++ + + W +I GY GH D++ L+ MR + P S L + AC
Sbjct: 176 RLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHA 235
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++S G+ IH + + G+ D ++ +I MY CG + +RK++D + + ++ T +
Sbjct: 236 GNLSYGRTIH-EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAM 294
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA G ++ A +F+++ +D V W+AM++GY ++ +P+EA++ F+ M D
Sbjct: 295 LSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQ 354
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T++ VISAC+ +G + ANW+ + SGFG + V +ALIDMY+KCG++ A +F
Sbjct: 355 ITMLSVISACSHVGALAQANWIHTYVDRSGFG--RALSVNNALIDMYAKCGNLVKAREVF 412
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++NV S+SSMI FAMHG A +AI+LF M + +PNGVTFIGVL AC H GL
Sbjct: 413 ENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVE 472
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+SP+ +HY CMVDL RA L +A++++E MP PN +WG+L+ A
Sbjct: 473 EGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSA 532
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
CQ+H E+ + AA L ELEPD G ++LSNIYA W+DV +R+ + G+ K
Sbjct: 533 CQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEK 592
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
S +E + V H F D H S EI + L +++ +L+ GY+P+ +L D+ +E+K
Sbjct: 593 ASSRIEINNQV-HMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDK 651
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
K +++ HSEKLA+ +GL++ + +RI+KNLRICEDCH FM S+V EIVVRD R
Sbjct: 652 KELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTR 711
Query: 534 FHHFQDGKCSCGNYW 548
FHH G CSC +YW
Sbjct: 712 FHHCSGGICSCRDYW 726
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 177/401 (44%), Gaps = 82/401 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTEVL 66
VF Q+ + L+R + +I LY ++R F+ +L KA ++V
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G +IH LG F D ++ +I MY C R++ D
Sbjct: 136 AFNHGLEIHGLASKLG-FVDDPFIQTGLIAMYASC------RRIMD-------------- 174
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A LF+++ D VAW ++ GY QN +A+ FE M+ + ++ D V
Sbjct: 175 -----------ARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSV 223
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID------- 239
L V+SAC G + Y + E + +G+ ++ + +ALI+MY+ CG++D
Sbjct: 224 ILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSH--LQTALINMYANCGAMDLARKIYD 281
Query: 240 ------------------------DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
DA IF M +R++ +S+MI G+A + A++L
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKC-------------YGVSPSTDHYACMVDLL 322
F +M++ + P+ +T + V++ACSHVG +G + S ++ ++D+
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNN--ALIDMY 399
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ G L +A ++ E MP N W +++ A +H N + A
Sbjct: 400 AKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNADSA 439
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/553 (41%), Positives = 347/553 (62%), Gaps = 17/553 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N +L+TALI G++ G+ ++I LY M E I P ++ ++++ KAC L
Sbjct: 103 IFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLA 162
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H++ + LG F+S+ V ++ +Y KCG LG +R+VF+EMPE DVV+ T +I
Sbjct: 163 LREGREVHSRALKLG-FSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMIS 220
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+Y++ G +E AG +F+ + KD V WTAM+ G+V+N + A+E F MQ V + T
Sbjct: 221 SYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFT 280
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SAC+QLG ++ WV F N+ VG+ALI+MYS+CGSID+A +F
Sbjct: 281 IVCVLSACSQLGALEIGRWVHSYMRK--FEIELNLFVGNALINMYSRCGSIDEAQTVFDE 338
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK R+V +Y++MI G +M+G++ AI+LF MV +P VTF+GVL ACSH GL
Sbjct: 339 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 398
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V P +HY CMVDLLGR G LEEA ++ M + P+ + G LL AC+
Sbjct: 399 FEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 458
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N E+ + A L + G Y++LS++YAS+G W + ++VR +K G++K PG
Sbjct: 459 MHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 518
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + IHEF GDL HP I + L +L L+ +GY P VL D+ D EK+
Sbjct: 519 SSIEVN-NEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEW 577
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LA+ +GL++T P +R+MKNLR+C DCH + +++ R+IVVRD RFH
Sbjct: 578 ALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFH 637
Query: 536 HFQDGKCSCGNYW 548
+F++G CSCG+YW
Sbjct: 638 YFENGACSCGDYW 650
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IHAQ ++ G + D ++ ++ KC + + ++F +V +T LI + ++G
Sbjct: 68 IHAQ-LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 126
Query: 134 DMESAGGLF----NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
+ A L+ +E L D +++ RE E R G ++ + +
Sbjct: 127 NYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRL 186
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
++ + G + A V E +VV + +I YS G +++A +F ++
Sbjct: 187 RIMELYGKCGELGDARRVFEEMP-------EDVVASTVMISSYSDQGLVEEAGAVFSRVR 239
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------- 302
+++ +++MI GF + + A++ F M +PN T + VL+ACS +G
Sbjct: 240 RKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRW 299
Query: 303 ----LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
++ + + + ++++ R G ++EA + ++M
Sbjct: 300 VHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ SKC +ID A RIF NV+ Y+++I GF G AIQL+ M+ P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 146
Query: 288 GVTFIGVLTAC-SHVGLK----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+L AC S + L+ G S + +++L G+ G L +A ++ E
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 337 KMP 339
+MP
Sbjct: 207 EMP 209
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/558 (39%), Positives = 332/558 (59%), Gaps = 17/558 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ ++VF+ + FLW +IRG+ + S+ LY M ++T +L KAC+
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ QIHAQ LG + +D+Y N++I Y G + +FD +PE D VSW
Sbjct: 127 NLSAFEETTQIHAQITKLG-YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y G M+ A LF ++ K+ ++WT M++GYVQ +EA++ F MQ + VE
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+L +SACAQLG ++ W+ + + V+G LIDMY+KCG +++A
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRM--DSVLGCVLIDMYAKCGEMEEALE 303
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F +K+++V +++++I G+A HG AI F +M K KPN +TF VLTACS+ GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P+ +HY C+VDLLGRAG L+EA + +++MP++PN +WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH+N E+ + L ++P G Y+ +NI+A WD + RRL+K G+ K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD-VSD 470
PG S + + G HEF AGD +HP +IQ + +L+ +GY P L +L D V D
Sbjct: 484 VPGCSTISLE-GTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDD 542
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+E++ I+ HSEKLA+ +GL+ T PG +RIMKNLR+C+DCH S++ R+IV+RD
Sbjct: 543 DEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRD 602
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DGKCSCG+YW
Sbjct: 603 RTRFHHFRDGKCSCGDYW 620
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 347/553 (62%), Gaps = 17/553 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N +L+TALI G++ G+ D+I LY M + I P ++ ++++ KAC L
Sbjct: 103 IFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLA 162
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H++ + LG +S+ V ++ +Y KCG LG +R+VF+EMPE DVV+ T +I
Sbjct: 163 LREGREVHSRALKLG-LSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMIS 220
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+Y++ G +E AG +F+ + KD V WTAM+ G+V+N + A+E F MQ V + T
Sbjct: 221 SYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFT 280
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SAC+QLG ++ WV F N+ VG+ALI+MYS+CGSID+A +F
Sbjct: 281 IVCVLSACSQLGALEIGRWVHSYMRK--FEIELNLFVGNALINMYSRCGSIDEAQTVFDE 338
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK R+V +Y++MI G +M+G++ AI+LF M+ +P VTF+GVL ACSH GL
Sbjct: 339 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFG 398
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YGV P +HY CMVDLLGR G LEEA ++ M + P+ + G LL AC+
Sbjct: 399 FKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 458
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N E+ + A L + G Y++LS++YAS+G W + ++VR +K G++K PG
Sbjct: 459 MHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 518
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + IHEF GDL HP I + L +L L+ +GY P VL D+ D EK+
Sbjct: 519 SSIEVN-NEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEW 577
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LA+ +GL++T P +R+MKNLR+C DCH + +++ R++VVRD RFH
Sbjct: 578 ALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFH 637
Query: 536 HFQDGKCSCGNYW 548
+F++G CSCG+YW
Sbjct: 638 YFENGACSCGDYW 650
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 125/280 (44%), Gaps = 23/280 (8%)
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IHAQ ++ G + D ++ ++ KC + + ++F +V +T LI + ++G
Sbjct: 68 IHAQ-LIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 126
Query: 134 DMESAGGLFNEL----PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
+ A L++ + L D +++ RE E R G+ ++ + +
Sbjct: 127 NYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRL 186
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
++ + G + A V E +VV + +I YS G +++A +F ++
Sbjct: 187 RIMELYGKCGELGDARRVFEEMP-------EDVVASTVMISSYSDQGLVEEAGAVFSRVR 239
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------- 302
+++ +++MI GF + + A++ F M +PN T + VL+ACS +G
Sbjct: 240 RKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRW 299
Query: 303 ----LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
++ + + + ++++ R G ++EA + ++M
Sbjct: 300 VHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ SKC +ID A RIF NV+ Y+++I GF G AIQL+ M+ P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 288 GVTFIGVLTAC-SHVGLK----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+L AC S + L+ G+S + +++L G+ G L +A ++ E
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 337 KMP 339
+MP
Sbjct: 207 EMP 209
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/588 (39%), Positives = 344/588 (58%), Gaps = 51/588 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + N F++ ALIRG + S+S + M R I P TL + K+ ++D
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE-------------- 113
V LG+ +H + LG D +V +++ MYVK G LG ++FDE
Sbjct: 154 VGLGRCLHGGVMKLG-LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212
Query: 114 ---------------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
MPER+ SW LI + NGD++ A LF ++P K+ V+
Sbjct: 213 VLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVS 272
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
WT M+ G+ QN +A+ F RM GV + +T+V + AC ++G ++ +
Sbjct: 273 WTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLS 332
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
+GF N +G+AL+DMY+KCG+I A R+FV K +++ ++S MI G+A+HG A
Sbjct: 333 SNGFQL--NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQA 390
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKC-YGVSPSTDHYACMVD 320
+Q F M P+ V F+ +LTACSH G ++ Y + P+ HY +VD
Sbjct: 391 LQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVD 450
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
LLGRAG L+EAL ++ MP+ P+ +WGAL AC+ H+N E+A++ A L +LEP G+
Sbjct: 451 LLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGS 510
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTE 440
Y+ LSN+YA+ G W+DV RVR L+K G++K+PG+S++E + G +H F AGD H + E
Sbjct: 511 YVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVE-GQVHSFVAGDHAHVRAEE 569
Query: 441 IQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVR 500
I L ++ + +GY P VL+++ +EEK+ L +HSEKLALAFGL++T+PG+T+R
Sbjct: 570 ISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIR 629
Query: 501 IMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
I+KNLR+C DCH M AS++ REI++RD RFHHF+DG CSCG+YW
Sbjct: 630 IVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F Q+ KN WT +I G+ G + ++S++ M EG+ P T+ + ACT++
Sbjct: 259 RELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKI 318
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IH + GF + +G ++ MY KCG + + +VF E +D+++W+ +
Sbjct: 319 GALQVGERIH-NYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVM 377
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +A +G + +A++ F +M+ AG+ D
Sbjct: 378 IWGWAIHGCFD-------------------------------QALQCFVKMKSAGINPDE 406
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V + +++AC+ G + N+ + P + ++D+ + G +D+A
Sbjct: 407 VIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHY--TLIVDLLGRAGRLDEALSF 464
Query: 245 FVGM 248
M
Sbjct: 465 IQSM 468
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 32/239 (13%)
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
ET ++ L+ + QL I ++ + +N V + LI S+D A
Sbjct: 40 ETHFIPLIHASNTLPQLHQIHAQIFLHNL--------FSNSRVVTQLISSSCSLKSLDYA 91
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA---- 297
IF N+F ++++I G A + R ++ F M++ +P+ +T VL +
Sbjct: 92 LSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAAL 151
Query: 298 -------CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG---VW 347
C H G+ G+ + +VD+ + G L L++ ++ P +W
Sbjct: 152 VDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLW 211
Query: 348 GALL-GACQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLL 404
L+ G C++ ++++ A+ LFE P++ G++ L N + G D+ R R L
Sbjct: 212 NVLINGCCKV---GDLSKAAS--LFEAMPERNAGSWNSLINGFVRNG---DLDRARELF 262
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/554 (40%), Positives = 338/554 (61%), Gaps = 19/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ + + +T+ I + +GH +++L M +G+ P + TLSA AC
Sbjct: 345 LLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACR---G 401
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTELI 126
+S G+ +H L D YV ++GMY + G +R +FD+M P+ VVS T ++
Sbjct: 402 LSPGRALHGYAFKLA-LAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAML 460
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA+ G ++ A LF+ LP KD V W AM+ GY Q+ +P EA+ F RM +GVE D V
Sbjct: 461 TCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEV 520
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V V+SA AQLG ++ W+ + S ++ V VG+ALIDMY KCGS+ DA +F
Sbjct: 521 TVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLS-VRVGTALIDMYCKCGSLGDAVDVFH 579
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
G+ +++ +++MI G+AMHG + A+++F + P +TFIG+L ACSH G+
Sbjct: 580 GIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEE 639
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P +HY CMVDLLGRAG ++EA +V+ M + P+ +W +LL AC
Sbjct: 640 GREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAAC 699
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N + Q A++L G YI+LSNIYA+ G W +V+RVR ++K +G++K PG
Sbjct: 700 RLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPG 759
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E DR V +EF AGD++HP + EI L + ++ G+ P VL+D+ + K+
Sbjct: 760 CSSIEIDREV-YEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKE 818
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L HSEKLALAFGL++T PGAT++I+KNLR C DCH + S++ GR+IV RD RF
Sbjct: 819 KALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRF 878
Query: 535 HHFQDGKCSCGNYW 548
HHF DG CSCG+YW
Sbjct: 879 HHFVDGSCSCGDYW 892
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A+I GY G +++ L+ M G+ P T+ + A ++
Sbjct: 473 RSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQL 532
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ +H+ + VG +I MY KCG LG + VF + ++D+V W +
Sbjct: 533 GTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAM 592
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +GD R+A+E F + + G+
Sbjct: 593 INGYAMHGD-------------------------------SRKALEMFVQSREQGLWPTD 621
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G+++AC+ G+++ + E +G + ++D+ + G I +A+ +
Sbjct: 622 ITFIGLLNACSHSGMVEEGREFFQSMERE-YGIDPKIEHYGCMVDLLGRAGLIKEAFCLV 680
Query: 246 VGMK 249
MK
Sbjct: 681 QSMK 684
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 339/568 (59%), Gaps = 26/568 (4%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYIL-----QGHLKDSISLYCSMRREGIGPVSFTLS 56
+ P L F ++ FLW LIR ++ G IS++ MR G+ P T
Sbjct: 10 STHPTLHFSHPTLES-FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFP 68
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
L ++ + LG+ +HAQ IL G D +V ++I MY CG LG +R+VFDE+P+
Sbjct: 69 FLLQSFASPSLLHLGRSVHAQ-ILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQ 127
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
D+ SW +I A G ++ A LF +P ++ ++W+ M+ GYV+ + +EA+ F M
Sbjct: 128 PDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM 187
Query: 177 QYAGV---ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
Q GV + T+ GV++AC +LG +++ W + G P++ VV+G+ALIDMY+
Sbjct: 188 QMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM-PVD-VVLGTALIDMYA 245
Query: 234 KCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
KCGS++ A +F + ++V ++S+MI G AMHG A + LF M+ +PN VTF+
Sbjct: 246 KCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFL 305
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
V AC H GL + Y + P+ HY CMVDL GRAG ++EA +V+ MP+
Sbjct: 306 AVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPM 365
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ VWGALL ++H + E ++A L ELEP G Y++LSN+YA G W+DV V
Sbjct: 366 EPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHV 425
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R L++ G+KK PG S +E GV+HEF GD +HP + +I L ++L+RL+ +GY N
Sbjct: 426 RDLMETMGIKKVPGCSLIEVG-GVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGN 484
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ VL D+ +E K+ L HSEKLALA+G L TSPG +RI+KNLRIC DCH+ + S+
Sbjct: 485 TKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISK 544
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V REI+VRD RFHHF G CSC +YW
Sbjct: 545 VFDREIIVRDCNRFHHFTQGLCSCRDYW 572
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 333/554 (60%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ +N W A+I Y+ ++++ + ++ +EGI P S T +++ C
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ + + I+ GF SDL++ N ++ M+V CG
Sbjct: 522 DALELGKWVQS-LIIRAGFESDLHIRNALVSMFVNCG----------------------- 557
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+ SA LFN++P +D V+W ++ G+VQ+ + + A +YF+ MQ +GV+ D
Sbjct: 558 --------DLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQ 609
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T G+++ACA + + + + +VVVG+ LI MY+KCGSIDDA+ +F
Sbjct: 610 ITFTGLLNACASPEALTEGRRLHALITEAALDC--DVVVGTGLISMYTKCGSIDDAHLVF 667
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ ++NV+S++SMI G+A HGR A++LF M + KP+ +TF+G L+AC+H GL
Sbjct: 668 HNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIK 727
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K + + P +HY CMVDL GRAG L EA++ + KM V+P+ +WGALLGAC
Sbjct: 728 EGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGAC 787
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
Q+H + E+A+ A EL+P+ G Y+ILSNIYA+AGMW +V+++R+++ G+ K PG
Sbjct: 788 QVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPG 847
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E D G +H F + D THP EI LG L ++ GY P+ R VL+DV D EK+
Sbjct: 848 QSWIEVD-GRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKE 906
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSE+LA+A+GLL T P + I KNLR+C DCH S++ R+I+ RD+ RF
Sbjct: 907 HALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRF 966
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSCG++W
Sbjct: 967 HHFKDGVCSCGDFW 980
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 48/384 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+++ K+ + W L+ GY+ +++ L+ M ++G+ P +T + AC +
Sbjct: 159 KQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADA 218
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+V G ++ + IL G+ +DL+VG +I M++KCG
Sbjct: 219 KNVDKGGELFS-LILNAGWDTDLFVGTALINMHIKCG----------------------- 254
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ A +FN LP +D + WT+M+TG ++ + ++A F+ M+ GV+ D
Sbjct: 255 --------GVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V V ++ AC ++ V A G + VG+AL+ MY+KCGS++DA +F
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVH--ARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+K RNV S+++MI GFA HGR A F M+++ +PN VTF+ +L ACS
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G ++ + + G L +A + E++ + N W A++ A
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAY 483
Query: 355 QIHRNPEIAQIAANHLFE--LEPD 376
H + A L + ++PD
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPD 507
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + ++ WT++I G K + +L+ M EG+ P +L KAC
Sbjct: 262 VFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++HA+ +G +++YVG ++ MY KCG
Sbjct: 322 LEQGKRVHARMKEVG-LDTEIYVGTALLSMYTKCG------------------------- 355
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME A +FN + ++ V+WTAM+ G+ Q+ + EA +F +M +G+E + VT
Sbjct: 356 ------SMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVT 409
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ AC++ +K + + +G+ I + V +AL+ MY+KCGS+ DA +F
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGY--ITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ ++NV ++++MI + H + A+ F ++K KP+ TF +L C
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF VK +N WTA+I G+ G ++++ + M GI P T ++ AC+
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIH + I+ G+ +D V ++ MY KCG L +R V
Sbjct: 423 LKQGRQIHDR-IIKAGYITDDRVRTALLSMYAKCGSLMDARNV----------------- 464
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F + ++ VAW AM+T YVQ+ K A+ F+ + G++ D T
Sbjct: 465 --------------FERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSST 510
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+++ C ++ WV + +GF +++ + +AL+ M+ CG + A +F
Sbjct: 511 FTSILNVCKSPDALELGKWVQSLIIRAGFE--SDLHIRNALVSMFVNCGDLMSAMNLFND 568
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
M +R++ S++++I GF HG A F M ++ KP+ +TF G+L AC+
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACA 620
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 188/398 (47%), Gaps = 34/398 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
PRLV + ++ L+T G +G + + + + R L +A
Sbjct: 33 PRLVILE-EFDTFRLYTTSFSGSYSKGQGNEFVDIKNTQRANAFLNRLSKAGQLSEAMLV 91
Query: 65 VLDV-SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP----ERDV 119
+L V S QIH QT ++++ + +K LG ++ + + + D+
Sbjct: 92 LLSVDSPHIQIHRQTY------------SSLLQLCIKHKNLGDGERIHNHIKFSKIQPDI 139
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
W LI YA G+ SA +F+E+P KD +W ++ GYVQ+ + EA E+M
Sbjct: 140 FMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQD 199
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
GV+ D T V +++ACA + + + +G+ ++ VG+ALI+M+ KCG +D
Sbjct: 200 GVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWD--TDLFVGTALINMHIKCGGVD 257
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA ++F + +R++ +++SMI G A H + A LF M + +P+ V F+ +L AC+
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317
Query: 300 H---------VGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
H V + V T+ Y ++ + + G +E+AL+ V + N W
Sbjct: 318 HPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE-VFNLVKGRNVVSWT 376
Query: 349 ALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIIL 384
A++ H E A + N + E +EP+++ IL
Sbjct: 377 AMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/525 (43%), Positives = 330/525 (62%), Gaps = 20/525 (3%)
Query: 40 YCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYV 99
Y M G+ +FTL + K+C ++ V +G+ +H Q + +G D YVG ++I MYV
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG-LEGDFYVGASLIDMYV 153
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
KCG +G +RK+FD+M RD+ SW LI Y G++ A LF + ++ V+WTAM++G
Sbjct: 154 KCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISG 213
Query: 160 YVQNAKPREAIEYFERMQYAGVE--TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG 217
Y QN +A+ F+ M G E ++VT+V V+ ACAQ ++ + + A G G
Sbjct: 214 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH 273
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
N V +AL MY+KC S+ +A F + +N+ ++++MI +A HG A+ +
Sbjct: 274 L--NSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLG 323
F +M++ +P+ VTF+G+L+ CSH GL + V P +HYAC+VDLLG
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
RAG L EA +++ +MP++ VWGALL AC+ HRN EIA++AA LF LEPD GNY++
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVL 451
Query: 384 LSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQ 443
LSN+YA AGMW++V ++R LLK G+KK+PG SW+E + G H F D +HP + EI +
Sbjct: 452 LSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEIN-GKSHLFMGADKSHPQAKEIYK 510
Query: 444 ALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMK 503
L L ++++ GY P+ VL+D+S+EEK+ L THSEKLA+AFGLL T PG +R+ K
Sbjct: 511 FLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTK 570
Query: 504 NLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
NLRIC DCH S++ REI+VRD RFH F+DG CSCG+YW
Sbjct: 571 NLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 40/200 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTEV 65
+FE+++++N WTA+I GY G + ++ L+ M ++G + P T+ ++ AC +
Sbjct: 195 LFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQS 254
Query: 66 LDVSLGQQIH--AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE--RDVVS 121
+ G++IH A I G + V + GMY KC L +R FD + + +++++
Sbjct: 255 AALERGRRIHDFANGI---GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIA 311
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I AYA++G G EA+ FE M AGV
Sbjct: 312 WNTMITAYASHG------------------------CGV-------EAVSIFENMLRAGV 340
Query: 182 ETDYVTLVGVISACAQLGVI 201
+ D VT +G++S C+ G+I
Sbjct: 341 QPDAVTFMGLLSGCSHSGLI 360
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/561 (41%), Positives = 345/561 (61%), Gaps = 20/561 (3%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D+ RL F++ +N L+ ++ Y QG ++++++ M ++G P T+ +
Sbjct: 283 IDAAKRL-FDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS 341
Query: 61 ACTEVLDVSLGQQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
A +++D+ G+ H I G G+ S +GN +I MY+KCG + +VFD M +
Sbjct: 342 ASAQLVDLFYGKVCHGYVIRNGLEGWDS---IGNVIIDMYMKCGKPEMACRVFDLMSNKT 398
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VVSW L + NGD+ESA +FN++P ++ V W M++G VQ + +AIE F MQ
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQG 458
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G++ D VT++G+ SAC LG + A WV E +G P + + + +AL+DM+++CG
Sbjct: 459 EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI-PCD-MRLNTALVDMFARCGDP 516
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M +R+V ++++ I AM G A LF M+ KP+ V F+ VLTAC
Sbjct: 517 QSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTAC 576
Query: 299 SHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
SH G ++ +G+SP +HY CMVDLLGRAG L EA +++ MP+EPN VW
Sbjct: 577 SHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVW 636
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LL AC++H+N E+A AA + EL P + G +++LSNIYASAG W DV+RVR L+
Sbjct: 637 GSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREK 696
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G++K PG S ++ + GVIHEF +GD +HP T I L ++ R G+ P+L +VL D
Sbjct: 697 GVRKVPGSSSVQVN-GVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLD 755
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V ++EK+ +L HSEKLA+AFGL+ T +R++KNLR+C DCH F AS + REI+
Sbjct: 756 VDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREII 815
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRDN RFH F+ G CSC +YW
Sbjct: 816 VRDNNRFHFFRQGLCSCCDYW 836
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 147/295 (49%), Gaps = 39/295 (13%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F+ +LIRGY G +++I LY M G+ P +T + CT++ G Q+H
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ +G D+++ N +I Y +CG + KVF+ M ER+V
Sbjct: 157 VVKMG-LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNV------------------ 197
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
V+WT+++ GY + +P+EA+ F M AG+ VT+V VISACA+
Sbjct: 198 -------------VSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAK 244
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
L + VC G +N V+V +AL+DMY KCG+ID A R+F RN+ Y+
Sbjct: 245 LRDLDMGERVCAYIGELGL-KLNKVMV-NALVDMYMKCGAIDAAKRLFDECVDRNLVLYN 302
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYG 307
+++ +A G A A+ + +M++ +P+ VT + ++A + + G C+G
Sbjct: 303 TILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG 357
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 182/419 (43%), Gaps = 87/419 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + +N WT+LI GY K+++SL+ M GI P S T+ + AC ++ D
Sbjct: 188 VFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRD 247
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+++ A LG + + V N ++ MY+KCG + ++++FDE +R++V + ++
Sbjct: 248 LDMGERVCAYIGELGLKLNKVMV-NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILS 306
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA G REA+ + M G D VT
Sbjct: 307 NYARQG-------------------------------LAREALAILDEMLQQGPRPDRVT 335
Query: 188 LVGVISACAQLGVIKYANWVCE---IAEG-SGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ ISA AQL + Y VC I G G+ I NV+ IDMY KCG + A R
Sbjct: 336 MLSAISASAQLVDLFYGK-VCHGYVIRNGLEGWDSIGNVI-----IDMYMKCGKPEMACR 389
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHA-------------------------------A 272
+F M + V S++S+ GF +G + A
Sbjct: 390 VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDA 449
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDL 321
I+LF +M K + VT +G+ +AC ++G ++ G+ +VD+
Sbjct: 450 IELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDM 509
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF--ELEPDKI 378
R G + A+++ KM E + W A +G + N E A N + ++PD +
Sbjct: 510 FARCGDPQSAMQVFNKM-TERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVV 567
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMES------AGGLFNELPLKDKVAW--TAMVT 158
++ D++P + T+L+ A A ES A LF E D + +++
Sbjct: 49 TKNGLDQIPS----TLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIR 104
Query: 159 GYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG--- 215
GY REAI + RM GV ++ T V+S C ++ CE + G
Sbjct: 105 GYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAF------CEGIQVHGSVV 158
Query: 216 -FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G +V + + LI Y++CG +D +++F GM +RNV S++S+I G+A R A+
Sbjct: 159 KMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVS 218
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHV 301
LF +MV+ +P+ VT + V++AC+ +
Sbjct: 219 LFFEMVEAGIRPSSVTMVCVISACAKL 245
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/573 (40%), Positives = 345/573 (60%), Gaps = 32/573 (5%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
+ R +F + N F + LIR D++ ++ M + + P FT ++FKAC
Sbjct: 63 YARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKAC 122
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF---------DE 113
+ G+Q+H + G SD +V + ++ MY+ CG + + ++F D
Sbjct: 123 GRAERLREGRQVHGLAVKFG-LDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDG 181
Query: 114 MPER------DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
+ ++ DVV W +I Y G++E A LF+E+P + V+W M+ GY Q+ +
Sbjct: 182 IRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFK 241
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EA+E F MQ A V +YVTLV V+ A ++LG ++ WV A + G + V+GSA
Sbjct: 242 EAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD--VLGSA 299
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LIDMY+KCGSI+ A ++F G+ +RNV ++S++I G AMHGRA + F DM + P+
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 288 GVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
VT+IG+L+ACSH GL + G+ P +HY CMVDLLGRAG LEE+ +++
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 336 EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
MP++P+ +W ALLGAC++H N E+ + A HL EL P G+Y+ LSNIYAS G W+
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479
Query: 396 DVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD 455
V++VR ++K ++K+PG SW+E D GVIHEF D +HP S +I L ++ L
Sbjct: 480 GVAKVRLMMKEMDVRKDPGCSWIELD-GVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILV 538
Query: 456 GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFM 515
GY+PN VL ++ +E+K+ L HSEK+A+AFGL++T P +RI KNLRICEDCH +
Sbjct: 539 GYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSI 598
Query: 516 CGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ R+I+VRD RFHHF +G CSC +YW
Sbjct: 599 KLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/557 (40%), Positives = 342/557 (61%), Gaps = 20/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + + L+ ++IR Y G + +++ Y SM G FT + K+ E+L
Sbjct: 127 VFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLS 186
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V +G+ +H IL G DLYV ++I +Y KCG + + KVFD M RDV SW L+
Sbjct: 187 VWMGKCVHG-LILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 245
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM--QYAGVETDY 185
Y +G +++A +F +P ++ V+WT M++GY Q+ ++A+ F+ M + +GV ++
Sbjct: 246 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ V+ ACAQL ++ + E+A G +N V AL MY+KCGS+ DA F
Sbjct: 306 VTIMSVLPACAQLSTLERGRQIHELACRMGLN--SNASVLIALTAMYAKCGSLVDARNCF 363
Query: 246 --VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH--- 300
+ ++N+ ++++MI +A +G A+ F +M++ +P+ +TF G+L+ CSH
Sbjct: 364 DKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGL 423
Query: 301 --VGLK-------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
VGLK Y ++P +HYAC+ DLLGRAG L EA K+V +MP+ +WG+LL
Sbjct: 424 VDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLL 483
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+ HRN E+A+ AA LF LEP+ GNY++LSN+YA AG W +V ++R ++K G KK
Sbjct: 484 AACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKK 543
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+PG SW+E + G H F GD +HP EI L L ++++A GY P+ VL+D+S+E
Sbjct: 544 SPGCSWIEIN-GKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEE 602
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ L+ HSEKLA+AFG+L T +R+ KNLRIC DCH M S++ GRE++VRD
Sbjct: 603 EKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDI 662
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 663 NRFHHFKGGCCSCGDYW 679
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 83/351 (23%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + + +F+ T + + LG Q+HA +LL G VG+ M+ Y
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAH-MLLRGLQPTALVGSKMVAFY----------- 115
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
A++GD++S+ +FN + + + +M+ Y +
Sbjct: 116 --------------------ASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERT 155
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG--SGFGPINNVVVGSA 227
+ + M G DY T V+ + +L + W+ + G G ++ V ++
Sbjct: 156 VATYFSMHSWGFTGDYFTFPFVLKSSVELLSV----WMGKCVHGLILRIGLQFDLYVATS 211
Query: 228 LIDMYSKCGSIDDAYR-------------------------------IFVGMKQRNVFSY 256
LI +Y KCG I+DA + IF M RN+ S+
Sbjct: 212 LIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSW 271
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTET--KPNGVTFIGVLTACSHVG----------LK 304
++MI G++ G A A+ LF +MVK ++ +PN VT + VL AC+ + L
Sbjct: 272 TTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELA 331
Query: 305 C-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV-EPNGGVWGALLGA 353
C G++ + + + + G L +A +K+ E N W ++ A
Sbjct: 332 CRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/560 (40%), Positives = 329/560 (58%), Gaps = 21/560 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSI----SLYCSMRREGIGPVSFTLSALFK 60
R +F+++ ++ W+A+I GY G+ K+SI L MRREG+ P T ++ +
Sbjct: 313 REIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILR 372
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT + G+QIHA+ +G F D + + MY KCG + + +VF +M ++VV
Sbjct: 373 ACTAHGALEQGRQIHAELSKVG-FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV 431
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+WT + Y GD+ SA +F+E+P ++ V+W M+ GY QN + E M+ G
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG 491
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT++ ++ AC L ++ V AE G ++ VV ++LI MYSKCG + +
Sbjct: 492 FQPDRVTVITILEACGALAGLERGKLVH--AEAVKLGLESDTVVATSLIGMYSKCGQVAE 549
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M R+ ++++M+ G+ HG A+ LF M+K PN +T V++ACS
Sbjct: 550 ARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSR 609
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + + ++P HY CMVDLLGRAG L+EA + ++ MP EP+ VW
Sbjct: 610 AGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWH 669
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+ H N ++A+ AA+H+ ELEP YI LSNIYA AG WDD ++VRR++ G
Sbjct: 670 ALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRG 729
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK+ G S +E D G IH F A D HP I L L ++ GY P++R VL+DV
Sbjct: 730 LKKDRGESSIEID-GRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDV 788
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
D +K++ L HSEKLA+A+GLL T G +RIMKNLR+C DCH S++ REIV
Sbjct: 789 DDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVA 848
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFH+F +G CSCG++W
Sbjct: 849 RDANRFHYFNNGTCSCGDFW 868
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 195/435 (44%), Gaps = 39/435 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ +N WTA+I+ L ++ LY M + GI P + T +L +C
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G++IH+ I G +D+ V N +I MY KC + +R++FD M +RDV+SW+ +I
Sbjct: 274 LNRGRRIHSH-ISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 128 AYANNG--DMESAGGLFNELP-------LKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
YA +G D ES +F L +KV + +++ + + + +
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI--NNVVVGSALIDMYSKCG 236
G E D + + A+ G I A V F + NVV ++ + MY KCG
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQV--------FSKMANKNVVAWTSFLSMYIKCG 444
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ A ++F M RNV S++ MI G+A +G +L M +P+ VT I +L
Sbjct: 445 DLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILE 504
Query: 297 ACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC H G+ T ++ + + G + EA + +KM +
Sbjct: 505 ACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTV 563
Query: 346 VWGALLGACQIHRNP-EIAQIAANHLFE-LEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
W A+L H + E + L E + P++I ++S + AG+ + + R+
Sbjct: 564 AWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISAC-SRAGLVQEGREIFRM 622
Query: 404 L----KMTGLKKNPG 414
+ KMT K++ G
Sbjct: 623 MQEDFKMTPRKQHYG 637
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 55/363 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ W+++I Y H + + M I P T ++ KAC
Sbjct: 113 VFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSI 172
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G++IH TI+ G +D+ V +I MY KCG + + +VF +M ER+VVSWT +I
Sbjct: 173 LEKGRKIH--TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAII 230
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A A Q+ K EA E +E+M AG+ + V
Sbjct: 231 QANA-------------------------------QHRKLNEAFELYEQMLQAGISPNAV 259
Query: 187 TLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V ++++C + + I+E G +++V +ALI MY KC S+ +A IF
Sbjct: 260 TFVSLLNSCNTPEALNRGRRIHSHISER---GLETDMIVANALITMYCKCNSVQEAREIF 316
Query: 246 VGMKQRNVFSYSSMILGFAMHG-----RAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
M +R+V S+S+MI G+A G QL M + PN VTF+ +L AC+
Sbjct: 317 DRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTA 376
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
H L G + ++ + G + EA ++ KM N W +
Sbjct: 377 HGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM-ANKNVVAWTS 435
Query: 350 LLG 352
L
Sbjct: 436 FLS 438
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 34/269 (12%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G L+++I L +++ G+ S T + + C + G+ +H Q LG D+Y+
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELG-VEIDIYL 93
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
GN++I Y K + + +VF M RDVV+W+ +I AYA N
Sbjct: 94 GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNN----------------- 136
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
P +A + FERM A +E + +T + ++ AC +++ + I
Sbjct: 137 --------------HPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTI 182
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ G +V V +ALI MYSKCG I A +F M +RNV S++++I A H + +
Sbjct: 183 VKAMGME--TDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A +L+ M++ PN VTF+ +L +C+
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
REAI+ ++ G+ + T VI CA+ + V + + G ++ +G+
Sbjct: 38 REAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHK--QLDELGVEIDIYLGN 95
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+LI+ YSK + A ++F M R+V ++SSMI +A + A F M +P
Sbjct: 96 SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155
Query: 287 NGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
N +TF+ +L AC+ H +K G+ ++ + + G + A ++
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVF 215
Query: 336 EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG-----NYIILSNIYAS 390
KM E N W A++ A HR N FEL + N + ++ S
Sbjct: 216 HKM-TERNVVSWTAIIQANAQHRK-------LNEAFELYEQMLQAGISPNAVTFVSLLNS 267
Query: 391 AGMWDDVSRVRRL 403
+ ++R RR+
Sbjct: 268 CNTPEALNRGRRI 280
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 337/553 (60%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN WTA I GY+ G +++I ++ + G+ P SF+L + AC D
Sbjct: 165 VFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGD 224
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I + I G +++V ++ Y KCG
Sbjct: 225 LRSGEWID-EYITENGMVRNVFVATALVDFYGKCG------------------------- 258
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ME A +F+ + K+ V+W++M+ GY N P+EA++ F +M G++ D
Sbjct: 259 ------NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYA 312
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VGV+ +CA+LG ++ +W + G+ F ++N V+G+ALIDMY+KCG +D A+ +F G
Sbjct: 313 MVGVLCSCARLGALELGDWASNLINGNEF--LDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M++++ +++ I G AM G A+ LFG M K+ KP+ TF+G+L AC+H GL
Sbjct: 371 MRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEG 430
Query: 304 -------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+C + ++P +HY CMVDLLGRAGCL+EA ++++ MP+E N VWGALLG C+
Sbjct: 431 RRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+HR+ ++ ++ L LEP GNY++LSNIYA++ W++ +++R ++ G+KK PGY
Sbjct: 491 LHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGY 550
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D GV+H+F GD +HP S +I LG+L L+A GY P VL+D+ +EEK+
Sbjct: 551 SWIEVD-GVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEH 609
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+ HSEKLA+AFGL++T+P + ++KNLR+C DCH + S++ GREI+VRDN RFH
Sbjct: 610 FIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFH 669
Query: 536 HFQDGKCSCGNYW 548
F DG CSC +YW
Sbjct: 670 CFTDGLCSCKDYW 682
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 163/295 (55%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ +Q K N FL+ +IRG +L ++SI +Y SMR+EG+ P SFT + KAC VLD
Sbjct: 64 ILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLD 123
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG ++H+ ++ G +D +V ++I +Y KCGF+ + KV
Sbjct: 124 SELGVKMHS-LVVKAGCEADAFVKISLINLYTKCGFIDNAFKV----------------- 165
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F+++P K+ +WTA ++GYV K REAI+ F R+ G+ D +
Sbjct: 166 --------------FDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFS 211
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV V+SAC + G ++ W+ E +G + NV V +AL+D Y KCG+++ A +F G
Sbjct: 212 LVEVLSACKRTGDLRSGEWIDEYITENGM--VRNVFVATALVDFYGKCGNMERARSVFDG 269
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M ++N+ S+SSMI G+A +G A+ LF M+ KP+ +GVL +C+ +G
Sbjct: 270 MLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLG 324
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + KN W+++I+GY G K+++ L+ M EG+ P + + + +C +
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARL 323
Query: 66 LDVSLGQQIHAQTILLGG-FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG A ++ G F + +G +I MY KCG + + +VF M ++D V W
Sbjct: 324 GALELGDW--ASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNA 381
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
I A +G ++ A GLF + M+ +G++ D
Sbjct: 382 AISGLAMSGHVKDALGLFGQ-------------------------------MEKSGIKPD 410
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T VG++ AC G+++ E F + ++D+ + G +D+A+++
Sbjct: 411 RNTFVGLLCACTHAGLVEEGRRYFNSME-CVFTLTPEIEHYGCMVDLLGRAGCLDEAHQL 469
Query: 245 FVGMK-QRNVFSYSSMILGFAMH 266
M + N + +++ G +H
Sbjct: 470 IKSMPMEANAIVWGALLGGCRLH 492
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G+ + ++RI K+ N+F +++MI G ++ +I+++ M K P+ TF VL
Sbjct: 56 GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 296 TACSHV-----GLKCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC+ V G+K + G +++L + G ++ A K+ + +P + N
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNF 174
Query: 345 GVWGALL 351
W A +
Sbjct: 175 ASWTATI 181
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 348/591 (58%), Gaps = 52/591 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+++ +++ + I G+ ++S+ L+ M+REG P +T+ ++ A ++
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL 168
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD+ G+QIH +I++ F ++++ N + MY KCG + +R +FD + ++++VSW +
Sbjct: 169 LDLRYGKQIHG-SIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLM 227
Query: 126 IVAYANNGDMESAGGL-----------------------------------FNELPLKDK 150
I YA NG E GL F+E KD
Sbjct: 228 ISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
V WTAM+ GY +N + +A+ F M +E D TL V+S+CA+L + + V
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ +G NN++V SALIDMYSKCG IDDA +F M RNV S+++MI+G A +G
Sbjct: 348 SILAGLN--NNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACM 318
A++LF +M++ + KP+ VTFIG+L+AC H +G++P+ DHYACM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACM 465
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
V+LLGR G +E+A+ +++ M +P+ +W LL C + A++AA HLFEL+P
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
YI+LSN+YAS G W DV+ VR L+K +KK G+SW+E D V H F + D THP S
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEV-HRFTSEDRTHPES 584
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG-A 497
+I + L L+ +LQ +G+ PN VL+DV ++EK + + HSEKLALAFGL+ G +
Sbjct: 585 EDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGIS 644
Query: 498 TVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KN+RIC DCH FM AS++IGR+I++RD+ RFHHF GKCSC + W
Sbjct: 645 PIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 191/391 (48%), Gaps = 33/391 (8%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
L+ S+ L CS R ++T L T ++ + Q H + L +D ++ N
Sbjct: 7 LRQSVDLLCS--RSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQ--PTDSFLHN 62
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
++ +Y K G L ++ +FD+M +RD SW L+ AYA +G +++ F+ +P +D V+
Sbjct: 63 QLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVS 122
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
+ + G+ N+ P+E++E F+RMQ G E T+V +++A AQL ++Y +
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII 182
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
F + NV + +AL DMY+KCG I+ A +F + ++N+ S++ MI G+A +G+
Sbjct: 183 VRNF--LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG-----LKCYGVSPSTDHYACMVDLLGRA-- 325
I L M + P+ VT ++ A G + + D ++G A
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300
Query: 326 GCLEEALKMVEKM---PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK----- 377
G E+AL + +M +EP+ +++ +C A++A+ H + K
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSC--------AKLASLHHGQAVHGKSILAG 352
Query: 378 IGNYIILS----NIYASAGMWDDVSRVRRLL 404
+ N +++S ++Y+ G DD V L+
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 336/559 (60%), Gaps = 18/559 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ RLVF+++ ++ W+ +IR ++ L M + P + ++
Sbjct: 177 YARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFA 236
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNT--MIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ ++ +G+ +HA ++ + V T ++ MY KCG LG +R++F+ + ++ VVS
Sbjct: 237 DTANMRMGKAMHAY-VIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
WT +I + +E A LF+ +D + WTAM++ Y Q +A F++M+ +GV
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT+V ++S CA G + WV + + ++ +AL+DMY+KCG I+ A
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV--DCILNTALVDMYAKCGDINAA 413
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F+ R++ ++++I GFAMHG A+ +F +M + KPN +TFIG+L ACSH
Sbjct: 414 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 473
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL +G+ P +HY CMVDLLGRAG L+EA +M++ MP++PN VWGA
Sbjct: 474 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 533
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
L+ AC++H+NP++ ++AA L E+EP+ G +++SNIYA+A W D + VR+ +K G+
Sbjct: 534 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 593
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG+S +E + G +HEF GD +HP I + L ++ +L GY P+ +VL ++
Sbjct: 594 KKEPGHSVIEVN-GTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 652
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEKLA+AFGL++T+P +RI+KNLR+C DCH S++ GR I+VR
Sbjct: 653 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 712
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF++G CSCG+YW
Sbjct: 713 DRNRFHHFREGYCSCGDYW 731
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 142 FNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
N+ P L W ++T Y + +PR A+ + +++ E D V+ AC Q+
Sbjct: 79 LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQV- 137
Query: 200 VIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
+W E GF G +V VG+AL+ MY +C ++ A +F M +R+V S
Sbjct: 138 -----SWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVS 192
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL-----TACSHVG--LKCYGV 308
+S+MI + + A++L +M + +P+ V + ++ TA +G + Y +
Sbjct: 193 WSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVI 252
Query: 309 SPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
S + + ++D+ + G L A ++ + + W A++ C
Sbjct: 253 RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGC 303
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/556 (40%), Positives = 345/556 (62%), Gaps = 17/556 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F++ N L A+ Y+ QG ++++ ++ M G+ P ++ + +C+++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ H +L GF S + N +I MY+KC + ++FD M + VV+W +
Sbjct: 351 RNILWGKSCHGY-VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
+ Y NG++++A F +P K+ V+W +++G VQ + EAIE F MQ GV D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT++ + SAC LG + A W+ E +G +V +G+ L+DM+S+CG + A I
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL--DVRLGTTLVDMFSRCGDPESAMSI 527
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + R+V ++++ I AM G A AI+LF DM++ KP+GV F+G LTACSH GL
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +GVSP HY CMVDLLGRAG LEEA++++E MP+EPN +W +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++ N E+A AA + L P++ G+Y++LSN+YASAG W+D+++VR +K GL+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG S ++ RG HEF +GD +HP I+ L ++ R G+ P+L +VL DV ++E
Sbjct: 708 PGTSSIQ-IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKE 766
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K +L HSEKLA+A+GL++++ G T+RI+KNLR+C DCH F AS+V REI++RDN
Sbjct: 767 KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNN 826
Query: 533 RFHHFQDGKCSCGNYW 548
RFH+ + GKCSCG++W
Sbjct: 827 RFHYIRQGKCSCGDFW 842
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 41/312 (13%)
Query: 3 SFPRLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
SF + VFE + Y F++ +LIRGY G ++I L+ M GI P +T A
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + G QIH + +G + DL+V N+++ Y +CG
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMG-YAKDLFVQNSLVHFYAECG------------------- 183
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAG 180
+++SA +F+E+ ++ V+WT+M+ GY + ++A++ F RM +
Sbjct: 184 ------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + VT+V VISACA+L ++ V SG +N+++V SAL+DMY KC +ID
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI-EVNDLMV-SALVDMYMKCNAIDV 289
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F N+ ++M + G A+ +F M+ + +P+ ++ + +++CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 301 V-----GLKCYG 307
+ G C+G
Sbjct: 350 LRNILWGKSCHG 361
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 36/255 (14%)
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMES---AGGLF-NELPLKDKVAWTAMVTGYVQN 163
R + + + DV + T+L+ G ES A +F N + +++ GY +
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF------- 216
EAI F RM +G+ D T +SACA+ A+G+G
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-----------SRAKGNGIQIHGLIV 161
Query: 217 --GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G ++ V ++L+ Y++CG +D A ++F M +RNV S++SMI G+A A A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 275 LFGDMVK-TETKPNGVTFIGVLTACSHV-----GLKCY------GVSPSTDHYACMVDLL 322
LF MV+ E PN VT + V++AC+ + G K Y G+ + + +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 323 GRAGCLEEALKMVEK 337
+ ++ A ++ ++
Sbjct: 282 MKCNAIDVAKRLFDE 296
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/552 (38%), Positives = 341/552 (61%), Gaps = 17/552 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFK 60
++ R +F+ W ++ GY ++S L+ M + E + P S TL +
Sbjct: 188 NYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLS 247
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC+++ D+ G+ I+ + I G +L + N +I M+ CG + +R VFDEM RDV+
Sbjct: 248 ACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVI 307
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT ++ +AN ++ A F+++P +D V+WTAM+ GY++ + +E + F MQ +
Sbjct: 308 SWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSN 367
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ D T+V +++ACA LG ++ W + + N+ +G+ALIDMY KCG+++
Sbjct: 368 VKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK--NDTFIGNALIDMYFKCGNVEK 425
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +IF M++++ F++++MI+G A +G A+ +F M++ P+ +T+IGV+ AC+H
Sbjct: 426 AKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTH 485
Query: 301 VGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
VGL +G+ P+ HY CMVDLLGRAG L+EAL+++ MPV+PN VWG
Sbjct: 486 VGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWG 545
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LLGAC++H+N ++A++AAN + ELEP+ Y++L NIYA+ W ++ VR+++ G
Sbjct: 546 SLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERG 605
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+KK PG S +E + G+++EF AGD +HP S EI L ++ L GY P+ V DV
Sbjct: 606 IKKIPGCSLMEMN-GIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDV 664
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+E+K+ L HSEKLA+A+ L+++ G T+RI+KNLR+C DCH S+V RE++V
Sbjct: 665 GEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIV 724
Query: 529 RDNMRFHHFQDG 540
RD RFHHF+ G
Sbjct: 725 RDKTRFHHFRHG 736
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 87/425 (20%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF+++ + F+W +I+GY + +SLY M I P FT L K T
Sbjct: 87 YARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFT 146
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + + G+ + ++ G S+L+V I ++ CG + +RK+FD +VV+W
Sbjct: 147 KDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWN 206
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ Y E + LF E+ K + V
Sbjct: 207 VVLSGYNRFKRYEESKRLFIEMEKKCEC-----------------------------VSP 237
Query: 184 DYVTLVGVISACAQL-----GVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ VTLV ++SAC++L G Y ++ E I E N+++ +ALIDM++ CG
Sbjct: 238 NSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEP-------NLILENALIDMFASCGE 290
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA------------------------- 272
+D A +F MK R+V S++S++ GFA R A
Sbjct: 291 MDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRM 350
Query: 273 ------IQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST---------DHYA- 316
+ LF DM + KP+ T + +LTAC+H+G G T D +
Sbjct: 351 NRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIG 410
Query: 317 -CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--L 373
++D+ + G +E+A K+ +M + + W A++ + + E A +++ E +
Sbjct: 411 NALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASV 469
Query: 374 EPDKI 378
PD+I
Sbjct: 470 TPDEI 474
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 52/320 (16%)
Query: 36 SISLYCSMRREGIGPVSFTLS--ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
S+SL+ SF S +L + C + +++ QIH+QTI G ++ L++
Sbjct: 17 SLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN---QIHSQTIKTGLSSNHLFLTKV 73
Query: 94 MIGMYVK-CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+I K G + +RKVFDE+P+ V W +I Y+ ES L+ +
Sbjct: 74 IIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLM------- 126
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
V N KP D T ++ + +KY + A
Sbjct: 127 -------LVHNIKP-----------------DGFTFPFLLKGFTKDMALKYGKVLLNHAV 162
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
GF +N+ V I ++S CG ++ A +IF V +++ ++ G+ R +
Sbjct: 163 IHGFLD-SNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEES 221
Query: 273 IQLFGDMVKT--ETKPNGVTFIGVLTACSH----VGLKC-YG-------VSPSTDHYACM 318
+LF +M K PN VT + +L+ACS VG KC Y V P+ +
Sbjct: 222 KRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENAL 281
Query: 319 VDLLGRAGCLEEALKMVEKM 338
+D+ G ++ A + ++M
Sbjct: 282 IDMFASCGEMDAARGVFDEM 301
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 343/569 (60%), Gaps = 29/569 (5%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F++++ ++ W +I+ Y+ D I L+ + E + P +FTL + K C
Sbjct: 68 YARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCA 126
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV--- 120
+ V G+QIH + +G F SD++V +++ MY KCG + C+RKVFD M ++DVV
Sbjct: 127 RLGVVQEGKQIHGLALKIG-FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWN 185
Query: 121 --------SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
SW +I Y +GD +SA LF ++P+ D V W M+ GY N + +A++
Sbjct: 186 SLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKM 245
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M G + TLV V+SA + L V+ W+ E +GF + ++G++LI+MY
Sbjct: 246 FFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFEL--DGILGTSLIEMY 303
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG I+ A +F ++++ V ++++I+G +HG A+ A+ LF +M KT KPN + FI
Sbjct: 304 AKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFI 363
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL AC+H GL Y + P+ +HY C+VD+L RAG LEEA +E MP+
Sbjct: 364 GVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPI 423
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
PN +W +LLG + H +I + AA + E+ P+ IG YI+LSN+YA++GMW+ VS V
Sbjct: 424 SPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHV 483
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R ++ G +K+PG S +E +G +HEF GD++HP + EI + ++ ++L+ G+ P+
Sbjct: 484 REMMYKRGFRKDPGCSSVE-HKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 542
Query: 461 LRSVLYDVSDE-EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
VL + E EK+ L HSE+LA+AFGL+ PG +RIMKNLR+C DCH S
Sbjct: 543 TTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLS 602
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ REI+VRDN RFHHF++G CSC +YW
Sbjct: 603 KIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 166/406 (40%), Gaps = 102/406 (25%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYV--KCGFLGCS 107
P + LS LF+ C+ +V +Q+HA ++ F +V + ++ +Y K LG +
Sbjct: 15 PHNLHLS-LFQTCSAPQEV---EQLHAFSLKTAIFNHP-FVSSRLLALYSDPKINDLGYA 69
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
R +FD + R ++ W +I Y N LF+EL
Sbjct: 70 RSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL---------------------- 107
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EY D TL VI CA+LGV++ + +A GFG ++V V +
Sbjct: 108 -VHEYL---------PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG--SDVFVQGS 155
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS----------------------------- 258
L++MYSKCG ID A ++F GM ++V ++S
Sbjct: 156 LVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELF 215
Query: 259 -------------MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
MI G+ ++G+ A+++F M+K ++P+ T + VL+A S GL
Sbjct: 216 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS--GLAV 273
Query: 306 YGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G Y ++++ + GC+E AL + + + G W A++
Sbjct: 274 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIV 332
Query: 353 ACQIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
IH N +A L+P+ I +I + N AG+ DD
Sbjct: 333 GLGIHGMANHALALFLEMCKTGLKPNAI-IFIGVLNACNHAGLVDD 377
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/560 (40%), Positives = 339/560 (60%), Gaps = 27/560 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + N FLWT +I + ++S Y M I P +FTLS+L KACT
Sbjct: 77 LFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT---- 132
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + +H+ I G +S LYV ++ Y + G + ++K+FD MPER +VS+T ++
Sbjct: 133 LHPARAVHSHAIKFG-LSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLT 191
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-------G 180
YA +G + A LF + +KD V W M+ GY Q+ P EA+ +F +M
Sbjct: 192 CYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGK 251
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + +T+V V+S+C Q+G ++ WV E +G NV VG+AL+DMY KCGS++D
Sbjct: 252 VRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKV--NVRVGTALVDMYCKCGSLED 309
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F M+ ++V +++SMI+G+ +HG + A+QLF +M KP+ +TF+ VLTAC+H
Sbjct: 310 ARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAH 369
Query: 301 VGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL YG+ P +HY CMV+LLGRAG ++EA +V M VEP+ +WG
Sbjct: 370 AGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWG 429
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LL AC+IH N + + A L G Y++LSN+YA+A W V++VR ++K +G
Sbjct: 430 TLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSG 489
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
++K PG S +E + +HEF AGD HP S +I L + L+ Y P +VL+D+
Sbjct: 490 VEKEPGCSSIE-VKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDI 548
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
++EK++ L HSEKLALAFGL++TSPGA ++I+KNLR+C DCH M S++ GR+I++
Sbjct: 549 GEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIM 608
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSC +YW
Sbjct: 609 RDRNRFHHFENGSCSCRDYW 628
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 40/251 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLY-------CSMRREGIGPVSFTLSAL 58
R++FE + K+ W +I GY G +++ + + P T+ A+
Sbjct: 203 RVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAV 262
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+C +V + G+ +H+ + G ++ VG ++ MY KCG L +RKVFD M +D
Sbjct: 263 LSSCGQVGALECGKWVHSY-VENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKD 321
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VV+W +I+ Y +G F++ EA++ F M
Sbjct: 322 VVAWNSMIMGYGIHG--------FSD-----------------------EALQLFHEMCC 350
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
GV+ +T V V++ACA G++ W + G+G V ++++ + G +
Sbjct: 351 IGVKPSDITFVAVLTACAHAGLVS-KGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRM 409
Query: 239 DDAYRIFVGMK 249
+AY + M+
Sbjct: 410 QEAYDLVRSME 420
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 55/264 (20%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L +YA+ G + + LF+ P + WT ++ + A+ Y+ +M ++
Sbjct: 60 KLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQP 119
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL ++ AC + A V + FG +++ V + L+D Y++ G + A +
Sbjct: 120 NAFTLSSLLKAC----TLHPARAV--HSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQK 173
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM------------------------ 279
+F M +R++ SY++M+ +A HG A LF M
Sbjct: 174 LFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEA 233
Query: 280 --------------VKTETKPNGVTFIGVLTACSHVG-LKC----------YGVSPSTDH 314
+ +PN +T + VL++C VG L+C G+ +
Sbjct: 234 LVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRV 293
Query: 315 YACMVDLLGRAGCLEEALKMVEKM 338
+VD+ + G LE+A K+ + M
Sbjct: 294 GTALVDMYCKCGSLEDARKVFDVM 317
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+ G + + +F NVF ++ +I A H A+ + M+ +PN T
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 292 IGVLTACS-------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+L AC+ H +G+S +VD R G + A K+ + MP
Sbjct: 125 SSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMP 179
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/557 (39%), Positives = 344/557 (61%), Gaps = 22/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ W A+I + L G ++ L+ M + + P T+ ++ AC + +D
Sbjct: 230 VFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKID 289
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I I GFT L + N M+ MYVKCG + ++ +F++M E+D+VSWT ++
Sbjct: 290 LEFGRWI-CSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLD 348
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYV 186
+A G+ + A +F+ +P K AW A+++ Y QN KPR A+ F MQ + + D V
Sbjct: 349 GHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEV 408
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIF 245
TL+ + A AQLG I + +W+ + IN N + ++L+DMY+KCG+++ A +F
Sbjct: 409 TLICALCASAQLGAIDFGHWIHVYIKKHD---INLNCHLATSLLDMYAKCGNLNKAMEVF 465
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+++++V+ +S+MI AM+G+ AA+ LF M++ KPN VTF +L AC+H GL
Sbjct: 466 HAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVN 525
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ P HY C+VD+ GRAG LE+A +EKMP+ P VWGALLGA
Sbjct: 526 EGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGA 585
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C H N E+A++A +L ELEP G +++LSNIYA AG W+ VS +R+L++ + +KK P
Sbjct: 586 CSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEP 645
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
S ++ + G++HEF GD +HP S +I L ++ ++ + GY+P++ ++L +S+E+
Sbjct: 646 WCSSIDVN-GIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLL-QLSEEDN 703
Query: 474 --KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
++ L HSEKLA+AFGL++T+ +RI+KN+RIC DCH F SQ+ R+I++RD
Sbjct: 704 LMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDR 763
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+ GKCSC +YW
Sbjct: 764 YRFHHFRGGKCSCLDYW 780
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 85/397 (21%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
+ + VF Q+ N + W LIRGY S ++ M P FT LFKA
Sbjct: 124 YAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAA 183
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + LG +H I +SDL++ N++I Y
Sbjct: 184 SRLKVLHLGSVLHGMVIK-ASLSSDLFILNSLINFY------------------------ 218
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++G + A +F +P KD V+W AM+ + P +A+ F+ M+ V+
Sbjct: 219 -------GSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVK 271
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +T+V V+SACA+ +++ W+C E +GF ++++ +A++DMY KCG I+DA
Sbjct: 272 PNVITMVSVLSACAKKIDLEFGRWICSYIENNGF--TEHLILNNAMLDMYVKCGCINDAK 329
Query: 243 RIFVGMKQRNVFSYSSMILGFA-------------------------------MHGRAHA 271
+F M ++++ S+++M+ G A +G+
Sbjct: 330 DLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRV 389
Query: 272 AIQLFGDM-VKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
A+ LF +M + + KP+ VT I L A + HV +K + ++ + ++
Sbjct: 390 ALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLL 449
Query: 320 DLLGRAGCLEEALKM---VEKMPVEPNGGVWGALLGA 353
D+ + G L +A+++ VE+ V VW A++GA
Sbjct: 450 DMYAKCGNLNKAMEVFHAVERKDVY----VWSAMIGA 482
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
CTE + G ++ + IL F NTM + L SR D +
Sbjct: 58 CTEAVKGEKGNEVESTNIL--EFIDQ--CTNTMQLKQIHAHMLRTSRFC-------DPYT 106
Query: 122 WTELIVAYA--NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
++L+ AYA + + A +FN++P + W ++ GY ++ P ++ F M ++
Sbjct: 107 ASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHS 166
Query: 180 GVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
E + T + A ++L V+ + + + + +++ + ++LI+ Y G+
Sbjct: 167 CSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLS--SDLFILNSLINFYGSSGAP 224
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D A+R+F M ++V S+++MI FA+ G A+ LF +M + KPN +T + VL+AC
Sbjct: 225 DLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSAC 284
Query: 299 S-HVGLK-----CYGVSPS--TDHYA---CMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+ + L+ C + + T+H M+D+ + GC+ +A + KM E + W
Sbjct: 285 AKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMS-EKDIVSW 343
Query: 348 GALL 351
+L
Sbjct: 344 TTML 347
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 347/591 (58%), Gaps = 52/591 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+++ +++ + I G+ ++S+ L+ M+REG P +T+ ++ A ++
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL 168
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+QIH +I++ F ++++ N + MY KCG + +R +FD + ++++VSW +
Sbjct: 169 SDLRYGKQIHG-SIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLM 227
Query: 126 IVAYANNGDMESAGGL-----------------------------------FNELPLKDK 150
I YA NG E GL F+E KD
Sbjct: 228 ISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
V WTAM+ GY +N + +A+ F M +E D TL V+S+CA+L + + V
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ +G NN++V SALIDMYSKCG IDDA +F M RNV S+++MI+G A +G
Sbjct: 348 SILAGLN--NNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACM 318
A++LF +M++ + KP+ VTFIG+L+AC H +G++P+ DHYACM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACM 465
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
V+LLGR G +E+A+ +++ M +P+ +W LL C + A++AA HLFEL+P
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
YI+LSN+YAS G W DV+ VR L+K +KK G+SW+E D V H F + D THP S
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEV-HRFTSEDRTHPES 584
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG-A 497
+I + L L+ +LQ +G+ PN VL+DV ++EK + + HSEKLALAFGL+ G +
Sbjct: 585 EDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGIS 644
Query: 498 TVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KN+RIC DCH FM AS++IGR+I++RD+ RFHHF GKCSC + W
Sbjct: 645 PIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 33/391 (8%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
L+ S+ L CS R ++T L T ++ + Q H + L +D ++ N
Sbjct: 7 LRQSVDLLCS--RSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQ--PTDSFLHN 62
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
++ +Y K G L ++ +FD+M +RD+ SW L+ AYA +G +++ F+ +P +D V+
Sbjct: 63 QLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVS 122
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
+ + G+ N+ P+E++E F+RMQ G E T+V +++A AQL ++Y +
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII 182
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
F + NV + +AL DMY+KCG I+ A +F + ++N+ S++ MI G+A +G+
Sbjct: 183 VRNF--LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG-----LKCYGVSPSTDHYACMVDLLGRA-- 325
I L M + P+ VT ++ A G + + D ++G A
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300
Query: 326 GCLEEALKMVEKM---PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK----- 377
G E+AL + +M +EP+ +++ +C A++A+ H + K
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSC--------AKLASLHHGQAVHGKSILAG 352
Query: 378 IGNYIILS----NIYASAGMWDDVSRVRRLL 404
+ N +++S ++Y+ G DD V L+
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 327/560 (58%), Gaps = 21/560 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGH-----LKDSISLYCSMRREGIGPVSFTLSALFK 60
R F+++ ++ W+A+I GY G+ L + L MRREG+ P T ++ K
Sbjct: 335 RETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILK 394
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC+ + G+QIHA+ I GF SD + + MY KCG + + +VF +M ++VV
Sbjct: 395 ACSVHGALEQGRQIHAE-ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W L+ Y GD+ SA +F+E+ ++ V+W M+ GY Q+ + E M+ G
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEG 513
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT++ ++ AC L ++ V AE G ++ VV ++LI MYSKCG + +
Sbjct: 514 FQPDRVTIISILEACGALSALERGKLVH--AEAVKLGLESDTVVATSLIGMYSKCGEVTE 571
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F + R+ ++++M+ G+ HG A+ LF M+K PN +TF V++AC
Sbjct: 572 ARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGR 631
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + + + P HY CMVDLLGRAG L+EA + +++MP EP+ VW
Sbjct: 632 AGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWH 691
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+ H N ++A+ AA+H+ LEP Y+ LSNIYA AG WDD ++VR+++ G
Sbjct: 692 ALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKG 751
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK+ G S +E D G IH F A D HP I L L ++ GY P++R VL+DV
Sbjct: 752 LKKDRGESSIEID-GRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDV 810
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ +K+R L HSEKLA+A+GLL T PG +RIMKNLR+C DCH S++ REIV
Sbjct: 811 DEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVA 870
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFH+F++G CSCG++W
Sbjct: 871 RDANRFHYFKNGTCSCGDFW 890
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 188/428 (43%), Gaps = 30/428 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++K +N WTA+I+ L ++ LY M + GI P + T +L +C
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G++IH+ I G +D+ V N +I MY KC + +R+ FD M +RDV+SW+ +I
Sbjct: 296 LNRGRRIHSH-ISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 128 AYANNG--DMESAGGLFNELP-------LKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
YA +G D ES +F L +KV + +++ + + + +
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G E+D + + A+ G I A V E NVV ++L+ MY KCG +
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN------KNVVAWASLLTMYIKCGDL 468
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M RNV S++ MI G+A G +L M +P+ VT I +L AC
Sbjct: 469 TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEAC 528
Query: 299 S-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H G+ T ++ + + G + EA + +K+ + W
Sbjct: 529 GALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAW 587
Query: 348 GALLGACQIHR-NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
A+L H PE + L E P + + + AG+ + + R+++
Sbjct: 588 NAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQ- 646
Query: 407 TGLKKNPG 414
+ PG
Sbjct: 647 EDFRMKPG 654
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G LK++I L +++ G+ S T + + C ++ G+ +H Q LG D+Y+
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELG-LAIDIYL 115
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
GN++I Y K G D+ S +F + L+D
Sbjct: 116 GNSLINFYSKFG-------------------------------DVASVEQVFRRMTLRDV 144
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
V W++M+ Y N P +A + FERM+ A +E + +T + ++ AC +++ A + +
Sbjct: 145 VTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTV 204
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ SG +V V +ALI MYSKCG I A IF MK+RNV S++++I A H + +
Sbjct: 205 VKASGME--TDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLN 262
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
A +L+ M++ PN VTF+ +L +C+ H + G+ ++
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + C+++A + ++M + + W A++
Sbjct: 323 TMYCKCNCIQDARETFDRMS-KRDVISWSAMIA 354
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 154/361 (42%), Gaps = 53/361 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ W+++I Y H + + M+ I P T ++ KAC
Sbjct: 135 VFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSM 194
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ ++IH T++ GM E DV T LI
Sbjct: 195 LEKAREIH--TVVKAS------------GM------------------ETDVAVATALIT 222
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ G++ A +F ++ ++ V+WTA++ Q+ K EA E +E+M AG+ + VT
Sbjct: 223 MYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVT 282
Query: 188 LVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V ++++C + + I+E G +VVV +ALI MY KC I DA F
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISER---GLETDVVVANALITMYCKCNCIQDARETFD 339
Query: 247 GMKQRNVFSYSSMILGFAMHG-----RAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
M +R+V S+S+MI G+A G QL M + PN VTF+ +L ACS
Sbjct: 340 RMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVH 399
Query: 300 ---------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
H + G + ++ + G + EA ++ KM N W +L
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASL 458
Query: 351 L 351
L
Sbjct: 459 L 459
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/623 (36%), Positives = 344/623 (55%), Gaps = 86/623 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+ + + +IRG+ L+ ++I L+ M + P FT + K C+ +
Sbjct: 80 IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQA 139
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR------------------- 108
+S G+QIHA I+ GF S +V NT+I MY CG + +R
Sbjct: 140 LSEGEQIHA-LIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFA 198
Query: 109 ------------KVFDEMPERDVV----------------------SW------------ 122
K+F EM E D+ W
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKG 258
Query: 123 -----TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
T L+ YA G +++A LF+++ +D VAW+AM++GY Q ++ REA++ F MQ
Sbjct: 259 NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ 318
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
A ++ + +T+V ++S+CA LG ++ WV + V +G+AL+D Y+KCGS
Sbjct: 319 KANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKL--TVTLGTALMDFYAKCGS 376
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++ + +F M +NV S++ +I G A +G+ A++ F M++ +PN VTFIGVL+A
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH GL + +G+ P +HY CMVD+LGRAG +EEA + ++ MP++PN
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL +C++H+N EI + + L LEP G+YI+LSNIYAS G W+D +VR +K
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+KK PG S +E D GVIHEF A D H S EI A+ D++ ++++ GY PN
Sbjct: 557 EKGIKKTPGCSLIELD-GVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEAR 615
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D +++K+ + HSEKLA+AFGL+ + PG T+RI KNLR+C DCH S+V RE
Sbjct: 616 LDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNRE 675
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF++G CSC +YW
Sbjct: 676 IVVRDRTRFHHFKEGSCSCNDYW 698
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 20/290 (6%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
M+ A +F ++ D A+ M+ G+ P EAI F+ M V+ D T ++
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C++L + + + GFG ++ V + LI MY+ CG ++ A R+F M +RNV
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFG--SHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVR 191
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------L 303
+++SM G+ G ++LF +M++ + + + VT + VLTAC + +
Sbjct: 192 TWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYV 251
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEI 362
+ G+ + +VD+ + G ++ A ++ ++M + W A++ G Q R E
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISGYSQASRCREA 310
Query: 363 AQIAAN-HLFELEPDKIGNYIILSNIYA----SAGMWDDVSRVRRLLKMT 407
+ ++P++I ILS+ G W ++ +K+T
Sbjct: 311 LDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT 360
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 34/284 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q+ ++ W+A+I GY ++++ L+ M++ I P T+ ++ +C +
Sbjct: 280 RRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVL 339
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H I + +G ++ Y KCG + S +VF +MP ++V+SWT L
Sbjct: 340 GALETGKWVHF-FIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVL 398
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A+NG + ++A+EYF M VE +
Sbjct: 399 IQGLASNG-------------------------------QGKKALEYFYLMLEKNVEPND 427
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT +GV+SAC+ G++ + ++ FG + ++D+ + G I++A++
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLF-VSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M Q N + +++ +H + ++ E +G
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSG 530
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S+D A IF + + + +Y+ MI GF + H AI LF +M + +P+ TF +L
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 297 ACSHVG------------LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
CS + +KC +G +T ++ + G +E A ++ ++M
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNT-----LIHMYANCGEVEVARRVFDEMS- 186
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR- 399
E N W ++ N E + + EL D + + L ++ + G D+
Sbjct: 187 ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL--DIRFDEVTLVSVLTACGRLADLELG 244
Query: 400 --VRRLLKMTGLKKNP 413
+ R ++ GLK NP
Sbjct: 245 EWINRYVEEKGLKGNP 260
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 331/558 (59%), Gaps = 47/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +++F+++ KN WT LI GY QG + ++ L M++ + P T +++ + C
Sbjct: 249 SKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGC 308
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T L + G+++H + I+ G+ +++V N +I MY KCG L +RK
Sbjct: 309 TTPLALEHGKKVH-RYIIQSGYGREIWVVNALITMYCKCGGLKEARK------------- 354
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LF +LP +D V WTAMVTGY Q EAI+ F RMQ G++
Sbjct: 355 ------------------LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +T +++C+ ++ + + +G+ +V + SAL+ MY+KCGS+DDA
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL--DVYLQSALVSMYAKCGSMDDAR 454
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +RNV ++++MI G A HGR A++ F M K KP+ VTF VL+AC+HVG
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 303 LK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG+ P +HY+C VDLLGRAG LEEA ++ MP +P VWGAL
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+IH + E + AA ++ +L+PD G Y+ LSNIYA+AG ++D +VR++++ +
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E D G +H F D +HP + EI LG L ++++ GY P+ R VL+DV +
Sbjct: 635 KEPGQSWIEVD-GKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDE 693
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K + L +HSE+LA+ +GL+ T PG +RI+KNLR+C DCH S+V+GREI+ RD
Sbjct: 694 EQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARD 753
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF DG CSCG++W
Sbjct: 754 AHRFHHFVDGVCSCGDFW 771
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 38/272 (13%)
Query: 30 QGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLY 89
QG LK+++ + +M +G S L + C + + G+++HA IL G + Y
Sbjct: 74 QGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHA-AILKSGIQPNRY 132
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
+ NT++ MY KCG L +R+VFD + +R++
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNI------------------------------ 162
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-C 208
V+WTAM+ +V + EA + +E M+ AG + D VT V +++A +++ V
Sbjct: 163 -VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 209 EIAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG 267
EIA+ G P VG++L+ MY+KCG I A IF + ++NV +++ +I G+A G
Sbjct: 222 EIAKAGLELEP----RVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+ A++L M + E PN +T+ +L C+
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
D +A + V+ + + +EA+ M G G++ CA+L ++ V
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
SG P N + + L+ MY+KCGS+ DA R+F G++ RN+ S+++MI F +
Sbjct: 120 AAILKSGIQP--NRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQ 177
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCY------GVSPSTDHYAC 317
A + + M KP+ VTF+ +L A ++ VG K + G+
Sbjct: 178 NLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTS 237
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG--ACQIHRNPEIAQIAANHLFELEP 375
+V + + G + +A + +K+P E N W L+ A Q + + + E+ P
Sbjct: 238 LVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAP 296
Query: 376 DKIGNYIILS 385
+KI IL
Sbjct: 297 NKITYTSILQ 306
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 328/553 (59%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ K+ W+ALI GY G ++++ ++ M G+ + ++ AC +
Sbjct: 260 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 319
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+ IH I +G S + + N +I MY G + ++K+F+ D +SW +I
Sbjct: 320 VKTGKMIHGLVIRMG-IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMIS 378
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G +E A LF+ +P KD V+W+A+++GY Q+ E + F MQ + D
Sbjct: 379 GCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETI 438
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VISAC L + WV +G NV++G+ L+DMY KCG +++A +F G
Sbjct: 439 LVSVISACTHLAALDQGKWVHAYIRKNGLKV--NVILGTTLLDMYMKCGCVENALEVFNG 496
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++ V S++++I+G A++G ++ +F +M PN +TF+GVL AC H+GL
Sbjct: 497 MEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG 556
Query: 304 KCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+C+ G+ P+ HY CMVDLLGRAG L EA K++E MP+ P+ WGALLGAC+
Sbjct: 557 RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACK 616
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H + E+ + L EL+PD G +++LSNI+AS G W+DV VR ++K G+ K PG
Sbjct: 617 KHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGC 676
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + GV+HEF AGD THP +++ L ++ RL+ +GY P+ V D+ +EEK+
Sbjct: 677 SLIEAN-GVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKET 735
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGLLT SP +RIMKNLRIC DCH S+ REIVVRD RFH
Sbjct: 736 TLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFH 795
Query: 536 HFQDGKCSCGNYW 548
+F++G CSC +YW
Sbjct: 796 YFKEGACSCMDYW 808
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 195/417 (46%), Gaps = 77/417 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++++ N F+W ++R YI + ++ LY M + +GP ++T + +AC L
Sbjct: 97 IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE-------------- 113
G++IH +L GF SD+YV NT+I MY CG + +RK+FDE
Sbjct: 157 EFGGKEIHDH-VLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215
Query: 114 -----------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
MP+R++V+ +IV G + A LFNE+ KD V+W+A+
Sbjct: 216 GYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSAL 275
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
++GY QN EA+ F M G+ D V +V V+SACA L ++K + + G
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI 335
Query: 217 GPINNVVVGSALIDMYS-------------------------------KCGSIDDAYRIF 245
N + +ALI MYS KCGS++ A +F
Sbjct: 336 ESYVN--LQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALF 393
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M ++++ S+S++I G+A H + LF +M + +P+ + V++AC+H+
Sbjct: 394 DVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALD 453
Query: 303 --------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ G+ + ++D+ + GC+E AL++ M E W AL+
Sbjct: 454 QGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALI 509
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 40/266 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W+A+I GY ++++L+ M+ I P L ++ ACT +
Sbjct: 390 RALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHL 449
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +HA I G ++ +G T++ MY+KCG + + +VF+ M E+ V SW L
Sbjct: 450 AALDQGKWVHAY-IRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNAL 508
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ A NG +E + +F+E M+ GV +
Sbjct: 509 IIGLAVNGLVERSLDMFSE-------------------------------MKNNGVIPNE 537
Query: 186 VTLVGVISACAQLGVIKYANWVCEIA---EGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+T +GV+ AC +G++ C A E G P NV ++D+ + G +++A
Sbjct: 538 ITFMGVLGACRHMGLVDEGR--CHFASMIEKHGIEP--NVKHYGCMVDLLGRAGLLNEAE 593
Query: 243 RIFVGMKQR-NVFSYSSMILGFAMHG 267
++ M +V ++ +++ HG
Sbjct: 594 KLIESMPMAPDVATWGALLGACKKHG 619
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/550 (41%), Positives = 327/550 (59%), Gaps = 20/550 (3%)
Query: 15 KNPFLWT--ALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTEVLDVSL 70
+NP L+T ++IR + S Y + + P ++T + L + ++L
Sbjct: 70 QNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGT 129
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G +H + G F D +V + +I MY + G L +VF + E D+V T ++ A A
Sbjct: 130 GSSVHGAAVKYG-FEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACA 188
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
GD+ A LF+++ KD +AW AM++GYVQ + REA+ F MQ GV+ + V++V
Sbjct: 189 KMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVS 248
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+SAC+ LG + W E + + +G+ALIDMY+KCG+++ A +F GMK+
Sbjct: 249 VLSACSHLGALDQGRWAHAYIERNKLRM--TLTLGTALIDMYAKCGNMNKAMEVFWGMKE 306
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
+NV+++SS I G AM+G ++LF M + +PN +TF+ VL CS VGL
Sbjct: 307 KNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKH 366
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
K YG+ P +HY CMVDL GRAG L+EAL + MPV P+ G WGALL AC+I+R
Sbjct: 367 FESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYR 426
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N E+ ++A+ + ELE G Y++LSNIYA + WD VS VR+ + + G++K PG S +
Sbjct: 427 NMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVI 486
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E G +HEF GD +HP EIQ LG++ RL+ GY N V +D+ +EEK+ L
Sbjct: 487 EVG-GEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALC 545
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEK+A+AFGL++ SP +RI+KNLR+C DCH S+ REIVVRD RFHHF+
Sbjct: 546 MHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFR 605
Query: 539 DGKCSCGNYW 548
DG+CSC YW
Sbjct: 606 DGECSCKGYW 615
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F+++ +K+P W A+I GY+ G ++++SL+ M+REG+ ++ ++ AC+
Sbjct: 195 FARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACS 254
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ HA I L +G +I MY KCG + + +VF M E++V +W+
Sbjct: 255 HLGALDQGRWAHAY-IERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWS 313
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
I A NG E + +E F M+ V+
Sbjct: 314 SAIGGLAMNGAGE-------------------------------KCLELFSLMKQDSVQP 342
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +T V V+ C+ +G+++ E +++ G P + ++D+Y + G +D+A
Sbjct: 343 NEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEP--RLEHYGCMVDLYGRAGHLDEAL 400
Query: 243 RIFVGMKQR 251
M R
Sbjct: 401 NFINSMPVR 409
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 329/555 (59%), Gaps = 46/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE++ ++ W A+I GY G +++++ + M+R + P T+ + AC +
Sbjct: 218 RRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQS 277
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG + + I G S+L + N +I MY KCG
Sbjct: 278 GSLELGNWVRSW-IEDHGLGSNLRLVNALIDMYSKCG----------------------- 313
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D++ A LF + KD ++W M+ GY +EA+ F +MQ + VE +
Sbjct: 314 --------DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPND 365
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V ++ ACA LG + W+ + G + N + ++LIDMY+KCG+I+ A ++F
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLG-LTNTSLWTSLIDMYAKCGNIEAAKQVF 424
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
GMK +++ S+++MI G AMHG A+ A++LF M +P+ +TF+GVL+ACSH GL
Sbjct: 425 AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVE 484
Query: 304 ---KC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+C Y +SP HY CM+DLLGRAG +EA +++ M ++P+G +WG+LLGA
Sbjct: 485 LGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA 544
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N E+ + AA HLFELEP+ G Y++LSNIYA+AG WDDV+R+R L G+KK P
Sbjct: 545 CRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVP 604
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D V+HEF GD H S +I + L ++ L+ G+ P+ VLYD+ +E K
Sbjct: 605 GCSSIEVD-SVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWK 663
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AFGL++T P T+RI+KNLR+C +CH + S++ REI+ RD R
Sbjct: 664 EGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNR 723
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 724 FHHFKDGSCSCMDYW 738
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 216/399 (54%), Gaps = 22/399 (5%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ L+FE ++ N F+W +IRG L +I Y M G+ P S+T L K+C
Sbjct: 83 SYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSC 142
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+V G+QIH + LG SD +V ++I MY + G LG + VF + RD VS+
Sbjct: 143 AKVGATQEGKQIHGHVLKLG-LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI Y G ++ A LF E+P++D V+W AM+ GY Q+ + EA+ +F+ M+ A V
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T+V V+SACAQ G ++ NWV E G G +N+ + +ALIDMYSKCG +D A
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLG--SNLRLVNALIDMYSKCGDLDKAR 319
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F G+ ++++ S++ MI G++ A+ LF M ++ +PN VTF+ +L AC+++G
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 303 L-------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-GVWG 348
K G++ +T + ++D+ + G +E A ++ M +P G W
Sbjct: 380 ALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGNIEAAKQVFAGM--KPKSLGSWN 436
Query: 349 ALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILS 385
A++ +H + +A + + EPD I +LS
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 116/260 (44%), Gaps = 41/260 (15%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G++ A LF + ++ W M+ G ++ P AI+++ RM GVE + T ++
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 193 SACAQLGVIK--------------------YANWVCEIAEGSGFG---------PINNVV 223
+CA++G + + + + A+ G + + V
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ALI Y+ G +DDA R+F + R+ S+++MI G+A GR A+ F +M +
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 284 TKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
PN T + VL+AC+ G ++ +G+ + ++D+ + G L++A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 333 KMVEKMPVEPNGGVWGALLG 352
+ E + E + W ++G
Sbjct: 320 DLFEGI-CEKDIISWNVMIG 338
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 336/550 (61%), Gaps = 20/550 (3%)
Query: 13 KYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL 70
+ K+P +T+ I + +G ++L M EG+ P + TLSA AC +SL
Sbjct: 81 RTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACR---GLSL 137
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +HA L + D YV ++ MY + G +R +FDEMP+ VVS T ++ YA
Sbjct: 138 GRALHAYAFKLA-LSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYA 196
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
N G ++ A LF+ LP KD + W AM+ GY Q+ KP EA++ F RM + E D VT+V
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVL 256
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+SA AQLG ++ W+ + S +N V V +AL+DMY KCGS++DA +F G+
Sbjct: 257 VLSAVAQLGTVESGKWLHSYVKNSRCVQLN-VRVATALVDMYCKCGSLEDAVAVFHGIGN 315
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
+++ +++MI G+AMHG + A+++F + P +TFIG+L ACSH GL
Sbjct: 316 KDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSF 375
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YG+ P +HY CMVDLLGRAG +EEA +V+ + + P+ +W +LL AC++H+
Sbjct: 376 FQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHK 435
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N + Q A+ L G YI+LSNIYA+ G W++V+RVR ++K +G++K PG S +
Sbjct: 436 NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E DR V +EF AGD++HP + EI L + ++ G+ P VL+D+ + K++ L
Sbjct: 496 EIDRKV-YEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALA 554
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AFGL+++ PG+T++I+KNLR C DCH + S++ R+IV RD RFHHF
Sbjct: 555 VHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFV 614
Query: 539 DGKCSCGNYW 548
DG C+CG+YW
Sbjct: 615 DGSCTCGDYW 624
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 32/239 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A+I GY G +++ L+ M R P T+ + A ++
Sbjct: 205 RRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQL 264
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ +H+ ++ V ++ MY KCG L + VF + +D+V W +
Sbjct: 265 GTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAM 324
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +GD R+A+E F +++ G+
Sbjct: 325 INGYAMHGD-------------------------------SRKALEMFVQLRDQGLWPTD 353
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T +G+++AC+ G+++ + E +G + ++D+ + G I++A+ +
Sbjct: 354 ITFIGLLNACSHSGLVEEGRSFFQSMEHE-YGIDPKIEHYGCMVDLLGRAGLIEEAFHL 411
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 332/558 (59%), Gaps = 22/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +++ W +I GY H + LY M+ G P + L + AC
Sbjct: 171 RFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHA 230
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++S G+ IH Q I GF ++ +++ MY CG + +R+V+D++P + +V T +
Sbjct: 231 GNLSYGKAIH-QFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAM 289
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA G ++ A +F+ + KD V W+AM++GY ++ +P EA++ F MQ + D
Sbjct: 290 LSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQ 349
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFG---PINNVVVGSALIDMYSKCGSIDDAY 242
+T++ VISACA +G + A W+ A+ +GFG PINN ALIDMY+KCG++ A
Sbjct: 350 ITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINN-----ALIDMYAKCGNLVKAR 404
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M ++NV S+SSMI FAMHG A +AI LF M + +PNGVTFIGVL ACSH G
Sbjct: 405 EVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAG 464
Query: 303 LKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G +SP +HY CMVDL RA L +A++++E MP PN +WG+L
Sbjct: 465 LVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSL 524
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
+ ACQ H E+ + AA L ELEPD G ++LSNIYA WDDV VR+L+K G+
Sbjct: 525 MSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVS 584
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K S +E + V H F D H S EI + L ++ +L+ GY P+ +L D+ +
Sbjct: 585 KEKACSRIEVNNEV-HVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEE 643
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEKK +++ HSEKLAL +GL+ + +RI+KNLRICEDCH FM S+V EIV+RD
Sbjct: 644 EEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRD 703
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF G CSC +YW
Sbjct: 704 RTRFHHFNGGICSCRDYW 721
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 183/399 (45%), Gaps = 76/399 (19%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
L+R + ++++SLY +RR G F+ L KA +++ ++LG +IH G
Sbjct: 86 LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
F +D ++ + +I MY CG + +R +FD+M RDVV+W +I
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI---------------- 189
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
GY QNA ++ +E M+ +G E D + L V+SACA G +
Sbjct: 190 ---------------DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLS 234
Query: 203 YANWVCEIAEGSGFG-----------------------------PINNVVVGSALIDMYS 233
Y + + + +GF P ++VV +A++ Y+
Sbjct: 235 YGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYA 294
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K G + DA IF M ++++ +S+MI G+A + A+QLF +M + P+ +T +
Sbjct: 295 KLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLS 354
Query: 294 VLTACSHVG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
V++AC++VG + Y G + ++D+ + G L +A ++ E MP
Sbjct: 355 VISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP-RK 413
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFE---LEPDKI 378
N W +++ A +H + + A IA H + +EP+ +
Sbjct: 414 NVISWSSMINAFAMHGDADSA-IALFHRMKEQNIEPNGV 451
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 333/559 (59%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R++F+++ KN WT LI GY QG + ++ L +M++ + P T +++ + C
Sbjct: 200 SKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGC 259
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T + G+++H + I+ G+ +L+V N++I MY KCG L
Sbjct: 260 TTPAALEHGKKVH-RYIIQSGYGRELWVVNSLITMYCKCGGL------------------ 300
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
E A LF++LP +D V WTAMVTGY Q EAI F RMQ G++
Sbjct: 301 -------------EEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +T V+++C+ ++ + + +G+ +V + SAL+ MY+KCGS+DDA
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL--DVYLQSALVSMYAKCGSMDDAS 405
Query: 243 RIFVGMKQRNVFSYSSMILGF-AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M +RNV +++++I G A HGR A++ F M K KP+ VTF VL+AC+HV
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 302 GLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YG+ P +HY+C VDLLGRAG LEEA ++ MP P VWGA
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL AC++H + E + AA ++ +L+PD G Y+ LS+IYA+AG ++D +VR++++ +
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG SW+E D G +H F D +HP S +I LG L ++++ GY P+ R VL+DV
Sbjct: 586 VKEPGQSWIEVD-GKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVD 644
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+E+K+RIL +HSE+LA+ +GL+ T PG +RI+KNLR+C DCH S+V+GREI+ R
Sbjct: 645 EEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIAR 704
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF DG CSCG++W
Sbjct: 705 DAQRFHHFADGVCSCGDFW 723
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 181/394 (45%), Gaps = 49/394 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ ++ +N WTA+I ++ ++ Y +M+ G P T +L A T
Sbjct: 102 RRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNP 161
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LGQ++H + I+ G + VG +++GMY KCG
Sbjct: 162 ELLQLGQKVHME-IVEAGLELEPRVGTSLVGMYAKCG----------------------- 197
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+ A +F+ LP K+ V WT ++ GY Q + A+E E MQ A V +
Sbjct: 198 --------DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNK 249
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T ++ C +++ V SG+G + V ++LI MY KCG +++A ++F
Sbjct: 250 ITFASILQGCTTPAALEHGKKVHRYIIQSGYG--RELWVVNSLITMYCKCGGLEEARKLF 307
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+ R+V ++++M+ G+A G AI LF M + KP+ +TF VLT+CS
Sbjct: 308 SDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQ 367
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
H L G + + +V + + G +++A + +M E N W A++ G
Sbjct: 368 EGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426
Query: 354 CQIHRNPEIAQIAANHLFE--LEPDKIGNYIILS 385
C H A + + + ++PDK+ +LS
Sbjct: 427 CAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLS 460
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 62/381 (16%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G LK+++ + +M +G S L + C + + G+++HA IL G + Y+
Sbjct: 26 GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHA-AILKSGIQPNRYL 84
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
NT++ MY KCG L +R+VFD + +R++VSW
Sbjct: 85 ENTLLSMYAKCGSLTDARRVFDSIRDRNIVSW---------------------------- 116
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CE 209
TAM+ +V K EA + +E M+ AG + D VT V +++A +++ V E
Sbjct: 117 ---TAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173
Query: 210 IAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
I E G P VG++L+ MY+KCG I A IF + ++NV +++ +I G+A G+
Sbjct: 174 IVEAGLELEP----RVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYAC 317
A++L M + E PN +TF +L C+ H + G
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFE---- 372
++ + + G LEEA K+ +P + W A++ G Q+ + E A +LF
Sbjct: 290 LITMYCKCGGLEEARKLFSDLP-HRDVVTWTAMVTGYAQLGFHDE-----AINLFRRMQQ 343
Query: 373 --LEPDKIGNYIILSNIYASA 391
++PDK+ +L++ + A
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPA 364
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/597 (38%), Positives = 341/597 (57%), Gaps = 58/597 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N + +IR Y+ G + + ++ +M + P +T + KAC+
Sbjct: 94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCS 153
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IH +G +S L+VGN ++ MY KCGFL +R V DEM RDVVSW L
Sbjct: 154 GTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 126 IVAYANNG----------DMES------AGGLFNELPL---------------------K 148
+V YA N +MES AG + + LP K
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M+ Y++NA P EA+E + RM+ G E D V++ V+ AC + +
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E P N+++ +ALIDMY+KCG ++ A +F MK R+V S+++MI + GR
Sbjct: 333 GYIERKKLIP--NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC-------YGVSPSTDHYA 316
A+ LF + + P+ + F+ L ACSH GL C Y ++P +H A
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA 450
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLLGRAG ++EA + ++ M +EPN VWGALLGAC++H + +I +AA+ LF+L P+
Sbjct: 451 CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPE 510
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W++V+ +R ++K GLKKNPG S +E +R +IH F GD +HP
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR-IIHTFLVGDRSHP 569
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS-- 494
S EI + L L+ +++ GY P+ S L+DV +E+K+ L HSEKLA+ F L+ T
Sbjct: 570 QSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEE 629
Query: 495 ---PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
T+RI KNLRIC DCH+ SQ+ REI++RD RFH F+ G CSCG+YW
Sbjct: 630 EEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ AYA+ D+ SA +F+E+P ++ + M+ YV N E ++ F M V
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D+ T V+ AC+ G I + A G + + VG+ L+ MY KCG + +A
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS--STLFVGNGLVSMYGKCGFLSEARL 196
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ M +R+V S++S+++G+A + R A+++ +M + + T +L A S+
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN 253
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N +G L+ Y+ + A ++F + +RNV + MI + +G +++FG M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLE 329
+P+ TF VL ACS +G K +G + + +V + G+ G L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 330 EALKMVEKMPVEPNGGVWGAL-LGACQIHRNPEIAQIAANHLFELEPDKIGNY--IILSN 386
EA ++++M + W +L +G Q R + ++ E+E KI + + S
Sbjct: 193 EARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCR----EMESVKISHDAGTMASL 247
Query: 387 IYA-SAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQAL 445
+ A S ++V V+ + G K ++ + G + N+ ++
Sbjct: 248 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG------------VYMKNAMPVEAV- 294
Query: 446 GDLLDRLQADGYQPNLRSV 464
+L R++ADG++P+ S+
Sbjct: 295 -ELYSRMEADGFEPDAVSI 312
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 344/555 (61%), Gaps = 17/555 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F++ N L A+ Y+ QG ++++ ++ M G+ P ++ + +C+++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ H +L GF S + N +I MY+KC + ++FD M + VV+W +
Sbjct: 351 RNILWGKSCHGY-VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
+ Y NG++++A F +P K+ V+W +++G VQ + EAIE F MQ GV D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT++ + SAC LG + A W+ E +G +V +G+ L+DM+S+CG + A I
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL--DVRLGTTLVDMFSRCGDPESAMSI 527
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + R+V ++++ I AM G A AI+LF DM++ KP+GV F+G LTACSH GL
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +GVSP HY CMVDLLGRAG LEEA++++E MP+EPN +W +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++ N E+A AA + L P++ G+Y++LSN+YASAG W+D+++VR +K GL+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG S ++ RG HEF +GD +HP I+ L ++ R G+ P+L +VL DV ++E
Sbjct: 708 PGTSSIQ-IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKE 766
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K +L HSEKLA+A+GL++++ G T+RI+KNLR+C DCH F AS+V REI++RDN
Sbjct: 767 KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNN 826
Query: 533 RFHHFQDGKCSCGNY 547
RFH+ + GKCSCG++
Sbjct: 827 RFHYIRQGKCSCGDF 841
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 41/312 (13%)
Query: 3 SFPRLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
SF + VFE + Y F++ +LIRGY G ++I L+ M GI P +T A
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + G QIH + +G + DL+V N+++ Y +CG
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMG-YAKDLFVQNSLVHFYAECG------------------- 183
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAG 180
+++SA +F+E+ ++ V+WT+M+ GY + ++A++ F RM +
Sbjct: 184 ------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + VT+V VISACA+L ++ V SG +N+++V SAL+DMY KC +ID
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI-EVNDLMV-SALVDMYMKCNAIDV 289
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F N+ ++M + G A+ +F M+ + +P+ ++ + +++CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 301 V-----GLKCYG 307
+ G C+G
Sbjct: 350 LRNILWGKSCHG 361
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 25/200 (12%)
Query: 116 ERDVVSWTELIVAYANNGDMES---AGGLF-NELPLKDKVAWTAMVTGYVQNAKPREAIE 171
+ DV + T+L+ G ES A +F N + +++ GY + EAI
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG---------FGPINNV 222
F RM +G+ D T +SACA+ A+G+G G ++
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAK-----------SRAKGNGIQIHGLIVKMGYAKDL 169
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK- 281
V ++L+ Y++CG +D A ++F M +RNV S++SMI G+A A A+ LF MV+
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 282 TETKPNGVTFIGVLTACSHV 301
E PN VT + V++AC+ +
Sbjct: 230 EEVTPNSVTMVCVISACAKL 249
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/568 (40%), Positives = 344/568 (60%), Gaps = 26/568 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGY-------ILQGHLKDSISLYCSMRREG-IGPVSFT 54
+ R F Q+ + N F W +IR + + +++ + M +G + P FT
Sbjct: 66 KYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFT 125
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ KAC ++ + G+Q+H + LG SD +V + ++ +YV CG + + +F +
Sbjct: 126 FPCVLKACAKLARIEEGKQLHGFVVKLG-LVSDEFVRSNLVRVYVMCGAMKDAHVLFYQT 184
Query: 115 P-ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
E +VV W +I Y GD+ ++ LF+ +P K V+W M++G QN +EAIE F
Sbjct: 185 RLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMF 244
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
MQ V +YVTLV V+ A ++LG I+ WV AE + I++V+ GSALIDMYS
Sbjct: 245 HDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEI-EIDDVL-GSALIDMYS 302
Query: 234 KCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
KCGSID A ++F G++ ++N ++S++I G AMHGRA A+ F M + P+ V +I
Sbjct: 303 KCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYI 362
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL+ACSH GL G+ P +HY CMVDLLGRAGCLEEA +++ MPV
Sbjct: 363 GVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPV 422
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
+P+ + ALLGAC++H N E+ + A L P G+Y+ LSN++AS G W+ V +V
Sbjct: 423 KPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKV 482
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R +K ++K+PG SW+E D GVIHEF D +HP + I L ++ DRL++ GY+PN
Sbjct: 483 RLKMKELDIRKDPGCSWIELD-GVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPN 541
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
VL ++ ++EK+ L HSEK+A+AFGL++T P ++I+KNLR+CEDCH + S+
Sbjct: 542 TTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSK 601
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ R+I+VRD RFHHF++G CSC +YW
Sbjct: 602 IYNRKIIVRDRKRFHHFENGSCSCMDYW 629
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/593 (38%), Positives = 339/593 (57%), Gaps = 56/593 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N + +IR Y+ G ++ I ++ +M + P +T + KAC+
Sbjct: 95 RKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCS 154
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +G++IH +G +S L+VGN ++ MY KCGFL +R V DEM RDVVSW L
Sbjct: 155 GNIVIGKKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 213
Query: 126 IVAYANNG----------DMES------AGGLFNELPL---------------------K 148
+ YA N +MES AG + + LP K
Sbjct: 214 VAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 273
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M+ Y++NA P EA+E + M+ G E D V++ V+ AC + +
Sbjct: 274 SLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 333
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E P N+++ +ALIDMY+KCG +D A +F MK R+V S+++MI + GR
Sbjct: 334 GYIERKKLIP--NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGR 391
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC-------YGVSPSTDHYA 316
A+ LF M + P+ + F+ L ACSH GL C Y ++P +H A
Sbjct: 392 GCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA 451
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLLGRAG ++EA K +++MP+EPN VWGALLGAC++H N +I +AA+ LF+L P+
Sbjct: 452 CMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPE 511
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W++V+ +R ++K GLKKNPG S +E +R +IH F GD +HP
Sbjct: 512 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR-IIHTFLVGDRSHP 570
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS-- 494
S EI + L L+ +++ GY P+ S L+DV +E+K+ L HSEKLA+ F L+ T
Sbjct: 571 QSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEE 630
Query: 495 -PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
+RI KNLRIC DCH+ SQ+ REI++RD RFH F+ G CSC +
Sbjct: 631 DSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCAS 683
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ AYA+ D+ +A +F+E+P ++ + M+ YV N RE I+ F M V+
Sbjct: 80 KLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKP 139
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D+ T V+ AC+ G I + A G + + VG+ L+ MY KCG + +A
Sbjct: 140 DHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS--STLFVGNGLVSMYGKCGFLSEARL 197
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+ M +R+V S++S++ G+A + R A+++ +M + + T +L A S+
Sbjct: 198 VLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N +G L+ Y+ + A ++F + +RNV + MI + +G IQ+FG M
Sbjct: 74 NSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMC 133
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLE 329
KP+ TF VL ACS +G K +G + + +V + G+ G L
Sbjct: 134 SCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 193
Query: 330 EALKMVEKM 338
EA ++++M
Sbjct: 194 EARLVLDEM 202
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/554 (40%), Positives = 330/554 (59%), Gaps = 47/554 (8%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L+F +++ ++P W+ +I G++ G + + + R G P +F+L + KAC + +
Sbjct: 56 LLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +G+ IH+ T+L G D +V +T++ MY KCG +
Sbjct: 116 GLIMGRLIHS-TVLKNGLHLDNFVCSTLVDMYAKCGMI---------------------- 152
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
++A LF+ +P KD V T M+ GY + KP E+ F++M+ G D V
Sbjct: 153 ---------DNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKV 203
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+V +++ACA+LG + A V + + +V +G+A+IDMY+KCGSID + IF
Sbjct: 204 AMVTIVNACAKLGAMNKARLVHDYVCARRYSL--DVELGTAMIDMYAKCGSIDSSREIFD 261
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK-- 304
M+Q+NV S+S+MI + HG+ A++LF M+ + PN +TFI +L ACSH GL
Sbjct: 262 RMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDD 321
Query: 305 ----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YGV P HY CMVDLLGRAG L++AL+++E M VE + G+W A LGAC
Sbjct: 322 GLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGAC 381
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IHR ++A+ AA L L+ G+YI+LSNIYA+AG W DV+++R L+ LKK PG
Sbjct: 382 RIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPG 441
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
Y+W+E D +I+ F AGD +H S EI + L L +L++ GY P+ SVL+DV +E K
Sbjct: 442 YTWIEVD-NIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKL 500
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
IL HSEKLA+AFGL+ T G +RI KNLR+C DCH F S + R+I+VRD RF
Sbjct: 501 GILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRF 560
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSCG+YW
Sbjct: 561 HHFKEGICSCGDYW 574
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 54/318 (16%)
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
F +S LFK C + + +Q+HAQ + G DL V N ++ M K
Sbjct: 5 FFISTLFK-CRNIFQI---KQVHAQ-VTTTGIIHDLIVANKLLYMCAK------------ 47
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ D+ +A LFN++ +D V+W+ M+ G+V+N +
Sbjct: 48 -------------------HKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQT 88
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F + AG + D +L VI AC + + +G N V S L+DMY
Sbjct: 89 FRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDN--FVCSTLVDMY 146
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG ID+A ++F M ++++ + + MI G+A G+ + + LF M + P+ V +
Sbjct: 147 AKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMV 206
Query: 293 GVLTACSHVGLKCYGVSPSTDHYAC-------------MVDLLGRAGCLEEALKMVEKMP 339
++ AC+ +G + Y C M+D+ + G ++ + ++ ++M
Sbjct: 207 TIVNACAKLG--AMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRME 264
Query: 340 VEPNGGVWGALLGACQIH 357
+ N W A++GA H
Sbjct: 265 -QKNVISWSAMIGAYGYH 281
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ KN W+A+I Y G ++++ L+ M GI P T +L AC+
Sbjct: 257 REIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHA 316
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G Q+ + + G D+ M+ + + G L + ++ + M E+D W
Sbjct: 317 GLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCA 376
Query: 125 LIVA 128
+ A
Sbjct: 377 FLGA 380
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 339/592 (57%), Gaps = 53/592 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN + +IR Y+ D++ ++ +M GI P +T + KA +
Sbjct: 1080 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 1139
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ +G QIHA + +G +++VGN +I MY KCG L + +V DZMP RDVVSW L
Sbjct: 1140 EDLWVGMQIHAAVVRVG-LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSL 1198
Query: 126 IVAYANNGDMESA-------------------------------------GGLFNELPLK 148
+ A NG + A +F +L K
Sbjct: 1199 VAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANK 1258
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M+ Y+ N+ P EA++ F +M+ V+ D +++ V+ AC L + +
Sbjct: 1259 SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIH 1318
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E P N+++ +ALIDMY+KCG ++ A +F MK R+V S++SMI + M+G+
Sbjct: 1319 EYVVRKRLQP--NLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGK 1376
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDHYA 316
A+ LF M P+ + F+ VL+ACSH GL G + P +H+
Sbjct: 1377 GRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 1436
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLLGRAG ++EA +++MP+EPN VWGALL AC+++ N I +AA+ LF+L P+
Sbjct: 1437 CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPE 1496
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W+DV+ VR ++K G+KK PG S E D V H F AGD +HP
Sbjct: 1497 QSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRV-HTFLAGDQSHP 1555
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
S +I + L L+ +++ GY P S L+DV +E+K+ L HSEKLA+AF +L T+PG
Sbjct: 1556 QSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPG 1615
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ +RI KNLR+C DCH+ S+++GREI +RD RFHHF +G CSCG+YW
Sbjct: 1616 SPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 54/287 (18%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
SF + +F ++ K+ W +I Y+ +++ ++ M + P + +++++ AC
Sbjct: 1246 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG++IH + ++ +L + N +I MY KCG L +R+VFD+M RDVVSW
Sbjct: 1306 GDLSALLLGRRIH-EYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 1364
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I AY NG K R+A+ F RMQ G+
Sbjct: 1365 TSMISAYGMNG-------------------------------KGRDAVSLFSRMQDLGLN 1393
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGP-INNVVVGSALIDMYSKCGSIDD 240
D + V V+SAC+ G++ + ++ E P I + V ++D+ + G +D+
Sbjct: 1394 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV---CMVDLLGRAGQVDE 1450
Query: 241 AYRIFVGM---KQRNVFS--------YSSMILGFAMHGRAHAAIQLF 276
AY M V+ YS+MI+G AA QLF
Sbjct: 1451 AYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL------AADQLF 1491
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ AYA G+ S +F+E+P K+ V + M+ YV N +A+ F+ M G++
Sbjct: 1065 KLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDP 1124
Query: 184 DYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ T V+ A + +G+ +A V G NV VG+ LI MY KCG +
Sbjct: 1125 DHYTYPCVLKASSGSEDLWVGMQIHAAVV-------RVGLDLNVFVGNGLISMYGKCGCL 1177
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A R+ M R+V S++S++ G A +G+ A+++ +M KP+ T +L A
Sbjct: 1178 VEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV 1237
Query: 299 SHVGL 303
++ L
Sbjct: 1238 TNTCL 1242
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+N +G L+ Y+ CG IF + ++NV ++ MI + + A+ +F +M
Sbjct: 1058 SNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM 1117
Query: 280 VKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCL 328
P+ T+ VL A S H + G+ + ++ + G+ GCL
Sbjct: 1118 AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCL 1177
Query: 329 EEALKMVEKMPVEPNGGVWGALLGAC 354
EA +++++MP + W +L+ C
Sbjct: 1178 VEACRVLDZMPCR-DVVSWNSLVAGC 1202
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/545 (40%), Positives = 333/545 (61%), Gaps = 16/545 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W+ALI + +++I + M + G+ + AC +L
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 391
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V++G+ IH+ ++ +G S + + N +I MY KCG + +RK+FDE D++SW +I
Sbjct: 392 VNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y +++A +F+ +P KD V+W++M++GY QN E + F+ MQ +G + D T
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VISACA+L ++ WV + +G NV++G+ LIDMY KCG ++ A +F G
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTI--NVILGTTLIDMYMKCGCVETALEVFYG 568
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M ++ + +++++ILG AM+G +++ +F +M K PN +TF+GVL AC H+GL G
Sbjct: 569 MIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 628
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ P+ HY CMVDLLGRAG L+EA +++ +MP+ P+ WGALLGAC+
Sbjct: 629 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 688
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H + E+ + L EL+PD G +++LSNIYAS G WDDV +R ++ + K PG
Sbjct: 689 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGC 748
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + GVIHEF AGD THP+ I+ L ++ +L+ +GY P++ VL DV +EEK+
Sbjct: 749 SMIEAN-GVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 807
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL+ SP +RIMKNLRIC DCH S+ R+IVVRD RFH
Sbjct: 808 TLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFH 867
Query: 536 HFQDG 540
HF+ G
Sbjct: 868 HFEQG 872
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 174/400 (43%), Gaps = 77/400 (19%)
Query: 25 RGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGF 84
R YI + +LY SM +G ++T L +AC+ +Q+H + LG F
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLG-F 244
Query: 85 TSDLYVGNTMIGMYVKCGFLGCSRKVFDE------------------------------- 113
SD+YV NT+I + C + + +VF+E
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQ 304
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MPER +++ +IV + G + A LF+E+ KD V W+A++ + QN EAI F
Sbjct: 305 MPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 364
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M GV D V V +SACA L V+ + ++ G N + +ALI MYS
Sbjct: 365 VGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN--LQNALIYMYS 422
Query: 234 KCGSI-------------------------------DDAYRIFVGMKQRNVFSYSSMILG 262
KCG I D+A IF M +++V S+SSMI G
Sbjct: 423 KCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISG 482
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPS 311
+A + + LF +M + KP+ T + V++AC+ H +K G++ +
Sbjct: 483 YAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN 542
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++D+ + GC+E AL++ M +E W AL+
Sbjct: 543 VILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 32/196 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+ + K+ W+++I GY ++++L+ M+ G P TL ++ AC +
Sbjct: 462 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 521
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +HA I G T ++ +G T+I MY+KCG + + +VF M E+ + +W L
Sbjct: 522 AALEQGKWVHAY-IKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNAL 580
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ A NG +ES +++ F M+ V +
Sbjct: 581 ILGLAMNGLVES-------------------------------SLDMFSNMKKCHVTPNE 609
Query: 186 VTLVGVISACAQLGVI 201
+T +GV+ AC +G++
Sbjct: 610 ITFMGVLGACRHMGLV 625
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 326/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ KN WTA+I GYI G +++ L+ + G+ P SFTL + AC+ V
Sbjct: 157 RKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRV 216
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D++ G+ I + G +++V +++ MY KCG
Sbjct: 217 GDLASGRWIDGY-MRESGSVGNVFVATSLVDMYAKCG----------------------- 252
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
ME A +F+ + KD V W+A++ GY N P+EA++ F MQ V D
Sbjct: 253 --------SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+VGV SAC++LG ++ NW + +G F ++N V+G+ALID Y+KCGS+ A +F
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEF--LSNPVLGTALIDFYAKCGSVAQAKEVF 362
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
GM++++ ++++I G AM G AA +FG MVK +P+G TF+G+L C+H GL
Sbjct: 363 KGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVD 422
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ V+P+ +HY CMVDL RAG L EA ++ MP+E N VWGALLG
Sbjct: 423 DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H++ ++A+ L ELEP G+Y++LSNIY+++ WD+ ++R L G++K P
Sbjct: 483 CRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLP 542
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E D GV+HEF GD +HP S +I + L L L+ GY P VL+DV +EEK
Sbjct: 543 GCSWVEVD-GVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEK 601
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L++T +R++KNLR+C DCH + S+V GREI+VRDN R
Sbjct: 602 EYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNR 661
Query: 534 FHHFQDGKCSCGNYW 548
FHHF +G CSC +YW
Sbjct: 662 FHHFTEGSCSCRDYW 676
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 161/299 (53%), Gaps = 33/299 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ +VF Q + N FL+ LIRG + +D++S+Y SMR+ G P +FT + KACT
Sbjct: 53 YATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACT 112
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +VG ++ + +K GF + DV T
Sbjct: 113 RL-------------------PHYFHVGLSLHSLVIKTGF------------DWDVFVKT 141
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ Y+ NG + A +F+E+P K+ V+WTA++ GY+++ EA+ F + G+
Sbjct: 142 GLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRP 201
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TLV ++ AC+++G + W+ S G + NV V ++L+DMY+KCGS+++A R
Sbjct: 202 DSFTLVRILYACSRVGDLASGRWIDGYMRES--GSVGNVFVATSLVDMYAKCGSMEEARR 259
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F GM +++V +S++I G+A +G A+ +F +M + +P+ +GV +ACS +G
Sbjct: 260 VFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLG 318
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/595 (36%), Positives = 337/595 (56%), Gaps = 53/595 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F++ KN + +IR Y+ +++S++ M P +T + KAC
Sbjct: 88 SVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKAC 147
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + ++ +G Q+H I+ G ++L++GN ++ MY KCG L +RKV D+MP RDVVSW
Sbjct: 148 SGLDNLRVGLQVH-DAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 123 TELIVAYANNGDMESA-------------------------------------GGLFNEL 145
++ YA +G + A +F +
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERM 266
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
K+ ++W M+ YV N+ P EA+ F +M+ G++ D VT+ ++ AC L +
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + E P N+++ +AL+DMY+KCG +++A +F M+ R+V S++SM+ +
Sbjct: 327 RLHKYIEKGNLQP--NLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR 384
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTD 313
G+ + A+ LF M+ + P+ + F+ VL+ACSH GL + YG+ P +
Sbjct: 385 SGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIE 444
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL 373
H+ACMVDL GRAG +EEA +++MP+EPN VWGALL AC++H +I +AA+ LF+L
Sbjct: 445 HFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504
Query: 374 EPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
P + G Y++LSNIYA AGMW DV VR +K G+KK PG S +E + G +H F AGD
Sbjct: 505 APKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELN-GQVHTFLAGDQ 563
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
HP + I L L+ +++ GY P S L+DV E+K+ L HSEKLA+ F +L T
Sbjct: 564 YHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNT 623
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +RI KNLR+C DCH+ + S+++ R I+VRD RFHHF +G CSCG+YW
Sbjct: 624 KQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
S+ V +E D +L+ AY+ G+ A +F+ K+ V + M+ YV N
Sbjct: 59 SKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLY 118
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+ F+ M D+ T V+ AC+ L ++ V + G N+ +G+
Sbjct: 119 VEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD--TNLFIGN 176
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
AL+ MY KCG + +A ++ M R+V S++SM+ G+A G+ A+++ +M
Sbjct: 177 ALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ YS G A IF ++NV ++ MI + + A+ +F M+ P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 288 GVTFIGVLTACS-----HVGLKCYG----VSPSTDHYA--CMVDLLGRAGCLEEALKMVE 336
TF VL ACS VGL+ + V T+ + +V + G+ GCL EA K+++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 337 KMP 339
+MP
Sbjct: 197 QMP 199
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/595 (36%), Positives = 337/595 (56%), Gaps = 53/595 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F++ KN + +IR Y+ +++S++ M P +T + KAC
Sbjct: 88 SVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKAC 147
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + ++ +G Q+H I+ G ++L++GN ++ MY KCG L +RKV D+MP RDVVSW
Sbjct: 148 SGLDNLRVGLQVH-DAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 123 TELIVAYANNGDMESA-------------------------------------GGLFNEL 145
++ YA +G + A +F +
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERM 266
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
K+ ++W M+ YV N+ P EA+ F +M+ G++ D VT+ ++ AC L +
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + E P N+++ +AL+DMY+KCG +++A +F M+ R+V S++SM+ +
Sbjct: 327 RLHKYIEKGNLRP--NLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR 384
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTD 313
G+ + A+ LF M+ + P+ + F+ VL+ACSH GL + YG+ P +
Sbjct: 385 SGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIE 444
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL 373
H+ACMVDL GRAG +EEA +++MP+EPN VWGALL AC++H +I +AA+ LF+L
Sbjct: 445 HFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504
Query: 374 EPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
P + G Y++LSNIYA AGMW DV VR +K G+KK PG S +E + G +H F AGD
Sbjct: 505 APKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELN-GQVHTFLAGDQ 563
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
HP + I L L+ +++ GY P S L+DV E+K+ L HSEKLA+ F +L T
Sbjct: 564 YHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNT 623
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +RI KNLR+C DCH+ + S+++ R I+VRD RFHHF +G CSCG+YW
Sbjct: 624 KQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
S+ V +E D +L+ AY+ G+ A +F+ K+ V + M+ YV N
Sbjct: 59 SKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLY 118
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+ F+ M D+ T V+ AC+ L ++ V + G N+ +G+
Sbjct: 119 VEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD--TNLFIGN 176
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
AL+ MY KCG + +A ++ M R+V S++SM+ G+A G+ A+++ +M
Sbjct: 177 ALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ YS G A IF ++NV ++ MI + + A+ +F M+ P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 288 GVTFIGVLTACS-----HVGLKCYG----VSPSTDHYA--CMVDLLGRAGCLEEALKMVE 336
TF VL ACS VGL+ + V T+ + +V + G+ GCL EA K+++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 337 KMP 339
+MP
Sbjct: 197 QMP 199
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/588 (40%), Positives = 337/588 (57%), Gaps = 51/588 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++ + KN +L+ ALIRG + SIS + M + I P T + K+ + +
Sbjct: 96 IFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSN 155
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE-------------- 113
+G+ +H IL G D +V +++ MYVK LG + KVFDE
Sbjct: 156 GGVGRALHC-GILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWN 214
Query: 114 ---------------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
MP++D SW LI + GDM A LF ++P K+ V+
Sbjct: 215 VLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVS 274
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
WT MV G+ QN P +A+E F M G + T+V +SACA++G + +
Sbjct: 275 WTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLS 334
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
G+GF N+V+G+AL+DMY+KCG+I+ A ++F K++ + +S MI G+A+HG A
Sbjct: 335 GNGFKL--NLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKA 392
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVD 320
+Q F M T TKP+ V F+ VL ACSH G + Y + PS HY +VD
Sbjct: 393 LQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVD 452
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
+LGRAG L+EALK + MP+ P+ VWGAL AC+ H+N E+A++A+ L +LEP G+
Sbjct: 453 MLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGS 512
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTE 440
Y+ LSN YAS G WDD RVR ++ G K+PG+S++E D +H F AGD TH + E
Sbjct: 513 YVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHK-LHRFVAGDNTHNRAVE 571
Query: 441 IQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVR 500
I L ++ + GY + VL+++ +EEK+ L HSEKLALAFG+++T PG TVR
Sbjct: 572 IYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVR 631
Query: 501 IMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
I+KNLR+C DCH FM AS++ REI++RD RFHHF DG CSCG+YW
Sbjct: 632 IVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 32/240 (13%)
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ET ++ L+ ++ +L I + C + S V + I S S+D
Sbjct: 41 LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSR--------VVTQFISSCSSLNSVDY 92
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
A IF + +N + ++++I G A + R ++I F M+K + P+ +TF VL + +
Sbjct: 93 AISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAA 152
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG---V 346
H G+ +G+ + +VD+ + L ALK+ ++ P G +
Sbjct: 153 LSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLI 212
Query: 347 WGALL-GACQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLL 404
W L+ G C++ + A LF+ P K G++ L N + G D+ R + L
Sbjct: 213 WNVLIHGYCRMG-----DLVKATELFDSMPKKDTGSWNSLINGFMKMG---DMGRAKELF 264
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/553 (39%), Positives = 324/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + WTALI Y+ G L++++ + + G+ P SFT + AC V D
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ + + G ++V + +YVKCG + +R+VFD+M RD
Sbjct: 188 LATGETV-WRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RD--------- 235
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD VAW AMV GY N PREA++ F MQ GV D
Sbjct: 236 --------------------KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYA 275
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G +SAC +LG + + + F ++N V+G+ALIDMY+KCGS +A+ +F
Sbjct: 276 VAGALSACTRLGALDLGRQAIRMVDWDEF--LDNPVLGTALIDMYAKCGSTAEAWVVFQQ 333
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++++ +++MILG M G A L G M K+ K N TFIG+L +C+H GL
Sbjct: 334 MRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDG 393
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y +SP +HY C+VDLL RAG L+EA ++++ MP+ N + GALLG C+
Sbjct: 394 RRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCK 453
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN E+A+ L LEP GNY++LSNIY++ G W+D +++R +K G++K P
Sbjct: 454 IHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPAC 513
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEFR GD +HP S +I + L +L ++ GY+P V++DV DEEK+
Sbjct: 514 SWVEFE-GKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEH 572
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AF LL T PG T+R+ KNLR+C DCH + S++ REI+VRDN RFH
Sbjct: 573 TLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFH 632
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 633 CFRDGSCSCNDYW 645
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 36 SISLYCSMRREGIGPVSFTLSALFKACTEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTM 94
++ L+C + P T K+ + + + G+Q+HA+++ L T+ +V ++
Sbjct: 58 ALRLHCLLP----NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNP-HVLTSL 112
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ +Y +CG L +++V F+E+P V+WT
Sbjct: 113 LTLYARCGLLHRAQRV-------------------------------FDEMPHPSTVSWT 141
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
A++T Y+ REA+ G+ D T V V++ACA++ + V AE
Sbjct: 142 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 201
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G +V V +A +D+Y KCG + A +F M+ ++ ++ +M+ G+A +G A+
Sbjct: 202 GIA--QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALD 259
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVG 302
LF M +P+ G L+AC+ +G
Sbjct: 260 LFLAMQAEGVRPDCYAVAGALSACTRLG 287
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ K+ W A++ GY GH ++++ L+ +M+ EG+ P + ++ ACT +
Sbjct: 227 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 286
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q + + F + +G +I MY KCG + VF +M ++D++ W +
Sbjct: 287 GALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAM 345
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ G ++A L + M+ +GV+ +
Sbjct: 346 ILGLGMTGHEKTAFTLIGQ-------------------------------MEKSGVKLND 374
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T +G++ +C G+I+ + + + P + ++D+ S+ G + +A+++
Sbjct: 375 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP--RIEHYGCIVDLLSRAGLLQEAHQL 432
Query: 245 FVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M N +++ G +H A A + +++ E +G
Sbjct: 433 IDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSG 477
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V ++L+ +Y++CG + A R+F M + S++++I + G A+ + +
Sbjct: 104 TNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNA 163
Query: 280 VKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACMVDLLGRAGCL 328
+P+ T + VLTAC+ V + G++ S VDL + G +
Sbjct: 164 FANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEM 223
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+A ++ +KM + + WGA++G + +P A
Sbjct: 224 AKAREVFDKMR-DKDAVAWGAMVGGYASNGHPREA 257
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/550 (43%), Positives = 327/550 (59%), Gaps = 21/550 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKACTEVLDVSLGQQI 74
N W L+ G G +D++ +M EG+ P + +S A +V VS+GQQ+
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + G +D V +I MY KCG +VFDE DV S LI + N
Sbjct: 180 HGYAVK-AGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQ 238
Query: 135 MESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+ A LF E + + V+WT++V VQN K EA+E+F MQ G E + VT+
Sbjct: 239 VCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPC 298
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+ A A + + + A GF +++V V SAL+DMY+KCG + DA IF M
Sbjct: 299 VLPAFANVAALMHGRSAHCFALRKGF--LHDVYVSSALVDMYAKCGRVKDARIIFDTMVS 356
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
RNV S+++MI G+AM+G A A+ +F M+K + KP+ VTF +L AC+ GL
Sbjct: 357 RNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHY 416
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YGVSP +HYACMV LLGRAG L+EA ++ MP EP+ +WG+LLG+C++H
Sbjct: 417 FKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHG 476
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N ++A++AA LF LEP+ GNY++LSNIYAS MWD V+RVR ++K GLKK G SW+
Sbjct: 477 NVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWI 536
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E + +H AGD +HP T I + + L +++ G+ P+ VL+DV ++EK IL
Sbjct: 537 E-IKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILA 595
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+A GL++TSPG T+R++KNLRIC DCH M S GREI VRD RFHHF
Sbjct: 596 VHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFS 655
Query: 539 DGKCSCGNYW 548
GKCSCG++W
Sbjct: 656 GGKCSCGDFW 665
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
+ S SL+ +R P L FK+C + L + +HA + G D +V +
Sbjct: 1 MPHSSSLHHFLRHVSFPPDPHLLPTAFKSCPTL---PLARALHA-VAEVSGLARDPFVAS 56
Query: 93 TMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLK-- 148
+++ Y++ G G +R +FD MP +R VV W+ L+ A+A GD E A L E+
Sbjct: 57 SLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGG 116
Query: 149 ---DKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVGVISACAQLGVIKYA 204
+ + W +V+G ++ + R+A+ M G + D + +SA +G++
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVG 176
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
+ A +G + V +ALIDMY KCG + R+F +V S +++I G +
Sbjct: 177 QQLHGYAVKAGCRA--DACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLS 234
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+ + A++LF + V + N V++ ++ C G
Sbjct: 235 RNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNG 272
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ + +N W A+I GY + G +++ ++ SM + P T + L ACT+
Sbjct: 348 RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQA 407
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
G+ + G + + M+ + + G L + + +MP E D W
Sbjct: 408 GLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGS 467
Query: 125 LIVAYANNGDMESA 138
L+ + +G+++ A
Sbjct: 468 LLGSCRVHGNVDLA 481
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/563 (40%), Positives = 341/563 (60%), Gaps = 31/563 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACTEV 65
VF ++++ N F++ ALI+G+ + +S+ LY M V F++ ++ KAC ++
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L G+Q+H Q +L D +VGN+M+ MY+ G + +R+VFD MP RDVVSW +
Sbjct: 123 LAFDEGRQVHGQ-VLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y G++E A +F + KD V WT+M++ YVQN P +A++ F M G+ D
Sbjct: 182 IAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDG 241
Query: 186 VTLVGVISACAQLGVIKYANWV------CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+V V+SA A LG ++ W+ +I SGF +GSALIDMYSKCG I+
Sbjct: 242 PAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGF-------IGSALIDMYSKCGYIE 294
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+AY +F + +RN+ ++SMI G A+HG A A+ +F +M + + +PN +TF+G+L+ C
Sbjct: 295 NAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTC 354
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL + Y + P HY CM+DL GRAG LE+AL +++ MP E +
Sbjct: 355 SHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA 414
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W A+L A H + EI + AA EL PD +Y++LSNIYA AG WDDV+++R +++
Sbjct: 415 WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQ 474
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAG-DLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+KK G S + + G +HEF G +L S ++ + +++ RL+ GY+P+L VL
Sbjct: 475 RGVKKIAGCSSMLVN-GKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVL 533
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D+ DE K+ +L HSEK+A+AFGL+ + A + I+KNLR+C DCH FM S+V R+
Sbjct: 534 LDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQ 593
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF++G CSC YW
Sbjct: 594 IIMRDQNRFHHFENGCCSCNEYW 616
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 130/316 (41%), Gaps = 65/316 (20%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLK------------------DSISLY----C 41
R VF+++ ++ W ++I GY+ G ++ IS Y C
Sbjct: 162 LARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRC 221
Query: 42 SMR-----RE----GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
M+ RE G+ P + ++ A ++ V G+ +HA + S ++G+
Sbjct: 222 PMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGS 281
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+I MY KCG++ + VF + R N GD
Sbjct: 282 ALIDMYSKCGYIENAYHVFRSISHR------------RNIGD------------------ 311
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W +M++G + REA++ F M+ +E + +T +G++S C+ G+++ + E +
Sbjct: 312 WNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE-SM 370
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHA 271
+ + + +ID++ + G ++DA + M + ++ ++ +++ HG H
Sbjct: 371 HEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG--HI 428
Query: 272 AIQLFGDMVKTETKPN 287
I + E P+
Sbjct: 429 EIGKSAALRAIELAPD 444
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 340/591 (57%), Gaps = 52/591 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q+ + + +I G+ G ++ + M+ EG +T ++ AC+++
Sbjct: 109 RAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQL 168
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD+ G+QIH + I+ ++V N + MY KCG L +R +FD M ++VVSW +
Sbjct: 169 LDIKRGKQIHGR-IVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSM 227
Query: 126 IVAYANNG----------DMESAGGL-------------------------FNELPLKDK 150
I Y NG +M+S+G + F E+ KDK
Sbjct: 228 ISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDK 287
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
V WT M+ G QN K +A+ F M V D T+ V+S+CA+L + V
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAV--H 345
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ FG ++++V SAL+DMYSKCG DA+ +F M RNV S++SMILG+A +G+
Sbjct: 346 GKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDL 405
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACM 318
A+ L+ +M+ KP+ +TF+GVL+AC H GL K +G++P+ DHY+CM
Sbjct: 406 EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCM 465
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
++LLGRAG +++A+ +++ M EPN +W LL C+I+ + ++AA HLFEL+P
Sbjct: 466 INLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNA 525
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
G YI+LSNIYA+ G W DV+ VR L+K +KK YSW+E D V H+F A D TH +
Sbjct: 526 GPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQV-HKFVAEDRTHSET 584
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGAT 498
+I + L L+ +LQ G+ P+ VL+DV +EEK + HSEKLALAF L+ G T
Sbjct: 585 EQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRT 644
Query: 499 -VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RIMKN+R+C DCH+FM S++I R I++RD RFHHF +G+CSC + W
Sbjct: 645 PIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 12/313 (3%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
S + + L C DV +++ L +D ++ N ++ +Y K G L +R +F
Sbjct: 22 SESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLF 81
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D+M RDV SW ++ AY+ +G++E +F+++ + D V++ ++ G+ N +A+E
Sbjct: 82 DKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALE 141
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+F RMQ G E+ T V V+ AC+QL IK + + G +V V +AL +M
Sbjct: 142 FFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGE--SVFVWNALTNM 199
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+KCG++D A +F M +NV S++SMI G+ +G+ +LF +M + P+ VT
Sbjct: 200 YAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI 259
Query: 292 IGVLTA---CSHVGLKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVE--- 341
+L+A C ++ C + + M+ + G E+AL + +M +E
Sbjct: 260 SNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVR 319
Query: 342 PNGGVWGALLGAC 354
P+ +++ +C
Sbjct: 320 PDNFTISSVVSSC 332
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 334/554 (60%), Gaps = 19/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++N W +I GY G ++++ L ++ R G+ P +L++ F AC+ +
Sbjct: 374 LFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGA 433
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+H+ + G F S YV N +I MY KC + R+VF+ M +D VSW I
Sbjct: 434 LETGRQVHSLAVKAGCQFNS--YVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFI 491
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A N +E A +F+ + +D V+WT +++ Y Q + EA+E+F+ M + + +
Sbjct: 492 AALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSP 551
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L ++S C LG K + +A G + ++V +AL+ MY KCG D ++++F
Sbjct: 552 ILTILLSVCGGLGSAKLGQQIHTVAIKHGMD--SELIVANALMSMYFKCGCAD-SHKVFD 608
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M++R++F++++ I G A HG AI+++ M PN VTF+G+L ACSH GL
Sbjct: 609 SMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDE 668
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG++P +HYACMVDLLGR G ++ A K + MP+EP+ +W ALLGAC
Sbjct: 669 GWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGAC 728
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N EI + AA LF EP GNY++LSNIY+S GMW +V+ +R+++K G+ K PG
Sbjct: 729 KIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPG 788
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW++ R +H F GD H EI L DL L+ GY P+ VL+D+ +E+K+
Sbjct: 789 CSWMQ-IRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKE 847
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L+ HSEKLA+A+GLL T G ++IMKNLRIC DCH F+ S V R+I +RD RF
Sbjct: 848 SSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRF 907
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSCG++W
Sbjct: 908 HHFRNGSCSCGDFW 921
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 176/362 (48%), Gaps = 19/362 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +++ W ++I Y G L+D+ L+ ++ + + LS +
Sbjct: 53 REVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYAR----- 107
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ + A+ + G + N M+ YV+ G + +R++FD MP RDV SW +
Sbjct: 108 ----LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSM 163
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y ++ M A LF ++P ++ V WT M++GYV+ + + + F M + G D
Sbjct: 164 VTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQ 223
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS-IDDAYRI 244
V+SA L + + + +GF ++VV+G++++++Y++ S +D A +
Sbjct: 224 SNFASVLSAVTGLQDLGVLEVLRPLVLKTGFE--SDVVIGTSILNVYTRDASALDIAIKF 281
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG-DMVKTETKPNGVTFIGVLTACSHVG- 302
F GM +RN +++S+MI + GR AAI ++G D VK + P+ + L C +
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVK--SIPSQTALLTGLARCGRITE 339
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
L P + M+ + G ++EA ++ ++MP G + G Q R+
Sbjct: 340 ARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRS 399
Query: 360 PE 361
E
Sbjct: 400 EE 401
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 73/325 (22%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+ + +N + W+ +I G + +I++Y G PV
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDPV----------------- 318
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+ I +QT LL G +CG + +R +F+++P+ VVSW +I
Sbjct: 319 ---KSIPSQTALLTGLA--------------RCGRITEARILFEQIPDPIVVSWNAMITG 361
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y NG ++ A LF+ +P ++ ++W M+ GY QN + EA++ + + G+ +L
Sbjct: 362 YMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSL 421
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS----------- 237
AC+ +G ++ V +A +G N V +ALI MY KC +
Sbjct: 422 TSSFLACSHIGALETGRQVHSLAVKAGCQ--FNSYVCNALISMYGKCRNMEYVRQVFNRM 479
Query: 238 --------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
++DA IF M R+V S++++I +A R A++ F
Sbjct: 480 RVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFK 539
Query: 278 DMVKTETKPNGVTFIGVLTACSHVG 302
M+ KPN +L+ C +G
Sbjct: 540 TMLHEHEKPNSPILTILLSVCGGLG 564
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 174/403 (43%), Gaps = 62/403 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ +N WT +I GY+ ++ M EG P +++ A T + D
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQD 238
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK-CGFLGCSRKVFDEMPERDVVSWTELI 126
+ + ++ +L GF SD+ +G +++ +Y + L + K FD M ER+ +W+ +I
Sbjct: 239 LGV-LEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMI 297
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A ++ G +++A ++ P+K + TA++TG + + EA FE++
Sbjct: 298 AALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQI---------- 347
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
P VV +A+I Y + G +D+A +F
Sbjct: 348 -------------------------------PDPIVVSWNAMITGYMQNGMVDEAKELFD 376
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
M RN S++ MI G+A +GR+ A+ L + + P+ + ACSH+G
Sbjct: 377 RMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALET 436
Query: 307 GVSPST---------DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G + + Y C ++ + G+ +E ++ +M V+ W + + A
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAALV 495
Query: 356 IHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDD 396
+ E A+ H+F+ L D + I+S YA A D+
Sbjct: 496 QNNMLEDAR----HIFDNMLSRDVVSWTTIIS-AYAQAERGDE 533
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 35/284 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ WT +I Y +++ + +M E P S L+ L C +
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LGQQIH I G S+L V N ++ MY KCG S KVFD M ERD+ +W
Sbjct: 564 GSAKLGQQIHTVAI-KHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTF 621
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I TG Q+ REAI+ +E M+ GV +
Sbjct: 622 I-------------------------------TGCAQHGLGREAIKMYEHMESVGVLPNE 650
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT VG+++AC+ G++ W + +G + + ++D+ + G + A +
Sbjct: 651 VTFVGLLNACSHAGLVD-EGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFI 709
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M + + +S+++ +H A + + TE G
Sbjct: 710 YDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAG 753
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
+ G L +R+VFD MP RD+++W +I AY N+G +E A LF+ + + T +++G
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSG 104
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
Y + + +A F+ M E + V ++S Q G I A + + P
Sbjct: 105 YARLGRVLDARRVFDGMP----ERNTVAWNAMVSCYVQNGDITMARRLFDAM------PS 154
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+V ++++ Y + DA+ +F M QRN+ +++ MI G+ + +F M
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214
Query: 280 VKTETKPNGVTFIGVLTACSHVGLKCYGV 308
P+ F VL+A + GL+ GV
Sbjct: 215 HHEGASPDQSNFASVLSAVT--GLQDLGV 241
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/553 (39%), Positives = 324/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + WTALI Y+ G L++++ + + G+ P SFT + AC V D
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ + + G ++V + +YVKCG + +R+VFD+M RD
Sbjct: 235 LATGETV-WRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RD--------- 282
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD VAW AMV GY N PREA++ F MQ GV D
Sbjct: 283 --------------------KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYA 322
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G +SAC +LG + + + F ++N V+G+ALIDMY+KCGS +A+ +F
Sbjct: 323 VAGALSACTRLGALDLGRQAIRMVDWDEF--LDNPVLGTALIDMYAKCGSTAEAWVVFQQ 380
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++++ +++MILG M G A L G M K+ K N TFIG+L +C+H GL
Sbjct: 381 MRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDG 440
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y +SP +HY C+VDLL RAG L+EA ++++ MP+ N + GALLG C+
Sbjct: 441 RRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCK 500
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN E+A+ L LEP GNY++LSNIY++ G W+D +++R +K G++K P
Sbjct: 501 IHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPAC 560
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEFR GD +HP S +I + L +L ++ GY+P V++DV DEEK+
Sbjct: 561 SWVEFE-GKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEH 619
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AF LL T PG T+R+ KNLR+C DCH + S++ REI+VRDN RFH
Sbjct: 620 TLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFH 679
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 680 CFRDGSCSCNDYW 692
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 36 SISLYCSMRREGIGPVSFTLSALFKACTEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTM 94
++ L+C + P T K+ + + + G+Q+HA+++ L T+ +V ++
Sbjct: 105 ALRLHCLLP----NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNP-HVLTSL 159
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ +Y +CG L +++V F+E+P V+WT
Sbjct: 160 LTLYARCGLLHRAQRV-------------------------------FDEMPHPSTVSWT 188
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
A++T Y+ REA+ G+ D T V V++ACA++ + V AE
Sbjct: 189 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 248
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G +V V +A +D+Y KCG + A +F M+ ++ ++ +M+ G+A +G A+
Sbjct: 249 GIA--QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALD 306
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVG 302
LF M +P+ G L+AC+ +G
Sbjct: 307 LFLAMQAEGVRPDCYAVAGALSACTRLG 334
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ K+ W A++ GY GH ++++ L+ +M+ EG+ P + ++ ACT +
Sbjct: 274 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 333
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q + + F + +G +I MY KCG + VF +M ++D++ W +
Sbjct: 334 GALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAM 392
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ G ++A L + M+ +GV+ +
Sbjct: 393 ILGLGMTGHEKTAFTLIGQ-------------------------------MEKSGVKLND 421
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T +G++ +C G+I+ + + + P + ++D+ S+ G + +A+++
Sbjct: 422 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP--RIEHYGCIVDLLSRAGLLQEAHQL 479
Query: 245 FVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M N +++ G +H A A + +++ E +G
Sbjct: 480 IDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSG 524
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V ++L+ +Y++CG + A R+F M + S++++I + G A+ + +
Sbjct: 151 TNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNA 210
Query: 280 VKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACMVDLLGRAGCL 328
+P+ T + VLTAC+ V + G++ S VDL + G +
Sbjct: 211 FANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEM 270
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+A ++ +KM + + WGA++G + +P A
Sbjct: 271 AKAREVFDKMR-DKDAVAWGAMVGGYASNGHPREA 304
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/570 (40%), Positives = 342/570 (60%), Gaps = 33/570 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISL---YCSMRREGIGPVSFTLSALFKACTE 64
+F Q+ +N F W +IRG+ K I++ Y M E + P FT ++ KAC +
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERD----- 118
+ G+QIH L GF D +V + ++ MYV CGF+ +R +F + E+D
Sbjct: 141 TGKIQEGKQIHGLA-LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 199
Query: 119 --------VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
+V W +I Y GD ++A LF+++ + V+W M++GY N ++A+
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
E F M+ + +YVTLV V+ A ++LG ++ W+ AE SG I++V+ GSALID
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI-RIDDVL-GSALID 317
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG I+ A +F + + NV ++S+MI GFA+HG+A AI F M + +P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+I +LTACSH GL G+ P +HY CMVDLLGR+G L+EA + + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P++P+ +W ALLGAC++ N E+ + AN L ++ P G Y+ LSN+YAS G W +VS
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
+R +K ++K+PG S ++ D GV+HEF D +HP + EI L ++ D+L+ GY+
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDID-GVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P VL ++ +E+K+ +L HSEK+A AFGL++TSPG +RI+KNLRICEDCH +
Sbjct: 557 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 616
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+V R+I VRD RFHHFQDG CSC +YW
Sbjct: 617 SKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 66/304 (21%)
Query: 117 RDVVSWTELIVAYANNG----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE- 171
RD ++ E++ A + D++ A +FN++P ++ +W ++ G+ ++ + + I
Sbjct: 53 RDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAI 112
Query: 172 --YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
++E M VE + T V+ ACA+ G I+ + +A GFG + V S L+
Sbjct: 113 TLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG--GDEFVMSNLV 170
Query: 230 DMYSKCGSIDDA----YR-----------------------------------------I 244
MY CG + DA Y+ +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F M+QR+V S+++MI G++++G A+++F +M K + +PN VT + VL A S +G
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 303 -----LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
L Y G+ + ++D+ + G +E+A+ + E++P E N W A++
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMING 349
Query: 354 CQIH 357
IH
Sbjct: 350 FAIH 353
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F++++ ++ W +I GY L G KD++ ++ M++ I P TL ++ A + +
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ +H G D +G+ +I MY KCG + + VF+ +P +V++W
Sbjct: 288 GSLELGEWLHLYA-EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITW--- 343
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+AM+ G+ + + +AI+ F +M+ AGV
Sbjct: 344 ----------------------------SAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V + +++AC+ G+++ + ++ G P + ++D+ + G +D+A
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP--RIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 245 FVGM 248
+ M
Sbjct: 434 ILNM 437
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 338/592 (57%), Gaps = 53/592 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN + +IR Y+ D++ ++ +M GI P +T + KA +
Sbjct: 91 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 150
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ +G QIHA + +G +++VGN +I MY KCG L + +V D+MP RDVVSW L
Sbjct: 151 EDLWVGMQIHAAVVRVG-LDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSL 209
Query: 126 IVAYANNGDMESA-------------------------------------GGLFNELPLK 148
+ A NG + A +F +L K
Sbjct: 210 VAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANK 269
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M+ Y+ N+ P EA++ F +M+ V+ D +++ V+ AC L + +
Sbjct: 270 SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIH 329
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E P N+++ +ALIDMY+KCG ++ A +F MK R+V S++SMI + M+G+
Sbjct: 330 EYVVRKRLQP--NLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGK 387
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDHYA 316
A+ LF M P+ + F+ VL+ACSH GL G + P +H+
Sbjct: 388 GRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 447
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLLGRAG ++EA +++MP+EPN VWGALL AC+++ N I +AA+ LF+L P+
Sbjct: 448 CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPE 507
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W+DV+ VR ++K G+KK PG S E D V H F AGD +HP
Sbjct: 508 QSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRV-HTFLAGDQSHP 566
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
S +I + L + +++ GY P S L+DV +E+K+ L HSEKLA+AF +L T+PG
Sbjct: 567 QSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPG 626
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ +RI KNLR+C DCH+ S+++GREI +RD RFHHF +G CSCG+YW
Sbjct: 627 SPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 54/287 (18%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
SF + +F ++ K+ W +I Y+ +++ ++ M + P + +++++ AC
Sbjct: 257 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG++IH + ++ +L + N +I MY KCG L +R+VFD+M RDVVSW
Sbjct: 317 GDLSALLLGRRIH-EYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 375
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I AY NG K R+A+ F RMQ G+
Sbjct: 376 TSMISAYGMNG-------------------------------KGRDAVSLFSRMQDLGLN 404
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGP-INNVVVGSALIDMYSKCGSIDD 240
D + V V+SAC+ G++ + ++ E P I + V ++D+ + G +D+
Sbjct: 405 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV---CMVDLLGRAGQVDE 461
Query: 241 AYRIFVGM---KQRNVFS--------YSSMILGFAMHGRAHAAIQLF 276
AY M V+ YS+MI+G AA QLF
Sbjct: 462 AYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL------AADQLF 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ AYA G+ S +F+E+P K+ V + M+ YV N +A+ F+ M G++
Sbjct: 76 KLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDP 135
Query: 184 DYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ T V+ A + +G+ +A V G NV VG+ LI MY KCG +
Sbjct: 136 DHYTYPCVLKASSGSEDLWVGMQIHAAVV-------RVGLDLNVFVGNGLISMYGKCGCL 188
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A R+ M R+V S++S++ G A +G+ A+++ +M KP+ T +L A
Sbjct: 189 VEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV 248
Query: 299 SHVGL 303
++ L
Sbjct: 249 TNTCL 253
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+N +G L+ Y+ CG IF + ++NV ++ MI + + A+ +F +M
Sbjct: 69 SNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM 128
Query: 280 VKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCL 328
P+ T+ VL A S H + G+ + ++ + G+ GCL
Sbjct: 129 AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCL 188
Query: 329 EEALKMVEKMPVEPNGGVWGALLGAC 354
EA +++++MP + W +L+ C
Sbjct: 189 VEACRVLDQMPCR-DVVSWNSLVAGC 213
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/558 (38%), Positives = 330/558 (59%), Gaps = 18/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE+V K +W A+I GY+ G + ++ L+ M E + FT +++ AC
Sbjct: 248 RSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANA 307
Query: 66 LDVSLGQQIHAQ-TILLGGFTSD--LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+ +H Q T L F + L V N ++ +Y KCG + +R++FD M +DVVSW
Sbjct: 308 GFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSW 367
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y + ++ A +F E+P K++++W MV+GYV +A++ F RM+ V+
Sbjct: 368 NTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVK 427
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T G ISAC +LG +K+ + GF N+ G+ALI MY++CG++ +A
Sbjct: 428 PCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA--GNALITMYARCGAVKEAN 485
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F+ M + S+++MI HG A++LF MV P+ ++F+ VLTAC+H G
Sbjct: 486 LMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSG 545
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G+ P DHY ++DLLGRAG + EA +++ MP EP +W A+
Sbjct: 546 LVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAI 605
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ + E+ AA+ LF++ P G YI+LSN Y++AG W D +RVR+L++ G+K
Sbjct: 606 LSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 665
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E V H F GD HP + ++ + L + R++ GY P+ + VL+D+
Sbjct: 666 KEPGCSWIEAGNKV-HVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEP 724
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+K+ IL HSE+LA+ FGLL PGATV ++KNLRIC+DCH M S+ +GREIVVRD
Sbjct: 725 HQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRD 784
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG+CSCGNYW
Sbjct: 785 VRRFHHFKDGECSCGNYW 802
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 193/422 (45%), Gaps = 52/422 (12%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQQ 73
++ L A+I Y H +++++ S+ G + P ++ +AL A + ++S+
Sbjct: 119 RDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHC 178
Query: 74 IHAQ-TILLGGFTSDLYVGNTMIGMYVKCGFLGCSR---KVFDEMPERDVVSWTELIVAY 129
Q ++L G L V N ++ +Y+KC L +R KV DEMP++D ++WT ++V Y
Sbjct: 179 AQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGY 238
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
GD+ +A +F E+ +K V W AM++GYV + EA E F RM V D T
Sbjct: 239 VRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFT 298
Query: 190 GVISACAQLGVIKYANWVC-EIAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+SACA G + V +I F P + V +AL+ +YSKCG+I A RIF
Sbjct: 299 SVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDN 358
Query: 248 MKQRNVFSYSS-------------------------------MILGFAMHGRAHAAIQLF 276
MK ++V S+++ M+ G+ G + A++LF
Sbjct: 359 MKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLF 418
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRA 325
M + KP T+ G ++AC +G L G S ++ + R
Sbjct: 419 NRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARC 478
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIGNYII 383
G ++EA M MP + W A++ A H E ++ + E + PD+I +
Sbjct: 479 GAVKEANLMFLVMP-NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTV 537
Query: 384 LS 385
L+
Sbjct: 538 LT 539
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 335/559 (59%), Gaps = 17/559 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ + +F ++ P L+ +LIR +++ LY +M + G+ P T + KAC
Sbjct: 117 AYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKAC 176
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
E G +H ++ GF D Y+ +++I +Y LG ++++F+ RDVVSW
Sbjct: 177 NESSVTWFGLLVHTH-VVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 235
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I Y + +M A +F+ + +D ++W M+ GY KP EA+ F++M+ GV+
Sbjct: 236 NAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVK 295
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T+V ++SACA LG + + + N +VG+AL+DMY+KCG I A
Sbjct: 296 PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV--NSIVGTALVDMYAKCGKISLAT 353
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M+ ++V +++++I G A+HG A QLF +M + +PN +TF+ +L+ACSH G
Sbjct: 354 QVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAG 413
Query: 303 --------LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L C YG+ P +HY C++DLL RAG LEEA++++ MP+EPN GAL
Sbjct: 414 MVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGAL 473
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C+IH N E+ ++ L L+P G YI+LSNIYA+A WDD +VR L+K+ G+
Sbjct: 474 LGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 533
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVS 469
K PG S +E +G++H F AGD +HP S +I + L ++ RL+ A GY + +VL D+
Sbjct: 534 KVPGVSVIEL-KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDME 592
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+E+K+ L HSEKLA+A+GLL +RI+KNLR+C DCH + S+V GREI+VR
Sbjct: 593 EEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVR 652
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG+CSC ++W
Sbjct: 653 DRNRFHHFEDGECSCLDFW 671
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 341/559 (61%), Gaps = 20/559 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVFE + +++ WT++ Y+ G L++++ + M G P S T+S++ ACT++
Sbjct: 133 RLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL 192
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+++H ++ G +++V + ++ MY C + ++ VFD M RD VSW L
Sbjct: 193 KDLKSGREVHG-FVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
I AY N + E +F + + + +W A++ G +QN + +A+E RMQ +G
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + +T+ V+ AC L ++ + F ++ +AL+ MY+KCG ++ +
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWF--FQDLTTTTALVFMYAKCGDLELS 369
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F M +R+ S+++MI+ +MHG A+ LF +MV + +PN VTF GVL+ CSH
Sbjct: 370 RRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHS 429
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L + + V P DH++CMVD+L RAG LEEA + ++KMP+EP G WGA
Sbjct: 430 RLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGA 489
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLG C++++N E+ +IAAN LFE+E D GNY++LSNI SA +W + S R+L++ G+
Sbjct: 490 LLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGV 549
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KNPG SW++ R +H F GD ++ S EI + L + ++++ GY PN VL DV
Sbjct: 550 TKNPGCSWIQV-RNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVD 608
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EEK+ +L HSEKLA+AFG+L + +++R+ KNLRIC DCH + ++++G +I+VR
Sbjct: 609 QEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVR 668
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D++RFHHF+DG CSC ++W
Sbjct: 669 DSLRFHHFRDGLCSCQDFW 687
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R +F+++ + WT LI G ++I Y R + + P L ++ KAC
Sbjct: 31 RHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACAS 90
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV +++H I G F SD+ +GN +I MY KC +R VF+ MP RDV+SWT
Sbjct: 91 LRDVMNAKRVHEDAIRFG-FCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTS 149
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ Y N G + REA+ F +M G +
Sbjct: 150 MASCYVNCGLL-------------------------------REALGAFRKMGLNGERPN 178
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT+ ++ AC L +K V +G G NV V SAL++MY+ C SI A +
Sbjct: 179 SVTVSSILPACTDLKDLKSGREVHGFVVRNGMG--GNVFVSSALVNMYASCLSIRQAQLV 236
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M +R+ S++ +I + ++ + +FG M+ N ++ V+ C G
Sbjct: 237 FDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNG 294
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VE 182
+ I Y+N+GD++ A LF+++P D WT +++ ++ + EAI+Y+ ++ VE
Sbjct: 16 KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D + L+ V ACA L + A V E + FG ++V++G+ALIDMY KC + A
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHE--DAIRFGFCSDVLLGNALIDMYGKCRCSEGAR 133
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+F GM R+V S++SM + G A+ F M +PN VT +L AC+
Sbjct: 134 LVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/559 (39%), Positives = 330/559 (59%), Gaps = 20/559 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE+V K +W A+I GY+ G D+ L+ M E + FT +++ AC
Sbjct: 254 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 313
Query: 66 LDVSLGQQIHAQTILL-GGFTSD--LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
G+ +H Q I L F + L V N ++ +Y K G + ++++FD M +DVVSW
Sbjct: 314 GFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSW 373
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y ++G ++ A +F +P K+ ++W MV+GYV +A++ F +M+ V+
Sbjct: 374 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 433
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T G I+AC +LG +K+ + GF N+ G+AL+ MY+KCG+++DA
Sbjct: 434 PCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA--GNALLTMYAKCGAVNDAR 491
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F+ M + S+++MI HG A++LF MV P+ ++F+ +LTAC+H G
Sbjct: 492 LVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAG 551
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G+SP DHYA ++DLLGR+G + EA +++ MP EP +W A+
Sbjct: 552 LVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAI 611
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ + + E AA+ LF + P G YI+LSN Y++AG W D +RVR+L++ G+K
Sbjct: 612 LSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 671
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG SW+E G + IH F GD HP + E+ Q L + R++ GY P+ + VL+D+
Sbjct: 672 KEPGCSWIEVGSK--IHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDME 729
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EK+ IL HSEKLA+ FGLL PGATV ++KNLRIC DCH M S+ +GREIVVR
Sbjct: 730 PHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVR 789
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG+CSCGNYW
Sbjct: 790 DVRRFHHFKDGECSCGNYW 808
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 191/424 (45%), Gaps = 56/424 (13%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQ- 72
++ L A++ + ++S++ ++ G + P ++ +AL A ++ +++
Sbjct: 125 RDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC 184
Query: 73 -QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS---RKVFDEMPERDVVSWTELIVA 128
Q+H ++L G + L V N +I +Y+KC S RKV DEMP++D ++WT ++V
Sbjct: 185 TQLHC-SVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG 243
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y GD+ +A +F E+ K V W AM++GYVQ+ +A E F RM V D T
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303
Query: 189 VGVISACAQLGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+SACA G + V I F P + V +AL+ +YSK G I A RIF
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 247 GMKQRNVFSYSS-------------------------------MILGFAMHGRAHAAIQL 275
M ++V S+++ M+ G+ G + A++L
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLG 323
F M + KP T+ G + AC +G ++C G S ++ +
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC-GFEASNSAGNALLTMYA 482
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIGNY 381
+ G + +A + MP + W A++ A H E ++ + E ++PD+I
Sbjct: 483 KCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 541
Query: 382 IILS 385
IL+
Sbjct: 542 TILT 545
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/547 (41%), Positives = 333/547 (60%), Gaps = 24/547 (4%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++ G+ G +++ ++ M +G P T+S + A + DV +G Q+H I
Sbjct: 208 WNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G SD +V + M+ MY KCG + +VFDE+ E ++ S + + NG +++A
Sbjct: 268 K-QGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTAL 326
Query: 140 GLFNELPLKDK------VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
+FN+ KD+ V WT+++ QN K EA+E F MQ GVE + VT+ +I
Sbjct: 327 EVFNKF--KDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIP 384
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
AC + + + + + G ++V VGSALIDMY+KCG I A R F M N+
Sbjct: 385 ACGNISALMHGKEIHCFSLRRGI--FDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNL 442
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCY-- 306
S+++++ G+AMHG+A +++F M+++ KP+ VTF VL+AC+ GL +CY
Sbjct: 443 VSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNS 502
Query: 307 -----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
G+ P +HYAC+V LL R G LEEA ++++MP EP+ VWGALL +C++H N
Sbjct: 503 MSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLS 562
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+ +IAA LF LEP GNYI+LSNIYAS G+WD+ +R+R ++K GL+KNPGYSW+E
Sbjct: 563 LGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVG 622
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
V H AGD +HP +I + L L +++ GY P VL DV +++K++IL HS
Sbjct: 623 HKV-HMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHS 681
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+ GLL TSPG ++++KNLRIC+DCH + S++ GREI VRD RFHHF+DG
Sbjct: 682 EKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGV 741
Query: 542 CSCGNYW 548
CSCG++W
Sbjct: 742 CSCGDFW 748
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 18/310 (5%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F +++LI + H ++ + + + P +F L + K+C + + GQQ+HA
Sbjct: 70 FSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
GF +D V +++ MY+KC + +RK+FD MP+RDVV W+ +I Y+ G +E
Sbjct: 130 AAA-SGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEE 188
Query: 138 AGGLFNELPL----KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
A LF E+ + V+W M+ G+ N EA+ F M G D T+ V+
Sbjct: 189 AKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLP 248
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
A L + V G G VV SA++DMY KCG + + R+F +++ +
Sbjct: 249 AVGCLEDVVVGAQVHGYVIKQGLGSDKFVV--SAMLDMYGKCGCVKEMSRVFDEVEEMEI 306
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----------- 302
S ++ + G + +G A+++F + + N VT+ ++ +CS G
Sbjct: 307 GSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD 366
Query: 303 LKCYGVSPST 312
++ YGV P+
Sbjct: 367 MQAYGVEPNA 376
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WT++I G +++ L+ M+ G+ P + T+ +L AC + + G++IH
Sbjct: 340 NVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIH 399
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ G F D+YVG+ +I MY KCG + +R+ FD+M ++VSW
Sbjct: 400 CFSLRRGIF-DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW------------- 445
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A++ GY + K +E +E F M +G + D VT V+SAC
Sbjct: 446 ------------------NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSAC 487
Query: 196 AQLGVIKYANWVC--EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
AQ G+ + W C ++E G P + + L+ + S+ G +++AY I M
Sbjct: 488 AQNGLTE-EGWRCYNSMSEEHGIEP--KMEHYACLVTLLSRVGKLEEAYSIIKEM 539
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 123 TELIVAYANNGDMESAG---GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
T L+ YAN + + L + LP ++++++ + ++ + F +
Sbjct: 39 TSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPL 98
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ D L I +CA L + + A SGF + + +V S+L MY KC I
Sbjct: 99 RLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGF--LTDSIVASSLTHMYLKCDRIL 156
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA ++F M R+V +S+MI G++ G A +LFG+M +PN V++ G+L
Sbjct: 157 DARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFG 216
Query: 300 HVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
+ G + G P +C +L GCLE+ +
Sbjct: 217 NNGFYDEAVGMFRMMLVQGFWPDGSTVSC---VLPAVGCLEDVV 257
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/562 (39%), Positives = 345/562 (61%), Gaps = 24/562 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ W +I Y+L G +++ LY + EG T ++ AC+ V
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV 321
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ +H+ IL G S++ V ++ MY KCG L +RKVF+ M RD V+W+ L
Sbjct: 322 KALAQGRLVHSH-ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380
Query: 126 IVAYANNG---DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGV 181
I AYA+NG D A +F+ L +D ++W AM+T YVQN A++ F M AG+
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGL 440
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT + V+ ACA LG + + +I+E +NVVV + LI+MY++CGS+++
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISESE---LESNVVVTNTLINMYARCGSLEE 497
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F K++ V S+++M+ F+ +GR A+ LF +M KP+ VT+ +L C+H
Sbjct: 498 AERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTH 557
Query: 301 VG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G + + ++P+ DH+A MVDLLGR+G L +A +++E MP EP+ W
Sbjct: 558 GGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWM 617
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
L AC+IH E+ + AA ++EL+P YI +SNIYA+ GMW+ V+ VR+ ++ G
Sbjct: 618 TFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERG 677
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK PG S++E D G +HEF +G HP + EI + L L ++A GY P+ ++VL+DV
Sbjct: 678 LKKLPGLSFIEVD-GKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDV 736
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTS-PGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
S+ EK+ +L+ HSEK+A+AFGL+++ G +R++KNLR+C DCH +++ GR+I+
Sbjct: 737 SEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDII 796
Query: 528 VRDNMRFHHF-QDGKCSCGNYW 548
VRD RFH F DGKCSCG+YW
Sbjct: 797 VRDCNRFHRFSSDGKCSCGDYW 818
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 52/361 (14%)
Query: 6 RLVFEQVKYK--NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE + ++ N W A+I Y GH +++ LY M +G+G T ++ AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ G++IH + + G S + N ++ MY + G +G ++++F + RD SW
Sbjct: 122 ---SLAQGREIHNR-VFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+A++ +GD A +F E+ + KP
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKC---------------DVKP----------------- 205
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T + VIS + V+ + +GF ++VV +ALI+MY KCGS +A
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD--TDLVVATALINMYGKCGSSHEARE 263
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
+F MK+R++ S++ MI + ++G H A++L+ + K TF+ +L ACS
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H + G+ +V++ + G LEEA K+ M + W L+G
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIG 382
Query: 353 A 353
A
Sbjct: 383 A 383
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 86/428 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+ ++ ++ W A+I + G ++ ++ M+ + + P S T + +
Sbjct: 162 KRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTP 220
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IHA+ I+ GF +DL V +I MY KCG +R+VFD+M +RD+VSW +
Sbjct: 221 EVLPEGRKIHAE-IVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVM 279
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y NGD EA+E ++++ G +
Sbjct: 280 IGCYVLNGDFH-------------------------------EALELYQKLDMEGFKRTK 308
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V ++ AC+ + + V I E G + V V +AL++MY+KCGS+++A ++
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILER---GLDSEVAVATALVNMYAKCGSLEEARKV 365
Query: 245 FVGMKQRNVFSYSSMILGFAMHGR----------------------------------AH 270
F MK R+ ++S++I +A +G A
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAV 425
Query: 271 AAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG----LKCYGVSPSTDHYA-------CM 318
AA+++F +M KP+ VTFI VL AC+ +G +K S +
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFE-LEPD 376
+++ R G LEEA ++ E W A++ A Q R E + E ++PD
Sbjct: 486 INMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Query: 377 KIGNYIIL 384
+ IL
Sbjct: 545 DVTYTSIL 552
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 50/315 (15%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + T + +C+ DV G+ +H + I F D VGN +I MY KC L +R
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALH-ERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VF+ M R ++ V+W AM+ Y QN EA
Sbjct: 64 VFESMDWRQ-----------------------------RNVVSWNAMIAAYAQNGHSTEA 94
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV-VVGSAL 228
+ + RM G+ TD+VT V V+ AC+ L + EI + +++ + +AL
Sbjct: 95 LVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGR------EIHNRVFYSGLDSFQSLANAL 148
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ MY++ GS+ DA R+F ++ R+ S++++IL + G A+++F +M K + KPN
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNS 207
Query: 289 VTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
T+I V++ S H + G ++++ G+ G EA ++ +K
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 338 MPVEPNGGVWGALLG 352
M + + W ++G
Sbjct: 268 MK-KRDMVSWNVMIG 281
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/560 (41%), Positives = 345/560 (61%), Gaps = 29/560 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+++ ++ W A+ Y + K++++L+ M EGI P T +C+ +
Sbjct: 212 RRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSI 271
Query: 66 LDVSLG----QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVV 120
D +L + I + I+L F V ++ M+ K G L +R +FDE+ +R+ V
Sbjct: 272 GDPTLADSILRMIDQKHIVLNSF-----VKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYA 179
+W +I AY G + A LF+ +P +D V+W +M+ GY QN + +IE F+ M
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKC 235
++ D VT+ V+SAC +G +K + WV +I N+ +G ++LI MYSKC
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE------KNIKLGISGFNSLIFMYSKC 440
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS+ DA+RIF M R+V S++++I GFA +G AI+L M + +P+ VT+IGVL
Sbjct: 441 GSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVL 500
Query: 296 TACSHVGLKCYGV-------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
TACSH GL G +P+ DHYACMVDLLGRAG L+EA +++ MP++P+ GV+G
Sbjct: 501 TACSHAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LL A +IH+ + ++AA+ LFELEP +GNY++LSNIYAS G W+DV RVR ++K G
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK+ G SW+E +G +H+F GD +H S +I + L +L +++ G+ + L DV
Sbjct: 621 LKKSVGMSWVEY-KGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDV 679
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK+ +L THSEKLA+ F LL + G T+R++KNLRIC DCH + S++ GREIVV
Sbjct: 680 EEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVV 739
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDN RFH F +G CSC +YW
Sbjct: 740 RDNNRFHCFSEGMCSCHDYW 759
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 68/357 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + +++ +++ Y G +SL+ + P F L K L
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LA 110
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM------------- 114
G HA + LG D ++ N ++ MY K G + +R +F++M
Sbjct: 111 GKSGNMFHAYVLKLGHI-DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 115 ------------------PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
P R++++WT ++ YA GD+ESA F+E+P + V+W AM
Sbjct: 170 GCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV--------- 207
+ Y Q P+EA+ F +M G+ D T V IS+C+ +G A+ +
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 208 -------------------CEIAEG--SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
EIA G N V + +I Y++ G + A +F
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVG 302
M +R+V S++SMI G+A +G + +I+LF +M+ + +P+ VT VL+AC H+G
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIG 406
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 118/277 (42%), Gaps = 58/277 (20%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKA 61
S R +F+ + ++ W ++I GY G SI L+ M I P T++++ A
Sbjct: 342 SLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSA 401
Query: 62 CTEVLDVSLG----QQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
C + + L + + I LG GF N++I MY KCG + + ++F M
Sbjct: 402 CGHIGALKLSYWVLDIVREKNIKLGISGF-------NSLIFMYSKCGSVADAHRIFQTMG 454
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
RDVVS+ LI +A NG +EAI+
Sbjct: 455 TRDVVSFNTLISGFAANG-------------------------------HGKEAIKLVLT 483
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG-FGPINNVVVG--SALIDMY 232
M+ G+E D+VT +GV++AC+ G++ EG F I V + ++D+
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLN---------EGKNVFKSIQAPTVDHYACMVDLL 534
Query: 233 SKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGR 268
+ G +D+A + M + + Y S++ +H R
Sbjct: 535 GRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 329/544 (60%), Gaps = 42/544 (7%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +I Y + ++++++Y +R+ +F ++ KAC +V LG++IH +
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG-FV 185
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW----TELIVAYANNGDM 135
L G D++VGN ++ MY +C + +R VFD+M ERDVVSW T L+ YA G +
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A LFN L K V+WTAM+ G +++ + E + F RMQ + + +T++
Sbjct: 246 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNK---- 301
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
E E + ++ +AL+DMY+KCG I+ A R+F+ R++
Sbjct: 302 -------------ERVEV-------DCILNTALVDMYAKCGDINAAGRLFIEAISRDICM 341
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------ 303
++++I GFAMHG A+ +F +M + KPN +TFIG+L ACSH GL
Sbjct: 342 WNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 401
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+G+ P +HY CMVDLLGRAG L+EA +M++ MP++PN VWGAL+ AC++H+NP++
Sbjct: 402 HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLG 461
Query: 364 QIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRG 423
++AA L E+EP+ G +++SNIYA+A W D + VR+ +K G+KK PG+S +E + G
Sbjct: 462 ELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVN-G 520
Query: 424 VIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEK 483
+HEF GD +HP I + L ++ +L GY P+ +VL ++ +EEK+ L HSEK
Sbjct: 521 TVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEK 580
Query: 484 LALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
LA+AFGL++T+P +RI+KNLR+C DCH S++ GR I+VRD RFHHF++G CS
Sbjct: 581 LAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCS 640
Query: 544 CGNY 547
CG+Y
Sbjct: 641 CGDY 644
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL E + ++ +W A+I G+ + G+ ++++ ++ M R+G+ P T L AC+
Sbjct: 329 RLFIEAIS-RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 387
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G+++ + + G + M+ + + G L + ++ MP + + + W
Sbjct: 388 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 447
Query: 125 LIVA 128
L+ A
Sbjct: 448 LVAA 451
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/560 (41%), Positives = 345/560 (61%), Gaps = 29/560 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+++ ++ W A+ Y + K++++L+ M EGI P T +C+ +
Sbjct: 212 RRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSI 271
Query: 66 LDVSLG----QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVV 120
D +L + I + I+L F V ++ M+ K G L +R +FDE+ +R+ V
Sbjct: 272 GDPTLADSILRMIDQKHIVLNSF-----VKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYA 179
+W +I AY G + A LF+ +P +D V+W +M+ GY QN + +IE F+ M
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKC 235
++ D VT+ V+SAC +G +K + WV +I N+ +G ++LI MYSKC
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE------KNIKLGISGFNSLIFMYSKC 440
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS+ DA+RIF M R+V S++++I GFA +G AI+L M + +P+ VT+IGVL
Sbjct: 441 GSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVL 500
Query: 296 TACSHVGLKCYGV-------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
TACSH GL G +P+ DHYACMVDLLGRAG L+EA +++ MP++P+ GV+G
Sbjct: 501 TACSHAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LL A +IH+ + ++AA+ LFELEP +GNY++LSNIYAS G W+DV RVR ++K G
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK+ G SW+E +G +H+F GD +H S +I + L +L +++ G+ + L DV
Sbjct: 621 LKKSVGMSWVEY-KGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDV 679
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK+ +L THSEKLA+ F LL + G T+R++KNLRIC DCH + S++ GREIVV
Sbjct: 680 EEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVV 739
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDN RFH F +G CSC +YW
Sbjct: 740 RDNNRFHCFSEGMCSCHDYW 759
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 68/357 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + +++ +++ Y G +SL+ + P F L K L
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LA 110
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM------------- 114
G HA + LG D ++ N ++ MY K G + +R +F++M
Sbjct: 111 GKSGNLFHAYVLKLGHI-DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 115 ------------------PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
P R++++WT ++ YA GD+ESA F+E+P + V+W AM
Sbjct: 170 GCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV--------- 207
+ Y Q P+EA+ F +M G+ D T V IS+C+ +G A+ +
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 208 -------------------CEIAEG--SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
EIA G N V + +I Y++ G + A +F
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVG 302
M +R+V S++SMI G+A +G + +I+LF +M+ + +P+ VT VL+AC H+G
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIG 406
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 118/277 (42%), Gaps = 58/277 (20%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKA 61
S R +F+ + ++ W ++I GY G SI L+ M I P T++++ A
Sbjct: 342 SLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSA 401
Query: 62 CTEVLDVSLG----QQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
C + + L + + I LG GF N++I MY KCG + + ++F M
Sbjct: 402 CGHIGALKLSYWVLDIVREKNIKLGISGF-------NSLIFMYSKCGSVADAHRIFQTMG 454
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
RDVVS+ LI +A NG +EAI+
Sbjct: 455 TRDVVSFNTLISGFAANG-------------------------------HGKEAIKLVLT 483
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG-FGPINNVVVG--SALIDMY 232
M+ G+E D+VT +GV++AC+ G++ EG F I V + ++D+
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLN---------EGKNVFKSIQAPTVDHYACMVDLL 534
Query: 233 SKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGR 268
+ G +D+A + M + + Y S++ +H R
Sbjct: 535 GRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 344/562 (61%), Gaps = 20/562 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ + +F ++ +N + W ++I GY G ++++ L+ M+ GI P F+LS++ +C
Sbjct: 531 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D G+++H I+ + + ++ MY KCG + + KV+D+ ++DV+
Sbjct: 591 VSLSDSQKGRELH-NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILN 649
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ A+ N+G A LF+++ ++ W +++ GY +E+ +F M + +E
Sbjct: 650 NVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDA 241
D +T+V +++ C+ L +++ + + + GF +N +VV+ +AL+DMYSKCG+I A
Sbjct: 710 YDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGF--VNCSVVLETALVDMYSKCGAITKA 767
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M +N+ S+++MI G++ HG + A+ L+ +M K PN VTF+ +L+ACSH
Sbjct: 768 RTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHT 827
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + Y + +HY CMVDLLGRAG LE+A + VEKMP+EP WGA
Sbjct: 828 GLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGA 887
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC++H++ ++ ++AA LFEL+P G Y+I+SNIYA+AG W +V +R+++KM G+
Sbjct: 888 LLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGV 947
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK+PG SW+E + I F AG THP + EI L L + + GY P+ +L +V
Sbjct: 948 KKDPGVSWIEIN-SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVK 1006
Query: 470 D---EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D EE++ L+ HSE+LAL+ GL++ +T+R+ KNLRIC DCH S++ GR I
Sbjct: 1007 DIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRI 1066
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+ RD RFHHF++GKCSCG+YW
Sbjct: 1067 IARDTNRFHHFENGKCSCGDYW 1088
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 166/349 (47%), Gaps = 49/349 (14%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A+I GY+ +++ ++ M + G+ P +FT ++ + C + G+Q+H++ I
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G F D +VGN +I MY KC D ES
Sbjct: 304 ACG-FKGDTFVGNALIDMYAKCD-------------------------------DEESCL 331
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+E+ +++V W ++++ Q +A+ F RMQ +G +++ L ++ A A L
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391
Query: 200 VIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
I E+ +N ++++GSAL+DMYSKCG +++A+++F + +RN SY++
Sbjct: 392 DIGKGR---ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNA 448
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS-----------HVGLKCY 306
++ G+ G+A A++L+ DM + +P+ TF +LT C+ H L
Sbjct: 449 LLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 508
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
++ + +V + G L A ++ +M E N W +++ Q
Sbjct: 509 NITKNIIVETELVHMYSECGRLNYAKEIFNRM-AERNAYSWNSMIEGYQ 556
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 37/293 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N W ++I GH D++ L+ M+ G F L ++ A + D
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H ++ SD+ +G+ ++ MY KCG +
Sbjct: 393 IGKGRELHGH-LVRNLLNSDIILGSALVDMYSKCGMV----------------------- 428
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYV 186
E A +F L +++V++ A++ GYVQ K EA+E + MQ G++ D
Sbjct: 429 --------EEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQF 480
Query: 187 TLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++ CA + N +I A N++V + L+ MYS+CG ++ A IF
Sbjct: 481 TFTTLLTLCANQ---RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
M +RN +S++SMI G+ +G A++LF M KP+ + +L++C
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 53/319 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
VF + +N + AL+ GY+ +G ++++ LY M+ E GI P FT + L C
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ + G+QIHA ++ T ++ V ++ MY +C
Sbjct: 494 NDNQGRQIHAH-LIRANITKNIIVETELVHMYSEC------------------------- 527
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G + A +FN + ++ +W +M+ GY QN + +EA+ F++MQ G++ D
Sbjct: 528 ------GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581
Query: 187 TLVGVISAC-----AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+L ++S+C +Q G + V E G ++ L+DMY+KCGS+D A
Sbjct: 582 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG-------ILQVVLVDMYAKCGSMDYA 634
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++++ +++V + M+ F GRA+ A LF M + N + +L ++
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM----EQRNTALWNSILAGYANK 690
Query: 302 GLKCYGVSPSTDHYACMVD 320
GLK S +H+ M++
Sbjct: 691 GLK----KESFNHFLEMLE 705
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 53/321 (16%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P+ + S+L + C + G+ IH Q I G+ D Y+ ++ +Y + G L
Sbjct: 69 VNPLPY--SSLIQDCIDSNSFQRGKSIHTQMIS-NGYNPDAYLMTKILMLYARSGCLD-- 123
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
D+ A LF E+P ++ AW M+ Y +
Sbjct: 124 --------------------------DLCYARKLFEEMPERNLTAWNTMILAYARVDDYM 157
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQL----GVIKYANWVCEIAEGSGFGPINNVV 223
E + + RM+ +G +D T VI AC + GV + + V + G N+
Sbjct: 158 EVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKA------GLNCNLF 211
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
VG AL+D Y++ G +DDA ++ +V +++++I G+ A +F M+K
Sbjct: 212 VGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG 271
Query: 284 TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEAL 332
P+ TF L C + + G + AC ++D+ + E L
Sbjct: 272 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 331
Query: 333 KMVEKMPVEPNGGVWGALLGA 353
K+ ++M E N W +++ A
Sbjct: 332 KVFDEMG-ERNQVTWNSIISA 351
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/529 (41%), Positives = 329/529 (62%), Gaps = 25/529 (4%)
Query: 42 SMRREGIGPVSFTLSAL---FKACTEVLDVSL-------GQQIHAQTILLGGFTSDLYVG 91
+MR G+G S AL F A + +L G+ A+ D+++
Sbjct: 50 AMRDLGLGAASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLC 109
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N M+ YV G + +R+VFD M ERD+VSW +I YA NG+++ A +FN + +D
Sbjct: 110 NVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAF 169
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W++M++ Y + + ++A+E + M+ A V D T+V V+SAC+ +G + V +
Sbjct: 170 SWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFV 229
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E +G +V +G+ALIDMY+KCG I+++ R+F M ++V ++SSMI+G A HG H
Sbjct: 230 ESNGVEL--DVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHD 287
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMV 319
A+ LF M+ +PN VTFIGVL +C+H+GL +GV+P HY CMV
Sbjct: 288 ALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMV 347
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
DLLGR+G +EEA +++ MP EP+ +W ALLGAC+I++N E+A+ A L L+P G
Sbjct: 348 DLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADG 407
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
+Y++LSNIYA A W+ V+ +RR L+ +++ PG S +E + IHEF +GD +HP S
Sbjct: 408 HYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEW-QNTIHEFISGDRSHPRSK 466
Query: 440 EIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
EI + LG+++DRL+ GY+P VL D+ ++ K+R L HSEKLA+AFGLLTT G+T+
Sbjct: 467 EIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTL 526
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
RI KNLR CEDCH + + + R++++RD RFHHF +G+CSC +YW
Sbjct: 527 RITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF + ++ F W++++ Y KD++ L+ MR + P T+ ++ AC+
Sbjct: 155 LAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACS 214
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +++G ++H Q + G D+ +G +I MY KCG + S +VF MP +DV++W+
Sbjct: 215 DMGALAVGAEVH-QFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWS 273
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+ AN+G F +A+ F RM G++
Sbjct: 274 SMIIGLANHG--------FGH-----------------------DALSLFSRMLSEGLQP 302
Query: 184 DYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT +GV+ +C LG++ + ++ G P V ++D+ + G I++A
Sbjct: 303 NEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTP--KVQHYGCMVDLLGRSGHIEEAK 360
Query: 243 RIFVGM 248
++ M
Sbjct: 361 QLIRDM 366
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ W+++I G G D++SL+ M EG+ P T + +CT +
Sbjct: 260 VFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
VS G++ + ++ G T + M+ + + G + ++++ +MP E D V W L+
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALL 379
Query: 127 VA 128
A
Sbjct: 380 GA 381
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 337/553 (60%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + N +L+T+LI G++ G D+I+L+C M R+ + ++ ++A+ KAC
Sbjct: 81 LFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRA 140
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H +L G D + ++ +Y KCG L +RK+FD MPERDVV+ T +I
Sbjct: 141 LGSGKEVHG-LVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIG 199
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ + G +E A +FNE+ +D V WT ++ G V+N + +E F MQ GVE + VT
Sbjct: 200 SCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVT 259
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V V+SACAQLG ++ W+ G +N V G ALI+MYS+CG ID+A +F G
Sbjct: 260 FVCVLSACAQLGALELGRWIHAYMRKCGV-EVNRFVAG-ALINMYSRCGDIDEAQALFDG 317
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
++ ++V +Y+SMI G A+HG++ A++LF +M+K +PNG+TF+GVL ACSH GL
Sbjct: 318 VRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLG 377
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+G+ P +HY CMVD+LGR G LEEA + +M VE + + +LL AC+
Sbjct: 378 GEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACK 437
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N + + A L E G++I+LSN YAS G W + VR ++ G+ K PG
Sbjct: 438 IHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGC 497
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + IHEF +GDL HP I + L +L + +GY P L+D+ DE+K+
Sbjct: 498 SSIEVNNA-IHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKEL 556
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LA+ +GL++T T+R+ KNLRIC+DCH + +++ R+IVVRD RFH
Sbjct: 557 ALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFH 616
Query: 536 HFQDGKCSCGNYW 548
HF++G+CSC +YW
Sbjct: 617 HFENGECSCKDYW 629
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 155/342 (45%), Gaps = 28/342 (8%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
Q IH I + D +V ++ +Y K ++ + K+F +V +T LI + +
Sbjct: 44 QSIHCHAIKTRT-SQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVS 102
Query: 132 NGDMESAGGLFNEL----PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G A LF ++ L D A TAM+ V E + +G+ D
Sbjct: 103 FGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSI 162
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ + GV++ A ++ +G P +VV + +I CG +++A +F
Sbjct: 163 ALKLVELYGKCGVLEDAR---KMFDGM---PERDVVACTVMIGSCFDCGMVEEAIEVFNE 216
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+ ++ +I G +G + +++F +M +PN VTF+ VL+AC+ +G
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELG 276
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
KC GV + ++++ R G ++EA + + + V+ + + +++G
Sbjct: 277 RWIHAYMRKC-GVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGLA 334
Query: 356 IH-RNPEIAQIAANHLFE-LEPDKIGNYIILSNIYASAGMWD 395
+H ++ E ++ + L E + P+ I ++ + N + G+ D
Sbjct: 335 LHGKSIEAVELFSEMLKERVRPNGI-TFVGVLNACSHGGLVD 375
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/626 (37%), Positives = 349/626 (55%), Gaps = 85/626 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF++ + FLW A+IRGY D+I +Y M+ G+ P FTL + KAC+
Sbjct: 121 YARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACS 180
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGN------------------------------- 92
V + +G+++H Q LG F SD++V N
Sbjct: 181 GVPVLEVGKRVHGQIFRLG-FESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWT 239
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDV----VSWTELIVAYANNGDMES----------- 137
+MI Y + G + ++F +M +R+V ++ ++ AY + D+E
Sbjct: 240 SMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKM 299
Query: 138 ------------------------AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
A F+++ + + + W AM++GY +N EA+ F
Sbjct: 300 GLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLF 359
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+ M + TD +T+ I ACAQ+G + A W+ + + + N+V V +ALIDM++
Sbjct: 360 QEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR--NDVFVNTALIDMFA 417
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCGS+D A +F ++V +S+MI+G+ +HGR AI LF M + PN VTF+G
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVG 477
Query: 294 VLTACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
+LTAC+H GL K YG+ HYAC+VDLLGR+G L EA + MP+EP
Sbjct: 478 LLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEP 537
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
VWGALLGAC+I+R+ + + AA LF L+P G+Y+ LSN+YAS+ +WD V++VR
Sbjct: 538 GVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRI 597
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
L++ GL K+ GYS +E + G + FR GD +HP EI + L L RL+ G+ P++
Sbjct: 598 LMREKGLSKDLGYSLIEIN-GKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIE 656
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
SVL+D++ EEK+ L HSE+LA+A+GL++T+PG T+RI KNLR C +CH S+++
Sbjct: 657 SVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLV 716
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
REIVVRD RFHHF++G CSC +YW
Sbjct: 717 NREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
QIHAQ ++ G S V + G +G +RKVFDE PE V
Sbjct: 88 NQIHAQLVVSGLVESGFLV-TKFVNASWNIGEIGYARKVFDEFPEPSV------------ 134
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
W A++ GY + +AIE + RMQ +GV D TL V
Sbjct: 135 -------------------FLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCV 175
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ AC+ + V++ V GF ++V V + L+ +Y+KCG ++ A +F G+ R
Sbjct: 176 LKACSGVPVLEVGKRVHGQIFRLGFE--SDVFVQNGLVALYAKCGRVEQARIVFEGLDDR 233
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------H 300
N+ S++SMI G+ +G A+++FG M + KP+ + + VL A + H
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIH 293
Query: 301 VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ G+ D + + + G + A ++M + PN +W A++
Sbjct: 294 GCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI-PNVMMWNAMI 343
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/557 (39%), Positives = 327/557 (58%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ +N WTA+I GY +G+ +++ L+ M G P FT + + +CT
Sbjct: 65 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+QIH+ ++ F S ++VG++++ MY K G + +R+VF
Sbjct: 125 SGFQLGRQIHS-LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF-------------- 169
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ LP +D V+ TA+++GY Q EA++ F R+Q G+ ++Y
Sbjct: 170 -----------------DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 212
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V++A + L + + V + P VV+ ++LIDMYSKCGS+ + RIF
Sbjct: 213 VTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFY-VVLQNSLIDMYSKCGSLTYSRRIF 270
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLK 304
M +R V S+++M++G++ HG A++LF M + + KP+ VTF+ VL+ CSH G++
Sbjct: 271 DSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 330
Query: 305 CYGVS-------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G+ P +HY C+VDL GRAG +EEA + ++KMP EP +WG+LL
Sbjct: 331 DRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 390
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H+N I + A L E+E + GNY+ILSN+YASAG WDDV VR L+K + K
Sbjct: 391 GACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIK 450
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D+ +H F A D +HP E+ + +L +++ GY P L VLYDV DE
Sbjct: 451 EPGRSWIELDQ-TLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDE 509
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K++IL HSEKLALAFGL+ T G VRI+KNLRIC DCH F S+V GRE+ +RD
Sbjct: 510 QKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDK 569
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHH G CSCG+YW
Sbjct: 570 NRFHHIVGGTCSCGDYW 586
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M G+E ++ V++ C I+ V + + P V + + LI +Y+KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEP--PVYLRTRLIVLYNKC 58
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+ DA R+ M +RNV S+++MI G++ G A A+ LF +M+ + T PN TF VL
Sbjct: 59 RCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 118
Query: 296 TACS-----HVGLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMP 339
T+C+ +G + + + T + ++D+ +AG + EA ++ + +P
Sbjct: 119 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 336/544 (61%), Gaps = 26/544 (4%)
Query: 21 TALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTIL 80
+ ++ Y G + S+S++ GIG FT + K+ E+L V +G+ +H IL
Sbjct: 109 SKMVAFYASSGDIDSSVSVF-----NGIGDY-FTFPFVLKSSVELLSVWMGKCVHG-LIL 161
Query: 81 LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGG 140
G DLYV ++I +Y KCG + + KVFD M RDV SW L+ Y +G +++A
Sbjct: 162 RIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALA 221
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM--QYAGVETDYVTLVGVISACAQL 198
+F +P ++ V+WT M++GY Q+ ++A+ F+ M + +GV ++VT++ V+ ACAQL
Sbjct: 222 IFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQL 281
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSY 256
++ + E+A G +N V AL MY+KCGS+ DA F + ++N+ ++
Sbjct: 282 STLERGRQIHELACRMGLN--SNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAW 339
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLK------- 304
++MI +A +G A+ F +M++ +P+ +TF G+L+ CSH VGLK
Sbjct: 340 NTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMST 399
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
Y ++P +HYAC+ DLLGRAG L EA K+V +MP+ +WG+LL AC+ HRN E+A+
Sbjct: 400 TYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAE 459
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AA LF LEP+ GNY++LSN+YA AG W +V ++R ++K G KK+PG SW+E + G
Sbjct: 460 TAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEIN-GK 518
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
H F GD +HP EI L L ++++A GY P+ VL+D+S+EEK+ L+ HSEKL
Sbjct: 519 AHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKL 578
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+AFG+L T +R+ KNLRIC DCH M S++ GRE++VRD RFHHF+ G CSC
Sbjct: 579 AVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSC 638
Query: 545 GNYW 548
G+YW
Sbjct: 639 GDYW 642
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 40/206 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACTEV 65
+FE++ ++N WT +I GY G + ++SL+ M +E G+ P T+ ++ AC ++
Sbjct: 222 IFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQL 281
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM--PERDVVSWT 123
+ G+QIH + G S+ V + MY KCG L +R FD++ E+++++W
Sbjct: 282 STLERGRQIHELACRM-GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 340
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I AYA+ G GL +A+ F M AG++
Sbjct: 341 TMITAYASYGH-----GL--------------------------QAVSTFREMIQAGIQP 369
Query: 184 DYVTLVGVISACAQLGVI----KYAN 205
D +T G++S C+ G++ KY N
Sbjct: 370 DDITFTGLLSGCSHSGLVDVGLKYFN 395
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 340/563 (60%), Gaps = 24/563 (4%)
Query: 6 RLVFEQVKYKNP--FLWTALIRGYILQGHLKDSISLYCSMRR----EGIGPVSFTLSALF 59
R++F+ +P LW +IR Y + ++ I L+ M + P +T + +
Sbjct: 126 RILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVI 185
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
+C+ + + G+ +H ++ GF S+LYVGN++I M + +RKVF++M ERDV
Sbjct: 186 TSCSHQISLIYGEIVHGM-VVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDV 244
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
SWT L+ YA +G+M+ A LFN +P+++ V+W M++G++ + EA+ +F M
Sbjct: 245 FSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCD 304
Query: 180 G-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V + LV V+SACA LG + NW+ + G +N+ +ALIDMY+KCG I
Sbjct: 305 DRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNI--STALIDMYAKCGRI 362
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D A R+F G+ +R+V S++SMI G + HG A+++F M+ PN +T +GVL C
Sbjct: 363 DCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGC 422
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL +G++P +HY C +DLLGRAG LE AL++V+ MP+EP+ +
Sbjct: 423 SHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVI 482
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
W ALL A +IH N + + +H+ +L+ D G ++LSN+YAS G W+ V+ +R+L+
Sbjct: 483 WRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMV 542
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
+ +PG SW+E + G++HEFR D HP EI+ L ++L RL GY N V
Sbjct: 543 DRRSESSPGCSWIEVN-GLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVS 601
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+D+++EEK++ + HSEKLA+AFGL++T PG +RI+KNLR CEDCH + SQV GRE
Sbjct: 602 FDLNEEEKEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGRE 661
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFH F +G CSC ++W
Sbjct: 662 IVVRDRSRFHTFIEGDCSCKDFW 684
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 336/590 (56%), Gaps = 49/590 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKAC 62
+ R +F ++ + F++ LIRG +++ L+ MRR+ + P SF+ + L KA
Sbjct: 57 YARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAA 116
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ G Q+H + G S L+VG T+I MY +C L +RKVFDEM E ++V+W
Sbjct: 117 ANCRALTNGLQLHCLAVGYG-LDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAW 175
Query: 123 TELIVA-------------------------------YANNGDMESAGGLFNELPLKDKV 151
++ A Y G+++ A +F ++PLKD V
Sbjct: 176 NAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDV 235
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W+ M+ G+ N +A +F ++ G+ + V+L GV+SACAQ G ++ +
Sbjct: 236 SWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFV 295
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E SGF I + V +ALID YSKCG++D A +F M +R+ S+++MI G AMHG
Sbjct: 296 EKSGFLQI--ISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEE 353
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMV 319
AI+LF +M ++ KP+ +TFI +L ACSH GL YG+ P +HY CMV
Sbjct: 354 AIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMV 413
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
DL GRAG L++A V +MP+ PN VW LLGAC IH N +A L EL+P+ G
Sbjct: 414 DLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSG 473
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
++++LSNIYA AG W DV+ +RR + LKK PG+S +E +R +I+ F AG+ + +
Sbjct: 474 DHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNR-IIYSFVAGEKQNDIAV 532
Query: 440 EIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGAT 498
E Q L +++ RL+ + GY P + SVL+D+ EEK+ + HSEKLA+AFG+ G
Sbjct: 533 EAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRA 592
Query: 499 VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+R++KNLRIC DCH M S+V EIVVRD RFH F G CSC +YW
Sbjct: 593 IRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVL 295
S+ A R+F+ ++ +VF Y+++I G + A+QLF +M K+ P+ +F +L
Sbjct: 54 SLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLL 113
Query: 296 TACSH-------VGLKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A ++ + L C V D + ++ + CL A K+ ++M +EPN
Sbjct: 114 KAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-IEPNI 172
Query: 345 GVWGALLGAC----------QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMW 394
W A++ AC Q+ R I + + ++ K G + ++ +
Sbjct: 173 VAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLK 232
Query: 395 DDVS 398
DDVS
Sbjct: 233 DDVS 236
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/557 (39%), Positives = 327/557 (58%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ +N WTA+I GY +G+ +++ L+ M G P FT + + +CT
Sbjct: 532 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 591
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+QIH+ ++ F S ++VG++++ MY K G + +R+VF
Sbjct: 592 SGFQLGRQIHS-LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF-------------- 636
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ LP +D V+ TA+++GY Q EA++ F R+Q G+ ++Y
Sbjct: 637 -----------------DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V++A + L + + V + P VV+ ++LIDMYSKCGS+ + RIF
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFY-VVLQNSLIDMYSKCGSLTYSRRIF 737
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLK 304
M +R V S+++M++G++ HG A++LF M + + KP+ VTF+ VL+ CSH G++
Sbjct: 738 DSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 797
Query: 305 CYGVS-------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G+ P +HY C+VDL GRAG +EEA + ++KMP EP +WG+LL
Sbjct: 798 DRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H+N I + A L E+E + GNY+ILSN+YASAG WDDV VR L+K + K
Sbjct: 858 GACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIK 917
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D+ +H F A D +HP E+ + +L +++ GY P L VLYDV DE
Sbjct: 918 EPGRSWIELDQ-TLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDE 976
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K++IL HSEKLALAFGL+ T G VRI+KNLRIC DCH F S+V GRE+ +RD
Sbjct: 977 QKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDK 1036
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHH G CSCG+YW
Sbjct: 1037 NRFHHIVGGTCSCGDYW 1053
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
R+ E M G+E ++ V++ C I+ V + + P V + +
Sbjct: 459 RQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEP--PVYLRT 516
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
LI +Y+KC + DA R+ M +RNV S+++MI G++ G A A+ LF +M+ + T P
Sbjct: 517 RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP 576
Query: 287 NGVTFIGVLTACS-----HVGLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMV 335
N TF VLT+C+ +G + + + T + ++D+ +AG + EA ++
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636
Query: 336 EKMP 339
+ +P
Sbjct: 637 DGLP 640
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/551 (40%), Positives = 328/551 (59%), Gaps = 24/551 (4%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W +I G+ G +++ ++ M G P T+S++ A ++ D+ +G IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ G SD V + +I MY KC +VFD+M DV S I + NG +
Sbjct: 274 G-YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 136 ESAGGLFNELPLKDK------VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
ES+ LF +L KD+ V+WT+M+ QN + EA+E F MQ AGV+ + VT+
Sbjct: 333 ESSLRLFRQL--KDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIP 390
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
++ AC + + + + G +V VGSALIDMY+KCG I + F G+
Sbjct: 391 CLLPACGNIAALMHGKAAHCFSLRRGIS--TDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
+N+ ++++I G+AMHG+A A+++F M ++ KP+ ++F VL+ACS GL
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
YG+ +HYACMV LL RAG LE+A M+ +MPV P+ VWGALL +C++H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
N + ++AA LFELEP GNYI+LSNIYAS GMW++V+RVR ++K GL+KNPG SW
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSW 628
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
+E + +H AGD +HP T+I + L L ++ GY P + VL DV +++K++IL
Sbjct: 629 IEV-KNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQIL 687
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSEKLA+ FGLL T PG ++++KNLRIC DCH+ + S REI VRD RFHHF
Sbjct: 688 CGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHF 747
Query: 538 QDGKCSCGNYW 548
++G CSCG+YW
Sbjct: 748 KEGACSCGDYW 758
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 199/440 (45%), Gaps = 74/440 (16%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LV + V N F ++ LI + ++S + M G+ P + L + KAC +
Sbjct: 69 LVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS 128
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +Q+H + GF SD +V ++++ MY+KC + + +VFD M E DVVSW+ L+
Sbjct: 129 ALKPARQVHG-IASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187
Query: 127 VAYANNGDMESAGGLFNEL----PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
AYA G ++ A LF+E+ + ++W M+ G+ + EA+ F M G E
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247
Query: 183 TDYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-- 235
D T+ V+ A L G++ + + + G +++ V SALIDMY KC
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQ-------GLVSDKCVSSALIDMYGKCSC 300
Query: 236 -----------------------------GSIDDAYRIFVGMKQR----NVFSYSSMILG 262
G ++ + R+F +K + NV S++SMI
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIAC 360
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP---------STD 313
+ +GR A++LF +M KPN VT +L AC ++ +G + STD
Sbjct: 361 CSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTD 420
Query: 314 HY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
Y + ++D+ + G ++ + + +P + N W A++ +H + A +F
Sbjct: 421 VYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAK----EAMEIF 475
Query: 372 EL------EPDKIGNYIILS 385
+L +PD I +LS
Sbjct: 476 DLMQRSGQKPDIISFTCVLS 495
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ YANN A + + +P + +++ ++ + + + A+ F +M G+
Sbjct: 52 TKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLM 111
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D L + ACA L +K A V IA SGF ++ V S+L+ MY KC I DA+
Sbjct: 112 PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD--SDSFVQSSLVHMYIKCNQIRDAH 169
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M + +V S+S+++ +A G A +LF +M + +PN +++ G++ +H G
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Query: 303 L 303
L
Sbjct: 230 L 230
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 45/181 (24%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+ + + L+ Y+ DA + + + NVFS+S++I F+ + H A+ F
Sbjct: 43 GLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTF 102
Query: 277 GDMVKTETKPNGVTFIGVLTACS-------------------------------HVGLKC 305
M+ P+ + AC+ H+ +KC
Sbjct: 103 SQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKC 162
Query: 306 YGV-----------SPSTDHYACMVDLLGRAGCLEEALKMVEKM---PVEPNGGVWGALL 351
+ P ++ +V R GC++EA ++ +M V+PN W ++
Sbjct: 163 NQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMI 222
Query: 352 G 352
Sbjct: 223 A 223
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R+ F+ + KN W A+I GY + G K+++ ++ M+R G P + + + AC++
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/562 (39%), Positives = 344/562 (61%), Gaps = 24/562 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ W +I Y+ G +++ LY + EG T ++ AC+ V
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV 321
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ +H+ IL G S++ V ++ MY KCG L +RKVF+ M RD V+W+ L
Sbjct: 322 KALAQGRLVHSH-ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380
Query: 126 IVAYANNG---DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGV 181
I AYA+NG D A +F+ L +D + W AM+T YVQN A++ F M AG+
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGL 440
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D VT + V+ ACA LG + + +I+E +NVVV + LI+MY++CGS+++
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISESE---LESNVVVTNTLINMYARCGSLEE 497
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F K++ V S+++M+ F+ +GR A+ LF +M KP+ VT+ +L C+H
Sbjct: 498 AERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTH 557
Query: 301 VG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G + +G++P+ DH+A MVDLLGR+G L +A +++E MP EP+ W
Sbjct: 558 GGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWM 617
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
L AC+IH E+ + AA ++EL+P YI +SNIYA+ GMW+ V+ VR+ ++ G
Sbjct: 618 TFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERG 677
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK PG S++E D G +HEF +G HP + EI + L L ++A GY P+ ++VL+DV
Sbjct: 678 LKKLPGLSFIEVD-GKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDV 736
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTS-PGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
S+ EK+ +L+ HSEK+A+AFGL+++ G +R++KNLR+C DCH +++ GR+I+
Sbjct: 737 SEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDII 796
Query: 528 VRDNMRFHHF-QDGKCSCGNYW 548
+RD RFH F DGKCSCG+YW
Sbjct: 797 LRDCNRFHRFSSDGKCSCGDYW 818
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 52/361 (14%)
Query: 6 RLVFEQVKYK--NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE + ++ N W A+I Y GH +++ LY M +G+G T ++ AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ G++IH + + G S + N ++ MY + G +G ++++F + RD SW
Sbjct: 122 ---SLAQGREIHNR-VFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+A++ +GD A +F E+ + KP
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKC---------------DMKP----------------- 205
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T + VIS + V+ + +GF +++VV +ALI+MY KCGS +A
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD--SDLVVATALINMYGKCGSSHEARE 263
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
+F MK+R++ S++ MI + +G H A++L+ + K TF+ +L ACS
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H + G+ +V++ + G LEEA K+ M + W L+G
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIG 382
Query: 353 A 353
A
Sbjct: 383 A 383
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 86/428 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+ ++ ++ W A+I + G ++ ++ M+ + + P S T + +
Sbjct: 162 KRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTP 220
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IHA+ I+ GF SDL V +I MY KCG +R+VFD+M +RD+VSW +
Sbjct: 221 EVLPEGRKIHAE-IVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVM 279
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y NGD EA+E ++++ G +
Sbjct: 280 IGCYVQNGDFH-------------------------------EALELYQKLDMEGFKRTK 308
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V ++ AC+ + + V I E G + V V +AL++MY+KCGS+++A ++
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILER---GLDSEVAVATALVNMYAKCGSLEEARKV 365
Query: 245 FVGMKQRNVFSYSSMILGFAMHGR----------------------------------AH 270
F MK R+ ++S++I +A +G A
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAV 425
Query: 271 AAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG----LKCYGVSPSTDHYA-------CM 318
AA+++F +M KP+ VTFI VL AC+ +G +K S +
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFE-LEPD 376
+++ R G LEEA ++ E W A++ A Q R E + E ++PD
Sbjct: 486 INMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Query: 377 KIGNYIIL 384
+ IL
Sbjct: 545 DVTYTSIL 552
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 50/315 (15%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + T + +C+ DV+ G+ +H + I F D VGN +I MY KC L +R
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALH-ERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VF+ M R ++ V+W AM+ Y QN EA
Sbjct: 64 VFESMDWRQ-----------------------------RNVVSWNAMIAAYAQNGHSTEA 94
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV-VVGSAL 228
+ + RM G+ TD+VT V V+ AC+ L + EI + +++ + +AL
Sbjct: 95 LVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGR------EIHNRVFYSGLDSFQSLANAL 148
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ MY++ GS+ DA R+F ++ R+ S++++IL + G A+++F +M K + KPN
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNS 207
Query: 289 VTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
T+I V++ S H + G ++++ G+ G EA ++ +K
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 338 MPVEPNGGVWGALLG 352
M + + W ++G
Sbjct: 268 MK-KRDMVSWNVMIG 281
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 322/547 (58%), Gaps = 18/547 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+ FLW +IRG S+ LY M ++T L KAC+ + QIH
Sbjct: 74 DTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIH 133
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A I G+ D+Y N++I Y G + +FD + E D VSW +I Y G+M
Sbjct: 134 AH-ITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEM 192
Query: 136 ESAGGLFNELPLKDK-VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ A LF ++P K+ ++WT M++GYVQ +EA++ F MQ + V D V+L +SA
Sbjct: 193 DMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSA 252
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C+QLG ++ W+ A + I++V+ LIDMY+KCG +++A +F MK ++V
Sbjct: 253 CSQLGALEQGKWIHSYANKTR-TRIDSVLC-CVLIDMYAKCGEMEEALGVFKNMKTKSVQ 310
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
++++I G+A HG AI F +M KPN +TF VLTACS+ GL
Sbjct: 311 VWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTI 370
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
+ Y + P+ +HY CMVDLLGRAG L EA + ++KMP++PN +WG+LL ACQIH+N E+
Sbjct: 371 ERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIEL 430
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ L E++ + G Y+ ++NI+A WD + RRL++ G+ K PG S + +
Sbjct: 431 GEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLE- 489
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD-VSDEEKKRILMTHS 481
G HEF AGD +H EI+ + +L+ +GY P L +L D V DEEK+ I+ HS
Sbjct: 490 GTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHS 549
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+ +GL+ T PG T+RIMKNLR+C+DCH M S++ R+IV+RD RFHHF+DGK
Sbjct: 550 EKLAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGK 609
Query: 542 CSCGNYW 548
CSCG+YW
Sbjct: 610 CSCGDYW 616
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 34/267 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD L + + N WT +I GY+ G K+++ L+ M+ + P + +L++
Sbjct: 192 MDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC+++ + G+ IH+ D + +I MY KCG + + VF M + V
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRI-DSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQ 310
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
WT A+++GY + REAI F MQ G
Sbjct: 311 VWT-------------------------------ALISGYAYHGLGREAISKFLEMQNMG 339
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ + +T V++AC+ G+++ V E + + ++D+ + G +++
Sbjct: 340 VKPNAITFTAVLTACSYTGLVEEGKSVFNTIE-RDYNLKPTIEHYGCMVDLLGRAGLLNE 398
Query: 241 AYRIFVGMKQR-NVFSYSSMILGFAMH 266
A R M + N + S++ +H
Sbjct: 399 ANRFIQKMPLKPNAVIWGSLLKACQIH 425
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
FN D W M+ G + +P ++ + RM + T ++ AC+ L
Sbjct: 66 FFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSA 125
Query: 201 IKYANWVCEIAEGSGFGP--------INNVVVG---------------------SALIDM 231
+ + G+G IN+ V +++I
Sbjct: 126 FQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKG 185
Query: 232 YSKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
Y K G +D A +F M ++ N S+++MI G+ G A+QLF +M + P+ V+
Sbjct: 186 YVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVS 245
Query: 291 FIGVLTACSHVG-------LKCYGVSPST--DHYAC--MVDLLGRAGCLEEALKMVEKMP 339
L+ACS +G + Y T D C ++D+ + G +EEAL + + M
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMK 305
Query: 340 VEPNGGVWGALLGACQIH 357
+ + VW AL+ H
Sbjct: 306 TK-SVQVWTALISGYAYH 322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ +K K+ +WTALI GY G +++IS + M+ G+ P + T +A+ AC+
Sbjct: 300 VFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGL 359
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V G+ + + M+ + + G L + + +MP + + V W L+
Sbjct: 360 VEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLL 419
Query: 127 VAYANNGDM---ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
A + ++ E G + E+ + M + K +A E M+ GV
Sbjct: 420 KACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGV 477
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/547 (40%), Positives = 331/547 (60%), Gaps = 21/547 (3%)
Query: 18 FLWTALIRGYILQ---GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
FL+ IRG+ G L S+ L+ M + P +FT + LF+ C+ + LG+Q
Sbjct: 55 FLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQF 114
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H I F D++V N++I Y CG L +R VFDE E DVVSW +I NG+
Sbjct: 115 HGMVIK-NSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGN 173
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ A LF+++ ++ ++W M++GY QN +P+EA+ F MQ E + LV V+SA
Sbjct: 174 ILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSA 233
Query: 195 CAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
C+QLG + + WV C I G +++++ +ALIDMY+KCGSID A + F ++R+V
Sbjct: 234 CSQLGALDHGCWVHCYI--GKKCVRVDSIL-SAALIDMYAKCGSIDLAMQAFSTSRKRDV 290
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---------- 303
+Y++ I G AM+G + A+QLF M P+GV++I VL ACSH G
Sbjct: 291 SAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFAS 350
Query: 304 --KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+G+ P DHYACMVDLLGRAG LEEA K V MP++P+ +WGALLGAC+++ N E
Sbjct: 351 MSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAE 410
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+ Q + L E + + G YI+LSNIYA + +D +VR+ ++ + + PG S +E
Sbjct: 411 MGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV- 469
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
G +HEF +GD +H + EI +++ ++ GY+ R+V++DV +EEK+ ++ HS
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHS 529
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+AFG L T G+T+RI+KN+RIC DCH + S+V R+I +RD FHHF++G
Sbjct: 530 EKLAVAFGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGL 589
Query: 542 CSCGNYW 548
CSC +YW
Sbjct: 590 CSCKDYW 596
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 38/284 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ +N W +I GY G K++++L+ M+ P S L ++ AC+++
Sbjct: 180 LFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGA 239
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +H I D + +I MY KCG + + + F +RDV ++T I
Sbjct: 240 LDHGCWVHCY-IGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAIS 298
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A NG E EA++ FE+M+ G+ D V+
Sbjct: 299 GLAMNGCSE-------------------------------EALQLFEQMKGEGISPDGVS 327
Query: 188 LVGVISACAQLG-VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ V+ AC+ G V K ++ +++ G P + + ++D+ + G +++A +
Sbjct: 328 YIAVLCACSHAGWVEKGFHYFASMSDVHGIRP--ELDHYACMVDLLGRAGLLEEAEKFVA 385
Query: 247 GM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M K NV + +++ ++G A ++ +V+++ +G
Sbjct: 386 SMPIKPDNVI-WGALLGACRVYGNAEMGQRVGSLLVESDQNHDG 428
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + ++ +TA I G + G ++++ L+ M+ EGI P + A+ AC+ V
Sbjct: 282 FSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWV 341
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELIV 127
G A + G +L M+ + + G L + K MP + D V W L+
Sbjct: 342 EKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLG 401
Query: 128 A---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A Y N + G L E + + Y ++ K +A + + M+ V+
Sbjct: 402 ACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVD 459
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 338/592 (57%), Gaps = 54/592 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN + +IR Y+ KD++ +Y +M +G P +T + KA +
Sbjct: 74 RHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRS 133
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G QIH +L G +LYVGN +I MY KC L +++V DE+P RDVVSW +
Sbjct: 134 DSLWVGLQIHG-AVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSM 192
Query: 126 IVAYANNGDMESA-------------------------------------GGLFNELPLK 148
+ YA NG A +F +L K
Sbjct: 193 VSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKK 252
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
++W M+ YV N+ P+EA+ + +M+ GVE D V++V V+ A L + V
Sbjct: 253 SVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVH 312
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+ AE P N+++ +ALIDMY+KCG + DA +F M+ R+V S++S+I + G+
Sbjct: 313 KFAERKKLLP--NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQ 370
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYA 316
A+ +F +M + P+ + F+ VL ACSH GL +C G++P +H+A
Sbjct: 371 GRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKLEHFA 429
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
C+VDLLGRAG ++EA + +MP+EP+ VWG LL AC+++ N I +AA+ L L P+
Sbjct: 430 CVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPE 489
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
G Y++LSNIYA AG W DV+ +R +++ G+KK PG S +E + GV H F AGD +HP
Sbjct: 490 HSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGV-HTFLAGDHSHP 548
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
S +I + L L+ +++ GY P S L+DV +E+K+ L HSEKLA+AF ++ T PG
Sbjct: 549 QSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPG 608
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+R+ KNLR+C DCH+ S++ REI++RD RFHHFQ+G CSCG+YW
Sbjct: 609 TPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 41/267 (15%)
Query: 36 SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
S+S Y + R+ +SFT + + D++ +++H + + + VG ++
Sbjct: 6 SLSRYFATARQ----LSFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLM 61
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
+Y CG G +R +FDE+ +++VV FN
Sbjct: 62 RVYAACGEPGLARHIFDEITDKNVV--------------------FFN-----------V 90
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS- 214
M+ YV N ++A+ ++ M G D T V+ A ++ + WV G+
Sbjct: 91 MIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSL----WVGLQIHGAV 146
Query: 215 -GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
G N+ VG+ LI MY KC S+ +A ++ + R+V S++SM+ +A +GR + A+
Sbjct: 147 LKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDAL 206
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSH 300
+L +M KPN T +L A ++
Sbjct: 207 ELCREMEALNLKPNDCTMASLLPAVTN 233
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 329/557 (59%), Gaps = 28/557 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACT 63
R +F+++ ++ W +I GY G L ++ L+ PV FT +A+
Sbjct: 224 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSGY- 276
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G A+ + G + N +I YV+C + +R++F+ MP ++V SW
Sbjct: 277 ----VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWN 332
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA NGD+ A F+ +P +D ++W A++ GY Q+ EA+ F M+ G
Sbjct: 333 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 392
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T +S CA++ ++ V +G + VG+AL+ MY KCG+IDDAY
Sbjct: 393 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLE--SGCYVGNALLVMYCKCGNIDDAYI 450
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G++++ V S+++MI G+A HG A+ LF M KT P+ VT +GVL+ACSH GL
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG++ ++ HY CM+DLLGRAG L++A +++ MP EP+ WGALL
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA +IH N E+ + AA +FE+EPD G Y++LSN+YA++G W DV R+R ++ G+KK
Sbjct: 571 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 630
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E + IH F GD HP I L +L +++ +GY + + VL+DV +E
Sbjct: 631 VPGYSWVEV-QNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEE 689
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK +L HSEKLA+AFG+L G +R++KNLR+CEDCH M S+++GR I++RD+
Sbjct: 690 EKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDS 749
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF G+CSCG+YW
Sbjct: 750 HRFHHFNGGQCSCGDYW 766
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 19/297 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+Q+ ++ W A++ GY G++K++ ++ M + S + + + A
Sbjct: 131 RLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAY--- 183
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ A+ + +L N M+G YVK L +R +FD MPERD VSW +
Sbjct: 184 --VQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 241
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG++ A LF E P++D WTAMV+GYVQN EA F+ M E +
Sbjct: 242 ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNS 297
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +I+ Q + A + E P NV + +I Y++ G I A F
Sbjct: 298 VSWNAIIAGYVQCKRMDQARELFEAM------PCQNVSSWNTMITGYAQNGDIAQARNFF 351
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M QR+ S++++I G+A G A+ LF +M + + N TF L+ C+ +
Sbjct: 352 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 408
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 42/287 (14%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W I ++ G ++ L+ SM R S + +A+ C L +Q+ +
Sbjct: 52 WNIAITNHMRNGQCDSALRLFNSMPRRS----SISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
T DL N MI V+ L +R +FD+MPERDVVSW ++ YA NG ++ A
Sbjct: 108 -----TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK 162
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER----------------------MQ 177
+F+E+P K+ ++W M+ YVQN + +A FE +
Sbjct: 163 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVD 222
Query: 178 YAGV-----ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
G+ E D V+ +IS AQ G + A + E + P+ +V +A++ Y
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEES------PVRDVFTWTAMVSGY 276
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+ G +D+A R+F GM ++N S++++I G+ R A +LF M
Sbjct: 277 VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 32/328 (9%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
+D+ N I +++ G + ++F+ MP R +SW +I +N A LF ++
Sbjct: 47 ADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM 106
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P +D V+W M++G V+ R A F++M E D V+ ++S AQ G +K A
Sbjct: 107 PTRDLVSWNVMISGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQNGYVKEAK 162
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + P N + + ++ Y + G I+DA R+F + S++ M+ G+
Sbjct: 163 EIFDEM------PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVK 216
Query: 266 HGRAHAAIQLFG-----DMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD--HYACM 318
R A +F D V T +G G L + + SP D + M
Sbjct: 217 RNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ----RLFEESPVRDVFTWTAM 272
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELEP-D 376
V + G L+EA ++ + MP E N W A++ G Q R + A LFE P
Sbjct: 273 VSGYVQNGMLDEARRVFDGMP-EKNSVSWNAIIAGYVQCKRMDQ-----ARELFEAMPCQ 326
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLL 404
+ ++ + YA G D+++ R
Sbjct: 327 NVSSWNTMITGYAQNG---DIAQARNFF 351
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/550 (40%), Positives = 325/550 (59%), Gaps = 21/550 (3%)
Query: 16 NPFLWT--ALIRGYILQGHLKDSISLYCSM---RREGIGPVSFTLSALFKACTEVLDVSL 70
NP L+T ++IR Y S Y ++ + P ++T + L + C ++
Sbjct: 71 NPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVT 130
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G +H ++ GF D +V ++ MY + G L VFD E D+V+ T ++ A A
Sbjct: 131 GLCVHG-AVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACA 189
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
GD++ A +F+E+P +D V W AM+ GY Q + REA++ F MQ GV+ + V++V
Sbjct: 190 KCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVL 249
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+SAC L V+ + WV E + V +G+AL+DMY+KCG++D A ++F GMK+
Sbjct: 250 VLSACTHLQVLDHGRWVHAYVER--YKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE 307
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
RNV+++SS I G AM+G ++ LF DM + +PNG+TFI VL CS VGL
Sbjct: 308 RNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKH 367
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YG+ P +HY MVD+ GRAG L+EAL + MP+ P+ G W ALL AC++++
Sbjct: 368 FDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYK 427
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N E+ +IA + ELE G Y++LSNIYA W+ VS +R+ +K G+KK PG S +
Sbjct: 428 NKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVI 487
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E D G +HEF GD +HP EI+ L ++ L+ GY N VL+D+ +EEK+ L
Sbjct: 488 EVD-GEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALS 546
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEK+A+AFGL++ +R++ NLRIC DCH S++ REI+VRD RFHHF+
Sbjct: 547 KHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFK 606
Query: 539 DGKCSCGNYW 548
DG+CSC +YW
Sbjct: 607 DGECSCKDYW 616
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 50/294 (17%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F+++ ++ W A+I GY G ++++ ++ M+ EG+ ++ + ACT
Sbjct: 196 FARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACT 255
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ +HA + + +G ++ MY KCG + + +VF M ER+V +W+
Sbjct: 256 HLQVLDHGRWVHAY-VERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWS 314
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
I A NG E + LFN+ M+ GV+
Sbjct: 315 SAIGGLAMNGFGEESLDLFND-------------------------------MKREGVQP 343
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEG-SGFGPINNVV-VGSAL------IDMYSKC 235
+ +T + V+ C+ +G+++ EG F + NV +G L +DMY +
Sbjct: 344 NGITFISVLKGCSVVGLVE---------EGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRA 394
Query: 236 GSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
G + +A M R +V ++S+++ M+ +V+ E K +G
Sbjct: 395 GRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDG 448
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +K +N + W++ I G + G ++S+ L+ M+REG+ P T ++ K C+ V
Sbjct: 301 VFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGL 360
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV-SWTELI 126
V G++ + G L M+ MY + G L + + MP R V +W+ L+
Sbjct: 361 VEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALL 420
Query: 127 VA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A Y N E A EL K+ A+ + Y + M+ GV+
Sbjct: 421 HACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVK 479
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/561 (39%), Positives = 323/561 (57%), Gaps = 54/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL--FKACT 63
R F+++ NP + TA+ GY+ + S++L+ + G +AL F A
Sbjct: 145 RKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASA 204
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEMPERDVVS 121
+ D + +HA ++ G D V NTM+ Y K G LG +RKVFD M
Sbjct: 205 RIPDCGITSSLHA-LVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME------ 257
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ--YA 179
KD V+W +M+ Y QN +A+ + +M
Sbjct: 258 --------------------------KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSG 291
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ + VTL ++ ACA G I+ C + G NV VG++++DMYSKCG ++
Sbjct: 292 SIKCNAVTLSAILLACAHAGTIQTGK--CIHNQVVRMGLEENVYVGTSVVDMYSKCGRVE 349
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A + F +K++N+ S+S+MI G+ MHG A+ +F +M ++ PN +TFI VL ACS
Sbjct: 350 MARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACS 409
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL K +G+ P +HY CMVDLLGRAGCL+EA ++++M V+P+ +W
Sbjct: 410 HAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIW 469
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+IH+N E+A+I+A LFEL+ G Y++LSNIYA AGMW DV R+R L+K
Sbjct: 470 GALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTR 529
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G++K PGYS +E +G H F GD +HP EI LG LL+++Q GY PN SVL+D
Sbjct: 530 GIEKPPGYSSVE-LKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHD 588
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +EEK L HSEKLA+AF L+ + PG+ + ++KNLR+C DCH + +++ REI+
Sbjct: 589 LDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREII 648
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSCG+YW
Sbjct: 649 VRDLQRFHHFKDGSCSCGDYW 669
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 147/345 (42%), Gaps = 57/345 (16%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+H I G F SD + + ++ MY C +RK FDE+P
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPS-------------- 153
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET--DYVTL 188
+ V TAM +GYV+N ++ F ++ +G T D
Sbjct: 154 -----------------PNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAA 196
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID--DAYRIFV 246
+ SA A++ + + + +G VV + ++D Y+K G D A ++F
Sbjct: 197 LVAFSASARIPDCGITSSLHALVVKTGLDGDAGVV--NTMLDAYAKGGRRDLGAARKVFD 254
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM--VKTETKPNGVTFIGVLTACSHVGL- 303
M +++V S++SMI +A +G + A+ L+ M V K N VT +L AC+H G
Sbjct: 255 TM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTI 313
Query: 304 ---KC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
KC G+ + +VD+ + G +E A K +K+ E N W A++
Sbjct: 314 QTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK-EKNILSWSAMITG 372
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS---AGMWD 395
+H + + A N + + NYI ++ A+ AG+ D
Sbjct: 373 YGMHGHGQEALDIFNEM--CRSGQNPNYITFISVLAACSHAGLLD 415
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 338/595 (56%), Gaps = 58/595 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N + +IR Y+ G + + ++ +M + P +T + KAC+
Sbjct: 94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCS 153
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IH +G +S L+VGN ++ MY KCGFL +R V DEM RDVVSW L
Sbjct: 154 GTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 126 IVAYANNG----------DMES------AGGLFNELPL---------------------K 148
+V YA N +MES AG + + LP K
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M+ Y++NA P EA+E + RM+ G E D V++ V+ AC + +
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E P N+++ +ALIDMY+KCG ++ A +F MK R+V S+++MI + GR
Sbjct: 333 GYIERKKLIP--NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC-------YGVSPSTDHYA 316
A+ LF + + P+ + F+ L ACSH GL C Y ++P +H A
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA 450
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLLGRAG ++EA + ++ M +EPN VWGALLGAC++H + +I +AA+ LF+L P+
Sbjct: 451 CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPE 510
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W++V+ +R ++K GLKKNPG S +E +R +IH F GD +HP
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR-IIHTFLVGDRSHP 569
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS-- 494
S EI + L L+ +++ GY P+ S L+DV +E+K+ L HSEKLA+ F L+ T
Sbjct: 570 QSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEE 629
Query: 495 ---PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
T+RI KNLRIC DCH+ SQ+ REI++RD RFH F+ G CSC +
Sbjct: 630 EEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCAS 684
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 2/178 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ AYA+ D+ SA +F+E+P ++ + M+ YV N E ++ F M V
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D+ T V+ AC+ G I + A G + + VG+ L+ MY KCG + +A
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS--STLFVGNGLVSMYGKCGFLSEARL 196
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+ M +R+V S++S+++G+A + R A+++ +M + + T +L A S+
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N +G L+ Y+ + A ++F + +RNV + MI + +G +++FG M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLE 329
+P+ TF VL ACS +G K +G + + +V + G+ G L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 330 EALKMVEKM 338
EA ++++M
Sbjct: 193 EARLVLDEM 201
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/549 (42%), Positives = 321/549 (58%), Gaps = 20/549 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W L+ G G D+++ M EG P + +S A +V +VS+G+Q+H
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVH 176
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ G D V +I MY KCG +VF E DV S L+ + N +
Sbjct: 177 GY-VVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQV 235
Query: 136 ESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
A LF E + + V+WT++V VQN + EA++ F MQ GVE + VT+ V
Sbjct: 236 SEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCV 295
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ A A + + + + GF +++V VGSAL+DMY+KCG A IF M R
Sbjct: 296 LPAFANVAALMHGRSAHCFSLRKGF--LHDVYVGSALVDMYAKCGKARHARTIFDAMPSR 353
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
NV S+++MI G+AMHG A A+QLF M K + KP+ VTF VL ACS GL
Sbjct: 354 NVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYF 413
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
+ +G+SP +HYACMV LLGR+G L+EA ++ +MP EP+ +WG+LLG+C+++ N
Sbjct: 414 NEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
+A++AA LF+LEP GNY++LSNIYAS MWD V+RVR +K GLKK G SW+E
Sbjct: 474 VLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIE 533
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
+ +H AGD +HP T I + L L + G+ P+ VL+DV ++EK IL
Sbjct: 534 -IKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAV 592
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+A GL++T PG +R++KNLRIC DCH M S REI VRD RFHHF+D
Sbjct: 593 HSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKD 652
Query: 540 GKCSCGNYW 548
GKCSCG+YW
Sbjct: 653 GKCSCGDYW 661
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 57/375 (15%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
+ S SLY +R P L + K+C L + +HA ++ G D +V +
Sbjct: 1 MSHSNSLYHFLRHVSFPPDPHLLPSALKSCPAQ---PLARALHAAAVV-SGLAEDPFVAS 56
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPL----K 148
+++ Y++ G G +R VFD MPE++VV W+ LI Y+ GD E+A GL ++
Sbjct: 57 SLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEP 116
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ + W +V+G ++ + +A+ RM G D + +SA + + V
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVH 176
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF---------------VGMKQR-- 251
+G + V +ALIDMY KCG D+ R+F G+ +
Sbjct: 177 GYVVKAGCRL--DACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQ 234
Query: 252 ------------------NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
NV S++S++ +GR A+ LF M +PN VT
Sbjct: 235 VSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPC 294
Query: 294 VLTACSHVGLKCYGVSPST---------DHY--ACMVDLLGRAGCLEEALKMVEKMPVEP 342
VL A ++V +G S D Y + +VD+ + G A + + MP
Sbjct: 295 VLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSR- 353
Query: 343 NGGVWGALLGACQIH 357
N W A++G +H
Sbjct: 354 NVVSWNAMIGGYAMH 368
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N W A+I GY + G +++ L+CSM++ P T + + AC++
Sbjct: 344 RTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQA 403
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
G++ + G + + M+ + + G L + + +EMP E D W
Sbjct: 404 GLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGS 463
Query: 125 LI 126
L+
Sbjct: 464 LL 465
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/549 (41%), Positives = 324/549 (59%), Gaps = 20/549 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W L+ G G +D++ M EG P + +S A +V DV++G+Q+H
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLH 179
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ G D V +I MY KCG +VFDE DV S L+ + N +
Sbjct: 180 GY-VVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQV 238
Query: 136 ESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
A LF E + + V+WT++V VQN + EA++ F MQ G+E + VT+ V
Sbjct: 239 SEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCV 298
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ A A + + + + GF +++ VGSAL+DMY+KCG + DA IF M R
Sbjct: 299 LPAFANIAALMHGRSAHCFSLRKGFH--HDIYVGSALVDMYAKCGRVRDARMIFEAMPYR 356
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
NV S+++MI G+AMHG A A++LF M ++ KP+ VTF VL ACS G
Sbjct: 357 NVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYF 416
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
+G+SP +HYACMV LLGRAG L++A ++ +MP EP+G +WG+LLG+C++H N
Sbjct: 417 NEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGN 476
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
+A++AA +LF+LEP+ GNY++LSNIYAS MWD V+R+R ++K GLKK G SW+E
Sbjct: 477 VVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIE 536
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
+ +H AGD +HP I + L L ++ G+ P+ VL+DV ++EK IL
Sbjct: 537 -IKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSV 595
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+A GL++TS G ++++KNLRIC DCH M S REI VRD RFHHF+D
Sbjct: 596 HSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKD 655
Query: 540 GKCSCGNYW 548
GKCSC +YW
Sbjct: 656 GKCSCADYW 664
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G + D +V ++++ Y++ G +R V D MP R VV W+ LI A+A++GD E A GL
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 143 NELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
+ + + W +V+G ++ + R+A+ RM G D + +SA +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF------------- 245
G + + +G + V +ALIDMY KCG D+ R+F
Sbjct: 170 GDVAVGEQLHGYVVKAGCRL--DACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNA 227
Query: 246 --VGMKQR--------------------NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
G+ + NV S++S++ +GR A+ LF +M
Sbjct: 228 LVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEG 287
Query: 284 TKPNGVTFIGVLTACSHVGLKCYGVSPST---------DHY--ACMVDLLGRAGCLEEAL 332
+PN VT VL A +++ +G S D Y + +VD+ + G + +A
Sbjct: 288 IEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDAR 347
Query: 333 KMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ E MP N W A++G +H E A
Sbjct: 348 MIFEAMPYR-NVVSWNAMIGGYAMHGEAENA 377
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++FE + Y+N W A+I GY + G ++++ L+ SM+ P T + + AC++
Sbjct: 347 RMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQA 406
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
G+ + G + + M+ + + G L + + ++MP E D W
Sbjct: 407 GWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGS 466
Query: 125 LI 126
L+
Sbjct: 467 LL 468
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 332/556 (59%), Gaps = 32/556 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + +N WT LI G++ G +S+ L+ MR E + F L+ L C +D
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ L G + V N++I MY KC L + +F M E+D+VSWT +I
Sbjct: 407 LCLGRQLHS-LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM---QYAGVETD 184
AY+ G++ A F+ + K+ + W AM+ Y+Q+ + + ++ M +Y V D
Sbjct: 466 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY--VRPD 523
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA LG K + + I G I + V +A+I MYSKCG I +A ++
Sbjct: 524 WVTYVTLFKGCADLGANKLGDQI--IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 581
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + +++ S+++MI G++ HG AI++F D++K KP+ ++++ VL+ CSH GL
Sbjct: 582 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLV 641
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + +SP +H++CMVDLLGRAG L EA +++ MP++P VWGALL
Sbjct: 642 QEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLS 701
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+A++AA H+FEL+ G+Y++++ IYA AG DD +++R+L++ G+KKN
Sbjct: 702 ACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 761
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E D V H F+A D++HP I++ L +L++++ GY V D + E
Sbjct: 762 PGYSWMEVDNKV-HVFKADDVSHPQVLAIRKKLDELMEKIARLGY------VRTDSTRSE 814
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
+ HSEKLA+AFGL+T + IMKNLRIC DCH + S V GRE V+RD +
Sbjct: 815 -----IHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAV 869
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF G CSCG+YW
Sbjct: 870 RFHHFNGGSCSCGDYW 885
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 8/275 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F ++ ++ W L+ GY S+ + SM R G P +FTL+ K+C +
Sbjct: 113 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 172
Query: 67 DVSLGQQIHAQTILLGGFTS--DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
SL Q+ A ++ F S D V ++ M+V+CG + + ++F + E +
Sbjct: 173 WHSLALQLLA---MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNS 229
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ Y ++ A LF+ +P +D V+W MV+ Q+ + REA++ MQ GV D
Sbjct: 230 MLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLD 289
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++ACA+L +++ + A+ P + V SAL+++Y+K G +A +
Sbjct: 290 STTYTSSLTACARLSSLRWGKQLH--AQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 347
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
F + RN +++ +I GF +G +++LF M
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 382
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 43/312 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W ++ G +++++ + M+ +G+ S T ++ AC +
Sbjct: 246 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 305
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HAQ I +P D + L+
Sbjct: 306 LRWGKQLHAQVI--------------------------------RNLPHIDPYVASALVE 333
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA +G + A G+FN L ++ VAWT +++G++Q E++E F +M+ + D
Sbjct: 334 LYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFA 393
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +IS C + + + S G I VVV ++LI MY+KC ++ A IF
Sbjct: 394 LATLISGCCSRMDLCLGRQLHSLCLKS--GQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 451
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHVG 302
M ++++ S++SMI ++ G A + F M ++ N +T+ +L A G
Sbjct: 452 MNEKDIVSWTSMITAYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHGAEEDG 507
Query: 303 LKCYGVSPSTDH 314
L+ Y V S ++
Sbjct: 508 LRMYKVMLSEEY 519
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 47/314 (14%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERDVVSWTELIVAYANNGDMESAGGL 141
G S +++ NT++ Y+ CG L +R++ ++ +V++ ++ YA G + A L
Sbjct: 54 GLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVEL 113
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYVTLVGVISACAQLGV 200
F +P +D +W +++GY Q+ + ++E F M +G + TL + +C LG
Sbjct: 114 FGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGW 173
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV-------------- 246
A + + + F ++ V +AL+DM+ +CG++D A R+FV
Sbjct: 174 HSLALQLLAMVQ--KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSML 231
Query: 247 -----------------GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
M +R+V S++ M+ + GR A+ + DM + +
Sbjct: 232 AGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDST 291
Query: 290 TFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDLLGRAGCLEEALKMVEKM 338
T+ LTAC+ + +G P D Y + +V+L ++GC +EA + +
Sbjct: 292 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 351
Query: 339 PVEPNGGVWGALLG 352
+ N W L+
Sbjct: 352 H-DRNNVAWTVLIS 364
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 42/251 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R F+ + KN W A++ YI G +D + +Y M E + P T LFK C +
Sbjct: 477 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 536
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG QI +T+ + G D V N +I MY KCG + +RKVFD + +D+VSW
Sbjct: 537 LGANKLGDQIIGRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 595
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I TGY Q+ ++AIE F+ + G + D
Sbjct: 596 MI-------------------------------TGYSQHGMGKQAIEIFDDILKRGAKPD 624
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDD 240
Y++ V V+S C+ G+++ + ++ + + +N+ G S ++D+ + G + +
Sbjct: 625 YISYVAVLSGCSHSGLVQEGKFYFDMMKRA-----HNISPGLEHFSCMVDLLGRAGHLTE 679
Query: 241 AYRIFVGMKQR 251
A + M +
Sbjct: 680 AKDLIDDMPMK 690
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 4/183 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I GY G K +I ++ + + G P + A+ C+
Sbjct: 579 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 638
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS-WTE 124
V G+ + L + M+ + + G L ++ + D+MP + W
Sbjct: 639 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 698
Query: 125 LIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + NN E A EL D ++ M Y K ++ + + M+ G+
Sbjct: 699 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 758
Query: 182 ETD 184
+ +
Sbjct: 759 KKN 761
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 334/556 (60%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+++ K+ WTA+I G G +++++Y M++ G+ P T +++ AC+
Sbjct: 383 RLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSP 442
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH Q ++ G +D +VGNT++ MY CG + +R+VFD M +R
Sbjct: 443 AALEWGRRIH-QQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQR-------- 493
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D VA+ AM+ GY + +EA++ F+R+Q G++ D
Sbjct: 494 -----------------------DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK 530
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + +++ACA G +++A + + GF ++ VG+AL+ Y+KCGS DA +F
Sbjct: 531 VTYINMLNACANSGSLEWAREIHTLVRKGGF--FSDTSVGNALVSTYAKCGSFSDASIVF 588
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +RNV S++++I G A HGR A+QLF M KP+ VTF+ +L+ACSH GL
Sbjct: 589 EKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLE 648
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + + P+ +HY CMVDLLGRAG L+EA +++ MP + N +WGALLGA
Sbjct: 649 EGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGA 708
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N +A+ AA +L+ D Y+ LS++YA+AGMWD +++R+L++ G+ K P
Sbjct: 709 CRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEP 768
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW++ GD+ +H F A D +HP S +I L L ++ GY P+ RSV++DV + E
Sbjct: 769 GRSWIQVGDK--LHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGE 826
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSE+LA+A+GL++T PG + I KNLR+C DCH S+++ REI+ RD
Sbjct: 827 KENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVN 886
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 887 RFHHFKDGVCSCGDYW 902
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 220/489 (44%), Gaps = 90/489 (18%)
Query: 6 RLVFEQVKY--KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R V++++ Y + W A++ GYI G+++ ++ L M++ G+ P T+ + +C
Sbjct: 78 RQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCK 137
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ G++IH Q + G D+ V N ++ MY KCG + +R+VFD+M ++ VVSWT
Sbjct: 138 SPGALEWGREIHFQA-MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWT 196
Query: 124 ELIVAYANNGDMESAGGLFNELPLK----------------------------------- 148
I YA+ G E+A +F ++ +
Sbjct: 197 ITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNA 256
Query: 149 ----DKVAWTAMVTGYVQNAKPREAIEYFER----------------------------- 175
D TA+V Y + ++ + FE+
Sbjct: 257 GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVY 316
Query: 176 --MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
MQ GV + +T V +++AC + + + +GF +++ V +ALI MYS
Sbjct: 317 NQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF--TSDIGVQNALISMYS 374
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
+CGSI DA +F M +++V S+++MI G A G A+ ++ +M + +PN VT+
Sbjct: 375 RCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434
Query: 294 VLTACSHVGLKCYG---------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEP 342
+L ACS +G +TD + +V++ G +++A ++ ++M ++
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQR 493
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRV 400
+ + A++G H + A + L E L+PDK+ YI + N A++G + +
Sbjct: 494 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV-TYINMLNACANSGSLEWAREI 552
Query: 401 RRLLKMTGL 409
L++ G
Sbjct: 553 HTLVRKGGF 561
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 169/364 (46%), Gaps = 46/364 (12%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
++++G S + K C EV D+ G+Q+H Q I+ D Y N +I MY++CG
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVH-QHIIQHRTVPDQYTVNALINMYIQCG 72
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ +R+V+ ++ S+ E V +W AMV GY+Q
Sbjct: 73 SIEEARQVWKKL------SYMERTVH-----------------------SWNAMVVGYIQ 103
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
+A++ +MQ G+ D T++ +S+C G +++ + A +G + +V
Sbjct: 104 YGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGL--LFDV 161
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V + +++MY+KCGSI++A +F M++++V S++ I G+A GR+ A ++F M +
Sbjct: 162 KVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQE 221
Query: 283 ETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
PN +T+I VL A S H + G T +V + + G ++
Sbjct: 222 GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDC 281
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYA 389
++ EK+ V + W ++G E A N + + P+KI I+L+
Sbjct: 282 RQVFEKL-VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 390 SAGM 393
SA +
Sbjct: 341 SAAL 344
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 334/559 (59%), Gaps = 20/559 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE++ + +W A+I GY+ G ++ L+ M + I P FT ++L AC
Sbjct: 250 RSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANA 309
Query: 66 LDVSLGQQIHAQTILL-GGFTSD--LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
G+ +H Q I L F + L V N ++ +Y K G + + K+FD M +DVVSW
Sbjct: 310 GFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSW 369
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y +G +++A +F E+P K +++W MV+GYV +A++ F +M+ V+
Sbjct: 370 NTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T G ++AC +LG +K+ + GF N+ G+AL+ MY++CG++ DA
Sbjct: 430 PCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSA--GNALLTMYARCGAVKDAR 487
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F+ M + S+++MI HG A++LF MV P+ ++F+ +LTAC+H G
Sbjct: 488 LVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAG 547
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G+SP DHYA ++DLLGRAG + EA +++ MP EP +W A+
Sbjct: 548 LVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAI 607
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+I+ + E+ AA+ LF++ P+ G YI+LSN Y++AG W D +RVR+L++ G+K
Sbjct: 608 LSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 667
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG SW+E G++ +H F GD HP++ E+ + L + +++ GY P+ + L D++
Sbjct: 668 KEPGCSWIEVGNK--VHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMA 725
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EK+ +L HSE+LA++FGLL GATV ++KNL+IC DCH M S+ +GREIVVR
Sbjct: 726 PHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVR 785
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG+CSCGNYW
Sbjct: 786 DVRRFHHFKDGECSCGNYW 804
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 199/452 (44%), Gaps = 70/452 (15%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALF 59
DS P V ++ L A+I + ++S++ S+ + + P ++ ++L
Sbjct: 113 DSVP------VARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLL 166
Query: 60 KACTEVLDVSLGQ--QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR---KVFDEM 114
A ++ D+++ Q+H LG + L V N +I +Y+KC G +R KV DEM
Sbjct: 167 SAVGQMHDLAVSHCTQLHCAVHKLGA-GAVLSVSNALIALYMKCDAPGVTRDARKVLDEM 225
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
PE+D ++WT ++V + GD+ +A F E+ + V W AM++GYVQ+ EA E F
Sbjct: 226 PEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFR 285
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMY 232
RM + D T ++SACA G + V I F P + V +AL+ +Y
Sbjct: 286 RMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLY 345
Query: 233 SKCGSI-------------------------------DDAYRIFVGMKQRNVFSYSSMIL 261
SK G I D+A RIF M ++ S+ M+
Sbjct: 346 SKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVS 405
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVS 309
G+ G A A++LF M + KP T+ G + AC +G ++C G
Sbjct: 406 GYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQC-GFE 464
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA-----Q 364
S ++ + R G +++A + MP + W A++ A H + A Q
Sbjct: 465 ASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMISALGQHGHGREALELFDQ 523
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
+ A ++ PD+I IL+ AG+ DD
Sbjct: 524 MVAQGIY---PDRISFLTILTAC-NHAGLVDD 551
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/550 (41%), Positives = 334/550 (60%), Gaps = 25/550 (4%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFKACTEVLDVSLGQQIHA 76
+T+ I + +G + +++L M R G+ P + TLSA AC +++G+ +H
Sbjct: 89 FYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACG---CLAVGRALHG 145
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTELIVAYANNGDM 135
+ L + + YV ++GMY + G +R +FD M P+ VVS T ++ YA G +
Sbjct: 146 YAVKLA-LSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQL 204
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+ A GLF+ LP KD V W AM+ GY Q+ +P EA+ F +M +GVE D V++V +SA
Sbjct: 205 DDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAV 264
Query: 196 AQLGVIKYANWVCE-IAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFV---GMKQ 250
AQLG + W+ +A G + N VG+AL+DMY KCGS+++A +F G
Sbjct: 265 AQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGD 324
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
R+V ++++MI G+AMHGR+ A++ FG + P +TFIGVL ACSH GL
Sbjct: 325 RDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRAL 384
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
+ YG+ P +HY CMVDLLGRAG +EEA +V+ M +P+ +W +LLGAC++H+
Sbjct: 385 FAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHK 444
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
N + Q A++L G Y++LSN+YA+AG W +V RVR +++ +G++K PG S +
Sbjct: 445 NLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAV 504
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E R V+ EF AGD +HP S EI L ++ +A G+ P+ VL+D+ D K+R L
Sbjct: 505 EVGRRVV-EFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALA 563
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLALAFGL++T P ++I+KNLR C DCH + S+ GR+IV RD RFHHF
Sbjct: 564 VHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFV 623
Query: 539 DGKCSCGNYW 548
DG CSCG+YW
Sbjct: 624 DGSCSCGDYW 633
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A++ GY G +++ L+ M R G+ P ++ A ++
Sbjct: 208 RGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQL 267
Query: 66 LDVSLGQQIHAQTILLGGFTS----DLYVGNTMIGMYVKCGFLGCSRKVFDEM---PERD 118
G+ +H+ + GG + + VG ++ MY KCG L + VF ++ +RD
Sbjct: 268 GTAESGRWLHS-FVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRD 326
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VV+W +I GY + + REA+E F +++
Sbjct: 327 VVAWNAMI-------------------------------NGYAMHGRSREALEAFGQLRA 355
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+ +T +GV++AC+ G++ + E +G + V ++D+ + G +
Sbjct: 356 QGLWPTDITFIGVLNACSHSGLVDEGRALFAAME-EEYGIVPKVEHYGCMVDLLGRAGRV 414
Query: 239 DDAYRIFVGMKQRNVFSYSSMILG 262
++A+ + MK + + + +LG
Sbjct: 415 EEAFDLVQSMKAKPDAAMWASLLG 438
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 330/558 (59%), Gaps = 18/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE+V K +W A+I GY+ G ++ L+ M E + FT +++ AC V
Sbjct: 248 RSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANV 307
Query: 66 LDVSLGQQIHAQTILL-GGFTSD--LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+ +H Q I L F + L V N ++ Y KCG + +R++FD M +DVVSW
Sbjct: 308 GLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSW 367
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y + ++ A +F E+P K++++W MV+GYV +A++ F +M+ V+
Sbjct: 368 NTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVK 427
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T G I+AC +LG +K+ + GF N+ G+ALI MY++CG++ +A+
Sbjct: 428 PCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSA--GNALITMYARCGAVKEAH 485
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F+ M + S+++MI HG A++LF MV P+ ++F+ VLTAC+H G
Sbjct: 486 LMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSG 545
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G+ P DHY ++DLLGRAG + EA +++ MP EP +W A+
Sbjct: 546 LVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAI 605
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ + E+ AA+ LF++ P G YI+LSN Y++AG W D +RVR+L++ G+K
Sbjct: 606 LSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVK 665
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E V H F GD HP + E+ + L + +++ GY P+ + VL+D+
Sbjct: 666 KEPGCSWIEAGNKV-HVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEP 724
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+K+ IL HSE+LA+ FGLL PGATV ++KNLRIC+DCH + S+ +GREIVVRD
Sbjct: 725 HQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRD 784
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG+CSCGNYW
Sbjct: 785 VRRFHHFKDGECSCGNYW 802
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 189/423 (44%), Gaps = 54/423 (12%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQ- 72
++ L A+I Y H +++++ S+ G + P ++ +AL A + ++S+
Sbjct: 119 RDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHC 178
Query: 73 -QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR---KVFDEMPERDVVSWTELIVA 128
Q+H ++L G L V N ++ +Y+KC +R KV DEMP +D ++WT ++V
Sbjct: 179 AQLHC-SVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVG 237
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y GD+ +A +F E+ K V W AM++GYV + EA E F RM V D T
Sbjct: 238 YVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTF 297
Query: 189 VGVISACAQLGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+SACA +G+ + V I F P + V +AL+ YSKCG+I A RIF
Sbjct: 298 TSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFD 357
Query: 247 GMKQRNVFSYSS-------------------------------MILGFAMHGRAHAAIQL 275
M ++V S+++ M+ G+ G A A++L
Sbjct: 358 NMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKL 417
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGR 324
F M KP T+ G + AC +G + G S ++ + R
Sbjct: 418 FNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYAR 477
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIGNYI 382
G ++EA M MP + W A++ A H E ++ + E + PD+I
Sbjct: 478 CGAVKEAHLMFLVMP-NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLT 536
Query: 383 ILS 385
+L+
Sbjct: 537 VLT 539
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 323/553 (58%), Gaps = 16/553 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++K K+ W+ALI Y ++++ L+ M GI + ++ AC+ +L
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLV 304
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+ +H + +G + + + N +I MY C + ++K+F E D +SW +I
Sbjct: 305 VITGKLVHGLVVKVG-IETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y G++E A LF+ +P KD V+W+AM++GY Q + E + F+ MQ G + D
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VISAC L + W+ +G N+++G+ LI+MY K G ++DA +F G
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKI--NIILGTTLINMYMKLGCVEDALEVFKG 481
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
++++ V +++++ILG AM+G +++ F +M + PN +TF+ VL AC H+GL
Sbjct: 482 LEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEG 541
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + + P+ HY CMVDLLGRAG L+EA +++E MP+ P+ WGALLGAC+
Sbjct: 542 HRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACK 601
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ + E + L EL PD G ++LSNIYAS G W DV VR +++ G+ K PG
Sbjct: 602 KYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGC 661
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E G +HEF AGD THP + I+ L ++ +L+ +GY P+ R V D+ +EEK+
Sbjct: 662 SMIEA-HGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKET 720
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL+ P +RI+KNLRIC DCH S+ REIVVRD RFH
Sbjct: 721 TLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFH 780
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 781 HFKQGSCSCMDYW 793
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 191/417 (45%), Gaps = 77/417 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ N F+ +++GY+ + +I +Y M + ++T LF++C+ L
Sbjct: 82 IFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLA 141
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--------------- 112
G+ I +L GF SD+Y+ NT+I MY CG L +RKVFD
Sbjct: 142 EFDGKCIQDH-VLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLA 200
Query: 113 ----------------EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
MPER+V++ +IV + G++E A LFNE+ KD V+W+A+
Sbjct: 201 GYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSAL 260
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
++ Y QN EA+ F+ M G+ D V ++ V+SAC++L V+ V + G
Sbjct: 261 ISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGI 320
Query: 217 GPINNVVVGSALIDMYS-------------------------------KCGSIDDAYRIF 245
N + +ALI MYS KCG I+ A +F
Sbjct: 321 ETYVN--LQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALF 378
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M ++ S+S+MI G+A R + LF +M TKP+ + V++AC+H+
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438
Query: 303 --------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ G+ + ++++ + GC+E+AL++ + + E W AL+
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNALI 494
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W+A+I GY Q +++ L+ M+ EG P L ++ ACT +
Sbjct: 375 RALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHL 434
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IHA I G ++ +G T+I MY+K G + + +VF + E+ V +W L
Sbjct: 435 AALDQGKWIHAY-IRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNAL 493
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ A NG L DK +++ F M+ GV +
Sbjct: 494 ILGLAMNG-------------LVDK------------------SLKTFSEMKEHGVTPNE 522
Query: 186 VTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T V V+ AC +G++ + + + GP N+ ++D+ + G + +A +
Sbjct: 523 ITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGP--NIKHYGCMVDLLGRAGMLKEAEEL 580
Query: 245 FVGM 248
M
Sbjct: 581 IESM 584
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 329/557 (59%), Gaps = 28/557 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACT 63
R +F+++ ++ W +I GY G L ++ L+ PV FT +A+
Sbjct: 143 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSGY- 195
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G A+ + G + N +I YV+C + +R++F+ MP ++V SW
Sbjct: 196 ----VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWN 251
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA NGD+ A F+ +P +D ++W A++ GY Q+ EA+ F M+ G
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 311
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T +S CA++ ++ V +G + VG+AL+ MY KCG+IDDAY
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLE--SGCYVGNALLVMYCKCGNIDDAYI 369
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G++++ V S+++MI G+A HG A+ LF M KT P+ VT +GVL+ACSH GL
Sbjct: 370 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG++ ++ HY CM+DLLGRAG L++A +++ MP EP+ WGALL
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA +IH N E+ + AA +FE+EPD G Y++LSN+YA++G W DV R+R ++ G+KK
Sbjct: 490 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 549
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E + IH F GD HP I L +L +++ +GY + + VL+DV +E
Sbjct: 550 VPGYSWVEV-QNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEE 608
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK +L HSEKLA+AFG+L G +R++KNLR+CEDCH M S+++GR I++RD+
Sbjct: 609 EKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDS 668
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF G+CSCG+YW
Sbjct: 669 HRFHHFNGGQCSCGDYW 685
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 19/297 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+Q+ ++ W A++ GY G++K++ ++ M + S + + + A
Sbjct: 50 RLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAY--- 102
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ A+ + +L N M+G YVK L +R +FD MPERD VSW +
Sbjct: 103 --VQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 160
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG++ A LF E P++D WTAMV+GYVQN EA F+ M E +
Sbjct: 161 ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNS 216
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +I+ Q + A + E P NV + +I Y++ G I A F
Sbjct: 217 VSWNAIIAGYVQCKRMDQARELFEAM------PCQNVSSWNTMITGYAQNGDIAQARNFF 270
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M QR+ S++++I G+A G A+ LF +M + + N TF L+ C+ +
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 327
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 33/203 (16%)
Query: 104 LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
L +R +FD+MPERDVVSW ++ YA NG ++ A +F+E+P K+ ++W M+ YVQN
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQN 105
Query: 164 AKPREAIEYFER----------------------MQYAGV-----ETDYVTLVGVISACA 196
+ +A FE + G+ E D V+ +IS A
Sbjct: 106 GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYA 165
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
Q G + A + E + P+ +V +A++ Y + G +D+A R+F GM ++N S+
Sbjct: 166 QNGELLEAQRLFEES------PVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSW 219
Query: 257 SSMILGFAMHGRAHAAIQLFGDM 279
+++I G+ R A +LF M
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAM 242
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 54/294 (18%)
Query: 115 PERDVVSWTEL--IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
PE D + +L V Y N + +A LF+++P +D V+W AM++GY QN +EA E
Sbjct: 27 PEFDFLERHDLRGCVRYRN---LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEI 83
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F+ M + ++ G+++A Q G I+ A + E N ++ G Y
Sbjct: 84 FDEMPC----KNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG------Y 133
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
K + DA IF M +R+ S+++MI G+A +G A +LF E P F
Sbjct: 134 VKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF------EESPVRDVFT 187
Query: 293 GVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL- 351
+ MV + G L+EA ++ + MP E N W A++
Sbjct: 188 ----------------------WTAMVSGYVQNGMLDEARRVFDGMP-EKNSVSWNAIIA 224
Query: 352 GACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGMWDDVSRVRRLL 404
G Q R + A LFE P + ++ + YA G D+++ R
Sbjct: 225 GYVQCKRMDQ-----ARELFEAMPCQNVSSWNTMITGYAQNG---DIAQARNFF 270
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 336/556 (60%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F ++ K+ WTA+I G G ++++++ M++ G+ P T +++ AC+
Sbjct: 501 RLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSP 560
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH Q ++ G +D +V NT++ MY CG + +R+VFD M +
Sbjct: 561 AALDWGRRIH-QQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ--------- 610
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+D VA+ AM+ GY + +EA++ F+R+Q G++ D
Sbjct: 611 ----------------------RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK 648
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + +++ACA G +++A + + G+ +++ +G+AL+ Y+KCGS DA +F
Sbjct: 649 VTYINMLNACANSGSLEWAKEIHSLVLKDGY--LSDTSLGNALVSTYAKCGSFSDALLVF 706
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +RNV S++++I G A HGR +QLF M KP+ VTF+ +L+ACSH GL
Sbjct: 707 DKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLE 766
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G++P+ +HY CMVDLLGRAG L+E +++ MP + N +WGALLGA
Sbjct: 767 EGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGA 826
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N +A+ AA +L+PD Y+ LS++YA+AGMWD +++R+L++ G+ K P
Sbjct: 827 CRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEP 886
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E GD+ +H F A D +HP S +I L L ++ +GY P+ RSV++DV + E
Sbjct: 887 GRSWIEVGDK--LHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGE 944
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSE+LA+A+GL++T PG +RI KNLR+C DCH ++++ REIV RD
Sbjct: 945 KENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVN 1004
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 1005 RFHHFKDGVCSCGDYW 1020
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 194/416 (46%), Gaps = 49/416 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ K+ WT +I GY GH + + ++ M++EG+ P T + A +
Sbjct: 299 REVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGP 358
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ IL G SDL VG ++ MY KCG R+V
Sbjct: 359 AALKWGKTVHSH-ILNAGHESDLAVGTALVKMYAKCGSYKDCRQV--------------- 402
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F +L +D +AW M+ G + EA E + +MQ G+ +
Sbjct: 403 ----------------FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNK 446
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V +++AC + + + GF + ++ V +ALI MY++CGSI DA +F
Sbjct: 447 ITYVILLNACVNPTALHWGREIHSRVVKDGF--MFDISVQNALISMYARCGSIKDARLLF 504
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M ++++ S+++MI G A G A+ +F DM + KPN VT+ +L ACS
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G++ +V++ G +++A ++ ++M + + + A++G
Sbjct: 565 WGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM-TQRDIVAYNAMIGGY 623
Query: 355 QIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
H + A + L E L+PDK+ YI + N A++G + + L+ G
Sbjct: 624 AAHNLGKEALKLFDRLQEEGLKPDKV-TYINMLNACANSGSLEWAKEIHSLVLKDG 678
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 159/353 (45%), Gaps = 64/353 (18%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GY+ G++++++ L M++ G+ T L +C + G++IH +
Sbjct: 212 WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA- 270
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ D+ V N ++ MY KCG + +R+VF
Sbjct: 271 MKARLLFDVNVANCILNMYAKCGSIHEAREVF---------------------------- 302
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+++ K V+WT ++ GY A E F++MQ GV + +T + V++A +
Sbjct: 303 ---DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+K+ V +G +++ VG+AL+ MY+KCGS D ++F + R++ ++++M
Sbjct: 360 ALKWGKTVHSHILNAGHE--SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 417
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA--- 316
I G A G A +++ M + PN +T++ +L AC V+P+ H+
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC---------VNPTALHWGREI 468
Query: 317 -----------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
++ + R G +++A + KM V + W A++G
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIG 520
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 53/360 (14%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
++++G S + K C EV D+ G+++H + I+ D Y N +I MY++CG
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVH-EHIIQHCTVLDQYTVNALINMYIQCG 190
Query: 103 FLGCSRKVFDEM--PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
+ +R+V++++ ER V S W AMV GY
Sbjct: 191 SIEEARQVWNKLNHTERTVHS-------------------------------WNAMVVGY 219
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
VQ EA++ MQ G+ T + ++S+C ++ + E +
Sbjct: 220 VQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIH--VEAMKARLLF 277
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+V V + +++MY+KCGSI +A +F M+ ++V S++ +I G+A G + A ++F M
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 281 KTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLE 329
+ PN +T+I VL A S H + G +V + + G +
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK 397
Query: 330 EALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE---PDKIGNYIILSN 386
+ ++ EK+ V + W ++G N E A H + E P+KI Y+IL N
Sbjct: 398 DCRQVFEKL-VNRDLIAWNTMIGGLAEGGNWEEAS-EIYHQMQREGMMPNKI-TYVILLN 454
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 326/558 (58%), Gaps = 47/558 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W A+I GY+ G ++++ L+ M R + P TL ++ AC +
Sbjct: 150 RKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQS 209
Query: 66 LDVSLGQQIHA---QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ LG+Q+H+ GF+S L + N +I +Y KCG
Sbjct: 210 GSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG-------------------- 249
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D+E+A GLF L KD V+W ++ GY +EA+ F+ M +G
Sbjct: 250 -----------DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC 298
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VTL+ V+ ACA LG I W+ + G N + ++LIDMY+KCG I+ A+
Sbjct: 299 PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAH 358
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R++ S+++MI GFAMHGRA+AA LF M +P+ +TF+G+L+ACSH G
Sbjct: 359 QVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSG 418
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + Y ++P +HY CM+DLLG +G +EA +M+ MP+EP+G +W +L
Sbjct: 419 LLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSL 478
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+ H N E+A+ A L ++EP+ G+Y++LSNIYA+AG W+DV+RVR +L G+K
Sbjct: 479 LKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMK 538
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S +E D V+HEF GD HP EI L ++ +L+ G+ P+ VL ++ +
Sbjct: 539 KVPGCSSIEVD-SVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEE 597
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K+ L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REIV RD
Sbjct: 598 EWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARD 657
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 658 RTRFHHFRDGVCSCCDYW 675
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 217/412 (52%), Gaps = 34/412 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W ++RG+ ++ +Y M G P S++ L K+C +
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
G+QIHAQ + LG G D YV ++I MY + G L +RKVFD RDVVS T LI
Sbjct: 80 FEEGRQIHAQVLKLGCGL--DRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALI 137
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA+ GD SA +F+E+ +D V+W AM+TGYV+N + EA+E F+ M V D
Sbjct: 138 TGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEG 197
Query: 187 TLVGVISACAQLGVIKYA----NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
TLV V+SACAQ G I+ +WV + + GF +V +ALID+YSKCG ++ A+
Sbjct: 198 TLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV--NALIDLYSKCGDVETAF 255
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F G+ ++V S++++I G+ A+ LF +M+++ PN VT + VL AC+H+G
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 303 L-------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
K GV+ T ++D+ + G +E A ++ M + + W A
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-LYRSLSSWNA 374
Query: 350 LLGACQIHRNPEIAQIAANHLF------ELEPDKIGNYIILSNIYASAGMWD 395
++ +H AA LF +EPD I ++ L + + +G+ D
Sbjct: 375 MIFGFAMHGRAN----AAFDLFSRMRGNRVEPDDI-TFVGLLSACSHSGLLD 421
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
EL V + + A +F + + + W M+ G+ ++ P A+E + RM G
Sbjct: 3 ELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLP 62
Query: 184 DYVTLVGVISACAQ------------------LGVIKY--ANWVCEIAEGSGF------- 216
+ + ++ +CA+ G+ +Y + + A G
Sbjct: 63 NSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVF 122
Query: 217 --GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+VV +ALI Y+ G A ++F + +R+V S+++MI G+ +GR A++
Sbjct: 123 DASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALE 182
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVG---------------LKCYGVSPSTDHYACMV 319
LF +M++T +P+ T + V++AC+ G +G S S ++
Sbjct: 183 LFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALI 242
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
DL + G +E A + E + + + W L+G
Sbjct: 243 DLYSKCGDVETAFGLFEGLSCK-DVVSWNTLIG 274
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/554 (39%), Positives = 330/554 (59%), Gaps = 19/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ KN W A+I G++ ++++ L + R G P + ++ AC + D
Sbjct: 511 LFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGD 570
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V +G+ IH+ I G F S YV N +I MY KCG + VF + +D VSW LI
Sbjct: 571 VEIGRVIHSLAIKTGCQFNS--YVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLI 628
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ N ++ A +F ++P +D V+WTA+++ YVQ A++ F M G++ + +
Sbjct: 629 SGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQL 688
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+ ++SAC LG IK + GF + VG++LI MY KCG +D + +F
Sbjct: 689 TVTSLLSACGNLGAIKLGEQFHALIFKLGFDTF--LFVGNSLITMYFKCG-YEDGFCVFE 745
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M + ++ +++++++G A +G AI++F M P+ ++F+GVL ACSH GL
Sbjct: 746 EMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDE 805
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P HY CMVDLLGRAG L EA ++E MPV+P+ +W ALLGAC
Sbjct: 806 GWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 865
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IHRN E+ Q A LF++ K Y++LSN++AS GMWD V+ +R+L+K GL K PG
Sbjct: 866 RIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPG 925
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW++ + +H F GD TH EI AL + +A GY P+ VL+DV +E+K+
Sbjct: 926 ISWIQV-KNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQ 984
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L+ HSEKLA+ FG+L+T G+ ++I+KNLRIC DCH FM S+V R+I++RD RF
Sbjct: 985 NELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRF 1044
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSCG+YW
Sbjct: 1045 HHFRDGSCSCGDYW 1058
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 177/354 (50%), Gaps = 23/354 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++ W ++I GY G + ++ L+ + + I + L+ K
Sbjct: 191 RRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKE---- 246
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+ A+ + ++ N MI YV+ G L +RK+FDEMPE++V SW +
Sbjct: 247 -----GRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSV 301
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y + M A LF+++P ++ V+W M++GYV + EA + F +M D
Sbjct: 302 VTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQ 361
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V V+SA L ++ + IA +G+ +VVVGSA+++ Y++ GS+D A F
Sbjct: 362 SIFVVVLSAITGLDDLELIGSLRPIAIKTGYE--GDVVVGSAILNAYTRNGSLDLAMHFF 419
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +RN +S+++MI FA GR AIQL+ + V +T T ++TA + VG
Sbjct: 420 ETMPERNEYSWTTMIAAFAQCGRLDDAIQLY-ERVPEQTV---ATKTAMMTAYAQVGRIQ 475
Query: 306 YG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
++P+ + ++ + G L+EA + +KMPV+ N W A++
Sbjct: 476 KARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIA 528
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 73/325 (22%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + +N + WT +I + G L D+I LY
Sbjct: 419 FETMPERNEYSWTTMIAAFAQCGRLDDAIQLY---------------------------- 450
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+++ QT+ M+ Y + G + +R +FDE+ +VV+W +I
Sbjct: 451 ---ERVPEQTVA---------TKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG 498
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y NG ++ A LF ++P+K+ +W AM+ G+VQN + REA+E + +G +
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI---------- 238
+SACA +G ++ + +A +G N V + LI MY+KCG++
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQ--FNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 239 ---------------------DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
DDA +F M +R+V S++++I + G A+ LF
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 278 DMVKTETKPNGVTFIGVLTACSHVG 302
DM+ KPN +T +L+AC ++G
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLG 701
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 38/289 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VFE++ ++ WTA+I Y+ GH + ++ L+ M GI P T+++L AC +
Sbjct: 641 RVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG--CSRKVFDEMPERDVVSWT 123
+ LG+Q HA L GF + L+VGN++I MY KCG+ C VF+EMPE D+++W
Sbjct: 701 GAIKLGEQFHALIFKL-GFDTFLFVGNSLITMYFKCGYEDGFC---VFEEMPEHDLITWN 756
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++V G QN +EAI+ FE+M+ G+
Sbjct: 757 AVLV-------------------------------GCAQNGLGKEAIKIFEQMEVEGILP 785
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D ++ +GV+ AC+ G++ W + +G + V + ++D+ + G + +A
Sbjct: 786 DQMSFLGVLCACSHAGLVD-EGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEA 844
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+ M + +LG R Q + + TKP T++
Sbjct: 845 LIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYV 893
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 29/320 (9%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
+ L+ NT I + G + +R+VF+EM +RDVVSW +I Y+ NG ++ A LF+
Sbjct: 169 THLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF 228
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
K+ WT ++TGY + + EA E FE M E + V+ +IS Q G +K A
Sbjct: 229 VGKNIRTWTILLTGYAKEGRIEEAREVFESM----TERNVVSWNAMISGYVQNGDLKNAR 284
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + N+VV G Y C + +A +F M +RN S+ MI G+
Sbjct: 285 KLFDEMPEKNVASWNSVVTG------YCHCYRMSEARELFDQMPERNSVSWMVMISGYVH 338
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GLKCYG----VSPSTDHY----- 315
A +F M +T +P+ F+ VL+A + + L+ G ++ T +
Sbjct: 339 ISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVV 398
Query: 316 -ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFEL 373
+ +++ R G L+ A+ E MP E N W ++ A Q R + Q L+E
Sbjct: 399 GSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRLDDAIQ-----LYER 452
Query: 374 EPDK-IGNYIILSNIYASAG 392
P++ + + YA G
Sbjct: 453 VPEQTVATKTAMMTAYAQVG 472
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
E P+ + I G +E A +FNE+ +D V+W +M+ GY QN K EA
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F+ + T + L G A+ G I+ A V E NVV +A+I Y
Sbjct: 225 FDAFVGKNIRTWTILLTGY----AKEGRIEEAREVFESMTE------RNVVSWNAMISGY 274
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+ G + +A ++F M ++NV S++S++ G+ R A +LF M + N V+++
Sbjct: 275 VQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM----PERNSVSWM 330
Query: 293 GVLTACSHVG 302
+++ H+
Sbjct: 331 VMISGYVHIS 340
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 332/556 (59%), Gaps = 32/556 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + +N WT LI G++ G +S+ L+ MR E + F L+ L C +D
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ L G + V N++I MY KC L + +F M E+D+VSWT +I
Sbjct: 387 LCLGRQLHS-LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM---QYAGVETD 184
AY+ G++ A F+ + K+ + W AM+ Y+Q+ + + ++ M +Y V D
Sbjct: 446 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY--VRPD 503
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA LG K + + I G I + V +A+I MYSKCG I +A ++
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQI--IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 561
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + +++ S+++MI G++ HG AI++F D++K KP+ ++++ VL+ CSH GL
Sbjct: 562 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLV 621
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + +SP +H++CMVDLLGRAG L EA +++ MP++P VWGALL
Sbjct: 622 QEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLS 681
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+A++AA H+FEL+ G+Y++++ IYA AG DD +++R+L++ G+KKN
Sbjct: 682 ACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E D V H F+A D++HP I++ L +L++++ GY V D + E
Sbjct: 742 PGYSWMEVDNKV-HVFKADDVSHPQVLAIRKKLDELMEKIARLGY------VRTDSTRSE 794
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
+ HSEKLA+AFGL+T + IMKNLRIC DCH + S V GRE V+RD +
Sbjct: 795 -----IHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAV 849
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF G CSCG+YW
Sbjct: 850 RFHHFNGGSCSCGDYW 865
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 8/275 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F ++ ++ W L+ GY S+ + SM R G P +FTL+ K+C +
Sbjct: 93 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 152
Query: 67 DVSLGQQIHAQTILLGGFTS--DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
SL Q+ A ++ F S D V ++ M+V+CG + + ++F + E +
Sbjct: 153 WHSLALQLLA---MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNS 209
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ Y ++ A LF+ +P +D V+W MV+ Q+ + REA++ MQ GV D
Sbjct: 210 MLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLD 269
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++ACA+L +++ + A+ P + V SAL+++Y+K G +A +
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLH--AQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 327
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
F + RN +++ +I GF +G +++LF M
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 362
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 43/312 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W ++ G +++++ + M+ +G+ S T ++ AC +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HAQ I +P D + L+
Sbjct: 286 LRWGKQLHAQVI--------------------------------RNLPHIDPYVASALVE 313
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA +G + A G+FN L ++ VAWT +++G++Q E++E F +M+ + D
Sbjct: 314 LYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFA 373
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +IS C + + + S G I VVV ++LI MY+KC ++ A IF
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKS--GQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 431
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHVG 302
M ++++ S++SMI ++ G A + F M ++ N +T+ +L A G
Sbjct: 432 MNEKDIVSWTSMITAYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHGAEEDG 487
Query: 303 LKCYGVSPSTDH 314
L+ Y V S ++
Sbjct: 488 LRMYKVMLSEEY 499
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 47/314 (14%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERDVVSWTELIVAYANNGDMESAGGL 141
G S +++ NT++ Y+ CG L +R++ ++ +V++ ++ YA G + A L
Sbjct: 34 GLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVEL 93
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYVTLVGVISACAQLGV 200
F +P +D +W +++GY Q+ + ++E F M +G + TL + +C LG
Sbjct: 94 FGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGW 153
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV-------------- 246
A + + + F ++ V +AL+DM+ +CG++D A R+FV
Sbjct: 154 HSLALQLLAMVQ--KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSML 211
Query: 247 -----------------GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
M +R+V S++ M+ + GR A+ + DM + +
Sbjct: 212 AGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDST 271
Query: 290 TFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDLLGRAGCLEEALKMVEKM 338
T+ LTAC+ + +G P D Y + +V+L ++GC +EA + +
Sbjct: 272 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 331
Query: 339 PVEPNGGVWGALLG 352
+ N W L+
Sbjct: 332 H-DRNNVAWTVLIS 344
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 42/251 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R F+ + KN W A++ YI G +D + +Y M E + P T LFK C +
Sbjct: 457 REFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCAD 516
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG QI +T+ + G D V N +I MY KCG + +RKVFD + +D+VSW
Sbjct: 517 LGANKLGDQIIGRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 575
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I TGY Q+ ++AIE F+ + G + D
Sbjct: 576 MI-------------------------------TGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDD 240
Y++ V V+S C+ G+++ + ++ + + +N+ G S ++D+ + G + +
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKFYFDMMKRA-----HNISPGLEHFSCMVDLLGRAGHLTE 659
Query: 241 AYRIFVGMKQR 251
A + M +
Sbjct: 660 AKDLIDDMPMK 670
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 4/183 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I GY G K +I ++ + + G P + A+ C+
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 618
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS-WTE 124
V G+ + L + M+ + + G L ++ + D+MP + W
Sbjct: 619 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 678
Query: 125 LIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + NN E A EL D ++ M Y K ++ + + M+ G+
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 182 ETD 184
+ +
Sbjct: 739 KKN 741
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 322/556 (57%), Gaps = 46/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ W A+I GY G ++++++ + MRR + P T+ ++ AC +
Sbjct: 214 RELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQS 273
Query: 66 -LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG + + I G S++ + N +I MYVKCG
Sbjct: 274 GSSLQLGNWVRSW-IEDRGLGSNIRLVNGLIDMYVKCG---------------------- 310
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
D+E A LF ++ K+ V+W M+ GY + +EA+ F RM + ++ +
Sbjct: 311 ---------DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPN 361
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + ++ ACA LG + WV + + N V + ++LIDMY+KCG + A RI
Sbjct: 362 DVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRI 421
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +++ ++++MI GFAMHG A+ LF M P+ +TF+GVLTAC H GL
Sbjct: 422 FDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLL 481
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ Y VSP HY CM+DL GRAG +EA +V+ M ++P+G +W +LLG
Sbjct: 482 SLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLG 541
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IHR E+A+ A HLFELEP+ Y++LSNIYA AG W+DV+++R L +KK
Sbjct: 542 ACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKV 601
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG S +E D V+HEF GD HP S EI + L ++ RL+ G+ P+ VLYD+ +E
Sbjct: 602 PGCSSIEVD-SVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEW 660
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLA+AFGL++T PG T+RIMKNLR+C +CH S++ REI+ RD
Sbjct: 661 KEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRN 720
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 721 RFHHFKDGSCSCKDYW 736
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 203/375 (54%), Gaps = 18/375 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +F+ ++ N +W +IRG ++ Y M G P +T ++FK+C
Sbjct: 79 SYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSC 138
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T++ G+Q+HA + LG + +V ++I MY + G L +R VFD+ RD VS+
Sbjct: 139 TKIRGAHEGKQVHAHVLKLG-LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI YA+ G ++ A LF+E+P++D V+W AM++GY Q+ + EA+ +FE M+ A V
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 183 TDYVTLVGVISACAQLG-VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ T++ V+SACAQ G ++ NWV E G G +N+ + + LIDMY KCG +++A
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLG--SNIRLVNGLIDMYVKCGDLEEA 315
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++ +NV S++ MI G+ A+ LF M+++ PN VTF+ +L AC+++
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375
Query: 302 GLKCYG-------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G G + + + ++D+ + G L A ++ + M + + W
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWN 434
Query: 349 ALLGACQIHRNPEIA 363
A++ +H + + A
Sbjct: 435 AMISGFAMHGHTDTA 449
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 46/268 (17%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A + +GD+ A LF + + V W M+ G + P A+EY+ M +G E + T
Sbjct: 71 AVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYT 130
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS---------- 237
+ +C ++ V A G +N V ++LI+MY++ G
Sbjct: 131 FPSIFKSCTKIRGAHEGKQVH--AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDK 188
Query: 238 ---------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+D+A +F + R+V S+++MI G+A GR A+ F
Sbjct: 189 SSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFF 248
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLGR 324
+M + + PN T + VL+AC+ G ++ G+ + ++D+ +
Sbjct: 249 EEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVK 308
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLG 352
G LEEA + EK+ + N W ++G
Sbjct: 309 CGDLEEASNLFEKIQ-DKNVVSWNVMIG 335
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 326/566 (57%), Gaps = 34/566 (6%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK------ 60
LV + ++ L ALIR + G + ++ LY + R G+ P TL +L K
Sbjct: 43 LVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSP 102
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDV 119
A ++L HA + L GF L V N +I ++ G L + + D
Sbjct: 103 AVPGARRLALAVHAHAVRLGLAGF---LLVNNALIRVHAGLLGRLADAHLLLRTSAAVDA 159
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
++ LI A+A G + A LF+E+P ++ V+W+AMV GYVQ REA+ F +MQ
Sbjct: 160 STFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQ 219
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN----VVVGSALIDMYSKC 235
GV D LVGV++ACAQLG ++ WV G+ NN V +G+AL+DMY+KC
Sbjct: 220 GVRPDDTVLVGVLAACAQLGALEQGKWV------HGYLKANNIRMTVFLGTALVDMYAKC 273
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + +F GMK +NV ++++MI G AMHGR ++ LF M + KP+ + FIG L
Sbjct: 274 GEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGAL 333
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
AC+H GL YG+ P +HY CMVDLL R G L EA MVEKMP++P+
Sbjct: 334 CACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPD 393
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+WGAL+ C+ H+N E+A+ H ELEPDK G Y++L NIY+++G +R L
Sbjct: 394 ALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNL 453
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLR 462
++ G++K PG S +E +GVIH+F GDL+HP +I ++ R++ +GY P+ +
Sbjct: 454 MREKGVEKTPGCSNVE-IKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKK 512
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
VL D+ +EE + L HSEKLA+AF L++T +RI+KNLR+C+DCH S+V
Sbjct: 513 EVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVY 572
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
GREI+VRD RFH F+DG CSC +YW
Sbjct: 573 GREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 128/286 (44%), Gaps = 42/286 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W+A++ GY+ G ++++ ++ M+ +G+ P L + AC ++
Sbjct: 179 RSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQL 238
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + +++G ++ MY KCG + +VF+ M +++V++W
Sbjct: 239 GALEQGKWVHGY-LKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAW--- 294
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T M+ G + + +++ F +M+ +GV+ D
Sbjct: 295 ----------------------------TTMIKGLAMHGRGSDSLTLFSQMESSGVKPDD 326
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ +G + AC G++ K + G P + ++D+ ++ G + +A
Sbjct: 327 IAFIGALCACTHTGLVDKGRELFNSMVNNYGIKP--KIEHYGCMVDLLARNGLLSEAR-- 382
Query: 245 FVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVK--TETKPN 287
M ++ ++I G M G R H ++L ++K E +P+
Sbjct: 383 --DMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPD 426
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 328/553 (59%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ WTALI G++ +G+ + ++ M EG P +T ++ ++C+ + D
Sbjct: 248 VFGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+Q+HAQ I+ + +VG ++ MY K FL
Sbjct: 307 VDLGKQVHAQ-IVKNSLDGNDFVGTALVDMYAKNRFL----------------------- 342
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A +FN L +D AWT +V GY Q+ + +A++ F +MQ GV+ + T
Sbjct: 343 --------EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 394
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +S C+++ + + +A +G ++ V SAL+DMY+KCG ++DA +F G
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAG--QSGDMFVASALVDMYAKCGCVEDAEVVFDG 452
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ R+ S++++I G++ HG+ A++ F M+ T P+ VTFIGVL+ACSH+GL
Sbjct: 453 LVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 512
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG++P+ +HYACMVD+LGRAG E +E+M + N +W +LGAC+
Sbjct: 513 KKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 572
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E + AA LFELEP+ NYI+LSN++A+ GMWDDV+ VR L+ G+KK PG
Sbjct: 573 MHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGC 632
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +H F + D +HP EI L DL +L + GY PN VL++VSD EK+
Sbjct: 633 SWVEVN-GQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQE 691
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LALAF LL+TS T+RI KNLRIC DCH FM S++ +E+VVRD FH
Sbjct: 692 LLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFH 751
Query: 536 HFQDGKCSCGNYW 548
HF++G CSC N+W
Sbjct: 752 HFKNGSCSCQNFW 764
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 48/298 (16%)
Query: 46 EGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG 105
EG P +T ++ K C D++ G+ IH Q ++ G D ++ N+++ +Y KC
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEGKAIHGQ-VIKSGINPDSHLWNSLVNVYAKC---- 239
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
G A +F E+P +D V+WTA++TG+V
Sbjct: 240 ---------------------------GSANYACKVFGEIPERDVVSWTALITGFVAEGY 272
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVV 224
+ F +M G + T + ++ +C+ L + V +I + S G N V
Sbjct: 273 G-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG---NDFV 328
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
G+AL+DMY+K ++DA IF + +R++F+++ ++ G+A G+ A++ F M +
Sbjct: 329 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 388
Query: 285 KPNGVTFIGVLTACSHV-----GLKCYGVS----PSTDHY--ACMVDLLGRAGCLEEA 331
KPN T L+ CS + G + + ++ S D + + +VD+ + GC+E+A
Sbjct: 389 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 446
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 126/284 (44%), Gaps = 45/284 (15%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
++ G D ++ ++++ +YVKC L C+R+V +EMP +DV W N + SA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQW---------NQKLSSA 65
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
+ PL+ EA++ F M++ + + +ISA A L
Sbjct: 66 NSPY---PLQ-------------------EAVQLFYLMRHTRIRLNQFIFASLISAAASL 103
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G Y + GF +++++ +A + MY K S+++ ++ F M N+ S ++
Sbjct: 104 GDNHYGESIHACVCKYGFE--SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNN 161
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYG 307
++ GF ++ ++ +PN TFI +L C+ H + G
Sbjct: 162 LLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSG 221
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++P + + +V++ + G A K+ ++P E + W AL+
Sbjct: 222 INPDSHLWNSLVNVYAKCGSANYACKVFGEIP-ERDVVSWTALI 264
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/564 (40%), Positives = 332/564 (58%), Gaps = 56/564 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-----REGIGPV---SFTLSA 57
R +F+++ ++N WT++I GY+ ++ L+ EG G V + +
Sbjct: 207 RTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVS 266
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ AC+ V + S+ + +H ++ GF DL V NT++ Y KCG LG SR+VFD M E
Sbjct: 267 VLSACSRVSEKSITEGVHG-FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE- 324
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+D ++W +++ Y QN E++E F RM
Sbjct: 325 ------------------------------RDVISWNSIIAVYAQNGMSTESMEIFHRMV 354
Query: 178 YAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
G + + VTL V+ ACA G + C + G +NV VG+++IDMY KCG
Sbjct: 355 KDGEINYNAVTLSAVLLACAHSGSQRLGK--CIHDQVIKMGLESNVFVGTSIIDMYCKCG 412
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A + F M+++NV S+S+M+ G+ MHG A A+++F +M KPN +TF+ VL
Sbjct: 413 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 472
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL + V P +HY CMVDLLGRAG L+EA +++ M + P+
Sbjct: 473 ACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDF 532
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
VWGALLGAC++H+N ++ +I+A LFEL+P G Y++LSNIYA AG W+DV R+R L+
Sbjct: 533 VVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILM 592
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K +GL K PG+S ++ +G +H F GD HP +I + L L +LQ GY P++ SV
Sbjct: 593 KNSGLVKPPGFSLVD-IKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSV 651
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+DV EEK+ +L HSEKLA+AFG++ T PG T+ I+KNLR+C DCH + S+++ R
Sbjct: 652 LHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDR 711
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EIVVRD+ RFHHF+DG CSCG+YW
Sbjct: 712 EIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 189/392 (48%), Gaps = 43/392 (10%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V N F W ++I G +++ + SMR+ + P T K+C+ +LD+ G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+Q H Q ++ G F DL+V + ++ MY KCG L +R +FDE+ R++VSWT +I Y
Sbjct: 172 RQAHQQALIFG-FEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
N D A LF E +++ +G + + V D + +V V
Sbjct: 231 NDDAHRALLLFKEFLVEE--------SGSEGDGE---------------VCVDPIAMVSV 267
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+SAC+++ V GF ++ V + L+D Y+KCG + + R+F GM +R
Sbjct: 268 LSACSRVSEKSITEGVHGFLIKRGFE--GDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVGL----KC- 305
+V S++S+I +A +G + ++++F MVK E N VT VL AC+H G KC
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385
Query: 306 ------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
G+ + ++D+ + G +E A K ++M E N W A++ +H +
Sbjct: 386 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGH 444
Query: 360 PEIAQIAANHLFELEPDKIG-NYIILSNIYAS 390
A+ A +E+ + NYI ++ A+
Sbjct: 445 ---AKEALEVFYEMNMAGVKPNYITFVSVLAA 473
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 323/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + WTALI Y+ G L++++ + + G+ P SFT + AC + D
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ + + G ++V + +YVKCG + +R+V
Sbjct: 188 LATGETV-WRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV----------------- 229
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F+++ KD VAW AMV GY N PREA++ F MQ G++ D
Sbjct: 230 --------------FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 275
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G +SAC +LG + + + F ++N V+G+ALIDMY+KCGS +A+ +F
Sbjct: 276 VAGALSACTRLGALDLGRQAIRMVDWDEF--LDNPVLGTALIDMYAKCGSTVEAWVVFQQ 333
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++++ +++MILG M G A L G M K+ K N TFIG+L +C+H GL
Sbjct: 334 MRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDG 393
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y +SP +HY CMVDLL RAG L+EA ++V+ MP+ N + GALLG C+
Sbjct: 394 RRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCK 453
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN E+A+ L LEP GNY++LSNIY++ G W+D +++R +K G++K P
Sbjct: 454 IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPAC 513
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEFR GD +HP S +I + L +L ++ GY+P V++DV DEEK+
Sbjct: 514 SWVEFE-GKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEH 572
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AF LL T PG T+R+ KNLR+C DCH + S++ REI+VRDN RFH
Sbjct: 573 TLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFH 632
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 633 CFRDGSCSCNDYW 645
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 50 PVSFTLSALFKACTEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P T+ K+ + + + G+Q+HA+++ L T+ +V +++ +Y KCG L ++
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNP-HVLTSLLSLYAKCGLLHRAQ 126
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+V F+E+P V WTA++T Y+ RE
Sbjct: 127 RV-------------------------------FDEMPHPSTVPWTALITAYMDAGDLRE 155
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
A+ G+ D T V V++ACA++ + V AE G +V V +A
Sbjct: 156 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA--QSVFVATAA 213
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+D+Y KCG + A +F M+ ++ ++ +M+ G+A +G A+ LF M KP+
Sbjct: 214 VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDC 273
Query: 289 VTFIGVLTACSHVG 302
G L+AC+ +G
Sbjct: 274 YAVAGALSACTRLG 287
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 53/291 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++++K+ W A++ GY GH ++++ L+ +M+ EG+ P + ++ ACT +
Sbjct: 227 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 286
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q + + F + +G +I MY KCG + VF +M ++D++ W +
Sbjct: 287 GALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 345
Query: 126 I----------VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE- 174
I +A+A G ME +G N+ + + TG +Q+ + YF
Sbjct: 346 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC-SCTHTGLIQDGR-----RYFHN 399
Query: 175 ---------RMQYAGVETDYVTLVGVISACAQL--GVIKYANWV--------CEIAEGSG 215
R+++ G D ++ G++ QL + AN V C+I +
Sbjct: 400 MTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTE 459
Query: 216 FG-----------PIN--NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
P N N V+ L ++YS G +DA ++ + MK + V
Sbjct: 460 LAEHVLKQLILLEPWNSGNYVM---LSNIYSNRGRWEDAAKLRLDMKAKGV 507
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V ++L+ +Y+KCG + A R+F M + ++++I + G A+ + +
Sbjct: 104 TNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNA 163
Query: 280 VKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACMVDLLGRAGCL 328
+P+ T + VLTAC+ + + GV+ S VDL + G +
Sbjct: 164 FANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEM 223
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+A ++ +KM + WGA++G + +P A
Sbjct: 224 AKAREVFDKMR-HKDAVAWGAMVGGYASNGHPREA 257
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/566 (39%), Positives = 344/566 (60%), Gaps = 26/566 (4%)
Query: 3 SFPRLVFEQVKYKNP-FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS---FTLSAL 58
SF R+VF+Q P +W +I+ Y ++S+ L+ M G P S +T + +
Sbjct: 104 SFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFV 162
Query: 59 FKACTEVLDVS-LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
F AC+ + G+ +H ++ G+ SD++VGN+++ MY + +++VFDEMP+R
Sbjct: 163 FTACSRHPTLRGYGENVHGM-VVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQR 221
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV++WT ++ YA G++ A LF+ +P ++ V+W MV GYV + EA++ F M
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML 281
Query: 178 -YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ V+ + LV ++SACA LG + W+ + + +N + +ALIDMY+KCG
Sbjct: 282 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSN--ISTALIDMYAKCG 339
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
ID A R+F G+ +R++ +++SMI G +MHG + F +M+ KP+ +T +GVL
Sbjct: 340 RIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLN 399
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
CSH GL +G+ P +HY C++DLLGRAG LE A + ++ MP+EP+
Sbjct: 400 GCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDV 459
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGMWDDVSRVRRL 403
W ALL AC+IH + ++ + NH+ EL P G Y++LSN+YAS G W+ V++VR+
Sbjct: 460 VAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKA 519
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLR 462
+ G + PG SW+E D GV+HEF A D HP +EI + L ++L R+ + GY P+ +
Sbjct: 520 MSQRGSEGCPGCSWIEID-GVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTK 578
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
VL+D+++E+K++ + HSEKLA+AFGLL+T G T+RI KNLR CEDCH M S V
Sbjct: 579 QVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEG-TIRITKNLRTCEDCHSAMKTISLVF 637
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
REIVVRD RFH F+ G CSC +YW
Sbjct: 638 NREIVVRDRSRFHTFRYGNCSCTDYW 663
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/590 (38%), Positives = 337/590 (57%), Gaps = 56/590 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
+F + F+ LIR L S+ + +RR+ + P SFT + KA
Sbjct: 58 LFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSR 117
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G Q+H+Q GF + ++VG T+I MY +CG G +R+VFDEM E +VV+W ++
Sbjct: 118 HLRPGIQLHSQA-FRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVL 176
Query: 127 VA-------------------------------YANNGDMESAGGLFNELPLKDKVAWTA 155
A YA G++ A +F E+PL+D+V+W+
Sbjct: 177 TAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWST 236
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ G+ N EA +F + + T+ V+L GV+SACAQ G ++ + E +G
Sbjct: 237 MIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG 296
Query: 216 F---GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHA 271
F G +NN ALID YSKCG++ A +F M R++ S++S+I G AMHG
Sbjct: 297 FLYVGSVNN-----ALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEE 351
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMV 319
AIQLF +M ++ +P+G+TFI +L ACSH GL YG+ P+ +HY CMV
Sbjct: 352 AIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMV 411
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
DL GRA L++A + + +MPV PN +W LLGAC IH N E+A++ L E++PD G
Sbjct: 412 DLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSG 471
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
++++LSN+YA AG W DVS +RR + +KK PG+S +E D+ VI+ F AG+ + +
Sbjct: 472 DHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDK-VIYGFVAGEKPNEVTE 530
Query: 440 EIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGAT 498
E + L +++ RL+ + GY P LRSVL+D+ +EEK+ + HSEKLA AFG+ G
Sbjct: 531 EAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRI 590
Query: 499 VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH M S+V EI+VRD RFH F+DG CSC +YW
Sbjct: 591 LRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 350/620 (56%), Gaps = 80/620 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F++++ ++ W +I+ Y+ D I L+ + E + P +FTL + K C
Sbjct: 65 YARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCA 123
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD----------- 112
+ V G+QIH + +G F SD++V +++ MY KCG + C+RKVFD
Sbjct: 124 RLGVVQEGKQIHGLALKIG-FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWN 182
Query: 113 --------------------EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
EMPERD SWT L+ + G +ESA LF+++P ++ V+
Sbjct: 183 SLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS 242
Query: 153 WTAMVTGYVQNAKPREAIEYFERM----------QYAGVETD------------------ 184
W AM+ GY+++ A+E F +M AG E +
Sbjct: 243 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 302
Query: 185 ---YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ TLV V+SA + L V+ W+ E +GF + ++G++LI+MY+KCG I+ A
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFEL--DGILGTSLIEMYAKCGCIESA 360
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++++ V ++++I+G +HG A+ A+ LF +M KT KPN + FIGVL AC+H
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL Y + P+ +HY C+VD+L RAG LEEA +E MP+ PN +W +
Sbjct: 421 GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 480
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLG + H +I + AA + E+ P+ IG YI+LSN+YA++GMW+ VS VR ++ G
Sbjct: 481 LLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 540
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K+PG S +E +G +HEF GD++HP + EI + ++ ++L+ G+ P+ VL +
Sbjct: 541 RKDPGCSSVE-HKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIE 599
Query: 470 DE-EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
E EK+ L HSE+LA+AFGL+ PG +RIMKNLR+C DCH S++ REI+V
Sbjct: 600 GEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIV 659
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RDN RFHHF++G CSC +YW
Sbjct: 660 RDNCRFHHFKNGSCSCMDYW 679
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 123 TELIVAYANN--GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ L+ Y++ D+ A +F+ + + + W ++ YV+N + I F + +
Sbjct: 49 SRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEY 108
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ ++ TL VI CA+LGV++ + +A GFG ++V V +L++MYSKCG ID
Sbjct: 109 LPDNF-TLPCVIKGCARLGVVQEGKQIHGLALKIGFG--SDVFVQGSLVNMYSKCGEIDC 165
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F GM ++V ++S+I G+A G A+QLF +M + + V G L+ C
Sbjct: 166 ARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDG-LSKCGK 224
Query: 301 V--GLKCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMPV 340
V K + P + + M++ ++G + AL++ +MP+
Sbjct: 225 VESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPI 268
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/474 (43%), Positives = 304/474 (64%), Gaps = 15/474 (3%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D+++ N M+ YV + +RKVFD MP RD+VSW +I YA G++ A +F+
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D +W++M++ Y ++ + +EA+E + M A + D +TLV V+SAC+ LG +
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V E + ++ +G+ALIDMY+KCG I+ A R+F M +++V ++SSMI+G A H
Sbjct: 142 VHRFVESNRIEL--DLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANH 199
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDH 314
G H ++ LF M+ KPNGVTF+GVL AC+HVGL + +G+ P+ +H
Sbjct: 200 GLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEH 259
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y CMVDLLGR+G +EEA +++ M EP+ +W ALLGAC+IH+N EIA+ A L L+
Sbjct: 260 YGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLD 319
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT 434
P G+Y++LSNIYA A W+ V+ +R+ ++ +++ PG S +E D IHEF +GD
Sbjct: 320 PLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEK-IHEFVSGDRL 378
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS 494
HP S EI + L +++DRL+ GY+P VL D+ ++ K+R L HSEKLA+AF LLTT
Sbjct: 379 HPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTP 438
Query: 495 PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+T+RI KNLR CEDCH M S V R+++VRD RFHHF +G+CSC +YW
Sbjct: 439 ARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+ + ++ F W+++I Y K+++ L+ M I P TL ++ AC+
Sbjct: 72 LAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACS 131
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +++G ++H + + DL +G +I MY KCG + +++VFD MPE+DV +W+
Sbjct: 132 DLGALAVGAEVH-RFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWS 190
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+ AN+G G+ E++ F +M G++
Sbjct: 191 SMIIGLANHG------------------------LGH-------ESLSLFSKMISEGMKP 219
Query: 184 DYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT VGV+ AC +G++ + + E G P V ++D+ + G +++A
Sbjct: 220 NGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEP--TVEHYGCMVDLLGRSGHVEEAR 277
Query: 243 RIFVGM 248
++ M
Sbjct: 278 QLIRSM 283
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 76/177 (42%), Gaps = 43/177 (24%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG--------- 267
P+ +V + + ++ Y + +A ++F GM R++ S+++MI G+AM G
Sbjct: 18 APLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIF 77
Query: 268 ----------------------RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
R+ A++L+ +M P+ +T + V++ACS +G
Sbjct: 78 DGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALA 137
Query: 306 YG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + ++D+ + G +E A ++ ++MP E + W +++
Sbjct: 138 VGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMP-EKDVQTWSSMI 193
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ K+ W+++I G G +S+SL+ M EG+ P T + ACT V
Sbjct: 177 VFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGL 236
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
VS G++ + G + M+ + + G + +R++ M E D + W L+
Sbjct: 237 VSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296
Query: 127 VAYANNGDMESAGGLFNELPLKD 149
A + ++E A +L + D
Sbjct: 297 GACRIHKNVEIAEEAMAKLRVLD 319
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/557 (38%), Positives = 321/557 (57%), Gaps = 47/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F + K WTA+I G I L++ L+ M+ E I P T+ +L C
Sbjct: 250 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECG 309
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG+Q+HA IL GF+ L + ++ MY KC
Sbjct: 310 FTGALQLGKQLHAY-ILRNGFSVSLALATALVDMYGKCS--------------------- 347
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
D+ +A LF+ +D + WTAM++ Y Q +A F++M+ +GV
Sbjct: 348 ----------DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT+V ++S CA G + WV + + ++ +AL+DMY+KCG I+ A R
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV--DCILNTALVDMYAKCGDINAAGR 455
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F+ R++ ++++I GFAMHG A+ +F +M + KPN +TFIG+L ACSH GL
Sbjct: 456 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 515
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G+ P +HY CMVDLLGRAG L+EA +M++ MP++PN VWGAL+
Sbjct: 516 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++H+NP++ ++AA L E+EP+ G +++SNIYA+A W D + VR+ +K G+KK
Sbjct: 576 AACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKK 635
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG+S +E + G +HEF GD +HP I + L ++ +L GY P+ +VL ++ +E
Sbjct: 636 EPGHSVIEVN-GTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEE 694
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ L HSEKLA+AFGL++T+P +RI+KNLR+C DCH S++ GR I+VRD
Sbjct: 695 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 754
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSCG+YW
Sbjct: 755 NRFHHFREGYCSCGDYW 771
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 46/314 (14%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
+F ++ KAC +V LG++IH +L G D++VGN ++ MY +C + +R VF
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHG-FVLKKGLDRDVFVGNALMLMYGECACVEYARLVF 152
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D+M ERDVVSW+ +I + + N + + A L E+
Sbjct: 153 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNF------------------------ 188
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALID 230
MQ E V++V + + A + + K + +V + G V +AL+D
Sbjct: 189 ----MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG----VPTTTALLD 240
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY+KCG + A ++F G+ Q+ V S+++MI G R +LF M + PN +T
Sbjct: 241 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEIT 300
Query: 291 FIGVLTACSHVG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+ ++ C G L Y G S S +VD+ G+ + A + +
Sbjct: 301 MLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQ 360
Query: 340 VEPNGGVWGALLGA 353
+ +W A+L A
Sbjct: 361 -NRDVMIWTAMLSA 373
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/544 (39%), Positives = 325/544 (59%), Gaps = 18/544 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHA--- 76
W A+I GY +G ++ ++ M I FT +++ C LG+++HA
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
+T+ + V N +I Y KCG + ++++F++MPERD+VSW ++ Y N M+
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMD 376
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A FNE+P K+ ++W M++G Q EA+++F RM+ G E G I +C+
Sbjct: 377 EAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCS 436
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
LG +K+ + A+ +G +++ G+ALI MY++CG +D A+ +F+ M + S+
Sbjct: 437 VLGSLKHGRQLH--AQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISW 494
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
++MI HG+ AI+LF +M+K P+ ++F+ V++ACSH GL
Sbjct: 495 NAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHN 554
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
YGV+P +HYA ++DLL RAG EA +++E MP EP +W ALL C+IH N ++
Sbjct: 555 VYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGI 614
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AA LFEL+P G Y++LSN+YA AG W+D+++VR+L++ G+KK PG SW+E + V
Sbjct: 615 EAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKV 674
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
H F GD HP +I L L+ ++ GY P+ + VL+DV + K+ L THSEKL
Sbjct: 675 -HSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKL 733
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+A+G + GATVR+ KNLRIC DCH S+V+GREIVVRD RFHHF+DGKCSC
Sbjct: 734 AVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSC 793
Query: 545 GNYW 548
G+YW
Sbjct: 794 GDYW 797
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 179/428 (41%), Gaps = 60/428 (14%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG-QQ 73
++ + A+I Y +I L+C M+R+ P ++T +++ A V + QQ
Sbjct: 110 RDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQ 169
Query: 74 IHAQTILLG-GFTSDLYVGNTMIGMYVKCG---------FLGCSRKVFDEMPERDVVSWT 123
+H + G GF + V N +I YVKC + +RK+FDEMP RD +SWT
Sbjct: 170 LHCAVVKSGTGFVTS--VLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWT 227
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y N D+++A N K VAW AM++GY EA E F +M + ++
Sbjct: 228 TIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQL 287
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV--VGSALIDMYSKCGSIDDA 241
D T VIS CA G + + + P +V V +ALI Y KCG +D A
Sbjct: 288 DEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIA 347
Query: 242 YRIFVGMKQR-------------------------------NVFSYSSMILGFAMHGRAH 270
IF M +R N+ S+ MI G A G A
Sbjct: 348 QEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAE 407
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
A++ F M +P F G + +CS H + YG S ++
Sbjct: 408 EALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALI 467
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDK 377
+ R G ++ A + MP + W A++ A H + + ++ L E + PD+
Sbjct: 468 TMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDR 526
Query: 378 IGNYIILS 385
I ++S
Sbjct: 527 ISFLTVIS 534
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 174/405 (42%), Gaps = 69/405 (17%)
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ SL + +HA I GF ++ N +I +Y K L +R +FDE+P+ D+V+ T L
Sbjct: 27 ISYSLARPVHAHMIA-SGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTL 85
Query: 126 IVAYANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
I AY+ GD++ + +F++ PL +D V + AM+T Y N AIE F MQ
Sbjct: 86 IAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRP 145
Query: 184 DYVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS----- 237
D T V+ A A + K+ + SG G + +V+ +ALI Y KC +
Sbjct: 146 DNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVL--NALISSYVKCAASPSAQ 203
Query: 238 ----IDDAYRIFVGMKQRNVFSYSSMILGFA--------------------------MHG 267
+ +A ++F M R+ S++++I G+ + G
Sbjct: 204 SSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISG 263
Query: 268 RAH-----AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY------- 315
AH A ++F M+ ++ + + TF V++ C++ G C+ + Y
Sbjct: 264 YAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAG--CFRLGKEMHAYFLKTVAN 321
Query: 316 ----------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
++ + G ++ A ++ KMP E + W +L + N
Sbjct: 322 PAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDE 377
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
A + E+ I ++II+ + A G ++ + +K+ G +
Sbjct: 378 AKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFE 422
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 50/290 (17%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F ++ KN W +I G G ++++ + M+ +G P + + +C+ + +
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+Q+HAQ + G+ S L GN +I MY +CG + + +F MP D +SW +I A
Sbjct: 442 KHGRQLHAQVVRY-GYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAA 500
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+G + +AIE FE M G+ D ++
Sbjct: 501 LGQHG-------------------------------QGTQAIELFEEMLKEGILPDRISF 529
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG--------SALIDMYSKCGSIDD 240
+ VISAC+ G++K EG + + V G + +ID+ + G +
Sbjct: 530 LTVISACSHAGLVK---------EGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSE 580
Query: 241 AYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
A + M + + +++ G +HG I+ + + + + +G
Sbjct: 581 AKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGT 630
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 333/558 (59%), Gaps = 17/558 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ ++VF+ + FLW +IRG+ + S+ LY M ++T +L KAC+
Sbjct: 96 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACS 155
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + QIHAQ LG + +D+Y N++I Y G + +FD +P+ D VSW
Sbjct: 156 NLSALEETTQIHAQITKLG-YENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWN 214
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA G M+ A LF ++ K+ ++WT M++GYVQ +EA++ F MQ + VE
Sbjct: 215 SVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEP 274
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+L +SACAQLG ++ W+ + + V+G LIDMY+KCG + +A
Sbjct: 275 DNVSLANALSACAQLGALEQGKWIHSYLTKTRIR--MDSVLGCVLIDMYAKCGDMGEALE 332
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F +++++V +++++I G+A HG AI F +M K KPN +TF VLTACS+ GL
Sbjct: 333 VFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGL 392
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P+ +HY C+VDLL RAG L+EA + +++MP++PN +WGALL
Sbjct: 393 VEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALL 452
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH+N E+ + L ++P G Y+ +NI+A WD + RRL+K G+ K
Sbjct: 453 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAK 512
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG S + + G HEF AGD +HP +IQ + +L+ +GY P L +L D+ D+
Sbjct: 513 VPGCSTISLE-GTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDD 571
Query: 472 E-KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+ ++ I+ HSEKLA+ +GL+ T PG T+RIMKNLR+C+DCH S++ R+IV+RD
Sbjct: 572 DERETIVHQHSEKLAITYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRD 631
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DGKCSCG+YW
Sbjct: 632 RTRFHHFRDGKCSCGDYW 649
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 323/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + WTALI Y+ G L++++ + + G+ P SFT + AC + D
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ + + G ++V + +YVKCG + +R+V
Sbjct: 643 LATGETVW-RAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV----------------- 684
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F+++ KD VAW AMV GY N PREA++ F MQ G++ D
Sbjct: 685 --------------FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 730
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G +SAC +LG + + + F ++N V+G+ALIDMY+KCGS +A+ +F
Sbjct: 731 VAGALSACTRLGALDLGRQAIRMVDWDEF--LDNPVLGTALIDMYAKCGSTVEAWVVFQQ 788
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++++ +++MILG M G A L G M K+ K N TFIG+L +C+H GL
Sbjct: 789 MRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDG 848
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y +SP +HY CMVDLL RAG L+EA ++V+ MP+ N + GALLG C+
Sbjct: 849 RRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCK 908
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN E+A+ L LEP GNY++LSNIY++ G W+D +++R +K G++K P
Sbjct: 909 IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPAC 968
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEFR GD +HP S +I + L +L ++ GY+P V++DV DEEK+
Sbjct: 969 SWVEFE-GKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEH 1027
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AF LL T PG T+R+ KNLR+C DCH + S++ REI+VRDN RFH
Sbjct: 1028 TLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFH 1087
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 1088 CFRDGSCSCNDYW 1100
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 50 PVSFTLSALFKACTEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P T+ K+ + + + G+Q+HA+++ L T+ +V +++ +Y KCG L ++
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNP-HVLTSLLSLYAKCGLLHRAQ 581
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+V F+E+P V WTA++T Y+ RE
Sbjct: 582 RV-------------------------------FDEMPHPSTVPWTALITAYMDAGDLRE 610
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
A+ G+ D T V V++ACA++ + V AE G +V V +A
Sbjct: 611 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA--QSVFVATAA 668
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+D+Y KCG + A +F M+ ++ ++ +M+ G+A +G A+ LF M KP+
Sbjct: 669 VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDC 728
Query: 289 VTFIGVLTACSHVG 302
G L+AC+ +G
Sbjct: 729 YAVAGALSACTRLG 742
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 53/291 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++++K+ W A++ GY GH ++++ L+ +M+ EG+ P + ++ ACT +
Sbjct: 682 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 741
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q + + F + +G +I MY KCG + VF +M ++D++ W +
Sbjct: 742 GALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 800
Query: 126 I----------VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE- 174
I +A+A G ME +G N+ + + TG +Q+ + YF
Sbjct: 801 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC-SCTHTGLIQDGR-----RYFHN 854
Query: 175 ---------RMQYAGVETDYVTLVGVISACAQL--GVIKYANWV--------CEIAEGSG 215
R+++ G D ++ G++ QL + AN V C+I +
Sbjct: 855 MTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTE 914
Query: 216 FG-----------PIN--NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
P N N V+ L ++YS G +DA ++ + MK + V
Sbjct: 915 LAEHVLKQLILLEPWNSGNYVM---LSNIYSNRGRWEDAAKLRLDMKAKGV 962
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V ++L+ +Y+KCG + A R+F M + ++++I + G A+ + +
Sbjct: 559 TNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNA 618
Query: 280 VKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACMVDLLGRAGCL 328
+P+ T + VLTAC+ + + GV+ S VDL + G +
Sbjct: 619 FANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEM 678
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+A ++ +KM + WGA++G + +P A
Sbjct: 679 AKAREVFDKMR-HKDAVAWGAMVGGYASNGHPREA 712
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 323/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + + WTALI Y+ G L++++ + + G+ P SFT + AC + D
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ G+ + + G ++V + +YVKCG + +R+V
Sbjct: 667 LATGETVW-RAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV----------------- 708
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F+++ KD VAW AMV GY N PREA++ F MQ G++ D
Sbjct: 709 --------------FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 754
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G +SAC +LG + + + F ++N V+G+ALIDMY+KCGS +A+ +F
Sbjct: 755 VAGALSACTRLGALDLGRQAIRMVDWDEF--LDNPVLGTALIDMYAKCGSTVEAWVVFQQ 812
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++++ +++MILG M G A L G M K+ K N TFIG+L +C+H GL
Sbjct: 813 MRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDG 872
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y +SP +HY CMVDLL RAG L+EA ++V+ MP+ N + GALLG C+
Sbjct: 873 RRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCK 932
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN E+A+ L LEP GNY++LSNIY++ G W+D +++R +K G++K P
Sbjct: 933 IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPAC 992
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEFR GD +HP S +I + L +L ++ GY+P V++DV DEEK+
Sbjct: 993 SWVEFE-GKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEH 1051
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AF LL T PG T+R+ KNLR+C DCH + S++ REI+VRDN RFH
Sbjct: 1052 TLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFH 1111
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 1112 CFRDGSCSCNDYW 1124
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 50 PVSFTLSALFKACTEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P T+ K+ + + + G+Q+HA+++ L T+ +V +++ +Y KCG L ++
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNP-HVLTSLLSLYAKCGLLHRAQ 605
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+V F+E+P V WTA++T Y+ RE
Sbjct: 606 RV-------------------------------FDEMPHPSTVPWTALITAYMDAGDLRE 634
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
A+ G+ D T V V++ACA++ + V AE G +V V +A
Sbjct: 635 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA--QSVFVATAA 692
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+D+Y KCG + A +F M+ ++ ++ +M+ G+A +G A+ LF M KP+
Sbjct: 693 VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDC 752
Query: 289 VTFIGVLTACSHVG 302
G L+AC+ +G
Sbjct: 753 YAVAGALSACTRLG 766
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 53/291 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++++K+ W A++ GY GH ++++ L+ +M+ EG+ P + ++ ACT +
Sbjct: 706 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 765
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q + + F + +G +I MY KCG + VF +M ++D++ W +
Sbjct: 766 GALDLGRQA-IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 824
Query: 126 I----------VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE- 174
I +A+A G ME +G N+ + + TG +Q+ + YF
Sbjct: 825 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC-SCTHTGLIQDGR-----RYFHN 878
Query: 175 ---------RMQYAGVETDYVTLVGVISACAQL--GVIKYANWV--------CEIAEGSG 215
R+++ G D ++ G++ QL + AN V C+I +
Sbjct: 879 MTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTE 938
Query: 216 FG-----------PIN--NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
P N N V+ L ++YS G +DA ++ + MK + V
Sbjct: 939 LAEHVLKQLILLEPWNSGNYVM---LSNIYSNRGRWEDAAKLRLDMKAKGV 986
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V ++L+ +Y+KCG + A R+F M + ++++I + G A+ + +
Sbjct: 583 TNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNA 642
Query: 280 VKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACMVDLLGRAGCL 328
+P+ T + VLTAC+ + + GV+ S VDL + G +
Sbjct: 643 FANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEM 702
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+A ++ +KM + WGA++G + +P A
Sbjct: 703 AKAREVFDKMR-HKDAVAWGAMVGGYASNGHPREA 736
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 341/592 (57%), Gaps = 54/592 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N + +IR Y+ D + ++ M G P ++T + KAC+
Sbjct: 73 RKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS 132
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G IH +L G +L+VGN +I MY KCG L +R+VFDEM +DVVSW +
Sbjct: 133 ENLRYGLLIHGD-VLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191
Query: 126 IVAYANN----------GDMESAG---------------------------GLFNELPLK 148
+ YA+N +ME G +F L K
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERK 251
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ ++W M+ Y++N+ P +A++ + +M+ VE D +T V+ AC L + +
Sbjct: 252 NLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIH 311
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E E P N+++ ++LIDMY++CG +DDA R+F MK R+V S++S+I + M G+
Sbjct: 312 EYVEKKKLCP--NLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQ 369
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYA 316
A+ LF +M+ + P+ + F+ +L+ACSH GL Y ++P +HYA
Sbjct: 370 GCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYA 429
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
C+VDLLGRAG ++EA ++++MP+EPN VW LL +C++ N +I +AA++L +L P+
Sbjct: 430 CLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPE 489
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W +V+ +R ++K ++K PG S +E + V H F AGD +HP
Sbjct: 490 QSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQV-HTFLAGDTSHP 548
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
S EI + LG L+ +++ GY P S L+DV +E+K+ L HSEKLA+ F LL T
Sbjct: 549 QSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE- 607
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI KNLR+C DCH+ S+++ REI+VRD RFHHF+DG CSCG+YW
Sbjct: 608 YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 65/375 (17%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
I + + L KA + D+ +++H L + +G ++ Y CG G +
Sbjct: 14 IQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNP-SLGIKLMRSYAACGEPGLT 72
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
RKVFDEM +R+V V + M+ YV N +
Sbjct: 73 RKVFDEMSDRNV-------------------------------VFYNVMIRSYVNNHRYD 101
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
+ + F M G D T V+ AC+ ++Y + + G N+ VG+
Sbjct: 102 DGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIH--GDVLKVGLDFNLFVGNG 159
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI MY KCG + +A R+F M ++V S++SM+ G+A + R A+++ +M KP+
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219
Query: 288 GVTFIGVLTACSHVG----LKCYGVSPSTDH-----YACMVDLLGRAGCLEEALKM---V 335
G T ++ A ++ L + + + + M+ + + +A+ + +
Sbjct: 220 GCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQM 279
Query: 336 EKMPVEPNGGVWGALLGAC----------QIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
EK VEP+ + ++L AC +IH E ++ N L E N +I
Sbjct: 280 EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLE-------NSLI-- 330
Query: 386 NIYASAGMWDDVSRV 400
++YA G DD RV
Sbjct: 331 DMYARCGCLDDAKRV 345
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 329/556 (59%), Gaps = 28/556 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF ++ +N WT LI G + S+ L+ MR E + F L+ L C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ LG+Q+H+ L G + V N++I +Y KCG L + VF M ERD+VSWT +
Sbjct: 385 MDLCLGRQLHS-LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
I AY+ G++ A F+ + ++ + W AM+ Y+Q+ + ++ + M V D
Sbjct: 444 ITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA +G K + + I G I NV V +A I MYSKCG I +A ++
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQI--IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++V S+++MI G++ HG A + F DM+ KP+ ++++ VL+ CSH GL
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLV 621
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+SP +H++CMVDLLGRAG L EA +++KMP++P VWGALL
Sbjct: 622 QEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLS 681
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+A++AA H+FEL+ G+Y++L+ IY+ AG DD ++VR+L++ G+KKN
Sbjct: 682 ACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 741
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E + V H F+A D++HP I+ L +L++++ GY +R+ E
Sbjct: 742 PGYSWMEVENKV-HVFKADDVSHPQVIAIRNKLDELMEKIAHLGY---VRT--------E 789
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
R + HSEKLA+AFG+++ + IMKNLRIC DCH + S V RE V+RD +
Sbjct: 790 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 849
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 850 RFHHFKSGSCSCGDYW 865
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F+++ ++ W L+ GY D + + SM R G P +FT + K+C +
Sbjct: 93 LFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG 152
Query: 67 DVSLGQQIHAQTILLG-----GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
L Q LLG F D V ++ M+V+CG++ + ++F ++ +
Sbjct: 153 CRELAPQ------LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 206
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
++ YA ++ A F ++ +D V+W M+ Q+ + REA+ M GV
Sbjct: 207 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 266
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T ++ACA+L + + + S P + V SALI++Y+KCGS +A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS--LPQIDPYVASALIELYAKCGSFKEA 324
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
R+F ++ RN S++ +I G + +++LF M
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 38/289 (13%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + ++ W +I G +++++ L M R+G+ S T ++ AC + +
Sbjct: 227 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 286
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+Q+HA KV +P+ D + LI
Sbjct: 287 GWGKQLHA--------------------------------KVIRSLPQIDPYVASALIEL 314
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
YA G + A +FN L ++ V+WT ++ G +Q +++E F +M+ + D L
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+IS C + + + SG +VV ++LI +Y+KCG + +A +F M
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHN--RAIVVSNSLISLYAKCGDLQNAEFVFSSM 432
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+R++ S++SMI ++ G A + F M +T+ N +T+ +L A
Sbjct: 433 SERDIVSWTSMITAYSQIGNIIKAREFFDGM---DTR-NAITWNAMLGA 477
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V+ L+ ++C ++ + +H + + +G S +++ NT++ Y CG L +R++
Sbjct: 3 VTQALADALRSCGSRGALAGARALHGRLVTVG-LASAVFLQNTLLHAYFSCGALSDARRL 61
Query: 111 FD-EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
++ E +V++ ++ YA G + A LF+ +P +D +W +++GY Q + +
Sbjct: 62 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 170 IEYFERMQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
+E F M +G + T V+ +C LG + A + + F + V +AL
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFW--GDPDVETAL 179
Query: 229 IDMYSKCGSIDDAYRIFV-------------------------------GMKQRNVFSYS 257
+DM+ +CG +D A R+F M +R+V S++
Sbjct: 180 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-------- 309
MI + GR A+ L +M + + + T+ LTAC+ + +G
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 299
Query: 310 -PSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P D Y + +++L + G +EA ++ + + N W L+G
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIG 344
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 333/555 (60%), Gaps = 16/555 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ KN ++ ++ Y+ G + + + M ++G P T+ + AC ++
Sbjct: 278 REIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQL 337
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+S+G+ HA + G + N +I MY+KCG + KVFD M + VV+W L
Sbjct: 338 GDLSVGKSSHAY-VFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSL 396
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +G++E A +F E+P + V+W M+ VQ + EAI+ MQ G++ D
Sbjct: 397 IAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDR 456
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+VG+ SAC LG + A W+ E + ++ +G+AL+DM+S+CG +A R+F
Sbjct: 457 VTMVGIASACGYLGALDLAKWIYTYIEKNDIHI--DMQLGTALVDMFSRCGDPLNAMRVF 514
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M++R+V ++++ I A+ G A AI+LF +M+K + K + F+ +LTA SH G
Sbjct: 515 ENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVD 574
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +GVSP HY CMVDLLGRAG LEEA +++ MP++PN +WG+ L A
Sbjct: 575 QGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAA 634
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H+N E A A + +L P+K+G +++LSNIYASAG W+DV+RVR +K G +K
Sbjct: 635 CRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVA 694
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E G+I EF +GD +H + +I L ++ R+ GY P+ +VL DV ++EK
Sbjct: 695 GSSSIEV-HGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEK 753
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+A+GL+ T G +R++KNLR+C DCH F S++ GREI VRDN R
Sbjct: 754 EHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNR 813
Query: 534 FHHFQDGKCSCGNYW 548
+H F++G CSC ++W
Sbjct: 814 YHFFKEGFCSCRDFW 828
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 188/402 (46%), Gaps = 50/402 (12%)
Query: 21 TALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
LIRGY G K++I +Y M GI P +FT L AC++++ S G Q+H +
Sbjct: 90 NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 149
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+G DL+V N++I Y CG + RKVFDEM ER+V
Sbjct: 150 KMG-LVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNV-------------------- 188
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
V+WT+++ GY +EA+ F M GVE + VT+V ISACA+L
Sbjct: 189 -----------VSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLK 237
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ VC + + G +N +V +AL+DMY KCG + IF +N+ Y+++
Sbjct: 238 DLELGKKVCNLM--TELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTI 295
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST------- 312
+ + HG A + + +M++ +P+ VT + + AC+ +G G S
Sbjct: 296 MSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGL 355
Query: 313 ---DHYA-CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAAN 368
D+ + ++D+ + G E A K+ + M W +L+ + R+ E+ ++A
Sbjct: 356 ERLDNISNAIIDMYMKCGKREAACKVFDSMS-NKTVVTWNSLIAG--LVRDGEL-ELALR 411
Query: 369 HLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
E+ + ++ + A M+++ + R ++ G+K
Sbjct: 412 IFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIK 453
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 132/274 (48%), Gaps = 34/274 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N WT+LI GY + K+++ L+ M G+ P T+ AC ++
Sbjct: 177 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKL 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ LG+++ L G S+ V N ++ MY+KCG + R++FDE ++++
Sbjct: 237 KDLELGKKVCNLMTEL-GVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNL------ 289
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
V + +++ YVQ+ E + + M G D
Sbjct: 290 -------------------------VMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ I+ACAQLG + +G ++N + +A+IDMY KCG + A ++F
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDN--ISNAIIDMYMKCGKREAACKVF 382
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
M + V +++S+I G G A+++FG+M
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEM 416
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT-----AMVTGYVQNAKPRE 168
M ++ V + +LI A G ES N + + ++ GY + +E
Sbjct: 45 MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 104
Query: 169 AI-EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
AI Y + G+ D T ++SAC++ ++ ++ V G + ++ V ++
Sbjct: 105 AIFIYLHMIIVMGIVPDNFTFPFLLSACSK--IMAFSEGVQVHGVVVKMGLVKDLFVANS 162
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI Y+ CG +D ++F M +RNV S++S+I G+++ A A+ LF +MV+ +PN
Sbjct: 163 LIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPN 222
Query: 288 GVTFIGVLTACSHV 301
VT + ++AC+ +
Sbjct: 223 PVTMVCAISACAKL 236
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 325/557 (58%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N WTA+I Y +G+ ++SL+ M R G P FT + + +C
Sbjct: 113 RHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+QIH+ I L + + +YVG++++ MY K
Sbjct: 173 SGFVLGRQIHSHIIKLN-YEAHVYVGSSLLDMYAK------------------------- 206
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+G + A G+F LP +D V+ TA+++GY Q EA+E F R+Q G++++Y
Sbjct: 207 ------DGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNY 260
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V++A + L + + V S + VV+ ++LIDMYSKCG++ A RIF
Sbjct: 261 VTYTSVLTALSGLAALDHGKQVHNHLLRSEVP--SYVVLQNSLIDMYSKCGNLTYARRIF 318
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLK 304
+ +R V S+++M++G++ HG ++LF M+ + + KP+ VT + VL+ CSH GL+
Sbjct: 319 DTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLE 378
Query: 305 CYG-------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G V P + HY C+VD+LGRAG +E A + V+KMP EP+ +WG LL
Sbjct: 379 DKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLL 438
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC +H N +I + + L ++EP+ GNY+ILSN+YASAG W+DV +R L+ + K
Sbjct: 439 GACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTK 498
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D+ V+H F A D +HP E+ + +L R + GY P+L VL+DV +E
Sbjct: 499 EPGRSWIELDQ-VLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEE 557
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K++IL++HSEKLAL FGL+ T +R++KNLRIC DCH F S++ GRE+ +RD
Sbjct: 558 QKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDK 617
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH GKCSCG+YW
Sbjct: 618 NRFHRIVGGKCSCGDYW 634
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
++ + + REA+ + M G++T++ V++ C + I+ V + + P
Sbjct: 36 HIHDTRLREALLH---MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPC 92
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
V + + LI Y KC S+ DA +F M +RNV S+++MI ++ G A A+ LF M
Sbjct: 93 --VYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQM 150
Query: 280 VKTETKPNGVTFIGVLTAC 298
+++ T+PN TF VLT+C
Sbjct: 151 LRSGTEPNEFTFATVLTSC 169
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 331/554 (59%), Gaps = 28/554 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + +N WT LI G++ G +S+ L+ MR E + F L+ L C +D
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ L G + V N++I MY KC L + +F M E+D+VSWT +I
Sbjct: 387 LCLGRQLHS-LCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMIT 445
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYV 186
A++ G++ A F+ + K+ + W AM+ Y+Q+ + + + M V D+V
Sbjct: 446 AHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWV 505
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V + CA LG K + + I G I + V +A+I MYSKCG I +A ++F
Sbjct: 506 TYVTLFKGCADLGANKLGDQI--IGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFD 563
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ +++ S+++MI G++ HG AI++F D++K KP+ ++++ VL+ CSH GL
Sbjct: 564 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + +SP +H++CMVDLLGRAG L EA ++++MP++P VWGALL AC
Sbjct: 624 GKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSAC 683
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N E+A++AA H+FEL+ G+Y++++ IYA AG DD +++R+L++ G+KKNPG
Sbjct: 684 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 743
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
YSW+E + V H F+A D++HP I++ L +L++++ GY +R+ +
Sbjct: 744 YSWMEVNNKV-HVFKADDVSHPQVIAIRKKLDELMEKIARLGY---VRT--------DSP 791
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
R + HSEKLA+AFGL++ + IMKNLRIC DCH + S V GRE V+RD +RF
Sbjct: 792 RSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRF 851
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSCG+YW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
+F ++ ++ W L+ GY S+ + SM R G P +FT + K+C +
Sbjct: 93 LFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALG 152
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ SL Q+ G D V ++ M+V+CG + + ++F + E + ++
Sbjct: 153 ERSLALQLLGMVQKFGS-QDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSML 211
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V Y ++ A LF+ +P +D V+W MV+ Q+ + REA++ MQ GV D
Sbjct: 212 VGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDST 271
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T ++ACA+L +++ + A+ P + V SAL+++Y+KCG +A +F
Sbjct: 272 TYTSSLTACARLSSLRWGKQLH--AQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFN 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+ RN +++ +I GF HG +++LF M
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM 362
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 141/314 (44%), Gaps = 47/314 (14%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERDVVSWTELIVAYANNGDMESAGGL 141
G S +++ NT++ Y+ CG L +R++ ++ +V++ ++ Y G + A L
Sbjct: 34 GLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVEL 93
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-DYVTLVGVISACAQLGV 200
F +P +D +W +++GY Q+ + ++E F M +G + + T + +C LG
Sbjct: 94 FGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGE 153
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
A + + + FG ++ V +AL+DM+ +CG++D A R+FV +K+ +F +SM+
Sbjct: 154 RSLALQLLGMVQ--KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSML 211
Query: 261 LGF-------------------------------AMHGRAHAAIQLFGDMVKTETKPNGV 289
+G+ + GR A+ + DM + +
Sbjct: 212 VGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDST 271
Query: 290 TFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDLLGRAGCLEEALKMVEKM 338
T+ LTAC+ + +G P D Y + +V+L + GC +EA + +
Sbjct: 272 TYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSL 331
Query: 339 PVEPNGGVWGALLG 352
+ N W L+
Sbjct: 332 H-DRNNVAWTVLIA 344
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 43/306 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W ++ G +++++ + M+ +G+ S T ++ AC +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HAQ ++ D YV + ++ +Y KCG F E
Sbjct: 286 LRWGKQLHAQ-VIRNLPCIDPYVASALVELYAKCG-------CFKE-------------- 323
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A G+FN L ++ VAWT ++ G++Q+ E++E F +M+ + D
Sbjct: 324 ----------AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFA 373
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +IS C + + + S G I VVV ++LI MY+KC ++ A IF
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKS--GQIQAVVVSNSLISMYAKCDNLQSAESIFRF 431
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHVG 302
M ++++ S++SMI + G A + F M + N +T+ +L A G
Sbjct: 432 MNEKDIVSWTSMITAHSQVGNIAKAREFFDGM----STKNVITWNAMLGAYIQHGAEEDG 487
Query: 303 LKCYGV 308
L+ Y V
Sbjct: 488 LRMYNV 493
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R F+ + KN W A++ YI G +D + +Y M E + P T LFK C +
Sbjct: 457 REFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCAD 516
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG QI +T+ + G D V N +I MY KCG + +RKVFD + +D+VSW
Sbjct: 517 LGANKLGDQIIGRTVKV-GLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 575
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I TGY Q+ ++AIE F+ + G + D
Sbjct: 576 MI-------------------------------TGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDD 240
Y++ V V+S C+ G+++ ++ + ++N+ G S ++D+ + G + +
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKSYFDMMK-----RVHNISPGLEHFSCMVDLLGRAGHLTE 659
Query: 241 A 241
A
Sbjct: 660 A 660
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I GY G K +I ++ + + G P + A+ C+
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 618
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS-WTE 124
V G+ + + L + M+ + + G L ++ + DEMP + W
Sbjct: 619 GLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGA 678
Query: 125 LIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + NN E A EL D ++ M Y K ++ + + M+ G+
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 182 ETD 184
+ +
Sbjct: 739 KKN 741
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 329/556 (59%), Gaps = 28/556 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF ++ +N WT LI G + S+ L+ MR E + F L+ L C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ LG+Q+H+ L G + V N++I +Y KCG L + VF M ERD+VSWT +
Sbjct: 385 MDLCLGRQLHS-LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
I AY+ G++ A F+ + ++ + W AM+ Y+Q+ + ++ + M V D
Sbjct: 444 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA +G K + + I G I NV V +A I MYSKCG I +A ++
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQI--IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++V S+++MI G++ HG A + F DM+ KP+ ++++ VL+ CSH GL
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLV 621
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+SP +H++CMVDLLGRAG L EA +++KMP++P VWGALL
Sbjct: 622 QEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLS 681
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+A++AA H+FEL+ G+Y++L+ IY+ AG DD ++VR+L++ G+KKN
Sbjct: 682 ACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 741
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E + V H F+A D++HP I+ + +L++++ GY +R+ E
Sbjct: 742 PGYSWMEVENKV-HVFKADDVSHPQVIAIRNKMDELMEKIAHLGY---VRT--------E 789
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
R + HSEKLA+AFG+++ + IMKNLRIC DCH + S V RE V+RD +
Sbjct: 790 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 849
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 850 RFHHFKSGSCSCGDYW 865
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F+++ ++ W L+ GY D + + SM R G P +FT + K+C +
Sbjct: 93 LFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG 152
Query: 67 DVSLGQQIHAQTILLG-----GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
L Q LLG F D V ++ M+V+CG++ + ++F ++ +
Sbjct: 153 CRELAPQ------LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 206
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
++ YA ++ A F ++ +D V+W M+ Q+ + REA+ M GV
Sbjct: 207 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 266
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T ++ACA+L + + + S P + V SALI++Y+KCGS +A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS--LPQIDPYVASALIELYAKCGSFKEA 324
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
R+F ++ RN S++ +I G + +++LF M
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 38/289 (13%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + ++ W +I G +++++ L M R+G+ S T ++ AC + +
Sbjct: 227 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 286
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+Q+HA KV +P+ D + LI
Sbjct: 287 GWGKQLHA--------------------------------KVIRSLPQIDPYVASALIEL 314
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
YA G + A +FN L ++ V+WT ++ G +Q +++E F +M+ + D L
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+IS C + + + SG +VV ++LI +Y+KCG + +A +F M
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHN--RAIVVSNSLISLYAKCGDLQNAEFVFSSM 432
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+R++ S++SMI ++ G A + F M N +T+ +L A
Sbjct: 433 SERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGA 477
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 154/346 (44%), Gaps = 48/346 (13%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V+ L+ ++C ++ + +H + + +G S +++ NT++ Y+ CG L +R++
Sbjct: 3 VTQALADALRSCGSRGALAGARALHGRLVTVG-LASAVFLQNTLLHAYLSCGALSDARRL 61
Query: 111 FD-EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
++ E +V++ ++ YA G + A LF+ +P +D +W +++GY Q + +
Sbjct: 62 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 170 IEYFERMQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
+E F M +G + T V+ +C LG + A + + F + V +AL
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFW--GDPDVETAL 179
Query: 229 IDMYSKCGSIDDAYRIFV-------------------------------GMKQRNVFSYS 257
+DM+ +CG +D A R+F M +R+V S++
Sbjct: 180 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-------- 309
MI + GR A+ L +M + + + T+ LTAC+ + +G
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 299
Query: 310 -PSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P D Y + +++L + G +EA ++ + + N W L+G
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIG 344
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 329/556 (59%), Gaps = 28/556 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF ++ +N WT LI G + S+ L+ MR E + F L+ L C
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 374
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ LG+Q+H+ L G + V N++I +Y KCG L + VF M ERD+VSWT +
Sbjct: 375 MDLCLGRQLHS-LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 433
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
I AY+ G++ A F+ + ++ + W AM+ Y+Q+ + ++ + M V D
Sbjct: 434 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 493
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA +G K + + I G I NV V +A I MYSKCG I +A ++
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQI--IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++V S+++MI G++ HG A + F DM+ KP+ ++++ VL+ CSH GL
Sbjct: 552 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLV 611
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+SP +H++CMVDLLGRAG L EA +++KMP++P VWGALL
Sbjct: 612 QEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLS 671
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+A++AA H+FEL+ G+Y++L+ IY+ AG DD ++VR+L++ G+KKN
Sbjct: 672 ACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 731
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E + V H F+A D++HP I+ + +L++++ GY +R+ E
Sbjct: 732 PGYSWMEVENKV-HVFKADDVSHPQVIAIRNKMDELMEKIAHLGY---VRT--------E 779
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
R + HSEKLA+AFG+++ + IMKNLRIC DCH + S V RE V+RD +
Sbjct: 780 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 839
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 840 RFHHFKSGSCSCGDYW 855
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+ +K N ++ GY QG L D+ L+ M R + + +S +
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 66 LDV-SLG-QQIHAQTILLG-----GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ +LG +++ Q LLG F D V ++ M+V+CG++ + ++F ++
Sbjct: 136 MSCGALGCRELAPQ--LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 193
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
+ ++ YA ++ A F ++ +D V+W M+ Q+ + REA+ M
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
GV D T ++ACA+L + + + A+ P + V SALI++Y+KCGS
Sbjct: 254 KGVRLDSTTYTSSLTACARLFSLGWGKQLH--AKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+A R+F ++ RN S++ +I G + +++LF M
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 352
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 43/303 (14%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + ++ W +I G +++++ L M R+G+ S T ++ AC + +
Sbjct: 217 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 276
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+Q+HA KV +P+ D + LI
Sbjct: 277 GWGKQLHA--------------------------------KVIRSLPQIDPYVASALIEL 304
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
YA G + A +FN L ++ V+WT ++ G +Q +++E F +M+ + D L
Sbjct: 305 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 364
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+IS C + + + SG +VV ++LI +Y+KCG + +A +F M
Sbjct: 365 ATLISGCFNRMDLCLGRQLHSLCLKSGHN--RAIVVSNSLISLYAKCGDLQNAEFVFSSM 422
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHVGL 303
+R++ S++SMI ++ G A + F M N +T+ +L A GL
Sbjct: 423 SERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGL 478
Query: 304 KCY 306
K Y
Sbjct: 479 KMY 481
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 144/327 (44%), Gaps = 36/327 (11%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V+ L+ ++C ++ + +H + + +G S +++ NT++ Y+ CG L +R++
Sbjct: 19 VTQALADALRSCGSRGALAGARALHGRLVTVG-LASAVFLQNTLLHAYLSCGALSDARRL 77
Query: 111 FD-EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP--- 166
++ E +V++ ++ YA G + A LF+ +P +D +W +++ + A
Sbjct: 78 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMS 137
Query: 167 ------RE----AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
RE + F + + G LV + C G + +A+ + E
Sbjct: 138 CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC---GYVDFASRLFSQIERPTI 194
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
N+++ G Y+K ID A F M +R+V S++ MI + GR A+ L
Sbjct: 195 FCRNSMLAG------YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLV 248
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDLLGRA 325
+M + + + T+ LTAC+ + +G P D Y + +++L +
Sbjct: 249 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 308
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLG 352
G +EA ++ + + N W L+G
Sbjct: 309 GSFKEAKRVFNSLQ-DRNSVSWTVLIG 334
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 323/555 (58%), Gaps = 44/555 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W A+I GY+ ++++ L+ M R + P TL ++ AC +
Sbjct: 169 RKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQS 228
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG++IH GF S L + N IG+Y KCG
Sbjct: 229 GSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG----------------------- 265
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+E A GLF L KD V+W ++ GY +EA+ F+ M +G +
Sbjct: 266 --------DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 317
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ V+ ACA LG I W+ + G N + ++LIDMY+KCG I+ A+++F
Sbjct: 318 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVF 377
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++ S+++MI GFAMHGRA+AA LF M K +P+ +T +G+L+ACSH GL
Sbjct: 378 NSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLD 437
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y ++P +HY CM+DLLG AG +EA +++ MP+EP+G +W +LL A
Sbjct: 438 LGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKA 497
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N E+A+ A L E+EP+ G+Y++LSNIYA+AG W+DV+R+R +L G+KK P
Sbjct: 498 CKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVP 557
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D V+HEF GD HP S EI + L ++ L+ G+ P+ VL ++ +E K
Sbjct: 558 GCSSIEID-SVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWK 616
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AFGL++T PG + ++KNLR+C +CH S++ REIV RD R
Sbjct: 617 EGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTR 676
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 677 FHHFRDGVCSCCDYW 691
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 200/391 (51%), Gaps = 28/391 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + N +W ++RG L + +Y M G P ++T L K+C +
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+QIHAQ + LG D Y ++I MY + G L +RKVFD +RDVVS T LI
Sbjct: 99 FEEGRQIHAQVMKLG-CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALIT 157
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ GD+ SA +F+ + +D V+W AM+TGYV+N EA+E F+ M V D T
Sbjct: 158 GYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGT 217
Query: 188 LVGVISACAQLGVIKYANWVCEIAEG-SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
LV V+SACAQ G I+ + + + GFG +V +A I +YSKCG ++ A +F
Sbjct: 218 LVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIV--NAFIGLYSKCGDVEIASGLFE 275
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
G+ ++V S++++I G+ A+ LF +M+++ PN VT + VL AC+H+G
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 335
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ GV+ + ++D+ + G +E A ++ M + + W A++
Sbjct: 336 GRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFG 394
Query: 354 CQIHRNPEIAQIAANHLFE------LEPDKI 378
+H AA LF +EPD I
Sbjct: 395 FAMHGRAN----AAFDLFSRMRKNGIEPDDI 421
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 326/557 (58%), Gaps = 28/557 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACT 63
R +F+Q+ ++ W +I GY G L + L+ PV FT +A+ A
Sbjct: 208 RQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE------SPVRDVFTWTAMVYAY- 260
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G A+ + N MI Y + + R++F+EMP ++ SW
Sbjct: 261 ----VQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWN 316
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y NGD+ A LF+ +P +D V+W A++ GY QN EA+ M+ G
Sbjct: 317 IMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL 376
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T +SACA + ++ V +G+ +VG+AL+ MY KCG ID+AY
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYE--KGCLVGNALVGMYCKCGCIDEAYD 434
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G++ +++ S+++M+ G+A HG A+ +F M+ KP+ +T +GVL+ACSH GL
Sbjct: 435 VFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGL 494
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K YG++P++ HYACM+DLLGRAGCLEEA ++ MP EP+ WGALL
Sbjct: 495 TDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALL 554
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA +IH N E+ + AA +F++EP G Y++LSN+YA++G W DVS++R ++ G++K
Sbjct: 555 GASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQK 614
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E + IH F GD HP I L +L +++ +GY + + VL+DV +E
Sbjct: 615 TPGYSWVEV-QNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEE 673
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EKK +L HSEKLA+AFG+LT G +R+MKNLR+CEDCH + S+++GR I+VRD+
Sbjct: 674 EKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDS 733
Query: 532 MRFHHFQDGKCSCGNYW 548
R+HHF +G CSC +YW
Sbjct: 734 HRYHHFSEGICSCRDYW 750
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 30/342 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ + K+ W A++ GY+ GH+ ++ ++ M + S + + L A
Sbjct: 115 RMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAY--- 167
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ A+ + +L N ++G YVK LG +R++FD++P RD++SW +
Sbjct: 168 --VRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTM 225
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +GD+ A LF E P++D WTAMV YVQ+ EA F+ M E Y
Sbjct: 226 ISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP-QKREMSY 284
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ + ++ + + E+ E P N+ + +I Y + G + A +F
Sbjct: 285 NVMIAGYAQYKRMDMGR------ELFEEM---PFPNIGSWNIMISGYCQNGDLAQARNLF 335
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M QR+ S++++I G+A +G A+ + +M + N TF L+AC+ +
Sbjct: 336 DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALE 395
Query: 302 -GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVE 336
G + +G T + +V + + GC++EA + +
Sbjct: 396 LGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQ 437
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 35/333 (10%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N MI Y++ +R +FD+MP +D+ SW ++ YA N + A LF+ +P KD V
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W AM++GYV++ EA + F+RM + + ++ G+++A + G ++ A + E
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPH----KNSISWNGLLAAYVRSGRLEEARRLFESK 183
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
N ++ G Y K + DA ++F + R++ S+++MI G+A G
Sbjct: 184 SDWELISCNCLMGG------YVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQ 237
Query: 272 AIQLFGDMVKTETKP--NGVTFIGVLTACSHVGL-----KCYGVSPSTDH--YACMVDLL 322
A +LF E P + T+ ++ A G+ + + P Y M+
Sbjct: 238 ARRLF------EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY 291
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELEP--DKIG 379
+ ++ ++ E+MP PN G W ++ G CQ N ++AQ A +LF++ P D +
Sbjct: 292 AQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQ---NGDLAQ--ARNLFDMMPQRDSVS 345
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
I++ YA G++++ + +K G N
Sbjct: 346 WAAIIAG-YAQNGLYEEAMNMLVEMKRDGESLN 377
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 32/331 (9%)
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
I +++ G + VFD MP R+ VS+ +I Y N A LF+++P KD +W
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
M+TGY +N + R+A F+ M E D V+ ++S + G + A V +
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMP----EKDVVSWNAMLSGYVRSGHVDEARDVFDRM--- 152
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
P N + + L+ Y + G +++A R+F + S + ++ G+ A Q
Sbjct: 153 ---PHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQ 209
Query: 275 LFG-----DMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD--HYACMVDLLGRAGC 327
LF D++ T +G G L+ + + SP D + MV + G
Sbjct: 210 LFDQIPVRDLISWNTMISGYAQDGDLSQAR----RLFEESPVRDVFTWTAMVYAYVQDGM 265
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSN 386
L+EA ++ ++MP + + G Q R LFE P IG++ I+ +
Sbjct: 266 LDEARRVFDEMPQKREMSYNVMIAGYAQYKR-----MDMGRELFEEMPFPNIGSWNIMIS 320
Query: 387 IYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
Y G D+++ R L M + + SW
Sbjct: 321 GYCQNG---DLAQARNLFDM--MPQRDSVSW 346
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/558 (38%), Positives = 341/558 (61%), Gaps = 20/558 (3%)
Query: 7 LVFEQ-VKYKNPFLWTALIRGYILQGHLKDSISLYCS--MRREGIGPVSFTLSALFKACT 63
L+F + + N F + AL++ + +IS + + + P +T +++ KAC
Sbjct: 79 LIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACA 138
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ V GQ++H + G S+L+V N+++ +Y K G ++K+FDEM RDVVSW
Sbjct: 139 GLAQVLEGQKVHC-FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWN 197
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVE 182
LI Y +G ++ A +F+ + K+ V+W+ M++GY +N K +AIE F +MQ+ G+
Sbjct: 198 TLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLA 257
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VTLV V+SACA LG + W+ + + +G+AL DMY+KCG + +A
Sbjct: 258 PNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEV--GLFLGNALADMYAKCGCVLEAK 315
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +R+V S+S +I+G AM+G A+ A F +M++ +PN ++F+G+LTAC+H G
Sbjct: 316 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 375
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YG++P +HY C+VDLL RAG L++A ++ MP++PN VWGAL
Sbjct: 376 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 435
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C+I+++ E + + EL+ + G+ + L+N+YAS G DD + R ++
Sbjct: 436 LGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSM 495
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E + V +EF GD +HP S I + +L +++ GY+P V++++ +
Sbjct: 496 KTPGCSWIEINNSV-YEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDE 554
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L THSEKLALAFGL+ TS G T+RI+KNLR+C DCH + S+++ REIVVRD
Sbjct: 555 EEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRD 614
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DGKCSC +YW
Sbjct: 615 RSRFHHFKDGKCSCNDYW 632
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 37/286 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R+VF+ + KN W+ +I GY D+I L+ M+ E G+ P TL ++ AC
Sbjct: 213 RMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAH 272
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + LG+ IH + I L++GN + MY KCG + ++ VF EM ERDV+SW+
Sbjct: 273 LGALDLGKWIH-RFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSI 331
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I+ A + GY EA +F M G+E +
Sbjct: 332 IIMGLA--------------------------MYGYAN-----EAFNFFAEMIEDGLEPN 360
Query: 185 YVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ +G+++AC G++ K + + + G P + ++D+ S+ G +D A
Sbjct: 361 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITP--KIEHYGCVVDLLSRAGRLDQAES 418
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ M Q NV + +++ G ++ A ++ +++ ++ +G
Sbjct: 419 LINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSG 464
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 318/544 (58%), Gaps = 18/544 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHA--- 76
W A+I GY+ G +++ ++ M GI FT +++ AC G+Q+HA
Sbjct: 259 WNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYIL 318
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
+T L V N + +Y KCG + +R+VF++MP +D+VSW ++ Y N G ++
Sbjct: 319 RTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRID 378
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A F E+P ++ + WT M++G QN E+++ F RM+ G E G I ACA
Sbjct: 379 EAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACA 438
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
L + + + GF +++ G+ALI MY+KCG ++ A+ +F+ M + S+
Sbjct: 439 WLAALMHGRQLHAQLVRLGFD--SSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSW 496
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
++MI HG A++LF M+K + P+ +TF+ VL+ CSH GL
Sbjct: 497 NAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSG 556
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
YG+ P DHYA M+DLL RAG EA M+E MPVEP +W ALL C+IH N ++
Sbjct: 557 LYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AA LFEL P G Y++LSN+YA+ G WDDV++VR+L++ G+KK PG SW+E + V
Sbjct: 617 QAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKV 676
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
H F D+ HP + L +L +++ GY P+ + VL+D+ E+K+ +L THSEKL
Sbjct: 677 -HVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKL 735
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+ FGLL GATVR+ KNLRIC DCH S+V+ REIVVRD RFHHF++G+CSC
Sbjct: 736 AVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSC 795
Query: 545 GNYW 548
GNYW
Sbjct: 796 GNYW 799
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 201/456 (44%), Gaps = 71/456 (15%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL-DVSLGQQ 73
++ + A+I GY +I L+ + R G P +FT +++ A ++ D QQ
Sbjct: 112 RDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ 171
Query: 74 IHAQTILLG-GFTSDLYVGNTMIGMYVKCGF---------LGCSRKVFDEMPERDVVSWT 123
IH + G GF + V N ++ ++VKC + +RK+FDEM ERD +SWT
Sbjct: 172 IHCAVVKSGSGFVTS--VLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWT 229
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y NG++++A + + K VAW AM++GYV + EA+E F +M G++
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289
Query: 184 DYVTLVGVISACAQLGVIKYAN-----------------------------WVC----EI 210
D T V+SACA G + W C E
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEA 349
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ P+ ++V +A++ Y G ID+A F M +RN+ +++ MI G A +G
Sbjct: 350 RQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGE 409
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
+++LF M +P F G + AC+ H L G S ++
Sbjct: 410 ESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALI 469
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE----- 374
+ + G +E A + MP + W A++ A H + AQ A LFEL
Sbjct: 470 TMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGHG--AQ--ALELFELMLKEDI 524
Query: 375 -PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
PD+I +LS + AG+ ++ R + M+GL
Sbjct: 525 LPDRITFLTVLSTC-SHAGLVEEGHRYFK--SMSGL 557
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 72/349 (20%)
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ S+ + +HA I GF Y+ N +I +Y K L + +FDE+ + D+V+ T L
Sbjct: 29 MSYSIARTVHAHMIA-SGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTL 87
Query: 126 IVAYANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
I A+++ G+ A +F PL +D V + AM+TGY N AIE F + G
Sbjct: 88 IAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRP 147
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE------IAEGSGFGPINNVVVGSALIDMYSKC-- 235
D T V+ A L +I C+ + GSGF + +V+ +AL+ ++ KC
Sbjct: 148 DNFTFTSVLGA---LALIVEDEKQCQQIHCAVVKSGSGF--VTSVL--NALLSVFVKCAS 200
Query: 236 --------------------------------------GSIDDAYRIFVGMKQRNVFSYS 257
G +D A + GM ++ V +++
Sbjct: 201 SPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWN 260
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-------- 309
+MI G+ HG A+++F M + + T+ VL+AC++ G +G
Sbjct: 261 AMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320
Query: 310 ---PSTDHYACMVDLLG----RAGCLEEALKMVEKMPVEPNGGVWGALL 351
PS D + + L + G ++EA ++ +MPV+ + W A+L
Sbjct: 321 EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAIL 368
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE++ +N WT +I G G ++S+ L+ M+ EG P + + AC + +
Sbjct: 384 FEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAAL 443
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+Q+HAQ + L GF S L GN +I MY KCG + + +F MP D VSW +I A
Sbjct: 444 MHGRQLHAQLVRL-GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAA 502
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+G +A+E FE M + D +T
Sbjct: 503 LGQHG-------------------------------HGAQALELFELMLKEDILPDRITF 531
Query: 189 VGVISACAQLGVIKYANWVCEIAEG-SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+S C+ G+++ + + G G P + + +ID+ + G +A +
Sbjct: 532 LTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHY--ARMIDLLCRAGKFSEAKDMIET 589
Query: 248 MK-QRNVFSYSSMILGFAMHGRAHAAIQ 274
M + + +++ G +HG IQ
Sbjct: 590 MPVEPGPPIWEALLAGCRIHGNMDLGIQ 617
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 325/556 (58%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ + ++ W A+I G+ +++ SL+ M EGIG TLS + K+ +
Sbjct: 267 RLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAAL 326
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +QIHA + L GF D YV N++I Y KCG +
Sbjct: 327 QANYMCRQIHALS-LKSGFEFDNYVVNSLIDTYGKCGHV--------------------- 364
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F E P+ D V +T++VT Y Q+ + EA+ + MQ G++ D
Sbjct: 365 ----------EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDS 414
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+++ACA L + V I + FG ++++ G++L++MY+KCGSI+DA
Sbjct: 415 FVCSSLLNACASLSAYEQGKQVHVHILK---FGFMSDIFAGNSLVNMYAKCGSIEDASCA 471
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + R + S+S+MI G A HG A+QLF M+K PN +T + VL AC+H GL
Sbjct: 472 FSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLV 531
Query: 305 C------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G+ P +HYACM+DLLGRAG LE A+++V KMP + N VWGALLG
Sbjct: 532 AEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLG 591
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
A +IH+N ++ + AA L LEP+K G +++L+NIYAS GMWD V+RVRRL+K +KK
Sbjct: 592 AARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKE 651
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SWLE + ++ F GD +H STEI L +L D L+ GY P + L+DV E
Sbjct: 652 PGMSWLEV-KDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSE 710
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+++L HSEKLA+AFGL+ T PGA +R+ KNLRIC DCH + S+++ REI+VRD
Sbjct: 711 KEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTN 770
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSCG YW
Sbjct: 771 RFHHFREGSCSCGEYW 786
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 45/346 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W AL Y+ +++SL+ M GI P F+LS++ CT +
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D G++IH I L G+ SD + N ++ MY K G L + VFDE+ + D+VS
Sbjct: 125 EDSVQGRKIHGYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS---- 179
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W A++ G V + A+E M +G+ +
Sbjct: 180 ---------------------------WNAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL + ACA + + + + G ++ +G LIDMYSKC S+DDA +F
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMG--SDSFLGVGLIDMYSKCNSMDDARLVF 270
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-------- 297
M +R++ +++++I G + + A LF M N T VL +
Sbjct: 271 KLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANY 330
Query: 298 -CSHVGLKCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPV 340
C + D+Y ++D G+ G +E+A ++ E+ P+
Sbjct: 331 MCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI 376
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 165/360 (45%), Gaps = 50/360 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M GI F ++ KACT D+ LG+Q+H +++ GF SD +V N+++ +Y KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHG-IVVVTGFDSDEFVANSLVILYAKCG 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
G +R +FD +P+R VVSW A+ + YV
Sbjct: 60 GFGDARSLFDAIPDRSVVSW-------------------------------NALFSCYVH 88
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
+ EA+ F M +G+ + +L +I+ C L + G+ ++
Sbjct: 89 SDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYD--SDA 146
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
+AL+DMY+K G ++DA +F + + ++ S++++I G +H H A++L +M K+
Sbjct: 147 FSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKS 206
Query: 283 ETKPNGVTFIGVLTACSHVGLKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEA 331
PN T L AC+ + L+ G + +D + ++D+ + +++A
Sbjct: 207 GMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDA 266
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG-NYIILSNIYAS 390
++V K+ E + W A++ H E + AA+ + + IG N LS + S
Sbjct: 267 -RLVFKLMPERDMIAWNAVISG---HSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 310/541 (57%), Gaps = 46/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WTALI Y+ GH ++I + G+ P SFT + AC V D+ G+ + A
Sbjct: 9 WTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAAR 68
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G ++V + +YVKCG + +R VFDEM RD V+W ++ YA+NG
Sbjct: 69 QEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNG------ 122
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
PREA++ F MQ G + D T+VG +SAC +LG
Sbjct: 123 -------------------------HPREALDLFFAMQMEGAKPDCYTVVGALSACTRLG 157
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ + + N V+G+ALIDMY+KCGS +A+ +F M +R++ +++M
Sbjct: 158 ALDLGRQAVGMVHWDEV--LGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAM 215
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
ILG M G A L G M K+ K N TFIG+L +C+H GL Y
Sbjct: 216 ILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYR 275
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+SP +HY CMVDL RAG LEEA +++ MP+ N VWGALLG C+IHRN ++A+ A
Sbjct: 276 ISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHAL 335
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L LEP GNY++LSNIY+++G W+D +++R +K G++K P SW+E D G +H+
Sbjct: 336 KQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELD-GKVHK 394
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD +HP S +I L +L ++A GY+P V++DV +EEK+ L+ HSEK+A+A
Sbjct: 395 FYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIA 454
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
F L+TT PG T+R+ KNLR+C DCH + S++ REIVVRDN RFH F+DG CSC +Y
Sbjct: 455 FSLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDY 514
Query: 548 W 548
W
Sbjct: 515 W 515
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
+P V+WTA++ Y+ EAI R +G+ D T V V++ACA++ ++
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
V A G +V V +A +D+Y KCG ++ A +F MK R+ ++ +M+ G+A
Sbjct: 61 EAVWAAARQEE-GVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYA 119
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP-STDHY-------- 315
+G A+ LF M KP+ T +G L+AC+ +G G H+
Sbjct: 120 SNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPV 179
Query: 316 --ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++D+ + G EA + ++M +E + VW A++
Sbjct: 180 LGTALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ W A++ GY GH ++++ L+ +M+ EG P +T+ ACT +
Sbjct: 97 RSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRL 156
Query: 66 LDVSLGQQ----IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ LG+Q +H +L + +G +I MY KCG + VF +M ERD++
Sbjct: 157 GALDLGRQAVGMVHWDEVL-----GNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDII- 210
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W AM+ G + A +M+ +GV
Sbjct: 211 ------------------------------VWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 182 ETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + T +G++ +C G++ + + P + ++D++S+ G +++
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISP--RIEHYGCMVDLFSRAGLLEE 298
Query: 241 AYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
A+++ M N + +++ G +H A A +++ E +G
Sbjct: 299 AHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSG 347
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 339/591 (57%), Gaps = 50/591 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKAC 62
+ R +F + F+ LIRG ++S+ + MRR P+ SF+ + L KA
Sbjct: 57 YARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAA 116
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-------- 114
+ G Q+H Q I+ G + L+VG T++ MY +CGF+ ++KVF+EM
Sbjct: 117 ASYRSLESGIQLHCQAIV-HGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAW 175
Query: 115 -----------------------PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
P R++ SW ++ Y G++E A LF E+P+KD V
Sbjct: 176 NAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDV 235
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W+ M+ G+ N EA +F +Q G+ + V+L G +SACA G I++ +
Sbjct: 236 SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFI 295
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAH 270
E SGF + V V +AL+D YSKCG++ A +F M ++R++ S++SMI G AMHG
Sbjct: 296 EKSGF--LWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGE 353
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACM 318
AIQLF +M ++ +P+G+ FI +L ACSH GL Y + P+ +HY CM
Sbjct: 354 EAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCM 413
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
VDL GRAG L++A + + MPV P +W LLGAC IH N ++A+ L EL+P+
Sbjct: 414 VDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNS 473
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
G++++LSNIYA AG W DV+ VRR + + K PG+S +E D+ +++ F AG++ + +
Sbjct: 474 GDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDK-IMYSFVAGEVQNSIT 532
Query: 439 TEIQQALGDLLDRLQADG-YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGA 497
E + L +++ +L+ +G Y P + SVL+D+ DEEK+ + HSEKLA+AFG+ G+
Sbjct: 533 EEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGS 592
Query: 498 TVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH M S+V G EIVVRD RFH F+ G CSC +YW
Sbjct: 593 IIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 115/310 (37%), Gaps = 98/310 (31%)
Query: 3 SFPRLVFEQ-------------------------------VKYKNPFLWTALIRGYILQG 31
+F + VFE+ + ++N W ++ GY G
Sbjct: 158 AFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAG 217
Query: 32 HL------------KDSIS-------------------LYCSMRREGIGPVSFTLSALFK 60
L KD +S + +++ G+ P +L+
Sbjct: 218 ELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALS 277
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDV 119
AC + + G+ +H I GF + V N ++ Y KCG +G +R VF+ MPE R +
Sbjct: 278 ACADAGAIEFGKILHG-FIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSI 336
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSWT +I A +G E EAI+ F M+ +
Sbjct: 337 VSWTSMIAGLAMHGYGE-------------------------------EAIQLFHEMEES 365
Query: 180 GVETDYVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+ D + + ++ AC+ G+I K + ++ + P + ++D+Y + G +
Sbjct: 366 GIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPA--IEHYGCMVDLYGRAGQL 423
Query: 239 DDAYRIFVGM 248
D AY + M
Sbjct: 424 DKAYEFIIHM 433
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-NGVTFIGVL 295
++D A R+F+ +VF ++++I G A ++ F +M + T P + +F +L
Sbjct: 54 ALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLL 113
Query: 296 TAC-------SHVGLKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A S + L C + D + +V + G + A K+ E+M EPN
Sbjct: 114 KAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNV 172
Query: 345 GVWGALLGAC 354
W A++ AC
Sbjct: 173 VAWNAVVTAC 182
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 327/564 (57%), Gaps = 56/564 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--------GIGPVSFTLSA 57
R +F+++ +N WT++I GY+ +++ L+ E + S + +
Sbjct: 2070 RALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVS 2129
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ AC+ V + + +H ++ GF + VGNT++ Y KCG S+KVFD M E
Sbjct: 2130 VLSACSRVSGKGITEGVHG-FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE- 2187
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM- 176
KD ++W +M+ Y Q+ EA+E F M
Sbjct: 2188 ------------------------------KDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
++ GV + VTL V+ ACA G ++ C + NV VG+++IDMY KCG
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGK--CIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A + F MK++NV S+++M+ G+ MHGRA A+ +F MV+ KPN +TF+ VL
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL Y + P +HY CMVDL GRAGCL EA ++++M ++P+
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 2395
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
VWG+LLGAC+IH+N ++ +IAA LFEL+PD G Y++LSN+YA AG W DV R+R L+
Sbjct: 2396 VVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLM 2455
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K L K PG+S +E +G +H F GD HP+ I + L L LQ GY PN+ SV
Sbjct: 2456 KNRQLVKPPGFSLVEL-KGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSV 2514
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+DV +EEK+ IL HSEKLA+AFG++ ++PG T+ I+KNLR+C DCH + S+++ R
Sbjct: 2515 LHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHR 2574
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
+ VVRD+ RFHHF+DG CSCG+YW
Sbjct: 2575 DFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 214/382 (56%), Gaps = 34/382 (8%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L+F Q++ F W +IR + G + ++ LY +M +GI FT + KACT L
Sbjct: 80 LLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFL 139
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+ +H +++ GF+ D++V N +I Y KCG + KVF++M R+VVSWT +I
Sbjct: 140 SIDLGKVVHG-SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVI 198
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ GD++ A +F+E+P K+ V+WTAM+ GY++N +P EA+E F+RMQ + +
Sbjct: 199 SGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEY 258
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN-----VVVGSALIDMYSKCGSIDDA 241
T+V +I AC ++G++ + + A I N V +G+ALIDMYSKCGSI DA
Sbjct: 259 TMVSLIKACTEMGILTLGRGIHDYA-------IKNCIEIGVYLGTALIDMYSKCGSIKDA 311
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M ++++ +++SMI +HG A+ LF +M + KP+ +TFIGVL AC H+
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Query: 302 G------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ YG++P +HY CM +L R+ L+EA K +++ G+
Sbjct: 372 KNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV---------GS 422
Query: 350 LLGACQIHRNPEIAQIAANHLF 371
L + I + Q+A L
Sbjct: 423 LANSPSICFDARAKQVAWTQLL 444
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 39/361 (10%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
++ V N W ++I G +++ + S+R+ G+ P + K+C+ + D+
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+ H Q + G F +DL+V + +I MY KCG L +R +FDE+P R+VVSWT +I
Sbjct: 2032 VSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y N ++A LF + ++ T + G V D V +
Sbjct: 2091 YVQNEQADNALLLFKDFLEEE----TEVEDG-------------------NNVPLDSVVM 2127
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V V+SAC+++ V GF ++ VG+ L+D Y+KCG + ++F M
Sbjct: 2128 VSVLSACSRVSGKGITEGVHGFVVKKGFD--GSIGVGNTLMDAYAKCGQPLVSKKVFDWM 2185
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL---- 303
++++ S++SMI +A G + A+++F MV+ + N VT VL AC+H G
Sbjct: 2186 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 2245
Query: 304 KCYG---VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
KC + ++ C ++D+ + G +E A K ++M E N W A++ +
Sbjct: 2246 KCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGM 2304
Query: 357 H 357
H
Sbjct: 2305 H 2305
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 35/239 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN WTA+I GYI ++++ L+ M+ E I P +T+ +L KACTE+
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++LG+ IH I +Y+G +I MY KCG + + +VF+ MP + + +W +
Sbjct: 271 GILTLGRGIHDYAI-KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I + +G + A LF+E M+ V+ D
Sbjct: 330 ITSLGVHGLGQEALNLFSE-------------------------------MERVNVKPDA 358
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T +GV+ AC + +K + + + G PI + ++Y++ ++D+A++
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHY--ECMTELYARSNNLDEAFK 415
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 61/306 (19%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+LI Y+ +G + A LF ++ W ++ N +A+ ++ M G+
Sbjct: 64 KLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA 123
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCG----- 236
D T VI AC I ++ GS +G +V V + LID Y KCG
Sbjct: 124 DKFTFPFVIKACTNFLSIDLG----KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 237 --------------------------SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ +A RIF + +NV S+++MI G+ + +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA-------------C 317
A++LF M PN T + ++ AC+ +G+ G YA
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG--RGIHDYAIKNCIEIGVYLGTA 297
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE--- 374
++D+ + G +++A+++ E MP + W +++ + +H + Q A N E+E
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH---GLGQEALNLFSEMERVN 353
Query: 375 --PDKI 378
PD I
Sbjct: 354 VKPDAI 359
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+ ++ LI +YS G I A +F ++ F+++ +I ++G + A+ L+
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLY 113
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRA 325
+MV + TF V+ AC+ H L YG S ++D +
Sbjct: 114 KNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC 173
Query: 326 GCLEEALKMVEKMPV 340
G ALK+ EKM V
Sbjct: 174 GHTRFALKVFEKMRV 188
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 325/558 (58%), Gaps = 47/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +F Q++ N F W +IRGY + ++ LY M I P + T L KA
Sbjct: 91 SYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAI 150
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++DV G+++H+ I GF S ++V NT++ MY CG
Sbjct: 151 AKLMDVREGEKVHSIAIR-NGFESLVFVQNTLVHMYAACG-------------------- 189
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
ESA LF + ++ V W +++ GY N +P EA+ F M GVE
Sbjct: 190 -----------HAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVE 238
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V ++SACA+LG + G N+ G+AL+D+Y+KCGSI A+
Sbjct: 239 PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD--GNLHAGNALLDLYAKCGSIRQAH 296
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M++++V S++S+I+G A++G A++LF ++ + P+ +TF+GVL ACSH G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ + YG+ P +HY CMVDLLGRAG +++A + ++ MP++PN VW L
Sbjct: 357 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC IH + + ++A L +LEP G+Y++LSN+YAS W DV +VRR + G+K
Sbjct: 417 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 476
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG+S +E R +HEF GD +HP + EI L ++ L+ +GY P++ +VL D+ +
Sbjct: 477 KTPGHSLVEL-RNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEE 535
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L HSEK+A+AF L+ T+ G +R++KNLR+C DCHL + S+V REIVVRD
Sbjct: 536 EEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRD 595
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 596 RSRFHHFKDGHCSCKDYW 613
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 14/228 (6%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
M A +F+++ + W M+ GY ++ P A+E + +M + +E D T ++ A
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A+L ++ V IA +GF + V V + L+ MY+ CG + A+++F M +RN+
Sbjct: 150 IAKLMDVREGEKVHSIAIRNGFESL--VFVQNTLVHMYAACGHAESAHKLFELMAERNLV 207
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----------SHVGL 303
+++S+I G+A++GR + A+ LF +M +P+G T + +L+AC +HV +
Sbjct: 208 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G+ + ++DL + G + +A K+ ++M E + W +L+
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSLI 314
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 218 PINNVVVGSALI-DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
P+ N +G LI + S C + A++IF ++ N+F++++MI G+A A++L+
Sbjct: 69 PLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELY 128
Query: 277 GDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA------CMVDLLGRA 325
M + +P+ T+ +L A + + G K + ++ + +V +
Sbjct: 129 RQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAAC 188
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
G E A K+ E M E N W +++ ++ P A
Sbjct: 189 GHAESAHKLFELM-AERNLVTWNSVINGYALNGRPNEA 225
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 327/564 (57%), Gaps = 56/564 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--------GIGPVSFTLSA 57
R +F+++ +N WT++I GY+ +++ L+ E + S + +
Sbjct: 1197 RALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVS 1256
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ AC+ V + + +H ++ GF + VGNT++ Y KCG S+KVFD M E
Sbjct: 1257 VLSACSRVSGKGITEGVHG-FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE- 1314
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM- 176
KD ++W +M+ Y Q+ EA+E F M
Sbjct: 1315 ------------------------------KDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
++ GV + VTL V+ ACA G ++ C + NV VG+++IDMY KCG
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGK--CIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A + F MK++NV S+++M+ G+ MHGRA A+ +F MV+ KPN +TF+ VL
Sbjct: 1403 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 1462
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL Y + P +HY CMVDL GRAGCL EA ++++M ++P+
Sbjct: 1463 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 1522
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
VWG+LLGAC+IH+N ++ +IAA LFEL+PD G Y++LSN+YA AG W DV R+R L+
Sbjct: 1523 VVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLM 1582
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K L K PG+S +E +G +H F GD HP+ I + L L LQ GY PN+ SV
Sbjct: 1583 KNRQLVKPPGFSLVEL-KGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSV 1641
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+DV +EEK+ IL HSEKLA+AFG++ ++PG T+ I+KNLR+C DCH + S+++ R
Sbjct: 1642 LHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHR 1701
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
+ VVRD+ RFHHF+DG CSCG+YW
Sbjct: 1702 DFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 202/349 (57%), Gaps = 25/349 (7%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L+F Q++ F W +IR + G + ++ LY +M +GI FT + KACT L
Sbjct: 80 LLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFL 139
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+ +H I G F+ D++V N +I Y KCG + KVF++M R+VVSWT +I
Sbjct: 140 SIDLGKVVHGSLIKYG-FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVI 198
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ GD++ A +F+E+P K+ V+WTAM+ GY++N +P EA+E F+RMQ + +
Sbjct: 199 SGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEY 258
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN-----VVVGSALIDMYSKCGSIDDA 241
T+V +I AC ++G++ + + A I N V +G+ALIDMYSKCGSI DA
Sbjct: 259 TMVSLIKACTEMGILTLGRGIHDYA-------IKNCIEIGVYLGTALIDMYSKCGSIKDA 311
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M ++++ +++SMI +HG A+ LF +M + KP+ +TFIGVL AC H+
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Query: 302 G------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+ YG++P +HY CM +L R+ L+EA K +++
Sbjct: 372 KNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 39/361 (10%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
++ V N W ++I G +++ + S+R+ G+ P + K+C+ + D+
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+ H Q + G F +DL+V + +I MY KCG L +R +FDE+P R+VVSWT +I
Sbjct: 1159 VSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y N ++A LF + L+++ E V D V +
Sbjct: 1218 YVQNEQADNALLLFKDF-LEEET----------------------EVEDGNNVPLDSVVM 1254
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V V+SAC+++ V GF ++ VG+ L+D Y+KCG + ++F M
Sbjct: 1255 VSVLSACSRVSGKGITEGVHGFVVKKGFD--GSIGVGNTLMDAYAKCGQPLVSKKVFDWM 1312
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL---- 303
++++ S++SMI +A G + A+++F MV+ + N VT VL AC+H G
Sbjct: 1313 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372
Query: 304 KCYG---VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
KC + ++ C ++D+ + G +E A K ++M E N W A++ +
Sbjct: 1373 KCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGM 1431
Query: 357 H 357
H
Sbjct: 1432 H 1432
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 35/239 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN WTA+I GYI ++++ L+ M+ E I P +T+ +L KACTE+
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++LG+ IH I +Y+G +I MY KCG + + +VF+ MP + + +W +
Sbjct: 271 GILTLGRGIHDYAI-KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I + +G + A LF+E M+ V+ D
Sbjct: 330 ITSLGVHGLGQEALNLFSE-------------------------------MERVNVKPDA 358
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T +GV+ AC + +K + + + G PI + ++Y++ ++D+A++
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHY--ECMTELYARSNNLDEAFK 415
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 61/306 (19%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+LI Y+ +G + A LF ++ W ++ N +A+ ++ M G+
Sbjct: 64 KLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA 123
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCG----- 236
D T VI AC I ++ GS +G +V V + LID Y KCG
Sbjct: 124 DKFTFPFVIKACTNFLSIDLG----KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 237 --------------------------SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+ +A RIF + +NV S+++MI G+ + +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA-------------C 317
A++LF M PN T + ++ AC+ +G+ G YA
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG--RGIHDYAIKNCIEIGVYLGTA 297
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE--- 374
++D+ + G +++A+++ E MP + W +++ + +H + Q A N E+E
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH---GLGQEALNLFSEMERVN 353
Query: 375 --PDKI 378
PD I
Sbjct: 354 VKPDAI 359
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+ ++ LI +YS G I A +F ++ F+++ +I ++G + A+ L+
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLY 113
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRA 325
+MV + TF V+ AC+ H L YG S ++D +
Sbjct: 114 KNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC 173
Query: 326 GCLEEALKMVEKMPVE 341
G ALK+ EKM V
Sbjct: 174 GHTRFALKVFEKMRVR 189
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/542 (39%), Positives = 327/542 (60%), Gaps = 18/542 (3%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+T+ I + +G +++L M G+ P S TLS+ AC ++LG+ +HA
Sbjct: 100 FYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHAYA 156
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
L D YV ++GMY + G +R +FDEMP+ VV T ++ YA G ++ A
Sbjct: 157 FKLA-LAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDA 215
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ +P KD + W AM+ GY Q+ +P EA+ F M +GV+ D V ++ +SA AQL
Sbjct: 216 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 275
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G + W+ + S +N VG+ALIDMY KCGS++DA +F + +++ +++
Sbjct: 276 GTAESGRWLHSYVKNSRRVQLN-ARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 334
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCY 306
MI G+AMHG + A+++F + P +TFIG+L ACSH GL + Y
Sbjct: 335 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEY 394
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
+ P +HY CMVDLLGRAG +EEA +V+ M + P+ +W +LL AC++H+N + Q
Sbjct: 395 AIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQI 454
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A++L G YI+LSNIYA+ G W++V+RVR ++K +G++K PG S +E R V +
Sbjct: 455 ADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKV-Y 513
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
EF AGD++HP + EI L + ++ G+ P VL+D+ + K++ L HSEKLA+
Sbjct: 514 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAV 573
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL++T+PG T++I+KNLR C DCH + S++ GR+IV RD RFHHF DG C+CG+
Sbjct: 574 AFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGD 633
Query: 547 YW 548
YW
Sbjct: 634 YW 635
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 32/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A+I GY G +++ L+ M R G+ P + A ++
Sbjct: 216 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 275
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+ +H+ + VG +I MY KCG L + VF+ + ++D+V W +
Sbjct: 276 GTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAM 335
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +GD R+A+E F +++ G+
Sbjct: 336 INGYAMHGD-------------------------------SRKALEMFSQLRSQGLWPTD 364
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G+++AC+ G++ + + E + + + ++D+ + G I++A+ +
Sbjct: 365 ITFIGLLNACSHSGLVDEGHQFFQSME-EEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 423
Query: 246 VGM 248
M
Sbjct: 424 QSM 426
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/542 (39%), Positives = 327/542 (60%), Gaps = 18/542 (3%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+T+ I + +G +++L M G+ P S TLS+ AC ++LG+ +HA
Sbjct: 99 FYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHAYA 155
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
L D YV ++GMY + G +R +FDEMP+ VV T ++ YA G ++ A
Sbjct: 156 FKLA-LAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDA 214
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ +P KD + W AM+ GY Q+ +P EA+ F M +GV+ D V ++ +SA AQL
Sbjct: 215 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 274
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G + W+ + S +N VG+ALIDMY KCGS++DA +F + +++ +++
Sbjct: 275 GTAESGRWLHSYVKNSRRVQLN-ARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 333
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCY 306
MI G+AMHG + A+++F + P +TFIG+L ACSH GL + Y
Sbjct: 334 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEY 393
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
+ P +HY CMVDLLGRAG +EEA +V+ M + P+ +W +LL AC++H+N + Q
Sbjct: 394 AIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQI 453
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A++L G YI+LSNIYA+ G W++V+RVR ++K +G++K PG S +E R V +
Sbjct: 454 ADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKV-Y 512
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
EF AGD++HP + EI L + ++ G+ P VL+D+ + K++ L HSEKLA+
Sbjct: 513 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAV 572
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL++T+PG T++I+KNLR C DCH + S++ GR+IV RD RFHHF DG C+CG+
Sbjct: 573 AFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGD 632
Query: 547 YW 548
YW
Sbjct: 633 YW 634
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 32/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A+I GY G +++ L+ M R G+ P + A ++
Sbjct: 215 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 274
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+ +H+ + VG +I MY KCG L + VF+ + ++D+V W +
Sbjct: 275 GTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAM 334
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +GD R+A+E F +++ G+
Sbjct: 335 INGYAMHGD-------------------------------SRKALEMFSQLRSQGLWPTD 363
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G+++AC+ G++ + + E + + + ++D+ + G I++A+ +
Sbjct: 364 ITFIGLLNACSHSGLVDEGHQFFQSME-EEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 422
Query: 246 VGM 248
M
Sbjct: 423 QSM 425
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 332/558 (59%), Gaps = 48/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S RL+F+++ N FLW LIRGY G + ++ LY M G+ P +FT + KAC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + G++IH + ++ G+ D++VG +I MY KCG +G +R+VFD++ RD V W
Sbjct: 187 AALSAIEHGREIH-EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ AY+ NG ++ L +E+ ++TG +P EA
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEM----------VLTGL----RPTEA------------- 278
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
TLV ISA A + + ++ F + V +AL+DMY+KCGS+ A
Sbjct: 279 ----TLVTAISASADNAALPQGRELHGLSWRQEFESHDK--VKTALVDMYAKCGSVRVAR 332
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + + V S+++MI G+AMHG A A+ LF +M + KP+ +TF+GVL+ACSH G
Sbjct: 333 NLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGG 391
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + Y + P+ HY CMVDLLG +G L+EA ++ +M V P+ GVWGAL
Sbjct: 392 LLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGAL 451
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L +C+IH N E+ +IA L ELEPD GNY+ILSNIYA AG W+ V+++R+L+ LK
Sbjct: 452 LNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLK 511
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+ SW+E + +H F +GD +HP S EI L + ++ GY P+ SV +DV D
Sbjct: 512 KSIACSWIEV-KNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVED 570
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK ++ +HSE+LA+AFGL++T PG + I KNLRICEDCH+ + S++ REI VRD
Sbjct: 571 DEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRD 630
Query: 531 NMRFHHFQDGKCSCGNYW 548
R+HHF+DG CSCG+YW
Sbjct: 631 VNRYHHFKDGVCSCGDYW 648
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 159/361 (44%), Gaps = 51/361 (14%)
Query: 11 QVKYKNPFLWTALIRGYILQGHLKDSISLYCS---MRREGIGPVSFTLSALFKACTEVLD 67
Q + NP ++ + Q HLK S CS + P ++L ++C
Sbjct: 33 QYQSPNPSFTSSAPQFDNNQTHLKAIPS--CSNPHAESTCLTPTYSNYASLLQSCIARKA 90
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HAQ + L GF D + ++ +Y C L +R +FD +P+ ++ W LI
Sbjct: 91 IKPGKQLHAQ-VCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIR 149
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA NG E+A L Y++ Y G+ D T
Sbjct: 150 GYAWNGPYEAAVQL------------------------------YYQMFDY-GLVPDNFT 178
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA L I++ + E +G+ +V VG+ALIDMY+KCG + A +F
Sbjct: 179 FPFVLKACAALSAIEHGREIHEHVVQTGWE--KDVFVGAALIDMYAKCGCVGSAREVFDK 236
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VG 302
+ R+ ++SM+ ++ +G A + L +MV T +P T + ++A + G
Sbjct: 237 ILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQG 296
Query: 303 LKCYGVS-----PSTDHY-ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ +G+S S D +VD+ + G + A + E++ V+ W A++ +
Sbjct: 297 RELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAM 355
Query: 357 H 357
H
Sbjct: 356 H 356
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
Y ++ +C IK + +GFG + V+ + L+++Y C S+ A +
Sbjct: 75 YSNYASLLQSCIARKAIKPGKQLHAQVCLAGFG--FDTVIATKLVNLYCVCDSLSSARLL 132
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F + + N+F ++ +I G+A +G AA+QL+ M P+ TF VL AC+
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 300 ------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H + G A ++D+ + GC+ A ++ +K+ V + +W ++L A
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSMLAA 251
Query: 354 CQIHRNPE 361
+ +P+
Sbjct: 252 YSQNGHPD 259
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 328/558 (58%), Gaps = 19/558 (3%)
Query: 6 RLVFEQVK--YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F V+ ++ W+A++ Y ++++ L+ M+ G+ + + AC+
Sbjct: 222 RRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACS 281
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
VL+V +G+ +H + +G + + N +I +Y CG + +R++FD+ E D++SW
Sbjct: 282 RVLNVEMGRWVHGLAVKVG-VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISW 340
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I Y G ++ A LF +P KD V+W+AM++GY Q+ EA+ F+ MQ GV
Sbjct: 341 NSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVR 400
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D LV ISAC L + W+ + NV++ + LIDMY KCG +++A
Sbjct: 401 PDETALVSAISACTHLATLDLGKWIHAYISRNKLQV--NVILSTTLIDMYMKCGCVENAL 458
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+++ V +++++ILG AM+G ++ +F DM KT T PN +TF+GVL AC H+G
Sbjct: 459 EVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG 518
Query: 303 LKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G + + HY CMVDLLGRAG L+EA ++++ MP+ P+ WGAL
Sbjct: 519 LVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGAL 578
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+ HR+ E+ + L +L+PD G +++LSNIYAS G W +V +R ++ G+
Sbjct: 579 LGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVV 638
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S +E + G +HEF AGD THP +I+ L + +L+ +GY P V D+ +
Sbjct: 639 KTPGCSMIEAN-GTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDE 697
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L HSEKLA+AFGL+T SP +R+ KNLRIC DCH + S+ R+IVVRD
Sbjct: 698 EEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRD 757
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+ G CSC ++W
Sbjct: 758 RHRFHHFKHGACSCMDFW 775
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 186/419 (44%), Gaps = 77/419 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F ++ N F W ++R ++ LQ ++ Y P S+T L + C +
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
G+Q+HA + GF D+YV NT++ +Y CG +G +R+VF+E P D+VSW L+
Sbjct: 120 SEFEGRQLHAHAVS-SGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 127 VAYANNGDMESAGGLFNELPLK---------------------------------DKVAW 153
Y G++E A +F +P + D V+W
Sbjct: 179 AGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSW 238
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+AMV+ Y QN EA+ F M+ +GV D V +V +SAC+++ ++ WV +A
Sbjct: 239 SAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVK 298
Query: 214 SGF------------------------------GPINNVVVGSALIDMYSKCGSIDDAYR 243
G G + +++ +++I Y +CGSI DA
Sbjct: 299 VGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEM 358
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +++V S+S+MI G+A H A+ LF +M +P+ + ++AC+H+
Sbjct: 359 LFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLAT 418
Query: 304 KCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + + ++D+ + GC+E AL++ M E W A++
Sbjct: 419 LDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVI 476
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL---GCSRKV 110
TL +L ++C +Q+ +QTIL G T D Y + +I L S ++
Sbjct: 5 TLDSLLQSCKCPRHF---KQLLSQTILTGLIT-DPYAASRLINFSSHSTTLVPFHYSLRI 60
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK-----DKVAWTAMVTGYVQNAK 165
F+ + + +W ++ A+ + L +L L D + ++
Sbjct: 61 FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120
Query: 166 PREAIEYFERMQYAGVETD-YV--TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
E + +G + D YV TL+ + + C +G + + E S P+ ++
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSAR------RVFEES---PVLDL 171
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
V + L+ Y + G +++A R+F GM +RN + +SMI F G A ++F
Sbjct: 172 VSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIF 225
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 328/561 (58%), Gaps = 60/561 (10%)
Query: 6 RLVFEQVKYKNPF--LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF++ + + ALI GY L D++ L+ MR+EG+ + T+ L C
Sbjct: 111 RKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCA 170
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G +HA ++ G DL VGN ++ MYV+CG + +RK
Sbjct: 171 GPIHLGFGTSLHACSVRFG-LDGDLSVGNCLLTMYVRCGSVDFARK-------------- 215
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF+ +P K + W AM++GY QN ++ + +M++ G+
Sbjct: 216 -----------------LFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVP 258
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VTLVGV+S+CA LG V + E SGFG N + +ALI+MY++CG++ A
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFG--FNPFLKNALINMYARCGNLVKARA 316
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
IF GM ++NV S++++I G+ MHG+ A+QLF +M+ ++ P+G F+ VL+ACSH GL
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG+ P +HY+C+VDLLGRAG LEEA K++ M VEP+G VWGALL
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALL 436
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IHRN E+A++A + E EP IG Y++LSNI++ AG + + RVR +++ LKK
Sbjct: 437 GACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKK 496
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG S++E +G IH F AGD THP + EI L L D ++ G D E
Sbjct: 497 EPGCSYVE-YQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSN-------DNDQE 548
Query: 472 EKKRILMT----HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ L+T HSEKLA+AFGL+ T PG + ++KNLR+C DCHLF+ S+++ R++V
Sbjct: 549 SRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLV 608
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF++G CSC +YW
Sbjct: 609 VRDATRFHHFKNGVCSCKDYW 629
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 48/357 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A +R Q H +++++LYC M G P +FT FK+C + G Q+H I
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G + +V ++I MY KC + +RKVFDE
Sbjct: 84 KTG-CEPEPFVQTSLISMYCKCSTIASARKVFDE-------------------------- 116
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
N V + A++ GY N++ +A+ F +M+ GV + VT++G+I CA G
Sbjct: 117 ---NHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCA--G 171
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I A FG ++ VG+ L+ MY +CGS+D A ++F GM ++ + ++++M
Sbjct: 172 PIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAM 231
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------------LKCY 306
I G+A +G A + L+ M T P+ VT +GVL++C+H+G L +
Sbjct: 232 ISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF 291
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
G +P + ++++ R G L +A + + M E N W A++ +H E+A
Sbjct: 292 GFNPFLKN--ALINMYARCGNLVKARAIFDGM-TEKNVISWTAIIAGYGMHGQGELA 345
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F+ + K W A+I GY G + LY M GI P TL + +C
Sbjct: 212 FARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCA 271
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+++ Q I L GF + ++ N +I MY +CG L +R +FD M E++V+SWT
Sbjct: 272 HLGAHAAGREVE-QRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWT 330
Query: 124 ELIVAYANNGDMESAGGLFNEL----PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+I Y +G E A LF+E+ L D A+ ++++ + + YF M+
Sbjct: 331 AIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAME 388
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/627 (36%), Positives = 345/627 (55%), Gaps = 89/627 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ RLVF Q+ F ++IRGY + + +I Y M +G+ P FT +LFK+C
Sbjct: 92 YARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG 151
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNT------------------------------ 93
+ + G+Q+H + LG F SD Y+ NT
Sbjct: 152 VLCE---GKQLHCHSTKLG-FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWA 207
Query: 94 -MIGMYVKCGFLGCSRKVFDEMPERDV----VSWTELIVAYANNGDMESAG--------- 139
MIG Y + + K+F M V ++ ++ A A + D+E+A
Sbjct: 208 TMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDET 267
Query: 140 --------------------------GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
LFN++P K+ W M+ G+V+++ EA+ F
Sbjct: 268 GIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLF 327
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
MQ +GV+ D VT+ ++ AC LG ++ W+ E +V +G+AL+DMY+
Sbjct: 328 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEV--DVALGTALVDMYA 385
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCGSI+ A R+F M +++V +++++I+G AM G+ A++LF +M +E KP+ +TF+G
Sbjct: 386 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 445
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL ACSH GL YG+ PS +HY CMVD+LGRAG + EA +++ MP+
Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA 505
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P+ V LL AC+IH N +A+ AA L EL+P G Y++LSNIY+S W+ ++R
Sbjct: 506 PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMR 565
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+ +KK PG S +E GV+HEF GD++HP S+EI + L D++ RL++ GY P+
Sbjct: 566 ELMVERNIKKPPGCSAIEVG-GVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDK 624
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
VL+D+ ++EK+ L HSEKLA+AFGLL+T+PG +R++KNLR+C DCH M S+V
Sbjct: 625 SEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEV 684
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
REI+VRD RFHHF G CSC ++W
Sbjct: 685 YNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A ++G + A +FN++P +++ GY PR+AI +++ M G++ D T
Sbjct: 83 ALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFT 142
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ +C L K + + G ++ + + L++MYS CG + A ++F
Sbjct: 143 FPSLFKSCGVLCEGKQLH-----CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDK 197
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
M ++V S+++MI +A H AI+LF M KPN +T + VLTAC+
Sbjct: 198 MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETA 257
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H + G+ T + ++D+ + GC A + KMP E N W ++
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMIN 312
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 328/557 (58%), Gaps = 52/557 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+++ K W ++I GY+ G ++ ++ M E + + T+ AC ++
Sbjct: 331 RLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADL 390
Query: 66 LDVSLGQQIHA--QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
DV G+ +H + LG SD+ V N++I MY KC
Sbjct: 391 GDVEQGRFVHKLLDQLELG---SDVSVMNSLISMYSKCK--------------------- 426
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ A +F L K V+W AM+ GY QN + EAI+YF +MQ ++
Sbjct: 427 ----------RVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKP 476
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D T+V VI A A+L V+ A W+ + + NV V +AL+DMY+KCG++ A +
Sbjct: 477 DSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLD--KNVFVATALVDMYAKCGAVHTARK 534
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +R+V ++++MI G+ HG AA++LF M K KPN VTF+ VL+ACSH GL
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGL 594
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K YG+ P+ DHY MVDLLGRA L EA ++KMP+EP V+GA+L
Sbjct: 595 VEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAML 654
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N E+ + AAN +F+L+PD G +++L+NIYA+A MWD V+RVR ++ G++K
Sbjct: 655 GACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQK 714
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG+S +E V H F +G +HP + +I L L +R++A GY P+ SV +DV D
Sbjct: 715 TPGWSVVELQNEV-HTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDV 772
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+++L +HSEKLA+AF LL TSPG T+ + KNLR+C DCH S V REI+VRD
Sbjct: 773 VKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDM 832
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 833 RRFHHFKDGTCSCGDYW 849
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ K L+ +++GY L D++S +C MR +G+ PV + + L K C + D
Sbjct: 131 VFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNAD 190
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH Q +++ GF S+++ ++ MY KC +
Sbjct: 191 LRKGKEIHCQ-LIVNGFASNVFAMTGVVNMYAKCRLV----------------------- 226
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A +F+ +P +D V W +++GY QN + A+E RMQ G D +T
Sbjct: 227 --------EEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V ++ A A +G ++ + + +GF NV +AL+DMYSKCGS+ A IF
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNV--STALVDMYSKCGSVGTARLIFDR 336
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M + V S++SMI G+ +G AA+++F M+ + + VT +G L AC+ +G
Sbjct: 337 MTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLG 391
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 175/361 (48%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ W +I GY G K ++ L M+ EG P S T+ ++ A +V
Sbjct: 232 MFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGS 291
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH + + GF S + V ++ MY KCG +G +R +FD M + V
Sbjct: 292 LRIGRSIHGYS-MRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTV-------- 342
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
V+W +M+ GYVQN P A+E F++M VE VT
Sbjct: 343 -----------------------VSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++G + ACA LG ++ +V ++ + G ++V V ++LI MYSKC +D A IF
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELG--SDVSVMNSLISMYSKCKRVDIAAEIFEN 437
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
++ + + S+++MILG+A +GR + AI F M KP+ T + V+ A + + +
Sbjct: 438 LQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497
Query: 305 --CYGVSPST--DH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+G+ T D +VD+ + G + A K+ + M E + W A++
Sbjct: 498 KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGT 556
Query: 357 H 357
H
Sbjct: 557 H 557
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKV--AWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T+L+ + G + A +F P++DK+ + M+ GY +N+ +A+ +F RM+Y G
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQ--PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG 170
Query: 181 VETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V ++ C ++ + C++ +GF +NV + +++MY+KC ++
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIV-NGFA--SNVFAMTGVVNMYAKCRLVE 227
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+AY++F M +R++ ++++I G+A +G A++L M + +P+ +T + +L A +
Sbjct: 228 EAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVA 287
Query: 300 HVG 302
VG
Sbjct: 288 DVG 290
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 328/555 (59%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ KN W+A+I Y G + ++ L+ M G+ P TL++L AC+++
Sbjct: 186 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDL 245
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +G+ IH + G D +V ++ MY KC
Sbjct: 246 KNLQMGRLIH-HIVYKFGLDLDHFVCAALVDMYGKCR----------------------- 281
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E A LF+++P +D V WT M+ GY + E++ F++M+ GV D
Sbjct: 282 --------EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK 333
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V +V V+ ACA+LG + A + + + F +V++G+A+IDM++KCG ++ A IF
Sbjct: 334 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL--DVILGTAMIDMHAKCGCVESAREIF 391
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+++NV S+S+MI + HG+ A+ LF M+++ PN +T + +L ACSH GL
Sbjct: 392 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 451
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y V HY C+VDLLGRAG L+EALK++E M VE + G+WGA LGA
Sbjct: 452 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H++ +A+ AA L EL+P G+YI+LSNIYA+AG W+DV++ R L+ LKK P
Sbjct: 512 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 571
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G++W+E D H+F GD THP S EI + L L ++L+ GY P+ VL+DV +E K
Sbjct: 572 GWTWIEVDNKS-HQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 630
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
IL +HSEKLA+AFGL+ T +RI+KNLR+C DCH F S + GR I+VRD R
Sbjct: 631 IGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 690
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 691 FHHFKEGACSCGDYW 705
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 51/384 (13%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
++ G+ G + + + R G P ++TL + +AC ++ ++ +G+ IH +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH-HIVYKF 59
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G D +V ++ MYVKC ++E A LF
Sbjct: 60 GLDLDHFVCAALVDMYVKCR-------------------------------EIEDARFLF 88
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+++ +D V WT M+ GY + K E++ FE+M+ GV D V +V V+ ACA+LG +
Sbjct: 89 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 148
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
A + + + F +V++G+A+IDMY+KCG ++ A IF M+++NV S+S+MI
Sbjct: 149 KARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH---------VGLKCYGVSPSTD 313
+ HG+ A+ LF M+ + P+ +T +L ACS + Y D
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLD 266
Query: 314 HYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
H+ C +VD+ G+ +E+A + +KMP E + W ++G N + + + +
Sbjct: 267 HFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGNANESLVLFDKMR 325
Query: 372 E--LEPDKIGNYIILSNIYASAGM 393
E + PDK+ +++ ++A A +
Sbjct: 326 EEGVVPDKVA---MVTVVFACAKL 346
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 50/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ ++ WT +I GY G +S+ L+ MR EG+ P + + AC +
Sbjct: 85 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK- 143
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +I I F D+ +G MI MY KC GC
Sbjct: 144 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC---GC------------------- 181
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ESA +F+ + K+ ++W+AM+ Y + + R+A++ F M +G+ D
Sbjct: 182 ---------VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 232
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+TL ++ AC+ L ++ + I FG + V +AL+DMY KC I+DA +F
Sbjct: 233 ITLASLLYACSDLKNLQMGRLIHHIV--YKFGLDLDHFVCAALVDMYGKCREIEDARFLF 290
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +R++ +++ MI G+A G A+ ++ LF M + P+ V + V+ AC+ +G
Sbjct: 291 DKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG--A 348
Query: 306 YGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + D Y M+D+ + GC+E A ++ ++M E N W A++
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIA 407
Query: 353 ACQIH 357
A H
Sbjct: 408 AYGYH 412
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/556 (40%), Positives = 318/556 (57%), Gaps = 50/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F+++ +N W A+I G Q ++++SL+ MRREG P + T + A
Sbjct: 390 QLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGE 449
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +++H+ I G DL VGN ++ MY KCG +++VFD+M E
Sbjct: 450 EALEWVKEVHSYAIDAG--LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVE--------- 498
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ WT M++G Q+ EA F +M G+ D
Sbjct: 499 ----------------------RNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDA 536
Query: 186 VTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V ++SACA G ++ WV E+ + G ++++ VG+AL+ MY+KCGS+DDA R+
Sbjct: 537 TTYVSILSACASTGALE---WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRV 593
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +R+V+S++ MI G A HGR A+ LF M KPNG +F+ VL+ACSH GL
Sbjct: 594 FDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLV 653
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ YG+ P+ +HY CMVDLLGRAG LEEA + MP+EP WGALLG
Sbjct: 654 DEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLG 713
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC + N E+A+ AA +L+P Y++LSNIYA+ G W+ VR +++ G++K
Sbjct: 714 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKE 773
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E D IH F GD +HP S EI L DL+ RL+A+GY P+ R VL + E
Sbjct: 774 PGRSWIEVDNQ-IHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEY 832
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L +HSEKLA+ +GL+ T +R+ KNLR+C DCH S+V GREIV RD
Sbjct: 833 KEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAK 892
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 893 RFHHFKDGVCSCGDYW 908
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 187/410 (45%), Gaps = 67/410 (16%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
+I GY G+ +D++ +Y MRREG P T ++ KAC + + G++IHA I+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAH-IIQS 59
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF SD+ V ++ MYVKCG + ++ +FD+M ER+V+SW
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISW-------------------- 99
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
T M+ G + +EA F +MQ G + T V +++A A G ++
Sbjct: 100 -----------TVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ V A +G ++ VG+AL+ MY+K GSIDDA +F GM +R++FS++ MI G
Sbjct: 149 WVKEVHSHAVNAGLAL--DLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGG 206
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA------ 316
A HGR A LF M + PN T++ +L A + +A
Sbjct: 207 LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFI 266
Query: 317 -------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANH 369
++ + + G +++A + + M + + W A++G +AQ H
Sbjct: 267 SDLRVGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMIGG--------LAQNGCGH 317
Query: 370 -----LFELE-----PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+++ PD Y+ L N + S G W+ V V + GL
Sbjct: 318 EAFTIFLKMQQEGFVPDST-TYLSLLNTHVSTGAWEWVKEVHKHAVEVGL 366
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 50/361 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F+++ +N WT +I G G +++ + M+REG P S+T ++ A
Sbjct: 85 QLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASA 144
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +++H+ + G DL VGN ++ MY K G + +R VFD M ERD+ SWT
Sbjct: 145 GALEWVKEVHSHAV-NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWT-- 201
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ G Q+ + +EA F +M+ G +
Sbjct: 202 -----------------------------VMIGGLAQHGRGQEAFSLFLQMERGGCLPNL 232
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSG-FGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T + +++A A + WV E+ + +G G I+++ VG+ALI MY+KCGSIDDA +
Sbjct: 233 TTYLSILNASA-ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLV 291
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F GM R+V S+++MI G A +G H A +F M + P+ T++ +L +HV
Sbjct: 292 FDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLN--THVSTG 349
Query: 305 CYGVSPSTDHYACMVDLLG-------------RAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +A V L+ R G +++A + +K+ V N W A++
Sbjct: 350 AWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408
Query: 352 G 352
G
Sbjct: 409 G 409
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 208/505 (41%), Gaps = 104/505 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC--T 63
R+VF+ + ++ F WT +I G G +++ SL+ M R G P T ++ A T
Sbjct: 186 RVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAIT 245
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +++H GF SDL VGN +I MY KCG + +R VFD M +RDV+SW
Sbjct: 246 STGALEWVKEVHKHA-GKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW- 303
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
AM+ G QN EA F +MQ G
Sbjct: 304 ------------------------------NAMIGGLAQNGCGHEAFTIFLKMQQEGFVP 333
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T + +++ G + WV E+ + + G ++++ VGSA + MY +CGSIDDA
Sbjct: 334 DSTTYLSLLNTHVSTGAWE---WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ 390
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT------ 296
IF + RNV ++++MI G A A+ LF M + P+ TF+ +L+
Sbjct: 391 LIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEE 450
Query: 297 ------------------------ACSHVGLKCYG-----------VSPSTDHYACMVDL 321
A H+ KC V + + M+
Sbjct: 451 ALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG 510
Query: 322 LGRAGCLEEALKMVEKMPVE---PNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPD 376
L + GC EA + +M E P+ + ++L AC E + +H L D
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570
Query: 377 -KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTH 435
++GN ++ ++YA G DD RV + + YSW G+ R D
Sbjct: 571 LRVGNALV--HMYAKCGSVDDARRV-----FDDMLERDVYSWTVMIGGLAQHGRGLDAL- 622
Query: 436 PNSTEIQQALGDLLDRLQADGYQPN 460
DL +++ +G++PN
Sbjct: 623 -----------DLFVKMKLEGFKPN 636
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + VF+ + +N WT +I G G ++ SL+ M REGI P + T ++ AC
Sbjct: 488 YAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA 547
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +++H+ + G SDL VGN ++ MY KCG + +R+VFD+M ERDV SW
Sbjct: 548 STGALEWVKEVHSHAVN-AGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSW- 605
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
T M+ G Q+ + +A++ F +M+ G +
Sbjct: 606 ------------------------------TVMIGGLAQHGRGLDALDLFVKMKLEGFKP 635
Query: 184 DYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ + V V+SAC+ G++ + + G P + ++D+ + G +++A
Sbjct: 636 NGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHY--TCMVDLLGRAGQLEEAK 693
Query: 243 RIFVGM 248
+ M
Sbjct: 694 HFILNM 699
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 325/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+ + K W +++ GY+ G + +I+++ M EGI P T+ AC ++
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ +H L SD+ V N++I MY KC ++V
Sbjct: 363 GDLERGKFVHKFVDQLN-LGSDISVMNSLISMYSKC------KRV--------------- 400
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A +FN L + V+W AM+ GY QN + EA+ F M+ G++ D
Sbjct: 401 ----------DIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V VI A A+L V ++A W+ + S N+ V +AL+DMYSKCG+I A ++F
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLD--KNIFVTTALVDMYSKCGAIHMARKLF 508
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ R+V ++++MI G+ HG AA+ LF M K +PN +T++ V++ACSH GL
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ PS DHY MVDLLGRAG ++EA +E MP+ P V+GA+LGA
Sbjct: 569 EGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGA 628
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH+N E+ + AA LFEL PD+ G +++L+NIYAS W V+ VR+ ++ GLKK P
Sbjct: 629 CKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTP 688
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E R +H F +G THP S I L +L+ ++A GY P+ +L DV D+ +
Sbjct: 689 GCSVVEL-RNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQ 746
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L +HSEKLA+AFGLL TSPG T+ + KNLR+C DCH S V GREI+VRD R
Sbjct: 747 EQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQR 806
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 807 FHHFKNGICSCGDYW 821
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K L+ +++GY L+ +++ C MR + + PV + + L K C + D
Sbjct: 103 VFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD 162
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH Q ++ F ++++ ++ MY KC R++ D
Sbjct: 163 LKRGKEIHGQ-LITNSFAANVFAMTGVVNMYAKC------RQIDD--------------- 200
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +F+ +P +D V+W ++ G+ QN ++A+E RMQ G D +T
Sbjct: 201 ----------AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV V+ A A +G++ + A +GF + N+ +AL DMYSKCGS++ A IF G
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI--STALADMYSKCGSVETARLIFDG 308
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M Q+ V S++SM+ G+ +G AI +F M++ P GVT + L AC+ +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ W +I G+ G K ++ L M+ EG P S TL + A +V
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH I GF + + + MY KCG
Sbjct: 264 LMVGKSIHGYAIR-AGFAKLVNISTALADMYSKCG------------------------- 297
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E+A +F+ + K V+W +M+ GYVQN +P +AI FE+M G++ VT
Sbjct: 298 ------SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ + ACA LG ++ +V + + G +++ V ++LI MYSKC +D A IF
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLG--SDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ R S+++MILG+A +GR A+ F +M KP+ T + V+ A + + + +
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 308 -------VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ D +VD+ + G + A K+ + M + + W A++
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGT 528
Query: 357 H 357
H
Sbjct: 529 H 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 19/286 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ ++ G + A +F + K + M+ GY +N+ A+ + RM+Y V+
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ C +K + + F NV + +++MY+KC IDDAY
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA--NVFAMTGVVNMYAKCRQIDDAY 202
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +R++ S++++I GF+ +G A A++L M +P+ +T + VL A + VG
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 303 LKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L G S YA + D+ + G +E A + + M + W +
Sbjct: 263 LLMVG--KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD-QKTVVSWNS 319
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
++ + PE A + E D G I+ ++A A + D
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTG-VTIMEALHACADLGD 364
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N + + L+ ++SK GSI++A R+F + + Y +M+ G+A + A+
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRA 325
M + KP F +L C H L + + +V++ +
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKC 195
Query: 326 GCLEEALKMVEKMP 339
+++A KM ++MP
Sbjct: 196 RQIDDAYKMFDRMP 209
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 330/556 (59%), Gaps = 19/556 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE--V 65
+F+ + ++P W +L+ L ++S+ S+ G P F ++L KAC V
Sbjct: 60 LFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGV 119
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L V G+Q+HA+ L F+ D V +++I MY K G R VFD + + +SWT +
Sbjct: 120 LHVKQGKQVHAR-FFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTM 178
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TD 184
I YA +G A LF + P ++ AWTA+++G VQ+ +A F M++ G+ TD
Sbjct: 179 ISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTD 238
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L V+ ACA L + + + + G+ + + + +ALIDMY+KC + A I
Sbjct: 239 PLVLSSVVGACANLALWELGKQMHGVVITLGYE--SCLFISNALIDMYAKCSDLVAAKYI 296
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +++V S++S+I+G A HG+A A+ L+ +MV KPN VTF+G++ ACSH GL
Sbjct: 297 FCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLV 356
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+SPS HY C++DL R+G L+EA ++ MPV P+ W ALL
Sbjct: 357 SKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLS 416
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+ H N ++A A+HL L+P+ +YI+LSNIYA AGMW+DVS+VR+L+ KK
Sbjct: 417 SCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKA 476
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYS ++ +G H F AG+ +HP EI + +L + ++ GY P+ SVL+D+ +E
Sbjct: 477 PGYSCIDLGKGS-HVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQE 535
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+R L HSE+LA+A+GLL PG +RI+KNLR+C DCH + S + REI VRD
Sbjct: 536 KERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAK 595
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DG CSC ++W
Sbjct: 596 RYHHFKDGNCSCNDFW 611
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 68/309 (22%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGY-------------------------------IL 29
+ + R VF+ + N WT +I GY +
Sbjct: 156 LPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQ 215
Query: 30 QGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDL 88
G+ D+ L+ MR EGI LS++ AC + LG+Q+H I L G+ S L
Sbjct: 216 SGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITL-GYESCL 274
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
++ N +I MY KC L ++ +F EM +DVVSWT +IV A +G E A L++E+ L
Sbjct: 275 FISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVL- 333
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
AGV+ + VT VG+I AC+ G++ +
Sbjct: 334 ------------------------------AGVKPNEVTFVGLIHACSHAGLVSKGRTLF 363
Query: 209 E-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMH 266
+ E G P ++ + L+D++S+ G +D+A + M + ++++++ H
Sbjct: 364 RTMVEDHGISP--SLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRH 421
Query: 267 GRAHAAIQL 275
G A+++
Sbjct: 422 GNTQMAVRI 430
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
L +++HAQ I+ G + NT++ Y KCG +
Sbjct: 21 LAKKLHAQ-IIKAGLNQHEPIPNTLLNAYGKCGLI------------------------- 54
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
+ A LF+ LP +D VAW +++T + +P A+ + G D+
Sbjct: 55 ------QDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFA 108
Query: 190 GVISACAQLGV--IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ACA LGV +K V S F ++ VV S+LIDMY+K G D +F
Sbjct: 109 SLVKACANLGVLHVKQGKQVHARFFLSPFS--DDDVVKSSLIDMYAKFGLPDYGRAVFDS 166
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+ N S+++MI G+A GR A +LF
Sbjct: 167 ISSLNSISWTTMISGYARSGRKFEAFRLF 195
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 46/80 (57%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + L++ Y KCG I DA ++F + +R+ +++S++ + R H A+ + ++ T
Sbjct: 40 IPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTG 99
Query: 284 TKPNGVTFIGVLTACSHVGL 303
P+ F ++ AC+++G+
Sbjct: 100 FHPDHFVFASLVKACANLGV 119
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 342/556 (61%), Gaps = 20/556 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVLD 67
FE++ ++ W ++I GY QG+ ++++++ M E + P +FTL+++ AC +
Sbjct: 231 FEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEK 290
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTEL 125
+++G+QIHA IL + VGN +I MY K G + +R + + +++++T L
Sbjct: 291 LNIGKQIHAY-ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSL 349
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y G+++ A +FN+L +D VAWTAM+ GYVQN +A+E F M G E +
Sbjct: 350 LDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNS 409
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++S + L ++++ + A +G +V +ALI MY+K G+I+ A R+F
Sbjct: 410 YTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT--NALIAMYAKTGNINVAKRVF 467
Query: 246 -VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
+ ++ + S++SMI+ A HG AI LF M+ KP+ +T++GVL+AC+HVGL
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + + P+ HYACM+DL GRAG L+EA +E MP+EP+ WG+LL
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+IH+N ++A++AA L ++P G Y+ L+N+Y++ G W++ ++ R+L+K G++K
Sbjct: 588 SCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+ + +H F D+ HP EI + + ++ + ++ G+ P+ SVL+D+ +E
Sbjct: 648 KGISWIH-IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEV 706
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSEKLA+AFGLL T +RIMKNLR+C DCH + S+++GREI+VRD
Sbjct: 707 KEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 767 RFHHFKDGSCSCRDYW 782
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 47/275 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F +++ ++ WTA+I GY+ G D++ L+ M EG P S+TL+A+ + +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWT 123
+ G+QIHA I G +S V N +I MY K G + +++VFD +P ++++VSWT
Sbjct: 423 TILEHGKQIHASAI-KAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWT 480
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+A A +G +EAI FERM G++
Sbjct: 481 SMIMALAQHG-------------------------------LGKEAINLFERMLSVGMKP 509
Query: 184 DYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSA-LIDMYSKCGSI 238
D++T VGV+SAC +G++ KY N + E+ E I + A +ID+Y + G +
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE------IEPTLSHYACMIDLYGRAGLL 563
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
+AY M + + ++ S++ +H A A
Sbjct: 564 QEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 32/286 (11%)
Query: 47 GIGPVSFTLSA-LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG 105
G P S A + + + D G+ +H Q I+ G +Y+ N ++ Y K G L
Sbjct: 4 GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQ-IIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+ VFDEMP + SW LI YA G+ E + L E+P D V+WTA++ GY Q
Sbjct: 63 FAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGL 122
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFG---- 217
AI F +M V T+ V+S+CA + K ++V ++ GS
Sbjct: 123 FDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATS 182
Query: 218 ---------------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ N+ +ALI +Y + G + A F M R++ S+
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHV 301
+SMI G++ G A+ +F M+ + KP+ T +L+AC+++
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANL 288
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P+ + + LI Y+K G+ + + R+ M + S++++I+G+ G AI +F
Sbjct: 72 PLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131
Query: 278 DMVKTETKPNGVTFIGVLTACS-----HVGLKCY------GVSPSTDHYACMVDLLGRAG 326
M+ P+ T VL++C+ +G K + G+ ++++ + G
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
A + ++M V+ N W AL+ ++ ++AA+ FE PD+
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALIS---LYMQSGQFELAASQ-FEKMPDR 237
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 335/555 (60%), Gaps = 17/555 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F++ N L A+ Y+ QG K+++ + M GI P ++ + +C+++
Sbjct: 290 KRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQL 349
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ H +L GF S + N +I MY+KC + ++FD M + VV+W +
Sbjct: 350 RNILWGKSCHGY-VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 408
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETD 184
+ Y NG++++A FN +P K+ V+W +++ VQ EAIE F MQ V D
Sbjct: 409 VAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVD 468
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT++ + SAC LG + A W+ E + +V +G+ L+DM+S+CG + A I
Sbjct: 469 GVTMMSIASACGHLGALDLAKWIYYYIEKNRIQL--DVRLGTTLVDMFSRCGDPESAMSI 526
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + R+V ++++ I AM G AI+LF +M++ KP+GV FIG LTAC H GL
Sbjct: 527 FNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLV 586
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +GVSP HY CMVDLLGRAG LEEAL++++ MP EPN +W +LL
Sbjct: 587 QQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLA 646
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++ N E+A AA + L P++ G+Y++LSN+YASAG W+D+++VR +K GL+K
Sbjct: 647 ACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 706
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG S ++ RG HEF +GD +HP +I+ L +L R G+ P+L +VL DV ++E
Sbjct: 707 PGTSVIQI-RGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQE 765
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K +L HSEKLA+AFGL++++ G T+RI+KNLR+C CH F AS+V REI++RDN
Sbjct: 766 KIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNN 825
Query: 533 RFHHFQDGKCSCGNY 547
RFH + GKCSC ++
Sbjct: 826 RFHFIRQGKCSCSDF 840
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 41/312 (13%)
Query: 3 SFPRLVFEQ-VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
SF + VFE Y F++ +LIRGY G K++I L+ M GI P +T
Sbjct: 83 SFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSV 142
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + D G QIH I + + DL+V N+++ Y +CG L C+RKVFDEM ER+VVS
Sbjct: 143 CAKSRDKGNGIQIHGLIIKMD-YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVS 201
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAG 180
WT +M+ GY + ++A++ F RM +
Sbjct: 202 WT-------------------------------SMICGYARREFAKDAVDLFFRMVRDED 230
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + VT+V VISACA+L ++ V + SG +N++++ SAL+DMY KC +ID
Sbjct: 231 VIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGI-EVNDLMI-SALVDMYMKCNAIDI 288
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F N+ ++M + G A+ + M+ + +P+ ++ + +++CS
Sbjct: 289 AKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQ 348
Query: 301 V-----GLKCYG 307
+ G C+G
Sbjct: 349 LRNILWGKSCHG 360
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 335/589 (56%), Gaps = 52/589 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF K KN F + ALIRG H ++I + M R GI P T + K+ +
Sbjct: 135 VFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFS 194
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---------- 117
LG IH IL G D +V +++ MYVK LG + KVFDE PER
Sbjct: 195 TELGMAIHCM-ILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLW 253
Query: 118 --------------------------DVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
+ VSW+ LI +A NGDM+ A LF+++P K+ V
Sbjct: 254 NVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVV 313
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WT MV G+ +N +A+ F +M GV + T+V +SACA++G ++ + +
Sbjct: 314 SWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYI 373
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
+ +G +G+AL+DMY+KCG+I+ A +F +Q+++ +++ MI G+A+HG +
Sbjct: 374 KDNGLHLTE--ALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQ 431
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKC-------YGVSPSTDHYACMV 319
AI F M+ KP+ V F+ +LTAC H +GL Y + PS HY +V
Sbjct: 432 AIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIV 491
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
D+LGR+G L+EAL+ +E+MP+ P+ +WGAL AC+ H+ ++A+ A N L +LEP G
Sbjct: 492 DMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTG 551
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
NYI LSN YA+ G W+D RVR L++ G+ KN G+S +E + G +H F +GD H +S
Sbjct: 552 NYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVE-GQVHRFVSGDHDHKDSK 610
Query: 440 EIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
I L +++ GY P VL+++ EEK+ +L +H EKLALAF L+ TSPG T+
Sbjct: 611 AICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTI 670
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
RI+KNL++C DCH M AS++ REI++RD RFHHF+DG CSC ++W
Sbjct: 671 RIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+LI + + + + +FN K+ + A++ G N+ AI +F M +G++
Sbjct: 117 TQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIK 176
Query: 183 TDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D +T V+ + A L + + C I G + V +L+DMY K + A
Sbjct: 177 PDRLTYPFVLKSMAGLFSTELGMAIHCMILRC---GIELDSFVRVSLVDMYVKVEKLGSA 233
Query: 242 YRIFVGMKQR-----NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+++F +R + ++ +I G G A++LF M K E V++ ++
Sbjct: 234 FKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKE----NVSWSTLID 289
Query: 297 ACSHVG-----LKCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM---PVEPNGGV 346
+ G ++ + P + + MVD R G E+AL M KM V PN
Sbjct: 290 GFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFT 349
Query: 347 WGALLGAC 354
+ L AC
Sbjct: 350 IVSALSAC 357
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 335/556 (60%), Gaps = 20/556 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F Q+ +++P W +++ ++S++ +M +++G+ P + + L KAC +
Sbjct: 60 LFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILG 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+HA T ++ + D V ++++ MY KCG R VFD + ++ +SWT +I
Sbjct: 120 AMKQGKQVHA-TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMI 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDY 185
YA +G A LF ++P+K+ ++WTA+++G VQ+ ++ F M+ G++ D
Sbjct: 179 SGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP 238
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L +I A A L V+ + + G+ +++ V +AL+DMY+KC + A +IF
Sbjct: 239 FILSSIIGASANLAVLGLGKQIHCLVILLGYE--SSLFVSNALVDMYAKCSDVLAAKKIF 296
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M QR++ S++S+I+G A HG A A+ L+ M+ T KPN VTF+G++ ACSHVGL
Sbjct: 297 GRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVS 356
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YG++PS HY C++DLL R+G LEEA +++ MP +P+ W ALL A
Sbjct: 357 KGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA 416
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C HRN I A+HL L+P+ YI+LSNIYASA MW+ VS+VRRL+ +KK P
Sbjct: 417 CNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEP 476
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
GYS + G + F AG+ +HP EI L +L ++ GY P+ SVL+D+ +E
Sbjct: 477 GYSCIVLGKESQV--FLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQE 534
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+R L HSE+LA+A+GLL PG + I+KNLR+C DCH + S ++ REIVVRD
Sbjct: 535 KERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDAN 594
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DGKCSC N+W
Sbjct: 595 RYHHFKDGKCSCNNFW 610
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 67/276 (24%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY-------------------------------ILQGHLK 34
R+VF+ + KN WTA+I GY + G+
Sbjct: 160 RVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWV 219
Query: 35 DSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
DS L+ MR +GI V F LS++ A + + LG+QIH ILL G+ S L+V N
Sbjct: 220 DSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILL-GYESSLFVSNA 278
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY KC + ++K+F M +RD+VSWT +IV A +G E A L+N
Sbjct: 279 LVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYN---------- 328
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC-EIAE 212
RM G++ + VT VG+I AC+ +G++ + + +
Sbjct: 329 ---------------------RMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
G P ++ + L+D+ S+ G +++A + M
Sbjct: 368 DYGINP--SLQHYTCLLDLLSRSGHLEEAENLIKAM 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+AC +G+++H I+ G + N +I MY KCG +
Sbjct: 10 LQACARHQSPPIGKKLHCH-IIKTGIDQCKSLSNNLINMYGKCGLI-------------- 54
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-Q 177
+ A LFN+LP +D ++W +++T Q P + F M +
Sbjct: 55 -----------------QDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFK 97
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI-NNVVVGSALIDMYSKCG 236
G++ D+ ++ ACA LG +K ++ P+ ++ VV S+L+DMY+KCG
Sbjct: 98 QDGLQPDHYVFACLVKACAILGAMKQGK---QVHATFIVSPVSDDDVVKSSLVDMYAKCG 154
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
D +F + +N S+++MI G+A GR AIQLF M
Sbjct: 155 LPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKM 197
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + LI+MY KCG I DA +F + R+ S++S++ H + +F M K +
Sbjct: 40 LSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQD 99
Query: 284 -TKPNGVTFIGVLTACSHVGLKCYG--------VSPSTDH---YACMVDLLGRAGCLEEA 331
+P+ F ++ AC+ +G G VSP +D + +VD+ + G L +
Sbjct: 100 GLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCG-LPDI 158
Query: 332 LKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYA 389
++V N W A++ G Q R ++ A LF+ P K + ++ L +
Sbjct: 159 GRVVFDSISSKNSISWTAMISGYAQSGR-----KLDAIQLFQKMPVKNLLSWTALISGLV 213
Query: 390 SAGMWDD 396
+G W D
Sbjct: 214 QSGNWVD 220
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/564 (39%), Positives = 338/564 (59%), Gaps = 23/564 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGY-ILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFK 60
S+ +F+Q+ + F++ +I+ + ++ +S+ ++ SM R G P +T +FK
Sbjct: 66 SYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFK 125
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L V G+QI I +G S+L+V N MI MY G + +R+VFD ++D+
Sbjct: 126 ACGNGLGVLEGEQIRVHAIKIG-LESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLY 184
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +I Y +G++ A +F+E+ +D V+WT ++ GYVQ +EA++ F M G
Sbjct: 185 SWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTG 244
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ TL ++ACA L + W+ + S +N ++ S L+DMY+KCG ID
Sbjct: 245 PPPNEFTLASALAACANLVALDQGRWIHVYIDKSEI-KMNERLLAS-LLDMYAKCGEIDF 302
Query: 241 AYRIF---VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
A ++F G+K + V+ +++MI G+AMHG++ AI LF M + PN VTF+ +L A
Sbjct: 303 AAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA 361
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH L YG+ P +HY CMVDLLGR+G L+EA + V MP+ P+
Sbjct: 362 CSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDAT 421
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+WGALLGAC+IH++ E Q + EL+ D IG +++L+N+Y+++G WD+ VR+ ++
Sbjct: 422 IWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIE 481
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
++G KK PG S +E + GV H+F GD +HP + ++ L ++ +L+ GY P VL
Sbjct: 482 VSGRKKTPGCSSIELN-GVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVL 540
Query: 466 YDVSDEEKKRI-LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
D+ DEE K L HSEKLA+AFGL+ T PG +RI+KNLR+C DCH S+V R
Sbjct: 541 LDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKR 600
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI+VRD +R+HHF+DG CSC +YW
Sbjct: 601 EIIVRDRIRYHHFKDGFCSCKDYW 624
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 335/555 (60%), Gaps = 22/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q + FL+TA I + G + LY + I P FT S+L K+C+
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS---- 141
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ IH +L G D YV ++ +Y K G + ++KVFD MPER +VS T +I
Sbjct: 142 TKSGKLIHTH-VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV-ETDYV 186
YA G++E+A LF+ + +D V+W M+ GY Q+ P +A+ F+++ G + D +
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +SAC+Q+G ++ W+ + S NV V + LIDMYSKCGS+++A +F
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRL--NVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL-- 303
++++ ++++MI G+AMHG + A++LF +M T +P +TFIG L AC+H GL
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ P +HY C+V LLGRAG L+ A + ++ M ++ + +W ++LG+
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H + + + A +L L G Y++LSNIYAS G ++ V++VR L+K G+ K P
Sbjct: 439 CKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + V HEFRAGD H S EI L + +R+++ GY PN +VL D+ + EK
Sbjct: 499 GISTIEIENKV-HEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEK 557
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ L HSE+LA+A+GL++T PG+ ++I KNLR+C DCH S++ GR+IV+RD R
Sbjct: 558 EQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNR 617
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSCG++W
Sbjct: 618 FHHFTDGSCSCGDFW 632
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 34/264 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R +F+ + ++ W +I GY G D++ L+ + EG P T+ A AC++
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + G+ IH + ++ V +I MY KCG L + VF++ P +D+V+W
Sbjct: 272 IGALETGRWIHV-FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I YA +G + A LFNE+ G++
Sbjct: 331 MIAGYAMHGYSQDALRLFNEM------------------------------QGITGLQPT 360
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T +G + ACA G++ + E + G +G + L+ + + G + AY
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFE-SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 245 FVGMK-QRNVFSYSSMILGFAMHG 267
M + +SS++ +HG
Sbjct: 420 IKNMNMDADSVLWSSVLGSCKLHG 443
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA++G + + LF++ D +TA + N +A + ++ + + + T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 188 LVGVISACAQ--------------LGVIKY-ANWVCEIAEGSG----------FGPINNV 222
++ +C+ LG+ Y A + ++ G P ++
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-K 281
V +A+I Y+K G+++ A +F M +R++ S++ MI G+A HG + A+ LF ++ +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 282 TETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEE 330
+ KP+ +T + L+ACS HV +K + + ++D+ + G LEE
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIH 357
A+ + P + W A++ +H
Sbjct: 313 AVLVFNDTP-RKDIVAWNAMIAGYAMH 338
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTEV 65
LVF K+ W A+I GY + G+ +D++ L+ M+ G+ P T +AC
Sbjct: 315 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G +I G + ++ + + G L + + M + D V W+
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 434
Query: 125 LIVAYANNGD 134
++ + +GD
Sbjct: 435 VLGSCKLHGD 444
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 329/563 (58%), Gaps = 61/563 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ +N WTA+I GY +G +++ L+ M R P FT + + +CT
Sbjct: 65 RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+QIH+ I + + ++VG++++ MY K
Sbjct: 125 SGFELGRQIHSH-IFKRNYENHIFVGSSLLDMYAKA------------------------ 159
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
G + A G+F LP +D V+ TA+++GY Q EA+E F R+Q G+ ++Y
Sbjct: 160 -------GRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNY 212
Query: 186 VTLVGVISACAQLGVIKYANWV------CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
VT +++A + L + + V CE+ P VV+ ++LIDMYSKCG+++
Sbjct: 213 VTYASLLTALSGLAALDHGKQVHSHVLRCEL-------PFY-VVLQNSLIDMYSKCGNLN 264
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTAC 298
A +IF M R V S+++M++G++ HG+ ++LF M + + KP+ VTF+ VL+ C
Sbjct: 265 YARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGC 324
Query: 299 SHVGLKCYG-------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
SH GL+ G + +HY C++DLLGRAG +EEA ++++KMP EP
Sbjct: 325 SHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAA 384
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+WG+LLGAC++H N I + L E+EP+ GNY+ILSN+YASAG W+DV VR L+
Sbjct: 385 IWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMM 444
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
+ K PG SW+E D+ IH F A D +HP E+ + +LL + + GY P+ VL
Sbjct: 445 EKAVIKEPGRSWIELDQ-TIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVL 503
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
YDV +E+K++IL+ HSEKLALAFGL++TS G +R++KNLRIC DCH F S+V GR+
Sbjct: 504 YDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQ 563
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
+ +RD RFHH G CSCG+YW
Sbjct: 564 VSIRDKNRFHHVAGGICSCGDYW 586
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 21/134 (15%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + + LI +Y+KC + A +F M++RNV S+++MI G++ G A A+ LF M++
Sbjct: 45 VYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLR 104
Query: 282 TETKPNGVTFIGVLTAC-------------SHVGLKCYGVSPSTDHY---ACMVDLLGRA 325
++T+PN TF VL++C SH+ + Y +H + ++D+ +A
Sbjct: 105 SDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNY-----ENHIFVGSSLLDMYAKA 159
Query: 326 GCLEEALKMVEKMP 339
G + EA + E +P
Sbjct: 160 GRIHEARGVFECLP 173
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 314/550 (57%), Gaps = 26/550 (4%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVS----LGQQI 74
L ALIR ++ LY + R G+ P TL +L K+ V L +
Sbjct: 39 LHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTV 98
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK---VFDEMPERDVVSWTELIVAYAN 131
H + LG + V N +I V GFLG + D ++ LI AYA
Sbjct: 99 HTHAVKLG-LDRFVLVSNALI--RVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYAR 155
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G + A LF+E+P ++ V+W+AMV GYVQ REA+ F RMQ V D LVGV
Sbjct: 156 AGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGV 215
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
++ACAQ G ++ WV + G N+ G+AL+DMYSKCG + A +F M+ +
Sbjct: 216 LAACAQHGALEQGKWVHGYLKAHGIKI--NLFFGTALVDMYSKCGEVQLAMDVFERMQYK 273
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
NV ++++MI G AMHGR A+ LF M + +P+ + FIGVL AC+H GL
Sbjct: 274 NVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELF 333
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
+ YG+ P +HY CMVDLL R G L EA +M++KMP+EP+ +WGAL+ C+ H+N
Sbjct: 334 DSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKN 393
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
E A+ A H LEPDK G Y++LSNIYA++G +R L++ G+ K PG S +E
Sbjct: 394 VEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVE 453
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKKRILM 478
+ GVIH+F GDL+HP +I ++ R++ +GY P+++ VL D+ +EEK+ L
Sbjct: 454 VN-GVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALS 512
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AF L++ S +RI KNLR+C DCH S+V GREIVVRD RFH F+
Sbjct: 513 RHSEKLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFK 572
Query: 539 DGKCSCGNYW 548
+G CSC +YW
Sbjct: 573 EGTCSCKDYW 582
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W+A++ GY+ G ++++ ++ M+ E + P L + AC +
Sbjct: 163 RALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQH 222
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + G +L+ G ++ MY KCG + + VF+ M ++V++W
Sbjct: 223 GALEQGKWVHGY-LKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAW--- 278
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T M+ G + + EA+ F +M+ +G+ D
Sbjct: 279 ----------------------------TTMIKGLAMHGRGSEAVMLFAQMESSGIRPDD 310
Query: 186 VTLVGVISACAQLGVI 201
+ +GV+ AC G++
Sbjct: 311 IAFIGVLCACTHAGLV 326
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE+++YKN WT +I+G + G +++ L+ M GI P + ACT
Sbjct: 266 VFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGL 325
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G+++ + G + M+ + + GFL ++++ +MP E D + W L+
Sbjct: 326 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALM 385
Query: 127 VAYANNGDMESA 138
+ ++E A
Sbjct: 386 AGCRFHKNVEFA 397
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 308/487 (63%), Gaps = 16/487 (3%)
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA+ + D+ NTMI Y G + ++++FDEMPER++VSW ++ + G+
Sbjct: 279 HARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGN 338
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+E A GLF+E+P +D V+W +M+ Y Q KP EA+ F++M+ GV+ T+V ++SA
Sbjct: 339 VEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSA 398
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA LG + + + N +VG+AL+DMY+KCG I A ++F M+ ++V
Sbjct: 399 CAHLGALDKGLHLHTYINDNRIEV--NSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 456
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------LKC- 305
+++++I G A+HG A QLF +M + +PN +TF+ +L+ACSH G L C
Sbjct: 457 AWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 516
Query: 306 ---YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG+ P +HY C++DLL RAG LEEA++++ MP+EPN GALLG C+IH N E+
Sbjct: 517 SSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFEL 576
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
++ L L+P G YI+LSNIYA+A WDD +VR L+K+ G+ K PG S +E +
Sbjct: 577 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE-LK 635
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKKRILMTHS 481
G++H F AGD +HP S +I + L ++ RL+ A GY + +VL D+ +E+K+ L HS
Sbjct: 636 GMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHS 695
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+A+GLL +RI+KNLR+C DCH + S+V GREI+VRD RFHHF+DG+
Sbjct: 696 EKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGE 755
Query: 542 CSCGNYW 548
CSC ++W
Sbjct: 756 CSCLDFW 762
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/555 (38%), Positives = 330/555 (59%), Gaps = 34/555 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ WT ++ GY+ G+ +S+ L+ MR E + P L + AC +
Sbjct: 322 RQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHL 381
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D LG+ +HA I+ G D ++GN ++ +Y KCG L + + F+++P + SW +
Sbjct: 382 EDFDLGRSVHA-FIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSM 440
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + +G ++ A FN++P KD V+W MV YV++ E+ E F +MQ + V+ D
Sbjct: 441 LDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDK 500
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL+ ++S+CA++G + + WV E + G + ++G+ALIDMY KCG ++ AY IF
Sbjct: 501 TTLISLLSSCAKVGALNHGIWVNVYIEKNEIGI--DAMLGTALIDMYGKCGCVEMAYEIF 558
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ ++NVF +++M+ +AM G+A AI L+ +M + KP+ VTFI +L ACSH GL
Sbjct: 559 TQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVD 618
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y + P+ HY CMVDLLGR G LEE +K +E+MP+EP+ +W +L+ A
Sbjct: 619 EGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRA 678
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H N E+A+ A L E++P G +++LSNIYA AG WDDVS+VR L TG+ K P
Sbjct: 679 CRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQP 738
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G++ +E + GV+HEF A +L S +I L D+ RL ++ L D + +
Sbjct: 739 GFTMIEQN-GVVHEFVASNLV---SADILCMLQDIERRLL-------VKQELSDTTSQ-- 785
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
HSE+LA+AFGL+ + +R++ ++R+C DCH M SQ REIV+RDN R
Sbjct: 786 ------HSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYR 839
Query: 534 FHHFQDGKCSCGNYW 548
FH F DG CSC +YW
Sbjct: 840 FHRFTDGHCSCKDYW 854
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 196/396 (49%), Gaps = 60/396 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ +++ W +I Y+L+G ++++ L+ M G+ P T+ +L C ++ D
Sbjct: 190 LFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKD 249
Query: 68 VSLGQQIHAQTILLGGFTSDLYVG----NTMIGMYVKCGFLGCSRKVFD--EMPERDVVS 121
+ +G+++H + + L++ N ++ MY KCG + + + + E DVV
Sbjct: 250 LEMGKRLHLYIV-----DNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVL 304
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
WT L+ Y + ++ A LF+++ + V+WT M++GYVQ E++E F++M++ V
Sbjct: 305 WTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENV 364
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D V LV V+SAC L V A +G + + +G+AL+D+Y+KCG +D+A
Sbjct: 365 IPDEVALVTVLSACVHLEDFDLGRSV--HAFIVTYGMLVDGFLGNALLDLYAKCGKLDEA 422
Query: 242 YRIFVGM-------------------------------KQRNVFSYSSMILGFAMHGRAH 270
R F + ++++ S+++M+ + H +
Sbjct: 423 LRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFN 482
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY-------------AC 317
+ ++F M + KP+ T I +L++C+ VG +G+ + Y
Sbjct: 483 ESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNV--YIEKNEIGIDAMLGTA 540
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++D+ G+ GC+E A ++ ++ +E N VW A++ A
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 76/381 (19%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+W L+ + +G ++ + Y M +G+ T L AC + DV LG ++H +
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
IL GF + + N ++G+Y KCG L ++F++M R
Sbjct: 159 -ILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR-------------------- 197
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
D ++W M++ YV REA++ F+ M +GV D +T+V ++S CA+
Sbjct: 198 -----------DVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAK 246
Query: 198 LG-----------VIKYANWV------CEIAEGSGFGPIN--------------NVVVGS 226
L ++ W+ C + S G ++ +VV+ +
Sbjct: 247 LKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWT 306
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
L+ Y K ID A ++F M +R++ S+++M+ G+ G +++LF M P
Sbjct: 307 TLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIP 366
Query: 287 NGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+ V + VL+AC H+ + YG+ ++DL + G L+EAL+
Sbjct: 367 DEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTF 426
Query: 336 EKMPVEPNGGVWGALL-GACQ 355
E++P + + W ++L G C+
Sbjct: 427 EQLPCK-SAASWNSMLDGFCR 446
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ + W ++ ++ P+E +E + M GV D T +I AC + +K + V
Sbjct: 97 ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
GFG N + + L+ +YSKCG + + ++F M R+V S+++MI + + G
Sbjct: 157 GRILKCGFG--RNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPST----DHYAC 317
A+ LF +M+ + P+ +T + +++ C+ + L Y V C
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274
Query: 318 MVDLLGRAGCLEEA 331
+VD+ + G ++EA
Sbjct: 275 LVDMYSKCGKMDEA 288
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 334/558 (59%), Gaps = 32/558 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ +N WT LI G++ G +S+ L+ MR E + F L+ + C+
Sbjct: 349 RRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR 408
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ L +Q+H+ + L G T + + N++I MY KCG L + +F M ERD+VSWT +
Sbjct: 409 MDMCLARQLHSLS-LKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGM 467
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
+ AY+ G++ A F+ + ++ + W AM+ Y+Q+ + ++ + M V D
Sbjct: 468 LTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPD 527
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA +G K + + G I + V +A+I MYSKCG I +A +I
Sbjct: 528 WVTYVTLFRGCADMGANKLGDQI--TGHTVKVGLILDTSVMNAVITMYSKCGRISEARKI 585
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++++ S+++MI G++ HG AI++F DM+K KP+ ++++ VL++CSH GL
Sbjct: 586 FDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLV 645
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + VSP +H++CMVDLL RAG L EA ++++MP++P VWGALL
Sbjct: 646 QEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLS 705
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ H N E+A++AA HLF+L+ G Y++L+ IYA AG D ++VR+L++ G+KKN
Sbjct: 706 ACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKN 765
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY--QPNLRSVLYDVSD 470
PGYSW+E + +H F+A D++HP I++ L +L++++ GY +LRS ++
Sbjct: 766 PGYSWMEV-KNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIH---- 820
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
HSEKLA+AFG++ + IMKNLRIC DCH + S V GRE V+RD
Sbjct: 821 ---------HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRD 871
Query: 531 NMRFHHFQDGKCSCGNYW 548
+RFHHF+ G CSCG+YW
Sbjct: 872 AVRFHHFKGGSCSCGDYW 889
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 16/300 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F ++ ++ W L+ GY G D++ + SMRR G P +FT K+C
Sbjct: 117 LFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCG--- 173
Query: 67 DVSLG-QQIHAQTILLG-----GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+LG ++ Q LLG GF D V ++ M+V+CG + + K F ++ V
Sbjct: 174 --ALGWHEVALQ--LLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVF 229
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++ YA + ++ A LF +P +D V+W MV+ Q+ + REA+ M G
Sbjct: 230 CRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRG 289
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V D T ++ACA+L + + + A+ P + V SA++++Y+KCG +
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLH--AQVIRSLPCIDPYVASAMVELYAKCGCFKE 347
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F ++ RN S++ +I GF +G +++LF M + +++ CS+
Sbjct: 348 ARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN 407
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 155/346 (44%), Gaps = 48/346 (13%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V+ L+ ++C ++ + +H + + +G S +++ NT++ Y+ CG L +R +
Sbjct: 27 VTQALADALRSCGARGALAGARALHGRLVSVG-LASAVFLQNTLLHAYLSCGALPDARGL 85
Query: 111 FD-EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
++ E +V++ ++ YA G + A LF +P +D +W +++GY Q+ + +A
Sbjct: 86 LRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDA 145
Query: 170 IEYFERMQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
+E F M+ +G + T + +C LG + A + + GF +V G +
Sbjct: 146 MESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATG--I 203
Query: 229 IDMYSKCGSID-------------------------------DAYRIFVGMKQRNVFSYS 257
+DM+ +CG++D A +F M +R+V S++
Sbjct: 204 VDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWN 263
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-------- 309
M+ + GRA A+ + DM + + T+ LTAC+ + +G
Sbjct: 264 MMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS 323
Query: 310 -PSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P D Y + MV+L + GC +EA ++ + + N W L+G
Sbjct: 324 LPCIDPYVASAMVELYAKCGCFKEARRVFSSLR-DRNTVSWTVLIG 368
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/555 (40%), Positives = 333/555 (60%), Gaps = 19/555 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ KN W+A+I Y G + ++ L+ M G+ P TL++L AC
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++ +Q+HAQ + G +L V N ++ Y L + +FD M RD VSW+ +
Sbjct: 374 RNLTQVRQVHAQASV-HGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVM 432
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +A GD + G F EL ++ + NA E++ F++M+ GV D
Sbjct: 433 VGGFAKVGDYMNCFGTFREL-IRCGARPDNYTLPFCGNAN--ESLVLFDKMREEGVVPDK 489
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V +V V+ ACA+LG + A + + + F +V++G+A+IDM++KCG ++ A IF
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL--DVILGTAMIDMHAKCGCVESAREIF 547
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+++NV S+S+MI + HG+ A+ LF M+++ PN +T + +L ACSH GL
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y V HY C+VDLLGRAG L+EALK++E M VE + G+WGA LGA
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H++ +A+ AA L EL+P G+YI+LSNIYA+AG W+DV++ R L+ LKK P
Sbjct: 668 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 727
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G++W+E D H+F GD THP S EI + L L ++L+ GY P+ VL+DV +E K
Sbjct: 728 GWTWIEVDNKS-HQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 786
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
IL +HSEKLA+AFGL+ T +RI+KNLR+C DCH F S + GR I+VRD R
Sbjct: 787 IGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 846
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 847 FHHFKEGACSCGDYW 861
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 55/291 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W+ ++ G+ G + + + R G P ++TL + +AC ++ +
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + ++ MYVKC + +R +FD+M ERD+V+WT
Sbjct: 195 LQMA----------------------LVDMYVKCREIEDARFLFDKMQERDLVTWT---- 228
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M+ GY + K E++ FE+M+ GV D V
Sbjct: 229 ---------------------------VMIGGYAECGKANESLVLFEKMREEGVVPDKVA 261
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ ACA+LG + A + + + F +V++G+A+IDMY+KCG ++ A IF
Sbjct: 262 MVTVVFACAKLGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCVESAREIFDR 319
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
M+++NV S+S+MI + HG+ A+ LF M+ + P+ +T +L AC
Sbjct: 320 MEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 170/393 (43%), Gaps = 78/393 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ ++ WT +I GY G +S+ L+ MR EG+ P + + AC +
Sbjct: 213 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK- 271
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +I I F D+ +G MI MY KC GC
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC---GC------------------- 309
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ESA +F+ + K+ ++W+AM+ Y + + R+A++ F M +G+ D
Sbjct: 310 ---------VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 360
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+TL ++ AC + V A+ S G + N++V + L+ YS ++DDAY +F
Sbjct: 361 ITLASLLYACINCRNLTQVRQV--HAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLF 418
Query: 246 VGMKQRNVFSYSSMILGFA----------------------------MHGRAHAAIQLFG 277
GM R+ S+S M+ GFA G A+ ++ LF
Sbjct: 419 DGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFD 478
Query: 278 DMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY-------------ACMVDLLGR 324
M + P+ V + V+ AC+ +G + + D Y M+D+ +
Sbjct: 479 KMREEGVVPDKVAMVTVVFACAKLG--AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAK 536
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
GC+E A ++ ++M E N W A++ A H
Sbjct: 537 CGCVESAREIFDRME-EKNVISWSAMIAAYGYH 568
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 39/253 (15%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
++V +LI Y+ ++ A GLF+ + ++D V+W+ MV G+ + F +
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G D TL VI AC L ++ A L+DMY KC
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQMA-----------------------LVDMYVKCRE 208
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+DA +F M++R++ +++ MI G+A G+A+ ++ LF M + P+ V + V+ A
Sbjct: 209 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 268
Query: 298 CSHVGLKCYGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C+ +G + D Y M+D+ + GC+E A ++ ++M E N
Sbjct: 269 CAKLG--AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNV 325
Query: 345 GVWGALLGACQIH 357
W A++ A H
Sbjct: 326 ISWSAMIAAYGYH 338
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
A+ S G + N+VV + LI YS ++DDAY +F GM R+ S+S M+ GFA G
Sbjct: 102 AQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYI 161
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEE 330
F ++++ +P+ T V+ AC + + +VD+ + +E+
Sbjct: 162 NCFGTFRELIRCGARPDNYTLPFVIRACRDL----------KNLQMALVDMYVKCREIED 211
Query: 331 ALKMVEKMPVEPNGGVWGALLG 352
A + +KM E + W ++G
Sbjct: 212 ARFLFDKMQ-ERDLVTWTVMIG 232
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 332/559 (59%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F V + FL+ +L++ G D++ Y M G ++T +++ KAC
Sbjct: 76 TYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC 135
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG++IH+ +++ G+ SD+YV +I +Y K
Sbjct: 136 ADLSALRLGKEIHSH-VMVCGYGSDMYVQAALIALYAKAS-------------------- 174
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
DM+ A +F+ +P + +AW ++++GY QN P+E+I F M +G +
Sbjct: 175 -----------DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V ++S+C+QLG + + W+ + A+G+GF NVV+G++LI+MY++CG++ A
Sbjct: 224 PDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDL--NVVLGTSLINMYTRCGNVSKAR 281
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F MK+RNV ++++MI G+ MHG A++LF +M +PN +TF+ VL+AC+H G
Sbjct: 282 EVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSG 341
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK-MPVEPNGGVWGA 349
L + YG+ P +H CMVD+ GRAG L +A + ++K +P EP VW +
Sbjct: 342 LIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 401
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++HRN ++ A H+ +EP+ G+Y++LSNIYA AG D V VR ++ L
Sbjct: 402 MLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRL 461
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS +E +R + F GD +HP + I + L +L+ R GY P S+++D+
Sbjct: 462 KKQVGYSTIEINRKT-YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLE 520
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EE+ L HSEKLALAFGLL T+ G T+RI+KNLRICEDCH + S + REI+VR
Sbjct: 521 EEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVR 580
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +YW
Sbjct: 581 DKFRFHHFKDGSCSCLDYW 599
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 341/556 (61%), Gaps = 20/556 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVLD 67
FE++ ++ W ++I GY QG+ +++ ++ M E + P +FTL+++ AC +
Sbjct: 231 FEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEK 290
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTEL 125
+++G+QIHA IL + VGN +I MY K G + +R + + +++++T L
Sbjct: 291 LNIGKQIHAY-ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSL 349
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y G+++ A +FN+L +D VAWTAM+ GYVQN +A+E F M G E +
Sbjct: 350 LDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNS 409
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++S + L ++++ + A +G +V +ALI MY+K G+I+ A R+F
Sbjct: 410 YTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT--NALIAMYAKTGNINVAKRVF 467
Query: 246 -VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
+ ++ + S++SMI+ A HG AI LF M+ KP+ +T++GVL+AC+HVGL
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + + P+ HYACM+DL GRAG L+EA +E MP+EP+ WG+LL
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+IH+N ++A++AA L ++P G Y+ L+N+Y++ G W++ ++ R+L+K G++K
Sbjct: 588 SCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+ + +H F D+ HP EI + + ++ + ++ G+ P+ SVL+D+ +E
Sbjct: 648 KGISWIH-IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEV 706
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSEKLA+AFGLL T +RIMKNLR+C DCH + S+++GREI+VRD
Sbjct: 707 KEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 767 RFHHFKDGSCSCRDYW 782
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 45/274 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F +++ ++ WTA+I GY+ G D++ L+ M EG P S+TL+A+ + +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSL 422
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWT 123
+ G+QIHA I G +S V N +I MY K G + +++VFD +P ++++VSWT
Sbjct: 423 TILEHGKQIHASAI-KAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWT 480
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+A A +G +EAI FERM G++
Sbjct: 481 SMIMALAQHG-------------------------------LGKEAINLFERMLSVGMKP 509
Query: 184 DYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D++T VGV+SAC +G++ KY N + E+ E P + + +ID+Y + G +
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE---IEP--TLSHYACMIDLYGRAGLLQ 564
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
+AY M + + ++ S++ +H A A
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 32/286 (11%)
Query: 47 GIGPVSFTLSA-LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG 105
G P S A + + + D G+ +H Q I+ G +Y+ N ++ Y K G L
Sbjct: 4 GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQ-IIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+ VFDEMP + SW LI YA G+ E + L E+P D V+WTA++ GY Q
Sbjct: 63 FAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGL 122
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFG---- 217
AI F +M V T+ V+S+CA + K ++V ++ GS
Sbjct: 123 FDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATS 182
Query: 218 ---------------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ N+ +ALI +Y + G + A F M R++ S+
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHV 301
+SMI G++ G A+ +F M+ + KP+ T +L+AC+++
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANL 288
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P+ + + LI Y+K G+ + + R+ M + S++++I+G+ G AI +F
Sbjct: 72 PLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131
Query: 278 DMVKTETKPNGVTFIGVLTACS-----HVGLKCY------GVSPSTDHYACMVDLLGRAG 326
M+ P+ T VL++C+ +G K + G+ ++++ + G
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
A + ++M V+ N W AL+ ++ ++AA+ FE PD+
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALIS---LYMQSGQFELAASQ-FEKMPDR 237
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 327/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+ + K+ +W ++I GY G+ +++SL+ +M +EG+ TLS + K+
Sbjct: 344 RMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGS 403
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+Q+H +I G+ D YV N+++ Y KC L
Sbjct: 404 QANGFCEQVHTISIK-SGYQYDGYVANSLLDSYGKCCLL--------------------- 441
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F P +D VA+T+M+T Y Q EA++ + RMQ ++ D
Sbjct: 442 ----------EDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDA 491
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +ACA L + + G +++V G++L++MY+KCGSIDDA IF
Sbjct: 492 FIFSSLFNACANLSAYEQGKQIHVHVLKCGL--LSDVFAGNSLVNMYAKCGSIDDASCIF 549
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ R + S+S+MI G A HG A+QLF M+K PN +T + VL+AC+H GL
Sbjct: 550 NEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVT 609
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G++P+ +HYACMVD+LGR G L+EA+ +V++MP + + VWGALLGA
Sbjct: 610 EARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGA 669
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH+N E+ + AA L LEP+K G +I+L+NIYAS GMWD+V++VRR +K + +KK P
Sbjct: 670 ARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEP 729
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + ++ F GD +HP S EI L DL +RL + GY P + + L+DV EK
Sbjct: 730 GMSWIEL-KDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEK 788
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L HSEKLA+AFGL+ T PGA +R+ KNLR+C DCH S+V REI+VRD R
Sbjct: 789 EQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINR 848
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 849 FHHFRDGSCSCGDYW 863
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 186/447 (41%), Gaps = 84/447 (18%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH---- 75
W+ALI GY+ G ++++ Y M G FT S++ K C+ ++ LG+QIH
Sbjct: 116 WSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVAL 175
Query: 76 AQTILLGGFTSDLYVGNTMI----------------GMYVKCGFLGCSRKVFDEMPERDV 119
++ G + + + +T++ G +K G+ + D
Sbjct: 176 VTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGY------------DSDP 223
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
S L+ YA +G E+A +F E+P D V+W A++ G V + K A++ +M
Sbjct: 224 FSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSY 283
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V TL + ACA +G++K + P + VG LIDMYSKCG +
Sbjct: 284 RVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP--DSFVGVGLIDMYSKCGLLQ 341
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-- 297
DA +F M ++V ++S+I G++ G A+ LF +M K + N T +L +
Sbjct: 342 DARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA 401
Query: 298 -------CSHV-------------------------------GLKCYGVSPSTD--HYAC 317
C V K + V P+ D Y
Sbjct: 402 GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTS 461
Query: 318 MVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-- 372
M+ + G EEALKM +M ++P+ ++ +L AC E + H+ +
Sbjct: 462 MITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCG 521
Query: 373 -LEPDKIGNYIILSNIYASAGMWDDVS 398
L GN ++ N+YA G DD S
Sbjct: 522 LLSDVFAGNSLV--NMYAKCGSIDDAS 546
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 27/305 (8%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
DVS G IHA+ I L + N ++ +Y KC +RK+ + E D+VSW+ LI
Sbjct: 65 DVSSGMAIHARIIR----LGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALI 120
Query: 127 VAYANNGDMESAGGLFNELPL----KDKVAWTAMVTG-----YVQNAKPREAIEYFERMQ 177
Y NG E A + E+ L ++ +++++ G ++ K + M
Sbjct: 121 SGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMI 180
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G+ + +L V++ACA L Y V G+ ++ +AL+DMY+K G
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD--SDPFSANALLDMYAKSGC 238
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ A +F + + ++ S++++I G +H + A++L G M P+ T L A
Sbjct: 239 PEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKA 298
Query: 298 CSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
C+ +GL G + P + ++D+ + G L++A + + MP + + V
Sbjct: 299 CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK-DVIV 357
Query: 347 WGALL 351
W +++
Sbjct: 358 WNSII 362
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 332/559 (59%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F V + FL+ +L++ G D++ Y M G ++T +++ KAC
Sbjct: 140 TYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC 199
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG++IH+ +++ G+ SD+YV +I +Y K
Sbjct: 200 ADLSALRLGKEIHSH-VMVCGYGSDMYVQAALIALYAKAS-------------------- 238
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
DM+ A +F+ +P + +AW ++++GY QN P+E+I F M +G +
Sbjct: 239 -----------DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 287
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V ++S+C+QLG + + W+ + A+G+GF NVV+G++LI+MY++CG++ A
Sbjct: 288 PDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDL--NVVLGTSLINMYTRCGNVSKAR 345
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F MK+RNV ++++MI G+ MHG A++LF +M +PN +TF+ VL+AC+H G
Sbjct: 346 EVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSG 405
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK-MPVEPNGGVWGA 349
L + YG+ P +H CMVD+ GRAG L +A + ++K +P EP VW +
Sbjct: 406 LIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 465
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++HRN ++ A H+ +EP+ G+Y++LSNIYA AG D V VR ++ L
Sbjct: 466 MLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRL 525
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS +E +R + F GD +HP + I + L +L+ R GY P S+++D+
Sbjct: 526 KKQVGYSTIEINRKT-YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLE 584
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EE+ L HSEKLALAFGLL T+ G T+RI+KNLRICEDCH + S + REI+VR
Sbjct: 585 EEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVR 644
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +YW
Sbjct: 645 DKFRFHHFKDGSCSCLDYW 663
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/553 (39%), Positives = 322/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ W AL+ G+ + ++ M EG P +T ++ ++C+ + D
Sbjct: 488 VFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+Q+HAQ I+ + +VG ++ MY K FL
Sbjct: 548 VDLGKQVHAQ-IVKNSLDGNDFVGTALVDMYAKNRFL----------------------- 583
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A +FN L +D AWT +V GY Q+ + +A++ F +MQ GV+ + T
Sbjct: 584 --------EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 635
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +S C+++ + + +A +G ++ V SAL+DMY+KCG ++DA +F G
Sbjct: 636 LASSLSGCSRIATLDSGRQLHSMAIKAG--QSGDMFVASALVDMYAKCGCVEDAEVVFDG 693
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ R+ S++++I G++ HG+ A++ F M+ T P+ VTFIGVL+ACSH+GL
Sbjct: 694 LVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 753
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG++P+ +HYACMVD+LGRAG E +E+M + N +W +LGAC+
Sbjct: 754 KKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 813
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E + AA LFELEP+ NYI+LSN++A+ GMWDDV+ VR L+ G+KK PG
Sbjct: 814 MHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGC 873
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +H F + D +HP EI L DL +L + GY PN VL++VSD EK+
Sbjct: 874 SWVEVN-GQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQE 932
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LALAF LL+TS T+RI KNLRIC DCH FM S++ +E+VVRD FH
Sbjct: 933 LLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFH 992
Query: 536 HFQDGKCSCGNYW 548
HF++G CSC N+W
Sbjct: 993 HFKNGSCSCQNFW 1005
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 34/302 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ WTALI G++ +G+ +++L+C MRREG+ FT + KAC+ LD
Sbjct: 185 VFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLD 244
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HA+ I +G F SDL+VG+ ++ +Y KCG
Sbjct: 245 LEFGKQVHAEAIKVGDF-SDLFVGSALVDLYAKCG------------------------- 278
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+M A +F +P ++ V+W A++ G+ Q + + F RM + + T
Sbjct: 279 ------EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFT 332
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ CA G ++ V +A G + + L+DMYSKCG DA ++FV
Sbjct: 333 LSTVLKGCANSGNLRAGQIVHSLA--IRIGCELDEFISCCLVDMYSKCGLAGDALKVFVR 390
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
++ +V S+S++I G++ A ++F M + PN T +++A + +G YG
Sbjct: 391 IEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYG 450
Query: 308 VS 309
S
Sbjct: 451 ES 452
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 34/294 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + +N W AL+ G+ G + ++L+C M I FTLS + K C +
Sbjct: 286 VFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGN 345
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQ +H+ I +G D ++ ++ MY KCG G + KVF + + DVVS
Sbjct: 346 LRAGQIVHSLAIRIGC-ELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS------ 398
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
W+A++T Q + REA E F+RM+++GV + T
Sbjct: 399 -------------------------WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L ++SA LG + Y + GF N V +AL+ MY K GS+ D R+F
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC--NALVTMYMKIGSVQDGCRVFEA 491
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R++ S+++++ GF + +++F M+ PN TFI +L +CS +
Sbjct: 492 TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSL 545
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 46/307 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S + + C D++ G+ IH Q ++ G D ++ N+++ +Y KCG + KVF E+P
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQ-VIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
ERDVVSWT A++TG+V A+ F
Sbjct: 191 ERDVVSWT-------------------------------ALITGFVAEGYGSGAVNLFCE 219
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ GVE + T + AC+ +++ V AE G +++ VGSAL+D+Y+KC
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQV--HAEAIKVGDFSDLFVGSALVDLYAKC 277
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A R+F+ M ++N S+++++ GFA G A + LF M +E + T VL
Sbjct: 278 GEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVL 337
Query: 296 TACSHVGLKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C++ G G + D + C+VD+ + G +ALK+ ++ +P+
Sbjct: 338 KGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDV 396
Query: 345 GVWGALL 351
W A++
Sbjct: 397 VSWSAII 403
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 332/558 (59%), Gaps = 24/558 (4%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVLD 67
FE + ++ W ++I G G +++ + S+ ++ + P F+L++ AC +
Sbjct: 196 FELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEK 255
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTEL 125
+S G+QIH I+ F + VGN +I MY K G + +R++ ++ + + DV+++T L
Sbjct: 256 LSFGKQIHGY-IVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y GD+ A +FN L D VAWTAM+ GYVQN +AIE F+ M G +
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNS 374
Query: 186 VTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TL ++SA + + + + + I G P VG+AL MY+K GSI+ A +
Sbjct: 375 FTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSP----SVGNALTTMYAKAGSINGARK 430
Query: 244 IFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F ++Q R+ S++SMI+ A HG AI+LF M+ KP+ +T++GVL+AC+H G
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGG 490
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + + P+ HYACMVDL GRAG L+EA K VE MP+EP+ WG+L
Sbjct: 491 LVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSL 550
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L +C++++N ++A++AA L +EP+ G Y L+N+Y+S G WDD +++R+L+K G+K
Sbjct: 551 LSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G SW++ + H F D HP EI + + + ++ G+ P+ SVL+D+
Sbjct: 611 KEQGLSWVQ-IQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEV 669
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K +IL HSEKLA+AFG+++T T+RIMKNLR+C DCH + S+++ REI+VRD
Sbjct: 670 EVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRD 729
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 730 ATRFHHFKDGSCSCKDYW 747
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 199/430 (46%), Gaps = 60/430 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + ++ WT +I GY G +D+I ++ M ++ + P FTL+ + +C
Sbjct: 63 VFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGS 122
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G+++H+ + LG + + V N+++ MY K G L ++ VFD M R+ SW +I
Sbjct: 123 RGIGKKVHSFVVKLG-LHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER-MQYAGVETDYV 186
+ N G ++ A F L +D V+W +M+ G Q+ EA+++F ++ ++ D
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241
Query: 187 TLVGVISACAQLGVIKYANWV----------------------------CEIA----EGS 214
+L +SACA L + + + EIA E S
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G + +V+ +AL++ Y K G I A +IF +K +V ++++MI+G+ +G + AI+
Sbjct: 302 GISDL-DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-------------VSPSTDHYACMVDL 321
+F MV +PN T +L+A S V +G +SPS + + +
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTM 418
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEP 375
+AG + A K+ + + W +++ A H E A LFE ++P
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGE----EAIELFEQMLTLGIKP 474
Query: 376 DKIGNYIILS 385
D I +LS
Sbjct: 475 DHITYVGVLS 484
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 41/296 (13%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G T +Y+ N ++ +Y K GF + +F+EMP + SW ++ YA G +E A +F
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVF 64
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG--- 199
+ +P++D V+WT ++ GY Q + +AI+ F M V TL V+++CA G
Sbjct: 65 DLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRG 124
Query: 200 --------VIKY--------ANWVCEIAEGSGFGPINNVVVG----------SALIDMYS 233
V+K AN + + +G + VV +A+I ++
Sbjct: 125 IGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHM 184
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFI 292
CG +D A F + +R++ S++SMI G HG + A+Q F ++K T KP+ +
Sbjct: 185 NCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLA 244
Query: 293 GVLTACSHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEK 337
L+AC+++ G + +G T A ++ + ++G +E A +++E+
Sbjct: 245 SALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 131/258 (50%), Gaps = 37/258 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F +K + WTA+I GY+ G D+I ++ +M EG P SFTL+A+ A + V
Sbjct: 328 RQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSV 387
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTE 124
++ G+QIHA I G S VGN + MY K G + +RKVF+ + + RD VSWT
Sbjct: 388 TSLNHGKQIHASAIRSGEALSP-SVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTS 446
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I+A A +G E EAIE FE+M G++ D
Sbjct: 447 MIMALAQHGLGE-------------------------------EAIELFEQMLTLGIKPD 475
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA-LIDMYSKCGSIDDAYR 243
++T VGV+SAC G+++ ++ + I+ + A ++D++ + G + +AY+
Sbjct: 476 HITYVGVLSACTHGGLVEQGRSYFDLMK--NVHKIDPTLSHYACMVDLFGRAGLLQEAYK 533
Query: 244 IFVGMK-QRNVFSYSSMI 260
M + +V ++ S++
Sbjct: 534 FVENMPMEPDVIAWGSLL 551
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P+ + ++ Y+K G ++ A+++F + R+ S++++I+G+ GR AI++F
Sbjct: 37 PVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFV 96
Query: 278 DMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYAC------MVDLLGRAG 326
DMVK + P T VL +C+ +G K + +AC ++++ + G
Sbjct: 97 DMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTG 156
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
L+ A + ++M + N W A++ +H N
Sbjct: 157 DLKMAKVVFDRMKLR-NTSSWNAMIS---LHMN 185
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/571 (41%), Positives = 344/571 (60%), Gaps = 34/571 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKD--SISLYCSM-RREGIGPVSFTLSALFKACTE 64
+F Q+ +N F W +IRG+ K +I+L+C M E I P FT ++ KAC +
Sbjct: 74 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAK 133
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERD----- 118
+ G+QIH L GF D +V + ++ MYV CG + + +F + ER+
Sbjct: 134 TGKIQQGKQIHGLA-LKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMI 192
Query: 119 --------VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
VV W +I Y GD ++A LF+++ + V+W M++GY QN ++A+
Sbjct: 193 DRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAV 252
Query: 171 EYFERMQYA-GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
E F M+ + +YVTLV V+ A ++LG ++ W+ AE SG I++V+ GSALI
Sbjct: 253 EVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIR-IDDVL-GSALI 310
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
DMYSKCG I+ A +F + + NV ++S+MI GFA+HG+A AI F M + +P+ V
Sbjct: 311 DMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 370
Query: 290 TFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
+I +LTACSH GL G+ P +HY CMVDLLGR G L+EA + +
Sbjct: 371 AYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILN 430
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDV 397
MP++P+ +W ALLGAC++HRN E+ + AN L ++ P G Y+ LSN+YAS G W +V
Sbjct: 431 MPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 490
Query: 398 SRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY 457
S +R +K ++K+PG SW++ D GV+HEF D +HP + EI L ++ D+L+ GY
Sbjct: 491 SEMRLRMKEMDIRKDPGCSWIDID-GVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGY 549
Query: 458 QPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG 517
+P VL ++ +E+K+ L HSEK+A AFGL++TSPG +RI+KNLRICEDCH +
Sbjct: 550 RPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 609
Query: 518 ASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+V R+I VRD RFHHFQDG CSC +YW
Sbjct: 610 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 49/348 (14%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--- 103
G P S +L C + D+S QIHA + G D ++
Sbjct: 12 GNSPAS-SLFPQINTCRTIRDLS---QIHA-VFIKSGQIRDTLAAAEILRFCATSDLHHR 66
Query: 104 -LGCSRKVFDEMPERDVVSWTELIVAYANNGDMES--AGGLF-----NELPLKDKVAWTA 155
L + K+F++MP+R+ SW +I ++ + + ++ A LF +E ++ + +
Sbjct: 67 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126
Query: 156 MV-----TGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG---VIKYANWV 207
++ TG +Q K + + + G E LV + C + V+ Y N
Sbjct: 127 VLKACAKTGKIQQGKQIHGLAL--KYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKN-- 182
Query: 208 CEIAEGSGFGPIN------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
I E I+ VV+ + +ID Y + G A +F M+QR+V S+++MI
Sbjct: 183 --IIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 240
Query: 262 GFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG-------LKCY----GVS 309
G++ +G A+++F +M K E +PN VT + VL A S +G L Y G+
Sbjct: 241 GYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIR 300
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ ++D+ + G +E+A+ + E++P E N W A++ IH
Sbjct: 301 IDDVLGSALIDMYSKCGIIEKAIMVFERLPRE-NVITWSAMINGFAIH 347
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 33/198 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTE 64
R++F++++ ++ W +I GY G KD++ ++ M++ E I P TL ++ A +
Sbjct: 221 RMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSR 280
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + LG+ +H G D +G+ +I MY KCG + + VF+ +P +V++W
Sbjct: 281 LGSLELGEWLHLYA-EDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITW-- 337
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+AM+ G+ + + +AI+ F +M+ AGV
Sbjct: 338 -----------------------------SAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 368
Query: 185 YVTLVGVISACAQLGVIK 202
V + +++AC+ G+++
Sbjct: 369 DVAYINLLTACSHAGLVE 386
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VFE++ +N W+A+I G+ + G D+I +C MR+ G+ P L AC+
Sbjct: 324 MVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAG 383
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTEL 125
V G++ +Q + + G + M+ + + G L + + MP + D V W L
Sbjct: 384 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKAL 443
Query: 126 IVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A + ++E + N ++ D A+ A+ Y E E RM+ +
Sbjct: 444 LGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIR 503
Query: 183 TD 184
D
Sbjct: 504 KD 505
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 326/555 (58%), Gaps = 20/555 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE+V K +W A+I GY+ G D+ L+ M E + FT +++ AC
Sbjct: 252 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 311
Query: 66 LDVSLGQQIHAQTILL-GGFTSD--LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
G+ +H Q I L F + L V N ++ +Y K G + ++++FD M +DVVSW
Sbjct: 312 GFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSW 371
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y ++G ++ A +F +P K+ ++W MV+GYV +A++ F +M+ V+
Sbjct: 372 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 431
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T G I+AC +LG +K+ + GF N+ G+AL+ MY+KCG+++DA
Sbjct: 432 PCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA--GNALLTMYAKCGAVNDAR 489
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F+ M + S+++MI HG A++LF MV P+ ++F+ +LTAC+H G
Sbjct: 490 LVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAG 549
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G+SP DHYA ++DLLGR+G + EA +++ MP EP +W A+
Sbjct: 550 LVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAI 609
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ + + E AA+ LF + P G YI+LSN Y++AG W D +RVR+L++ G+K
Sbjct: 610 LSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 669
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG SW+E G + IH F GD HP + E+ Q L + R++ GY P+ + VL+D+
Sbjct: 670 KEPGCSWIEVGSK--IHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDME 727
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EK+ IL HSEKLA+ FGLL PGATV ++KNLRIC DCH M S+ +GREIVVR
Sbjct: 728 PHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVR 787
Query: 530 DNMRFHHFQDGKCSC 544
D RFHHF+DG+CSC
Sbjct: 788 DVRRFHHFKDGECSC 802
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 191/424 (45%), Gaps = 56/424 (13%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQ- 72
++ L A++ + ++S++ ++ G + P ++ +AL A ++ +++
Sbjct: 123 RDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC 182
Query: 73 -QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS---RKVFDEMPERDVVSWTELIVA 128
Q+H ++L G + L V N +I +Y+KC S RKV DEMP++D ++WT ++V
Sbjct: 183 TQLHC-SVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG 241
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y GD+ +A +F E+ K V W AM++GYVQ+ +A E F RM V D T
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301
Query: 189 VGVISACAQLGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+SACA G + V I F P + V +AL+ +YSK G I A RIF
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361
Query: 247 GMKQRNVFSYSS-------------------------------MILGFAMHGRAHAAIQL 275
M ++V S+++ M+ G+ G + A++L
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLG 323
F M + KP T+ G + AC +G ++C G S ++ +
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC-GFEASNSAGNALLTMYA 480
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIGNY 381
+ G + +A + MP + W A++ A H E ++ + E ++PD+I
Sbjct: 481 KCGAVNDARLVFLVMP-NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 539
Query: 382 IILS 385
IL+
Sbjct: 540 TILT 543
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 328/554 (59%), Gaps = 19/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++N W +I GY G ++++ L + R G+ P +L+++F AC+ ++
Sbjct: 375 LFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVA 434
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G Q+H+ + +G F S + N +I MY KC + +R+VF M +D+VSW +
Sbjct: 435 LETGTQVHSLAVKVGCQFNS--FACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFL 492
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A N ++ A F+ + +D V+WT +++ Y + EA+ F+ M +
Sbjct: 493 AALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L ++ C LG K + +A G + ++V +ALI MY KCG D + RIF
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMD--SELIVANALISMYFKCGCAD-SRRIFD 609
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M++R++F+++++I G+A HG AI+++ M PN VTF+G+L ACSH GL
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG++P +HYACMVDLLGR G ++ A + + MP+EP+ +W ALLGAC
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGAC 729
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N EI + AA LF +EP GNY++LSNIY+S GMW +V+ VR+++K G+ K PG
Sbjct: 730 KIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPG 789
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW + + +H F GD H EI L +L L+A GY P+ VL+D+ +E+K+
Sbjct: 790 CSWTQ-IKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKE 848
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L+ HSEKLA+A+ LL T G ++I+KNLRIC DCH F+ S V R+I +RD RF
Sbjct: 849 SSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRF 908
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC ++W
Sbjct: 909 HHFRNGSCSCEDFW 922
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 169/362 (46%), Gaps = 19/362 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I Y G + LY ++ + + LS +
Sbjct: 54 REVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR----- 108
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ + A+ + G + N MI YV+ G + +R++FD MP RDV SW +
Sbjct: 109 ----LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y ++ M A LF ++P ++ V+WT M++GY + +A + F +M G+ D
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI-DDAYRI 244
+SA LG + + +A +GF +VV+G+A++++YS+ S+ D A +
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVLALKTGFE--RDVVIGTAILNVYSRDTSVLDTAIKF 282
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG-DMVKTETKPNGVTFIGVLTACSHVG- 302
F M +RN +++S+MI + GR AAI ++ D VK+ + I L C +
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTAL--ITGLAQCGRIDD 340
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
L P + ++ + G + EA ++ +KMP G + G Q R+
Sbjct: 341 ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRS 400
Query: 360 PE 361
E
Sbjct: 401 EE 402
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 152/358 (42%), Gaps = 70/358 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY-ILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT- 63
R +FE++ +N WT +I GY ++ H K + ++C M REG+ P ++ A
Sbjct: 178 RNLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 64 ----------EVLDVSLG--QQIHAQTILLGGFTSDLYVGNTMIGMY------------- 98
VL + G + + T +L ++ D V +T I +
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 99 ------------------------------------VKCGFLGCSRKVFDEMPERDVVSW 122
+CG + +R +F+++PE VVSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LI Y NG + A LF+++P ++ ++W M+ GY QN + EA+ + + +G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+L + AC+ + ++ V +A G N +ALI MY KC +++ A
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLA--VKVGCQFNSFACNALITMYGKCRNMEYAR 474
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F M +++ S++S + + A F +M+ + V++ +++A +H
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD----VSWTTIISAYAH 528
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+ + ++ WT +I Y +++ + +M E P S L+ L C +
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+GQQIH I L G S+L V N +I MY KCG SR++FD M ERD+ +W +
Sbjct: 565 GASKIGQQIHTVAIKL-GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTI 622
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G REAI+ ++ M+ AGV +
Sbjct: 623 ITGYAQHG-------------------------------LGREAIKMYQHMESAGVLPNE 651
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT VG+++AC+ G++ + +++ G P+ + ++D+ + G + A +
Sbjct: 652 VTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY--ACMVDLLGRTGDVQGAEQF 709
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGRAH----AAIQLF 276
M + + +S+++ +H A AA +LF
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLF 746
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 23/266 (8%)
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
+ G +G +R+VFD MP RD+++W +I AY +NG ++A L++ + + +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
Y + + EA F+ M +E + V +IS Q G I A + +
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N+++ G Y + DA +F M +RN+ S++ MI G+ A +F M
Sbjct: 162 NSMLTG------YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 280 VKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHY----ACMVDLLGR-AGC 327
+ P+ F L+A +G L+ + + ++++ R
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
L+ A+K E M +E N W ++ A
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAA 300
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 328/554 (59%), Gaps = 19/554 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++N W +I GY G ++++ L + R G+ P +L+++F AC+ ++
Sbjct: 375 LFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVA 434
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G Q+H+ + +G F S + N +I MY KC + +R+VF M +D+VSW +
Sbjct: 435 LETGTQVHSLAVKVGCQFNS--FACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFL 492
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A N ++ A F+ + +D V+WT +++ Y + EA+ F+ M +
Sbjct: 493 AALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L ++ C LG K + +A G + ++V +ALI MY KCG D + RIF
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMD--SELIVANALISMYFKCGCAD-SRRIFD 609
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M++R++F+++++I G+A HG AI+++ M PN VTF+G+L ACSH GL
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG++P +HYACMVDLLGR G ++ A + + MP+EP+ +W ALLGAC
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGAC 729
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N EI + AA LF +EP GNY++LSNIY+S GMW +V+ VR+++K G+ K PG
Sbjct: 730 KIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPG 789
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW + + +H F GD H EI L +L L+A GY P+ VL+D+ +E+K+
Sbjct: 790 CSWTQ-IKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKE 848
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L+ HSEKLA+A+ LL T G ++I+KNLRIC DCH F+ S V R+I +RD RF
Sbjct: 849 SSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRF 908
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC ++W
Sbjct: 909 HHFRNGSCSCEDFW 922
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 169/362 (46%), Gaps = 19/362 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I Y G + LY ++ + + LS +
Sbjct: 54 REVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR----- 108
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ + A+ + G + N MI YV+ G + +R++FD MP RDV SW +
Sbjct: 109 ----LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y ++ M A LF ++P ++ V+WT M++GY + +A + F +M G+ D
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI-DDAYRI 244
+SA LG + + +A +GF +VV+G+A++++YS+ S+ D A +
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVLALKTGFE--RDVVIGTAILNVYSRDTSVLDTAIKF 282
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG-DMVKTETKPNGVTFIGVLTACSHVG- 302
F M +RN +++S+MI + GR AAI ++ D VK+ + I L C +
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTAL--ITGLAQCGRIDD 340
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
L P + ++ + G + EA ++ +KMP G + G Q R+
Sbjct: 341 ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRS 400
Query: 360 PE 361
E
Sbjct: 401 EE 402
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 152/358 (42%), Gaps = 70/358 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY-ILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT- 63
R +FE++ +N WT +I GY ++ H K + ++C M REG+ P ++ A
Sbjct: 178 RNLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 64 ----------EVLDVSLG--QQIHAQTILLGGFTSDLYVGNTMIGMY------------- 98
VL + G + + T +L ++ D V +T I +
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 99 ------------------------------------VKCGFLGCSRKVFDEMPERDVVSW 122
+CG + +R +F+++PE VVSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LI Y NG + A LF+++P ++ ++W M+ GY QN + EA+ + + +G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+L + AC+ + ++ V +A G N +ALI MY KC +++ A
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLA--VKVGCQFNSFACNALITMYGKCRNMEYAR 474
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F M +++ S++S + + A F +M+ + V++ +++A +H
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD----VSWTTIISAYAH 528
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+ + ++ WT +I Y +++ + +M E P S L+ L C +
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+GQQIH I L G S+L V N +I MY KCG SR++FD M ERD+ +W +
Sbjct: 565 GASKIGQQIHTVAIKL-GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTI 622
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G REAI+ ++ M+ AGV +
Sbjct: 623 ITGYAQHG-------------------------------LGREAIKMYQHMESAGVLPNE 651
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT VG+++AC+ G++ + +++ G P+ + ++D+ + G + A +
Sbjct: 652 VTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY--ACMVDLLGRTGDVQGAEQF 709
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGRAH----AAIQLF 276
M + + +S+++ +H A AA +LF
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLF 746
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 23/266 (8%)
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
+ G +G +R+VFD MP RD+++W +I AY +NG ++A L++ + + +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
Y + + EA F+ M +E + V +IS Q G I A + +
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N+++ G Y + DA +F M +RN+ S++ MI G+ A +F M
Sbjct: 162 NSMLTG------YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 280 VKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHY----ACMVDLLGR-AGC 327
+ P+ F L+A +G L+ + + ++++ R
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
L+ A+K E M +E N W ++ A
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAA 300
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 316/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F+ V+ +W A+I Y+ G+ + + ++ M G+ TL ++ AC +
Sbjct: 174 QLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRI 233
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D LG+ + A+ + G + + +I MY KCG LG +R+
Sbjct: 234 GDAKLGKWV-AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARR---------------- 276
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
LF+ + +D VAW+AM++GY Q + REA+ F MQ A VE +
Sbjct: 277 ---------------LFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPND 321
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+V V+SACA LG ++ WV +++G+AL+D Y+KCG IDDA F
Sbjct: 322 VTMVSVLSACAVLGALETGKWVHSYIRRKRLS--LTIILGTALVDFYAKCGCIDDAVEAF 379
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +N ++++++I G A +GR A++LF M K +P VTFIGVL ACSH L
Sbjct: 380 ESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVE 439
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ P +HY C+VDLLGRAG ++EA + + MP+EPN +W ALL +
Sbjct: 440 EGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSS 499
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N EI + A + L P G+YI+LSNIYAS G W + + +R+ +K G++K P
Sbjct: 500 CAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTP 559
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D GV+ EF A D HP EI Q + +++DR++ GY PN V +V + EK
Sbjct: 560 GCSLIELD-GVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+AFGL+ PGAT+R+ KNLR+C DCH S+V REIVVRD R
Sbjct: 619 EVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNR 678
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 679 FHHFKDGTCSCNDYW 693
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 47/344 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+ L+R + GH +D++ L+ M + P T++ K+C+ + + +G+ I A
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
+ G +D +V +++I MY C + ++ +FD + E V
Sbjct: 146 VK-RGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGV------------------- 185
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
V W A++T Y++N E +E F+ M GV D +TLV V++AC ++
Sbjct: 186 ------------VMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRI 233
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G K WV E + G + N + +ALIDMY+KCG + A R+F GM+ R+V ++S+
Sbjct: 234 GDAKLGKWVAEYVDEKGL--VRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSA 291
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYG 307
MI G+ + A+ LF +M E +PN VT + VL+AC+ +G ++
Sbjct: 292 MISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKR 351
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+S + +VD + GC+++A++ E MPV+ N W AL+
Sbjct: 352 LSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 394
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 333/555 (60%), Gaps = 22/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q + FL+TA I + G + LY + I P FT S++ K+C+
Sbjct: 84 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCS---- 139
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ IH +L G D YV ++ +Y K G + ++KVFD MPER +VS T +I
Sbjct: 140 TKSGKLIHTH-VLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 198
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYV 186
YA G++E+A LF+ + +D V+W M+ GY Q+ P +A+ F+++ G + D +
Sbjct: 199 CYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEI 258
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +SAC+Q+G ++ W+ S NV V +ALIDMYSKCGS+++A +F
Sbjct: 259 TVVAALSACSQIGALETGRWIHVFVNSSRIRL--NVKVCTALIDMYSKCGSLEEAVLVFN 316
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGL-- 303
++++ ++++MI G+AMHG + A++LF +M T +P +TFIG L AC+H GL
Sbjct: 317 DTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVN 376
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ P +HY C+V LLGRAG L+ A ++++ M +E + +W ++LG+
Sbjct: 377 EGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGS 436
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H + + A +L G Y++LSNIYA G ++ V++VR L+K G+ K P
Sbjct: 437 CKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEP 496
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D V HEFRAGD H S EI L + +R+++ GY PN +VL+D+ + EK
Sbjct: 497 GISTIEIDNKV-HEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEK 555
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+R L HSE+LA+A+GL++T PG+ ++I KNLR+C DCH S++ GR+IV+RD R
Sbjct: 556 ERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNR 615
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSC ++W
Sbjct: 616 FHHFSDGSCSCDDFW 630
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 36/265 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R +F+++ ++ W +I GY G D++ L+ + +G P T+ A AC++
Sbjct: 210 RALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQ 269
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + G+ IH + ++ V +I MY KCG L + VF++ P +D+V+W
Sbjct: 270 IGALETGRWIHV-FVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 328
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVET 183
+I YA + GY Q +A+ F+ MQ G++
Sbjct: 329 MITGYA--------------------------MHGYSQ-----DALRLFDEMQGITGLQP 357
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T +G + ACA G++ + E + G +G + L+ + + G + AY
Sbjct: 358 TDITFIGTLQACAHAGLVNEGIQIFE-SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 416
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHG 267
I M + + +SS++ +HG
Sbjct: 417 IIKNMNMEADSVLWSSVLGSCKLHG 441
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 38/267 (14%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA++G + + LF++ D +TA + N +A + ++ + + + T
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 188 LVGVISACAQ--------------LGVIKY-ANWVCEIAEGSG----------FGPINNV 222
++ +C+ LG+ Y A + +I G P ++
Sbjct: 131 FSSILKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSL 190
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V +A+I Y+K G+++ A +F M +R++ S++ MI G++ HG A+ LF ++
Sbjct: 191 VSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLAD 250
Query: 283 -ETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEE 330
+ KP+ +T + L+ACS HV + + + ++D+ + G LEE
Sbjct: 251 GKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEE 310
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIH 357
A+ + P + W A++ +H
Sbjct: 311 AVLVFNDTP-RKDIVAWNAMITGYAMH 336
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 341/598 (57%), Gaps = 57/598 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ VF+ + + + F+W +I+GY H ++ +S+Y M I P FT K
Sbjct: 58 NYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGF 117
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T + + G+++ + GF S+L+V I M+ CG + + KVFD +VV+W
Sbjct: 118 TRDMALQHGKELLNHAVK-HGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTW 176
Query: 123 TELIVAY-------------------------------------------ANNGDMESAG 139
++ Y A G+M+ A
Sbjct: 177 NIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQ 236
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
G+F+ + +D V+WTAM+ GY++ A+ F MQ + V+ D T+V ++ ACA LG
Sbjct: 237 GVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLG 296
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ WV + + N+ VG+AL+DMY KCG++ A ++F M Q++ F++++M
Sbjct: 297 ALELGEWVKTCIDKNSNK--NDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTM 354
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC---------SHVGLKCYGVSP 310
I+G A++G A+ +F +M++ P+ +T+IGVL AC +++ ++ +G+ P
Sbjct: 355 IVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCACMVDKGKSFFTNMTMQ-HGIKP 413
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
+ HY CMVDLLG GCLEEAL+++ MPV+PN VWG+ LGAC++H+N ++A +AA +
Sbjct: 414 TVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQI 473
Query: 371 FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA 430
ELEP+ Y++L NIYA++ W+++ +VR+L+ G+KK PG S +E + G ++EF A
Sbjct: 474 LELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELN-GNVYEFVA 532
Query: 431 GDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGL 490
GD +HP S EI L +++ L GY P+ V D+ +E+K+ L HSEKLA+A+ L
Sbjct: 533 GDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYAL 592
Query: 491 LTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+++ PG T+RI+KNLR+C DCH SQ RE++V+D RFHHF+ G CSC N+W
Sbjct: 593 ISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+G+M A +F+ +P W M+ GY + + P + + M + ++ D T
Sbjct: 54 SGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFS 113
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ + +++ + A GF +N+ V A I M+S CG +D A+++F
Sbjct: 114 LKGFTRDMALQHGKELLNHAVKHGFD--SNLFVQKAFIHMFSLCGIVDLAHKVFDMGDAC 171
Query: 252 NVFSYSSMILGF 263
V +++ M+ G+
Sbjct: 172 EVVTWNIMLSGY 183
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 320/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + K+ + +I GY G +D++ + M + P +FTLS++ +E
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+DV G++IH ++ G SD+Y+G++++ MY K
Sbjct: 220 VDVLKGKEIHGY-VIRKGIDSDVYIGSSLVDMYAK------------------------- 253
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +E + +F+ L +D ++W ++V GYVQN + EA+ F +M A V
Sbjct: 254 ------SARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGA 307
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V VI ACA L + + GFG N+ + SAL+DMYSKCG+I A +IF
Sbjct: 308 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--RNIFIASALVDMYSKCGNIQAARKIF 365
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M + S++++I+G A+HG H A+ LF +M + KPN V F+ VLTACSHVGL
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YG++ +HYA + DLLGRAG LEEA + KM VEP G VW LL +
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N E+A+ A +F ++ + +G Y+++ N+YAS G W +++++R ++ GL+K P
Sbjct: 486 CSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKP 545
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + H F +GD +HP+ I + L ++++++ +GY + VL+DV +E K
Sbjct: 546 ACSWIEM-KNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 604
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSE+LA+AFG++ T PG T+R+ KN+RIC DCH+ + S++ REI+VRDN R
Sbjct: 605 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 664
Query: 534 FHHFQDGKCSCGNYW 548
FHHF G CSCG+YW
Sbjct: 665 FHHFNRGSCSCGDYW 679
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 173/366 (47%), Gaps = 54/366 (14%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LVF+ ++ W ++IR + Q +++ + MR G P ++ K+CT ++
Sbjct: 60 LVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ G+ +H + LG DLY GN ++ MY K + RKVF+ MP +DVVS+ +I
Sbjct: 120 DLRFGESVHGFIVRLG-MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVI 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA +G E A + E+ D KP D
Sbjct: 179 AGYAQSGMYEDALRMVREMGTSD--------------LKP-----------------DAF 207
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAY 242
TL V+ ++ Y + V + E G+ G ++V +GS+L+DMY+K I+D+
Sbjct: 208 TLSSVLPIFSE-----YVD-VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 261
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F + +R+ S++S++ G+ +GR + A++LF MV + +P V F V+ AC+H+
Sbjct: 262 RVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLA 321
Query: 303 -------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L Y G + + +VD+ + G ++ A K+ ++M + W A++
Sbjct: 322 TLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS-WTAII 380
Query: 352 GACQIH 357
+H
Sbjct: 381 MGHALH 386
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I Y N + A +F L +AW +++ + + A+ F M+ +G D
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDD 240
+ V+ +C + +++ V GF G ++ G+AL++MYSK ID
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESV------HGFIVRLGMDCDLYTGNALMNMYSKLLGIDS 158
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
++F M +++V SY+++I G+A G A+++ +M ++ KP+ T VL
Sbjct: 159 VRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVL 213
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/598 (36%), Positives = 341/598 (57%), Gaps = 59/598 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKA 61
S R F+Q+ K+ + W ++I Y+ GH ++I Y + I P +T + KA
Sbjct: 68 SLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA 127
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++D G++IH LG F +++V ++I MY + GF G +R +FD+MP RD+ S
Sbjct: 128 CGTLVD---GRKIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 183
Query: 122 WTELIVAYANNGD---------------------------------------MESAGGLF 142
W +I NG+ ++SA +F
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVF 243
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVGVISACAQLGVI 201
+P+KD ++W ++TGY QN EAIE ++ M+ + + T V ++ A A +G +
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303
Query: 202 KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
+ + + +V V + LID+Y KCG + DA +F + Q + +++++I
Sbjct: 304 QQGMKIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSP 310
+HG A ++LFG+M+ KP+ VTF+ +L+ACSH G ++ YG+ P
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 421
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
S HY CMVDLLGRAG LE A ++ MP++P+ +WGALLGAC+IH N E+ + A++ L
Sbjct: 422 SLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRL 481
Query: 371 FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA 430
FE++ +G Y++LSNIYA+ G W+ V +VR L + GLKK PG+S +E +R V F
Sbjct: 482 FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV-DVFYT 540
Query: 431 GDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGL 490
G+ +HP EI + L L ++++ GY P+ VL DV ++EK+ IL +HSE+LA+AFG+
Sbjct: 541 GNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGI 600
Query: 491 LTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++T P + +RI KNLR+C DCH S++ REIVVRD+ RFHHF+DG CSCG+YW
Sbjct: 601 ISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 181/402 (45%), Gaps = 55/402 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
LF + T+ + +HA ++ G S +++ ++ +Y G + SR FD++P++
Sbjct: 25 LFDSSTKT---PFAKCLHALLVVAGKVQS-IFISTRLVNLYANLGDVSLSRCTFDQIPQK 80
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKD-----------------------KVAWT 154
DV +W +I AY +NG A G F +L L K+
Sbjct: 81 DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCW 140
Query: 155 AMVTGYVQNA-KPREAIEYFERMQYAGVE---------TDYVTLVGVISACAQLGVIKYA 204
A G+ N I + R + G+ D + +IS Q G A
Sbjct: 141 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 200
Query: 205 NWVCEIA--EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
V + EG + V + +DMY+K G +D A+++F + ++V S++++I G
Sbjct: 201 LDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITG 260
Query: 263 FAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY- 315
+A +G A AI+++ M + E PN T++ +L A +HV G+K +G T+ +
Sbjct: 261 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 320
Query: 316 -----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
C++D+ G+ G L +A+ + ++P E + W A++ IH + E +
Sbjct: 321 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLKLFGEM 379
Query: 371 FE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
+ ++PD + ++ L + + +G ++ RL++ G+K
Sbjct: 380 LDEGVKPDHV-TFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 420
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 323/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+ + K W +++ GY+ G + +I+++ M EGI P T+ AC ++
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ +H L SD+ V N++I MY KC ++V
Sbjct: 363 GDLERGKFVHKFVDQLN-LGSDISVMNSLISMYSKC------KRV--------------- 400
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A +FN L + V+W AM+ GY QN + EA+ F M+ G++ D
Sbjct: 401 ----------DIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V VI A A+L V ++A W+ + S N+ V +AL+DMYSKCG+I A ++F
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLD--KNIFVTTALVDMYSKCGAIHMARKLF 508
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ R+V ++++MI G+ HG AA+ LF M K +PN +T++ V++ACSH GL
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ PS DHY MVDLLGRAG ++EA +E MP+ P V+GA GA
Sbjct: 569 EGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGA 628
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH+N E+ + AA LFEL PD+ G +++L+NIYAS W V+ VR+ ++ GLKK P
Sbjct: 629 CKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTP 688
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E R +H F +G THP S I L +L+ ++A GY P+ +L DV D+ +
Sbjct: 689 GCSVVEL-RNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQ 746
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L +HSEKLA+AFGLL TSPG T+ + KNLR+C DCH S V GREI+VRD R
Sbjct: 747 EQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQR 806
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 807 FHHFKNGICSCGDYW 821
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K L+ +++GY L+ +++ C MR + + PV + + L K C + D
Sbjct: 103 VFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD 162
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH Q ++ F ++++ ++ MY KC R++ D
Sbjct: 163 LKRGKEIHGQ-LITNSFAANVFAMTGVVNMYAKC------RQIDD--------------- 200
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +F+ +P +D V+W ++ G+ QN ++A+E RMQ G D +T
Sbjct: 201 ----------AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV V+ A A +G++ + A +GF + N+ +AL DMYSKCGS++ A IF G
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI--STALADMYSKCGSVETARLIFDG 308
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M Q+ V S++SM+ G+ +G AI +F M++ P GVT + L AC+ +G
Sbjct: 309 MDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ W +I G+ G K ++ L M+ EG P S TL + A +V
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH I GF + + + MY KCG
Sbjct: 264 LMVGKSIHGYAIR-AGFAKLVNISTALADMYSKCG------------------------- 297
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E+A +F+ + K V+W +M+ GYVQN +P +AI FE+M G++ VT
Sbjct: 298 ------SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ + ACA LG ++ +V + + G +++ V ++LI MYSKC +D A IF
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLG--SDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ R S+++MILG+A +GR A+ F +M KP+ T + V+ A + + + +
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 308 -------VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ D +VD+ + G + A K+ + M + + W A++
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGT 528
Query: 357 H 357
H
Sbjct: 529 H 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 19/286 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ ++ G + A +F + K + M+ GY +N+ A+ + RM+Y V+
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ C +K + + F NV + +++MY+KC IDDAY
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA--NVFAMTGVVNMYAKCRQIDDAY 202
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +R++ S++++I GF+ +G A A++L M +P+ +T + VL A + VG
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 303 LKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L G S YA + D+ + G +E A + + M + W +
Sbjct: 263 LLMVG--KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD-QKTVVSWNS 319
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
++ + PE A + E D G I+ ++A A + D
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTG-VTIMEALHACADLGD 364
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N + + L+ ++SK GSI++A R+F + + Y +M+ G+A + A+
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRA 325
M + KP F +L C H L + + +V++ +
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKC 195
Query: 326 GCLEEALKMVEKMP 339
+++A KM ++MP
Sbjct: 196 RQIDDAYKMFDRMP 209
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 318/559 (56%), Gaps = 84/559 (15%)
Query: 4 FPRLVFEQVKYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
+ + +F+ V+ + P F+W + ++ D+I L+ +R+ + P +FT S++ +A
Sbjct: 111 YAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRA 170
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C +L DL G + G+ K GF
Sbjct: 171 CLNLL--------------------DLSNGRILHGVVEKVGFR----------------- 193
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+WT+M+ GYVQ K +EAI F +M+ AGV
Sbjct: 194 ------------------------------SWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 223
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + VT+V V++ACA LG + + E + GF NV + + LIDMY KCG +++A
Sbjct: 224 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK--RNVRISNTLIDMYVKCGCLEEA 281
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R V S+S+MI G AMHGRA A++LF DM + +PNGVTFIG+L ACSH+
Sbjct: 282 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 341
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY CMVDLL RAG L EA + + MP++PNG VWGA
Sbjct: 342 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 401
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC++H+N E+A+ A HL EL+P G Y++LSNIYA AG W+D +RVR+ +K +
Sbjct: 402 LLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQV 461
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG+S + D GV+HEF AG+ +HP++ +I Q +LL+ ++ GY PN VL D+
Sbjct: 462 KKTPGWSSITVD-GVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIE 520
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+ EK + + HSEKLAL FGL+ T +RIMKNLRICEDCH S ++ REIVVR
Sbjct: 521 EGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVR 580
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFH F D CSC +YW
Sbjct: 581 DRNRFHCFNDNSCSCRDYW 599
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 323/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + K+ + +I GY G +D++ + M + P SFTLS++ +E
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+DV G++IH ++ G SD+Y+G++++ MY K
Sbjct: 256 VDVIKGKEIHGY-VIRKGIDSDVYIGSSLVDMYAK------------------------- 289
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +E + +F+ L +D ++W ++V GYVQN + EA+ F +M A V+
Sbjct: 290 ------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V VI ACA L + + GFG +N+ + SAL+DMYSKCG+I A +IF
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIF 401
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M + S++++I+G A+HG H A+ LF +M + KPN V F+ VLTACSHVGL
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YG++ +HYA + DLLGRAG LEEA + KM VEP G VW LL +
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N E+A+ A +F ++ + +G Y+++ N+YAS G W +++++R ++ GL+K P
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + H F +GD +HP+ +I + L ++++++ +GY + VL+DV +E K
Sbjct: 582 ACSWIEM-KNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 640
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSE+LA+AFG++ T PG T+R+ KN+RIC DCH+ + S++ REI+VRDN R
Sbjct: 641 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 700
Query: 534 FHHFQDGKCSCGNYW 548
FHHF G CSCG+YW
Sbjct: 701 FHHFNRGNCSCGDYW 715
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 32/371 (8%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+ +K W ++IR + Q +++ + MR G P ++ K+CT ++D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK-----VFDEMPERDVVSWT 123
G+ +H + L G DLY GN ++ MY K LG K VFDEMP+R S
Sbjct: 122 RFGESVHGFIVRL-GMDCDLYTGNALMNMYAK--LLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 124 ELIVAYA--NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
E + A ++S +F +P KD V++ ++ GY Q+ +A+ M +
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGS 237
+ D TL V+ ++ Y + V + E G+ G ++V +GS+L+DMY+K
Sbjct: 239 KPDSFTLSSVLPIFSE-----YVD-VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 292
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+D+ R+F + R+ S++S++ G+ +GR + A++LF MV + KP V F V+ A
Sbjct: 293 IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Query: 298 CSHVG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
C+H+ L Y G + + +VD+ + G ++ A K+ ++M V
Sbjct: 353 CAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS- 411
Query: 347 WGALLGACQIH 357
W A++ +H
Sbjct: 412 WTAIIMGHALH 422
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I Y N + A LF L +AW +++ + + +A+ F M+ +G D
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 185 YVTLVGVISACAQLGVIKYANWV----------CEIAEGSGF--------GPINNVVVGS 226
+ V+ +C + +++ V C++ G+ G + + VG+
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 227 ALIDMYSKCGS----------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+M + + ID R+F M +++V SY+++I G+A G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGV----SPSTDHY--ACMV 319
A+++ +M T+ KP+ T VL S G + +G +D Y + +V
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
D+ ++ +E++ ++ ++ +G W +L+
Sbjct: 285 DMYAKSARIEDSERVFSRLYCR-DGISWNSLVA 316
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 335/556 (60%), Gaps = 28/556 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF ++ +N WT LI G++ G +S+ L+ MR E + F L+ L C
Sbjct: 346 KRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNT 405
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ LG Q+H+ L G T + V N++I MY KCG L + +F+ M ERD+VSWT +
Sbjct: 406 MDICLGSQLHS-LCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGM 464
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGVETD 184
I AY+ G++ A F+++ ++ + W AM+ Y+Q+ + ++ Y + + V D
Sbjct: 465 ITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPD 524
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+VT V + CA +G K + + I G I + V +A+I MYSKCG I +A +
Sbjct: 525 WVTYVTLFRGCADIGANKLGDQI--IGHTVKVGLILDTSVVNAVITMYSKCGRISEARKA 582
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++++ S+++MI G++ HG AI++F D++ KP+ ++++ VL+ CSH GL
Sbjct: 583 FDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLV 642
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + +SP +H++CMVDLLGRAG L EA ++++MP++P VWGALL
Sbjct: 643 EEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLS 702
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ H N ++A++AA HLF+L+ G Y++L+ +YA AG DD ++VR+L++ G+KK+
Sbjct: 703 ACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKS 762
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E + V H F+A D++HP I++ L +L++++ GY +R+ E
Sbjct: 763 PGYSWMEVNNRV-HVFKAEDVSHPQVIAIREKLDELMEKIAHLGY---VRT--------E 810
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
R + HSEKLA+AFG+++ + IMKNLRIC+DCH + S V RE V+RD +
Sbjct: 811 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGV 870
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSC +YW
Sbjct: 871 RFHHFKGGSCSCMDYW 886
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 159/331 (48%), Gaps = 17/331 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
+F ++ ++ W ++ GY G +++ ++ SMR+ G P +FT + K+C
Sbjct: 114 LFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCG--- 170
Query: 67 DVSLG-QQIHAQTI-LLGGFTS--DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+LG ++ Q + LL F S D V ++ M V+CG + + K F + ++
Sbjct: 171 --ALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICR 228
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++V YA + ++ A +F +P +D V+W +++ ++ + REA++ M GV
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVR 288
Query: 183 TDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T ++ACA+L +++ + ++ P + V SA++++Y+KCG +A
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL---PHIDPYVASAMVELYAKCGCFKEA 345
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F ++ RN S++ +I GF +G +++LF M + +++ C +
Sbjct: 346 KRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNT 405
Query: 302 GLKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
C G S H C+ RA + +L
Sbjct: 406 MDICLG---SQLHSLCLKSGHTRAVVVSNSL 433
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 48/346 (13%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
++ L+ ++C ++ + +H++ I +G S +++ NT++ Y+ CG L +R +
Sbjct: 24 ITQALADALRSCGARSALTGARTLHSRLINVG-LASVVFLQNTLLHAYLSCGALSDARNL 82
Query: 111 F-DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
DE+ E +V++ ++ YA G + A LF +P +D +W +++GY Q+ + A
Sbjct: 83 LRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNA 142
Query: 170 IEYFERMQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
++ F M+ G + T V+ +C LG + A + + S F ++ V +AL
Sbjct: 143 LDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL--SKFDSQDDPDVQTAL 200
Query: 229 IDMYSKCGS-------------------------------IDDAYRIFVGMKQRNVFSYS 257
+DM +CG+ +D A IF M +R+V S++
Sbjct: 201 VDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWN 260
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-------- 309
+I + GR A+ + DM +P+ T+ LTAC+ + +G
Sbjct: 261 MVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN 320
Query: 310 -PSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P D Y + MV+L + GC +EA ++ + + N W L+G
Sbjct: 321 LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIG 365
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 326/557 (58%), Gaps = 20/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
+FE + ++ W A+I GY G ++ L+ M E + P FT++++ AC +
Sbjct: 146 LFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 205
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD--VVSWTE 124
+V +G+Q+HA IL + V N +I Y K G + +R++ D+ E D V+S+T
Sbjct: 206 NVRIGKQVHAY-ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 264
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GDMESA +F + +D VAWTAM+ GY QN + EAI+ F M G E +
Sbjct: 265 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 324
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+S CA L + Y + A S ++V +A+I MY++ GS A R+
Sbjct: 325 SYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV--SNAIITMYARSGSFPWARRM 382
Query: 245 FVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + ++ +++SMI+ A HG+ A+ LF +M++ +P+ +T++GVL+ACSH G
Sbjct: 383 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 442
Query: 304 KCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G ++P HYACMVDLL RAG EA + + +MPVEP+ WG+LL
Sbjct: 443 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 502
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++H+N E+A++AA L ++P+ G Y ++N+Y++ G W D +R+ + K ++K
Sbjct: 503 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 562
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G+SW R IH F A D+ HP + + + ++ G+ P+L+SVL+DV DE
Sbjct: 563 ETGFSWTH-IRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDE 621
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA+AFGL++T T+R+MKNLR+C DCH + S+V REI+VRD
Sbjct: 622 LKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDA 681
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 682 TRFHHFRDGLCSCKDYW 698
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 197/429 (45%), Gaps = 54/429 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++ WT ++ G G ++I M +G P FTL+ + +C
Sbjct: 12 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 71
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++G+++H+ + LG S + V N+++ MY KCG + VF+ MP R V SW +
Sbjct: 72 QAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAM 130
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETD 184
+ + G M+ A LF +P + V+W AM+ GY QN +A++ F RM + + + D
Sbjct: 131 VSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 190
Query: 185 YVTLVGVISACAQLGVIKYANWV------CEIAEGSGF-----------GPIN------- 220
T+ V+SACA LG ++ V E+A S G +
Sbjct: 191 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 250
Query: 221 -------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
NV+ +AL++ Y K G ++ A +F M R+V ++++MI+G+ +GR AI
Sbjct: 251 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 310
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLL 322
LF M+ +PN T VL+ C+ + YG + S+ ++ +
Sbjct: 311 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 370
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPD 376
R+G A +M +++ W +++ A H E A LFE +EPD
Sbjct: 371 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE----EAVGLFEEMLRAGVEPD 426
Query: 377 KIGNYIILS 385
+I +LS
Sbjct: 427 RITYVGVLS 435
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 52/291 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ WTA+I GY G ++I L+ SM G P S+TL+A+ C +
Sbjct: 279 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 338
Query: 66 LDVSLGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
+ G+QIH + I LL +S V N +I MY + G +R++FD++ R + ++W
Sbjct: 339 ACLDYGKQIHCRAIRSLLEQSSS---VSNAIITMYARSGSFPWARRMFDQVCWRKETITW 395
Query: 123 TELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVT-----GYVQNAKP------- 166
T +IVA A +G E A GLF E+ D++ + +++ G+V K
Sbjct: 396 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 455
Query: 167 ------------------------REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
EA E+ RM VE D + ++SAC V K
Sbjct: 456 EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACR---VHK 509
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
A AE NN SA+ ++YS CG DA RI+ K++ V
Sbjct: 510 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 560
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 30/204 (14%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+A +G + A G+F E+P +D V+WT MV G + + EAI+ M G TL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 189 VGVISACA--QLGVI--KYANWVCEIAEGSG----------FG---------------PI 219
V+S+CA Q G + K ++V ++ GS +G P+
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+V +A++ + + G +D A +F M R++ S+++MI G+ +G A++LF M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 280 V-KTETKPNGVTFIGVLTACSHVG 302
+ ++ P+ T VL+AC+++G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLG 205
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
M++K G + DA +F M +R+ S++ M++G GR AI+ DM P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 291 FIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLEEALKMVEKMP 339
VL++C+ VG K + +C ++++ G+ G E A + E+MP
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQI-AANHLFELEPDK 377
V W A+ + N + ++ A LFE PD+
Sbjct: 121 VRSVSS-WNAM-----VSLNTHLGRMDLAESLFESMPDR 153
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/553 (39%), Positives = 320/553 (57%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W+ ++ G+ G + + + R G+ P ++TL + + C + D
Sbjct: 57 LFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTD 116
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH +L G SD +V +++ MY KC IV
Sbjct: 117 LQIGRVIH-DVVLKHGLLSDHFVCASLVDMYAKC------------------------IV 151
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E A LF + KD V WT M+ Y + E++ F+RM+ GV D V
Sbjct: 152 -------VEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVA 203
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V++ACA+LG + A + + +GF +V++G+A+IDMY+KCGS++ A +F
Sbjct: 204 MVTVVNACAKLGAMHRARFANDYIVRNGFSL--DVILGTAMIDMYAKCGSVESAREVFDR 261
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK++NV S+S+MI + HGR AI LF M+ PN VTF+ +L ACSH GL
Sbjct: 262 MKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG 321
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + V P HY CMVDLLGRAG L+EAL+++E M VE + +W ALLGAC+
Sbjct: 322 LRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACR 381
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH E+A+ AAN L EL+P G+Y++LSNIYA AG W+ V++ R ++ LKK PG+
Sbjct: 382 IHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGW 441
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
+W+E D ++F GD +HP S EI + L L+ +L+ GY P+ VL DV +E K+
Sbjct: 442 TWIEVDNKT-YQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQE 500
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L THSEKLA+AFGL+ G +RI KNLR+C DCH F S ++ R I+VRD RFH
Sbjct: 501 MLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFH 560
Query: 536 HFQDGKCSCGNYW 548
HF DG CSCG+YW
Sbjct: 561 HFNDGTCSCGDYW 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+D+V +L+ YA + ++ A LF+ L ++D W+ MV G+ + F +
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV D TL VI C ++ + ++ G +++ V ++L+DMY+KC
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGL--LSDHFVCASLVDMYAKCI 150
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++DA R+F M +++ +++ MI +A A+ ++ LF M + P+ V + V+
Sbjct: 151 VVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVN 209
Query: 297 ACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC+ +G + G S M+D+ + G +E A ++ ++M E N
Sbjct: 210 ACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-EKNVI 268
Query: 346 VWGALLGACQIH 357
W A++ A H
Sbjct: 269 SWSAMIAAYGYH 280
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G + ++V+ + L+ Y++ +IDDAY +F G+ R+ ++S M+ GFA G F
Sbjct: 30 GTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATF 89
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----HVGLKCYGVSPS----TDHYAC--MVDLLGRA 325
++++ P+ T V+ C +G + V +DH+ C +VD+ +
Sbjct: 90 RELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKC 149
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGA 353
+E+A ++ E+M + + W ++GA
Sbjct: 150 IVVEDAQRLFERM-LSKDLVTWTVMIGA 176
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K KN W+A+I Y G KD+I L+ M I P T +L AC+
Sbjct: 256 REVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHA 315
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ G + D+ M+ + + G L + ++ + M E+D W+
Sbjct: 316 GLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSA 375
Query: 125 LIVAYANNGDMESAGGLFNEL 145
L+ A + ME A N L
Sbjct: 376 LLGACRIHSKMELAEKAANSL 396
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/555 (38%), Positives = 323/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ W A+I GY G K+++ L+ MR+ + P T+ ++ AC +
Sbjct: 215 RQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQS 274
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG + + I G S+L + N +I MY KCG
Sbjct: 275 NALDLGNSMRSW-IEDRGLCSNLKLVNALIDMYSKCG----------------------- 310
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+++A LF+++ +D ++W M+ GY +EA+ F M +GVE
Sbjct: 311 --------DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T + ++ +CA LG I W+ F + + ++LID+Y+KCG+I A ++F
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYI-NKNFN-SVSTSLSTSLIDLYAKCGNIVAARQVF 420
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
GMK +++ S+++MI G AMHG+A A +LF M +PN +TF+G+L+AC H GL
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y +SP + HY CM+DLLGRAG EEA +++ M V+P+G +WG+LLGA
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H E+ ++ A LFELEPD G Y++LSNIYA AG WDDV+R+R L G+KK P
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVP 600
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G + +E D V+HEF GD HP S +I + L ++ ++L+ G+ + VLYD+ +E K
Sbjct: 601 GCTTIEVD-NVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWK 659
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AFGL++T PG +RI+KNLR+C +CH S++ REI+ RD R
Sbjct: 660 EGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNR 719
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 720 FHHFKDGSCSCNDYW 734
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 173/300 (57%), Gaps = 3/300 (1%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +F ++ N F+W ++IRG + ++ + M G+ P S+T L K+C
Sbjct: 80 SYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSC 139
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ G+QIHA + LG F SD+++ ++I MY + G + ++ VFD+ RD +S+
Sbjct: 140 AKLASAHEGKQIHAHVLKLG-FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISF 198
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI YA G M+ A LF+E+P+KD V+W AM+ GY Q + +EA+ FE M+ A V
Sbjct: 199 TALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T+V V+SACAQ + N + E G +N+ + +ALIDMYSKCG + A
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL--CSNLKLVNALIDMYSKCGDLQTAR 316
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +R+V S++ MI G+ A+ LF +M+ + +P +TF+ +L +C+H+G
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLG 376
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 45/267 (16%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A + +GD+ A LFN + + W +M+ G + P A+ +F RM Y+GVE + T
Sbjct: 72 AVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYT 131
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS---------- 237
++ +CA+L + GF +++V + ++LI+MY++ G
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGF--VSDVFIHTSLINMYAQSGEMNNAQLVFDQ 189
Query: 238 ---------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+D A ++F M ++V S+++MI G+A GR+ A+ LF
Sbjct: 190 SNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLF 249
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST---DHYAC--------MVDLLGRA 325
DM K PN T + VL+AC+ G S + D C ++D+ +
Sbjct: 250 EDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC 309
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLG 352
G L+ A ++ + M +E + W ++G
Sbjct: 310 GDLQTARELFDDM-LERDVISWNVMIG 335
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 220 NNVVVGSALIDM--YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
N + S LI+ S+ G I A +F +++ N+F ++SMI G +M A+ F
Sbjct: 59 NTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFV 118
Query: 278 DMVKTETKPNGVTFIGVLTACSHVG 302
M+ + +PN TF +L +C+ +
Sbjct: 119 RMIYSGVEPNSYTFPFLLKSCAKLA 143
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 324/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN WTA+I GYI GH +++I + + G+ P SF+L + AC + D
Sbjct: 171 VFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I + I G +++V +++ MYVKC
Sbjct: 231 CTSGEWID-RYISDSGMGRNVFVATSLLDMYVKC-------------------------- 263
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G++E A +F+ +P KD V+W+ M+ GY N P++A++ F +MQ ++ D T
Sbjct: 264 -----GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYT 318
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VGV+SACA LG + W + + + F ++N V+G+ALIDMYSKCGS+ A+ IF
Sbjct: 319 MVGVLSACATLGALDLGIWASSLMDRNEF--LSNPVLGTALIDMYSKCGSVTQAWEIFTA 376
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+++ +++M++G +M+G A A LF + K +P+ TFIG+L C+H G
Sbjct: 377 MKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEG 436
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + ++PS +HY CMVDLLGRAG L EA +++ MP++PN VWGALLG C+
Sbjct: 437 RQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCK 496
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++ +A+ L ELEP GNY+ LSNIY+ W++ ++R +K ++K
Sbjct: 497 LHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRAC 556
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D G++HEF GD +H S +I L +L L+A G+ P VL+D+ +EEK+
Sbjct: 557 SWIEID-GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEH 615
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL+ + P +R++KNLR+C DCH + S++ REI++RD RFH
Sbjct: 616 FLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFH 675
Query: 536 HFQDGKCSCGNYW 548
F DG CSC +YW
Sbjct: 676 TFIDGSCSCRDYW 688
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 193/360 (53%), Gaps = 46/360 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ +LVF QVK N FLW +IRG + + D+I LY SMR G P +FT+ + KAC
Sbjct: 65 NYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC 124
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
LDV LG +IH+ ++ G+ D++V +++ +YVKC
Sbjct: 125 ARKLDVRLGLKIHS-LLVKAGYDHDVFVKTSLLSLYVKCD-------------------- 163
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ + A +F+++P K+ V+WTA++TGY+ + REAI F+++ G++
Sbjct: 164 -----------NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +LV V++ACA+LG W+ SG G NV V ++L+DMY KCG+++ A
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG--RNVFVATSLLDMYVKCGNLERAN 270
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M ++++ S+S+MI G+A +G A+ LF M KP+ T +GVL+AC+ +G
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330
Query: 303 LKCYGVSPST----DHY-------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G+ S+ + + ++D+ + G + +A ++ M + + VW A++
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMM 389
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS + + +F +K+ N+F +++MI G AI L+G M PN T VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 296 TACS-----HVGLKCYG--VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC+ +GLK + V DH ++ L + ++ALK+ + +P + N
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNV 180
Query: 345 GVWGALL 351
W A++
Sbjct: 181 VSWTAII 187
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 333/556 (59%), Gaps = 20/556 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLD 67
FEQ+ ++ W ++I GY +G+ ++ ++ M R+ + P FTL+++ AC +
Sbjct: 235 FEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEK 294
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD--VVSWTEL 125
+ +G+QIH+ I+ GF V N +I MY +CG + +R++ ++ +D + +T L
Sbjct: 295 LCIGEQIHSH-IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y GDM A +F+ L +D VAWTAM+ GY Q+ EAI F M +
Sbjct: 354 LDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNS 413
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++S + L + + + A SG I +V V +ALI MY+K GSI A R F
Sbjct: 414 YTLAAMLSVASSLASLGHGKQIHGSAVKSG--EIYSVSVSNALITMYAKAGSITSASRAF 471
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
++ +R+ S++SMI+ A HG A A++LF M+ +P+ +T++GV +AC+H GL
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G + P+ HYACMVDL GRAG L+EA + +EKMP+EP+ WG+LL
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++++N ++ ++AA L LEP+ G Y L+N+Y++ G W++ +++R+ +K +KK
Sbjct: 592 ACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE 651
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+SW+E V H F D HP EI + + D ++ GY P+ SVL+D+ +E
Sbjct: 652 QGFSWIEVKHKV-HAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEV 710
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSEKLA+AFGL++T T+RIMKNLR+C DCH + S+++GREI+VRD
Sbjct: 711 KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTT 770
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 771 RFHHFKDGFCSCRDYW 786
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 50/417 (11%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+++ ++ WT +I GY G +I + M REGI P FTL+ + + +
Sbjct: 103 FDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCL 162
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+++H+ + L G ++ V N+++ MY KCG ++ VFD M +D+ SW +I
Sbjct: 163 ETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIAL 221
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYVT 187
+ G M+ A F ++ +D V W +M++GY Q A++ F +M + + + D T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFT 281
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR---- 243
L V+SACA L + + +GF I+ +V+ +ALI MYS+CG ++ A R
Sbjct: 282 LASVLSACANLEKLCIGEQIHSHIVTTGF-DISGIVL-NALISMYSRCGGVETARRLIEQ 339
Query: 244 -----------------------------IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
IF +K R+V ++++MI+G+ HG AI
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAIN 399
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVS-PSTDHYA-----CMVDLLG 323
LF MV E +PN T +L+ S + G + +G + S + Y+ ++ +
Sbjct: 400 LFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA-QIAANHLFE-LEPDKI 378
+AG + A + + + E + W +++ A H + E A ++ L E L PD I
Sbjct: 460 KAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 54/340 (15%)
Query: 49 GPVSFTLSALFKACTEVLDVSL--------GQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
PV +LS L + CT +L S+ Q +H + ++ G +Y+ N ++ +Y K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCR-VIKSGLVFSVYLMNNLMNVYSK 61
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
G+ +RK+FDEMP R SW ++ AYA GDM+S+ F+ LP +D V+WT M+ GY
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGY 121
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
+ +AI M G+E TL V+++ A ++ V G
Sbjct: 122 KNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI--VKLGLRG 179
Query: 221 NVVVGSALIDMYSKC-------------------------------GSIDDAYRIFVGMK 249
NV V ++L++MY+KC G +D A F M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGLKCYG- 307
+R++ +++SMI G+ G A+ +F M++ P+ T VL+AC+++ C G
Sbjct: 240 ERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGE 299
Query: 308 ------VSPSTDHYA----CMVDLLGRAGCLEEALKMVEK 337
V+ D ++ + R G +E A +++E+
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 35/255 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ +K ++ WTA+I GY G ++I+L+ SM E P S+TL+A+ + +
Sbjct: 369 IFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLAS 428
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
+ G+QIH + G S + V N +I MY K G + + + FD + ERD VSWT +I
Sbjct: 429 LGHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMI 487
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+A A +G E EA+E FE M G+ D++
Sbjct: 488 IALAQHGHAE-------------------------------EALELFETMLMEGLRPDHI 516
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T VGV SAC G++ ++ + I + + ++D++ + G + +A
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVD-KIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 247 GMK-QRNVFSYSSMI 260
M + +V ++ S++
Sbjct: 576 KMPIEPDVVTWGSLL 590
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 325/557 (58%), Gaps = 20/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
+FE + ++ W A+I GY G ++ L+ M E + P FT++++ AC +
Sbjct: 252 LFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD--VVSWTE 124
+V +G+Q+HA IL + V N +I Y K G + +R++ D+ E D V+S+T
Sbjct: 312 NVRIGKQVHAY-ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 370
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GDMESA +F + +D VAWTAM+ GY QN + EAI+ F M G E +
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+S CA L + Y + A S ++V +A+I MY++ GS A R+
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV--SNAIITMYARSGSFPWARRM 488
Query: 245 FVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + R +++SMI+ A HG+ A+ LF +M++ +P+ +T++GVL+ACSH G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 304 KCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G ++P HYACMVDLL RAG EA + + +MPVEP+ WG+LL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++H+N E+A++AA L ++P+ G Y ++N+Y++ G W D +R+ + K ++K
Sbjct: 609 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 668
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G+SW R IH F A D+ HP + + + ++ G+ P+L+SVL+DV DE
Sbjct: 669 ETGFSWTH-IRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDE 727
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA+AFGL++T T+R+MKNLR+C DCH + S+V REI+VRD
Sbjct: 728 LKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDA 787
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 788 TRFHHFRDGLCSCKDYW 804
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 197/429 (45%), Gaps = 54/429 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++ WT ++ G G ++I M +G P FTL+ + +C
Sbjct: 118 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 177
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++G+++H+ + LG S + V N+++ MY KCG + VF+ MP R V SW +
Sbjct: 178 QAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAM 236
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETD 184
+ + G M+ A LF +P + V+W AM+ GY QN +A++ F RM + + + D
Sbjct: 237 VSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 296
Query: 185 YVTLVGVISACAQLGVIKYANWV------CEIAEGSGF-----------GPIN------- 220
T+ V+SACA LG ++ V E+A S G +
Sbjct: 297 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 356
Query: 221 -------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
NV+ +AL++ Y K G ++ A +F M R+V ++++MI+G+ +GR AI
Sbjct: 357 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 416
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLL 322
LF M+ +PN T VL+ C+ + YG + S+ ++ +
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 476
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPD 376
R+G A +M +++ W +++ A H E A LFE +EPD
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE----EAVGLFEEMLRAGVEPD 532
Query: 377 KIGNYIILS 385
+I +LS
Sbjct: 533 RITYVGVLS 541
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 37/281 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK----CGFLGCSRKVFDE 113
L + C + G+ IHA+ + G + Y+ N ++ Y + G L +R++FDE
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVK-AGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDE 90
Query: 114 MP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
+P R+V +W L+ +A +G + A G+F E+P +D V+WT MV G + + EAI+
Sbjct: 91 IPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIK 150
Query: 172 YFERMQYAGVETDYVTLVGVISACA--QLGVI--KYANWVCEIAEGSG----------FG 217
M G TL V+S+CA Q G + K ++V ++ GS +G
Sbjct: 151 TLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYG 210
Query: 218 ---------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
P+ +V +A++ + + G +D A +F M R++ S+++MI G
Sbjct: 211 KCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAG 270
Query: 263 FAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVG 302
+ +G A++LF M+ ++ P+ T VL+AC+++G
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 52/291 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ WTA+I GY G ++I L+ SM G P S+TL+A+ C +
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 444
Query: 66 LDVSLGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
+ G+QIH + I LL +S V N +I MY + G +R++FD++ R + ++W
Sbjct: 445 ACLDYGKQIHCRAIRSLLEQSSS---VSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501
Query: 123 TELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVT-----GYVQNAKP------- 166
T +IVA A +G E A GLF E+ D++ + +++ G+V K
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561
Query: 167 ------------------------REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
EA E+ RM VE D + ++SAC V K
Sbjct: 562 EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACR---VHK 615
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
A AE NN SA+ ++YS CG DA RI+ K++ V
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
NV ++L+ M++K G + DA +F M +R+ S++ M++G GR AI+ DM
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLE 329
P T VL++C+ VG K + +C ++++ G+ G E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 330 EALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI-AANHLFELEPDK 377
A + E+MPV W A+ + N + ++ A LFE PD+
Sbjct: 217 TATTVFERMPVRSVSS-WNAM-----VSLNTHLGRMDLAESLFESMPDR 259
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 323/544 (59%), Gaps = 18/544 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHA--- 76
W A+I GY+ +G +++ L M GI +T +++ A + ++G+Q+HA
Sbjct: 242 WNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVL 301
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
+T++ L V N +I +Y +CG L +R+VFD+MP +D+VSW ++ N +E
Sbjct: 302 RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIE 361
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A +F E+P++ + WT M++G QN E ++ F +M+ G+E G I++C+
Sbjct: 362 EANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCS 421
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
LG + + ++ G +++ VG+ALI MYS+CG ++ A +F+ M + S+
Sbjct: 422 VLGSLDNGQQLH--SQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSW 479
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK------------ 304
++MI A HG AIQL+ M+K + P+ +TF+ +L+ACSH GL
Sbjct: 480 NAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRV 539
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
CYG++P DHY+ ++DLL RAG EA + E MP EP +W ALL C IH N E+
Sbjct: 540 CYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGI 599
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AA+ L EL P + G YI LSN+YA+ G WD+V+RVR+L++ G+KK PG SW+E + +
Sbjct: 600 QAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVE-NM 658
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
+H F D HP + + L L+ ++ GY P+ + VL+D+ E+K+ L THSEKL
Sbjct: 659 VHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKL 718
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+ +G++ GAT+R+ KNLRIC DCH S+V+ REI+VRD RFHHF++G+CSC
Sbjct: 719 AVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSC 778
Query: 545 GNYW 548
NYW
Sbjct: 779 SNYW 782
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 171/424 (40%), Gaps = 60/424 (14%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG-QQIHAQT 78
+ A+I + ++ L+ M+R G P FT S++ A + + D QQ+H +
Sbjct: 98 YNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEV 157
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCG---------FLGCSRKVFDEMP--ERDVVSWTELIV 127
G + V N ++ YV C + +RK+FDE P RD +WT +I
Sbjct: 158 FKWGALSVP-SVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIA 216
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y N D+ +A L + VAW AM++GYV EA + RM G++ D T
Sbjct: 217 GYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYT 276
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV--VGSALIDMYSKCGS-------- 237
VISA + G+ V + P + V V +ALI +Y++CG
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 238 -----------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
I++A IF M R++ +++ MI G A +G ++
Sbjct: 337 DKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLK 396
Query: 275 LFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLG 323
LF M +P + G + +CS H + G S ++ +
Sbjct: 397 LFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYS 456
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIGNY 381
R G +E A + MP + W A++ A H + Q+ L E + PD+I
Sbjct: 457 RCGLVEAADTVFLTMPY-VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFL 515
Query: 382 IILS 385
ILS
Sbjct: 516 TILS 519
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 51/296 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ ++ WT +I G G ++ + L+ M+ EG+ P + + +C+ +
Sbjct: 366 IFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGS 425
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQ+H+Q I L G S L VGN +I MY +CG + + VF MP D VSW +I
Sbjct: 426 LDNGQQLHSQIIQL-GHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIA 484
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A A +G G+ +AI+ +E+M + D +T
Sbjct: 485 ALAQHGH-----GV--------------------------QAIQLYEKMLKEDILPDRIT 513
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG--------SALIDMYSKCGSID 239
+ ++SAC+ G++K EG + V G S LID+ + G
Sbjct: 514 FLTILSACSHAGLVK---------EGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFS 564
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
+A + M + + +++ G +HG IQ +++ + +G T+I +
Sbjct: 565 EAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDG-TYISL 619
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 169/406 (41%), Gaps = 73/406 (17%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
S + +HA IL GF + N +I Y K + +R +FD++P+ D+V+ T ++
Sbjct: 12 TSFARAVHAH-ILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLS 70
Query: 128 AYANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AY+ G+++ A LFN P+ +D V++ AM+T + + A++ F +M+ G D
Sbjct: 71 AYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDP 130
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSI----- 238
T V+ A L +I C+ F G ++ V +AL+ Y C S
Sbjct: 131 FTFSSVLGA---LSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNS 187
Query: 239 ----------------------------------DD---AYRIFVGMKQRNVFSYSSMIL 261
DD A + GM ++++MI
Sbjct: 188 CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMIS 247
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----------VSP 310
G+ G A L M + + T+ V++A S+ GL G V P
Sbjct: 248 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 307
Query: 311 STDHYA-----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
S H+ ++ L R G L EA ++ +KMPV+ + W A+L C R E
Sbjct: 308 S-GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIE---- 361
Query: 366 AANHLF-ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
AN +F E+ + + ++ + A G ++ ++ +K+ GL+
Sbjct: 362 EANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLE 407
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 324/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN WTA+I GYI GH +++I + + G+ P SF+L + AC + D
Sbjct: 171 VFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I + I G +++V +++ MYVKC
Sbjct: 231 CTSGEWID-RYISDSGMGRNVFVATSLLDMYVKC-------------------------- 263
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G++E A +F+ +P KD V+W+ M+ GY N P++A++ F +MQ ++ D T
Sbjct: 264 -----GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYT 318
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VGV+SACA LG + W + + + F ++N V+G+ALIDMYSKCGS+ A+ IF
Sbjct: 319 MVGVLSACATLGALDLGIWASSLMDRNEF--LSNPVLGTALIDMYSKCGSVTQAWEIFTA 376
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+++ +++M++G +M+G A A LF + K +P+ TFIG+L C+H G
Sbjct: 377 MKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEG 436
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + ++PS +HY CMVDLLGRAG L EA +++ MP++PN VWGALLG C+
Sbjct: 437 RQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCK 496
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++ +A+ L ELEP GNY+ LSNIY+ W++ ++R +K ++K
Sbjct: 497 LHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRAC 556
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D G++HEF GD +H S +I L +L L+A G+ P VL+D+ +EEK+
Sbjct: 557 SWIEID-GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEH 615
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL+ + P +R++KNLR+C DCH + S++ REI++RD RFH
Sbjct: 616 FLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFH 675
Query: 536 HFQDGKCSCGNYW 548
F DG CSC +YW
Sbjct: 676 TFIDGSCSCRDYW 688
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 192/360 (53%), Gaps = 46/360 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ +LVF QVK N FLW +IRG + + D+I LY SMR G P +FT+ + KAC
Sbjct: 65 NYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC 124
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
LDV LG +IH+ ++ G+ D++V +++ +YVKC
Sbjct: 125 ARKLDVRLGLKIHS-LLVKAGYDHDVFVKTSLLSLYVKCD-------------------- 163
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ + A +F+++P K+ V+WTA++TGY+ + REAI F+++ G++
Sbjct: 164 -----------NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +LV V++ACA+LG W+ SG G NV V ++L+DMY KCG+++ A
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG--RNVFVATSLLDMYVKCGNLERAN 270
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M ++++ S+S+MI G+A +G A+ LF M KP+ T +GVL+AC+ +G
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330
Query: 303 LKCYGVSPST----DHY-------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G+ S+ + + ++D+ + G + +A ++ M + VW A++
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMM 389
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS + + +F +K+ N+F +++MI G AI L+G M PN T VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 296 TACS-----HVGLKCYG--VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC+ +GLK + V DH ++ L + ++ALK+ + +P + N
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNV 180
Query: 345 GVWGALL 351
W A++
Sbjct: 181 VSWTAII 187
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 315/541 (58%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WTA+I GYI L++ L+ M E + P T+ +L +C V V LG+++HA I
Sbjct: 200 WTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAY-I 258
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L GF L + ++ MY KCG ++ SA
Sbjct: 259 LRNGFGMSLALATALVDMYGKCG-------------------------------EIRSAR 287
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+ + KD + WTAM++ Y Q A + F +M+ GV + +T+V ++S CA G
Sbjct: 288 AIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNG 347
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ W + G +V++ +ALIDMY+KCG I A R+F R++ +++ M
Sbjct: 348 ALDMGKWFHAYIDKQGVEV--DVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVM 405
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YG 307
+ G+ MHG A++LF +M KPN +TFIG L ACSH GL +G
Sbjct: 406 MAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFG 465
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY CMVDLLGRAG L+EA KM+E MPV PN +WGA+L AC+IH+N + ++AA
Sbjct: 466 LVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAA 525
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L LEP G +++SNIYA+A W+DV+ +R+ +K TG+KK PG S +E + G++H+
Sbjct: 526 RELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVN-GLVHD 584
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F+ GD HP +I + L ++ +L+ GY P+ VL+++ +EEK+ L HSEKLA+A
Sbjct: 585 FKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMA 644
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGL++T+PG +R++KNLRIC+DCH S++ R I+VRD RFHHF++G CSCG Y
Sbjct: 645 FGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGY 704
Query: 548 W 548
W
Sbjct: 705 W 705
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 170/340 (50%), Gaps = 24/340 (7%)
Query: 29 LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDL 88
+ H + +++ Y MR+ I SF + ++ KAC+++ +G++IH ++ G SD+
Sbjct: 86 FESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVK-NGLVSDV 144
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
+V N ++ MY +CG L +R +FD+M ERDVVSW+ +I AY LF +
Sbjct: 145 FVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQR 195
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+WTAM+ GY++ E F RM V + +T++ +I +C +G ++ +
Sbjct: 196 SIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLH 255
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+GFG ++ + +AL+DMY KCG I A IF MK ++V ++++MI +A
Sbjct: 256 AYILRNGFG--MSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANC 313
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYAC 317
A QLF M +PN +T + +L+ C+ H + GV
Sbjct: 314 IDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA 373
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
++D+ + G + A ++ + ++ + W ++ +H
Sbjct: 374 LIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMH 412
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/557 (40%), Positives = 330/557 (59%), Gaps = 51/557 (9%)
Query: 6 RLVFEQVKY--KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE+ + K + AL+ GY+ D++ L+ M EG+ S TL L AC
Sbjct: 95 RKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACV 154
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+++ LG +H T L GF SD+ V N I MY+KCG + ++K
Sbjct: 155 SPINLELGSSLHCST-LKYGFDSDVSVVNCFITMYMKCGSVNYAQK-------------- 199
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF+E+P+K ++W AMV+GY QN +E + M GV
Sbjct: 200 -----------------LFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VTLVGV+S+CA LG + V + SGF +N + +ALI+MY++CG++ A
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGF--TSNPFLNNALINMYARCGNLTKAQA 300
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F GM +R + S++++I G+ MHG A+QLF +M+++ +P+G F+ VL+ACSH GL
Sbjct: 301 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 360
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P +HY+CMVDLLGRAG L+EA ++E MP++P+G VWGALL
Sbjct: 361 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 420
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N E+A++A + ELEP+ IG Y++LSNIY++A V R+R ++K LKK
Sbjct: 421 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 480
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+PG S++E +G +H F GD H S EI + L +L + + +P + + S++
Sbjct: 481 DPGCSYVE-LKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNK 537
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+ + HSEKLA+AFGLL T+ GA V I+KNLRICEDCHLF S+++ R++ VRD
Sbjct: 538 DGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDA 597
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 598 TRFHHFRNGSCSCKDYW 614
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 184/400 (46%), Gaps = 49/400 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R + ++SLY M R G P +FT K+C + LG Q H Q I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ-I 66
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G + +V +I MY K + +RKVF+E
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE-------------------------- 100
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
N K V + A+V+GYV N+K +A+ F +M GV + VTL+G+I AC
Sbjct: 101 ---NFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPI 157
Query: 200 VIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
++ + + C + +G ++V V + I MY KCGS++ A ++F M + + S+++
Sbjct: 158 NLELGSSLHCSTLK---YGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNA 214
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYG 307
M+ G+A +G A ++L+ +M P+ VT +GVL++C+++G ++ G
Sbjct: 215 MVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASG 274
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ + ++++ R G L +A + + MP E W A++G +H + EIA
Sbjct: 275 FTSNPFLNNALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLF 333
Query: 368 NHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+ +EPD +LS + AG+ D +++K
Sbjct: 334 KEMIRSGIEPDGTAFVCVLSAC-SHAGLTDQGLEYFKMMK 372
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ + +F+++ K W A++ GY G + + LY +M G+ P TL + +C
Sbjct: 195 NYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 254
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ S+G ++ + + GFTS+ ++ N +I MY +CG L ++ VFD MPER +VSW
Sbjct: 255 ANLGAQSVGHEVEFK-MQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 313
Query: 123 TELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
T +I Y +G E A LF E+ D A+ +++ + +EYF+ M+
Sbjct: 314 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 372
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 326/557 (58%), Gaps = 48/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+++ ++ W ++ G++ G + + ++ MRR+G TL AL AC +V
Sbjct: 179 RVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDV 238
Query: 66 LDVSLGQQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+D+ +G++IH + G G + ++ N++I MY C + C+RK
Sbjct: 239 MDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARK-------------- 284
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF L +KD V+W ++++GY + +A+E F RM G
Sbjct: 285 -----------------LFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VT++ V++AC Q+ ++ V G+ + NVVVG+ALI MY+ CGS+ A R
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGY--VVNVVVGTALIGMYANCGSLVCACR 385
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M ++N+ + + M+ GF +HGR AI +F +M+ P+ F VL+ACSH GL
Sbjct: 386 VFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGL 445
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y V P HY+C+VDLLGRAG L+EA ++E M ++PN VW ALL
Sbjct: 446 VDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALL 505
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++HRN ++A I+A LFEL PD + Y+ LSNIYA+ W+DV VR L+ L+K
Sbjct: 506 SACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRK 565
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
P YS++E ++ ++H+F GD +H S +I L DL ++L+ GY+P+ VLYDV +E
Sbjct: 566 PPSYSFVELNK-MVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEE 624
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+++L HSE+LALAF L+ T PG T+RI KNLR+C DCH + S++ REI++RD
Sbjct: 625 IKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDI 684
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG YW
Sbjct: 685 CRFHHFRDGLCSCGGYW 701
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 33/299 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + +F+Q+ KN FLW ++IRGY ++ LY M G P +FT + KAC
Sbjct: 76 YAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACG 135
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++L +G+++HA +++GG D+YVGN+++ MY K G + +R VFD M RD+ SW
Sbjct: 136 DLLLREMGRKVHA-LVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWN 194
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ +G+V+N + R A E F M+ G
Sbjct: 195 TMM-------------------------------SGFVKNGEARGAFEVFGDMRRDGFVG 223
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D TL+ ++SAC + +K + + G + N + +++IDMY C S+ A
Sbjct: 224 DRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCAR 283
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F G++ ++V S++S+I G+ G A A++LFG MV P+ VT I VL AC+ +
Sbjct: 284 KLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 46/294 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +FE ++ K+ W +LI GY G ++ L+ M G P T+ ++ AC
Sbjct: 280 SCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAAC 339
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG + + ++ G+ ++ VG +IGMY CG L C+ +VFDEMPE++
Sbjct: 340 NQISALRLGATVQSY-VVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKN---- 394
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LP A T MVTG+ + + REAI F M GV
Sbjct: 395 ----------------------LP-----ACTVMVTGFGIHGRGREAISIFYEMLGKGVT 427
Query: 183 TDYVTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D V+SAC+ G++ + ++ P S L+D+ + G +D+A
Sbjct: 428 PDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEP--RPTHYSCLVDLLGRAGYLDEA 485
Query: 242 YRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAI----QLFGDMVKTETKPNGVT 290
Y + MK + N +++++ +H A+ +LF E P+GV+
Sbjct: 486 YAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLF------ELNPDGVS 533
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
R+ T+L YA G M A +F+++ LK+ W +M+ GY N P A+ + +
Sbjct: 55 RRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLK 114
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M + G + D T V+ AC L + + V + G +V VG++++ MY K
Sbjct: 115 MLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLE--EDVYVGNSILSMYFKF 172
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G ++ A +F M R++ S+++M+ GF +G A A ++FGDM + + T + +L
Sbjct: 173 GDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALL 232
Query: 296 TACSHV 301
+AC V
Sbjct: 233 SACGDV 238
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N + + L Y+ CG + A IF + +N F ++SMI G+A + A+ L+ M+
Sbjct: 57 NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116
Query: 281 KTETKPNGVTFIGVLTACSHVGLKCYG 307
KP+ T+ VL AC + L+ G
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMG 143
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 326/557 (58%), Gaps = 20/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
+FE + ++ W A+I GY G ++ L+ M E + P FT++++ AC +
Sbjct: 252 LFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD--VVSWTE 124
+V +G+Q+HA IL + V N +I Y K G + +R++ D+ E D V+S+T
Sbjct: 312 NVRIGKQVHAY-ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 370
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GDMESA +F + +D VAWTAM+ GY QN + EAI+ F M G E +
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+S CA L + Y + A S ++V +A+I MY++ GS A R+
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSV--SNAIITMYARSGSFPWARRM 488
Query: 245 FVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + ++ +++SMI+ A HG+ A+ LF +M++ +P+ +T++GVL+ACSH G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 304 KCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G ++P HYACMVDLL RAG EA + + +MPVEP+ WG+LL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++H+N E+A++AA L ++P+ G Y ++N+Y++ G W D +R+ + K ++K
Sbjct: 609 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 668
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G+SW R IH F A D+ HP + + + ++ G+ P+L+SVL+DV DE
Sbjct: 669 ETGFSWTH-IRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDE 727
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA+AFGL++T T+R+MKNLR+C DCH + S+V REI+VRD
Sbjct: 728 LKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDA 787
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 788 TRFHHFRDGLCSCKDYW 804
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 197/429 (45%), Gaps = 54/429 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++ WT ++ G G ++I M +G P FTL+ + +C
Sbjct: 118 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 177
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++G+++H+ + LG S + V N+++ MY KCG + VF+ MP R V SW +
Sbjct: 178 QAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAM 236
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETD 184
+ + G M+ A LF +P + V+W AM+ GY QN +A++ F RM + + + D
Sbjct: 237 VSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 296
Query: 185 YVTLVGVISACAQLGVIKYANWV------CEIAEGSGF-----------GPIN------- 220
T+ V+SACA LG ++ V E+A S G +
Sbjct: 297 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 356
Query: 221 -------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
NV+ +AL++ Y K G ++ A +F M R+V ++++MI+G+ +GR AI
Sbjct: 357 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 416
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLL 322
LF M+ +PN T VL+ C+ + YG + S+ ++ +
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMY 476
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPD 376
R+G A +M +++ W +++ A H E A LFE +EPD
Sbjct: 477 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE----EAVGLFEEMLRAGVEPD 532
Query: 377 KIGNYIILS 385
+I +LS
Sbjct: 533 RITYVGVLS 541
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 37/281 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK----CGFLGCSRKVFDE 113
L + C + G+ IHA+ + G + Y+ N ++ Y + G L +R++FDE
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVK-AGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDE 90
Query: 114 MP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
+P R+V +W L+ +A +G + A G+F E+P +D V+WT MV G + + EAI+
Sbjct: 91 IPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIK 150
Query: 172 YFERMQYAGVETDYVTLVGVISACA--QLGVI--KYANWVCEIAEGSG----------FG 217
M G TL V+S+CA Q G + K ++V ++ GS +G
Sbjct: 151 TLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYG 210
Query: 218 ---------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
P+ +V +A++ + + G +D A +F M R++ S+++MI G
Sbjct: 211 KCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAG 270
Query: 263 FAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVG 302
+ +G A++LF M+ ++ P+ T VL+AC+++G
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 52/291 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ WTA+I GY G ++I L+ SM G P S+TL+A+ C +
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 444
Query: 66 LDVSLGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
+ G+QIH + I LL +S V N +I MY + G +R++FD++ R + ++W
Sbjct: 445 ACLDYGKQIHCRAIRSLLERSSS---VSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501
Query: 123 TELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVT-----GYVQNAKP------- 166
T +IVA A +G E A GLF E+ D++ + +++ G+V K
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561
Query: 167 ------------------------REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
EA E+ RM VE D + ++SAC V K
Sbjct: 562 EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACR---VHK 615
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
A AE NN SA+ ++YS CG DA RI+ K++ V
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
NV ++L+ M++K G + DA +F M +R+ S++ M++G GR AI+ DM
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLE 329
P T VL++C+ VG K + +C ++++ G+ G E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 330 EALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI-AANHLFELEPDK 377
A + E+MPV W A+ + N + ++ A LFE P +
Sbjct: 217 TASTVFERMPVRSVSS-WNAM-----VSLNTHLGRMDLAESLFESMPGR 259
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 330/558 (59%), Gaps = 56/558 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +FE++ ++ F WTA++ G++ G L ++ + +F+
Sbjct: 263 SEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA-------------------TRIFEEM 303
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
E +VS N MI YV+ + +R++FD+MP R+ SW
Sbjct: 304 PEKNEVSW---------------------NAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ YA G+++ A LF+E+P +D ++W AM++GY Q+ + EA+ F +M+ G
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ L +S+CA++ ++ + +GF + G+AL+ MY KCGSI++A+
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ--TGYIAGNALLAMYGKCGSIEEAF 460
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + ++++ S+++MI G+A HG A+ LF M K KP+ VT +GVL+ACSH G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG 519
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YG++ + HY CM+DLLGRAG L+EAL +++ MP P+ WGAL
Sbjct: 520 LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA +IH + E+ + AA +FE+EPD G Y++LSN+YA++G W +V +R ++ G+K
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E + H F GD +HP + I L +L L+ DG+ + + VL+DV +
Sbjct: 640 KVPGYSWVE-IQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ +L HSEKLA+AFG+L+ PG +R++KNLR+CEDCH + S++ R+I+VRD
Sbjct: 699 EEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF +G CSCG+YW
Sbjct: 759 SNRFHHFSEGSCSCGDYW 776
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 31/366 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F Q+ K+ W A++ G+ G ++++ ++ M + + LSA
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAY---- 194
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
V G+ A+ + ++ N ++G YV+ L +R +FD MP RD +SW
Sbjct: 195 -----VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISW 249
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I YA NG + A LF ELP++D AWTAMV+G+VQN EA FE M E
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----E 305
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ V+ +I+ Q I+ A + + N +V G Y++CG+ID A
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG------YAQCGNIDQAK 359
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV- 301
+F M QR+ S+++MI G+A G++ A+ LF M + N L++C+ +
Sbjct: 360 ILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIA 419
Query: 302 ----GLKCYG----VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + +G T + A ++ + G+ G +EEA + E + E + W ++
Sbjct: 420 ALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI-TEKDIVSWNTMI 478
Query: 352 GACQIH 357
H
Sbjct: 479 AGYARH 484
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 169/372 (45%), Gaps = 39/372 (10%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL-----FKACTEVLDVSLGQQI 74
W I Y+ +G + ++S++ MRR + +S F +V + + +
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL 122
Query: 75 HAQTILLGGFTS-----------------DLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ ++L G+ D+ N M+ + + GF+ +RK+FD+M +
Sbjct: 123 ISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK 182
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+ +SW L+ AY NG +E A LF+ + V+W ++ GYV+ + +A F+RM
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
D ++ +I+ AQ G++ A + E PI +V +A++ + + G
Sbjct: 243 V----RDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGM 292
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D+A RIF M ++N S+++MI G+ + A +LF D + + + T +
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF-DQMPSRNTSSWNTMVTGYAQ 351
Query: 298 CSHVGLK--CYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
C ++ + P D +A M+ ++G EEAL + KM + +GG+ A
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM--KRDGGILNRSALA 409
Query: 354 CQIHRNPEIAQI 365
C + EIA +
Sbjct: 410 CALSSCAEIAAL 421
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 26/299 (8%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
SD+ N I Y++ G + VF+ M R V++ +I Y +N + A +F ++
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P +D ++W M++GYV+N A F +M E D V+ ++S AQ G ++ A
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQNGFVEEAR 173
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + + N + + L+ Y + G I+DA R+F + S++ ++ G+
Sbjct: 174 KIFDQM------LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTDHYA--CM 318
R A LF M + +++ ++T + GL + + P D +A M
Sbjct: 228 KKRLDDARSLFDRMPVRDK----ISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAM 283
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
V + G L+EA ++ E+MP E N W A++ + E A LF+ P +
Sbjct: 284 VSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIE----KARELFDQMPSR 337
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/581 (37%), Positives = 321/581 (55%), Gaps = 79/581 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R + P + S + ++C + LG+ H Q I+ GF D+ + ++ Y K G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQ-IMKMGFEYDMILQTGLLDFYAKVG 59
Query: 103 FLGCSRKVFDEMPERDVV-------------------------------SWTELIVAYAN 131
L C+++VF MP RDVV SW +I Y
Sbjct: 60 DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCK 119
Query: 132 NGDMESAGGLFNELPLKDKVAWTA--------------------------------MVTG 159
GD+ SA +F+ P+KD V+W A M++
Sbjct: 120 LGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA 179
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
YVQ + AI F++MQ V+ VT+V ++SACA LG + W+
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI- 238
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+VV+G+ALIDMY KCG+++ A +F G+ ++N+F ++S+I+G M+GR AI F M
Sbjct: 239 -DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM 297
Query: 280 VKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGC 327
K KP+GVTF+G+L+ CSH GL YG+ P +HY CMVDLLGRAG
Sbjct: 298 EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGY 357
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNI 387
L+EAL+++ MP++PN V G+LL ACQIH++ ++ + L EL+P GNY+ LSN+
Sbjct: 358 LKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNL 417
Query: 388 YASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGD 447
YAS WDDV+ R+L+ G+ K PG S +E + ++HEF AGD +HP T+I L +
Sbjct: 418 YASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVN-NIVHEFVAGDTSHPQFTQINAFLDE 476
Query: 448 LLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRI 507
+ L+ G+ PN +VL+D+ +EEK+ + HSE++A+AFGL++T PG T+R++KNLR
Sbjct: 477 IAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRT 536
Query: 508 CEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
C DCH M S REI+VRD RFHHF++G CSC +YW
Sbjct: 537 CSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N W +I Y+ G +IS++ M+ E + P T+ +L AC + + +G+ I
Sbjct: 168 RNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 227
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H I D+ +GN +I MY KCG L + VF + +++ W +IV NG
Sbjct: 228 HGY-IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 286
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E EAI F M+ G++ D VT VG++S
Sbjct: 287 GE-------------------------------EAIAAFIVMEKEGIKPDGVTFVGILSG 315
Query: 195 CAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
C+ G++ + E+ G P V ++D+ + G + +A + M +
Sbjct: 316 CSHSGLLSAGQRYFSEMLGVYGLEP--GVEHYGCMVDLLGRAGYLKEALELIRAMPMKP- 372
Query: 254 FSYSSMILG 262
+SM+LG
Sbjct: 373 ---NSMVLG 378
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + KN F W ++I G + G +++I+ + M +EGI P T + C+
Sbjct: 262 VFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 321
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+S GQ+ ++ + + G + M+ + + G+L + ++ MP +
Sbjct: 322 LSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 329/552 (59%), Gaps = 46/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ + WT++I GY G +++ ++ MR+ + P L ++ +A T+V D
Sbjct: 230 VFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVED 289
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ IH I +G + + ++ +Y KCG + +R F+++
Sbjct: 290 LEHGKSIHGCVIKMG-LECEFDLLISLTSLYAKCGHVMVARLFFNQV------------- 335
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E+ +F W AM++GYV+N EAIE F M+ + D +T
Sbjct: 336 --------ENPSLIF----------WNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSIT 377
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ I+ACAQ+G ++ A W+ E S F N+V+V ++LID Y+KCGS+D A +F
Sbjct: 378 VTSSIAACAQIGSLELARWMDEYISMSEFR--NDVIVNTSLIDTYAKCGSVDMARFVFDR 435
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V +S+M++G+ +HG+ +I LF M + PN VTF+G+LTAC + GL
Sbjct: 436 IPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ YG+ P HYAC+VDLLGRAG L+ A V MP+EP VWGALL AC+I
Sbjct: 496 WDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKI 555
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
HR+ + + AA LF L+P G+Y+ LSN+YAS+ +WD V++VR L++ GL K+ GYS
Sbjct: 556 HRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYS 615
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E + G + F+AGD THP S EI + + DL RL+ G+ P+ SVL+D++ EE +
Sbjct: 616 VIEIN-GKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEET 674
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSE+LA+A+GL++T PG T+RI KNLR C++CH + S+++ REIVVRD RFHH
Sbjct: 675 LCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHH 734
Query: 537 FQDGKCSCGNYW 548
F+DG CSCG+YW
Sbjct: 735 FKDGACSCGDYW 746
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 169/368 (45%), Gaps = 50/368 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F++ + FLW A++R Y G +I +Y M+ + P F+ + KAC
Sbjct: 124 SCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKAC 183
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + +G+++H Q I GF SD++V N ++ +Y
Sbjct: 184 SALPALEMGRRVHGQ-IFRHGFESDVFVQNGLVALY------------------------ 218
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A G++ A +F L + V+WT++++GY QN +P EA+ F M+ V
Sbjct: 219 -------AKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++ LV V+ A + +++ + G ++++ +L +Y+KCG + A
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI--SLTSLYAKCGHVMVAR 329
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F ++ ++ +++MI G+ +G A AI+LF M +P+ +T + AC+ +G
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389
Query: 303 LKCYGVSPSTDHYACM-------------VDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
++ D Y M +D + G ++ A + +++P + + VW A
Sbjct: 390 --SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSA 446
Query: 350 LLGACQIH 357
++ +H
Sbjct: 447 MMVGYGLH 454
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+L+ +N G++ A LF++ P D W A+V Y ++ AIE + RMQ A V
Sbjct: 112 KLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSP 171
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + V+ AC+ L ++ V GF ++V V + L+ +Y+KCG I A
Sbjct: 172 DGFSFPCVLKACSALPALEMGRRVHGQIFRHGFE--SDVFVQNGLVALYAKCGEIVRANA 229
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F + R + S++S+I G+A +G+ A+++F +M KT +P+ + + VL A + V
Sbjct: 230 VFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
R VF+++ K+ +W+A++ GY L G ++SI L+ +MR+ G+ P T L AC
Sbjct: 430 RFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTAC 486
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/553 (40%), Positives = 331/553 (59%), Gaps = 43/553 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N +L+TALI G++ G+ ++I LY M E I P ++ ++++ KAC L
Sbjct: 93 IFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLA 152
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H++ + L GF+S+ V ++ +Y KCG LG +R+VF+EMPE DVV+
Sbjct: 153 LREGREVHSRALKL-GFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVA------ 204
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD V WTAM+ G+V+N + A+E F MQ V + T
Sbjct: 205 --------------------KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFT 244
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SAC+QLG ++ WV F N+ VG+ALI+MYS+CGSID+A +F
Sbjct: 245 IVCVLSACSQLGALEIGRWVHSYMR--KFEIELNLFVGNALINMYSRCGSIDEAQTVFDE 302
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK R+V +Y++MI G +M+G++ AI+LF MV +P VTF+GVL ACSH GL
Sbjct: 303 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 362
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V P +HY CMVDLLGR G LEEA ++ M + P+ + G LL AC+
Sbjct: 363 FEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 422
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N E+ + A L + G Y++LS++YAS+G W + ++VR +K G++K PG
Sbjct: 423 MHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 482
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + IHEF GDL HP I + L +L L+ +GY P VL D+ D EK+
Sbjct: 483 SSIEVN-NEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEW 541
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LA+ +GL++T P +R+MKNLR+C DCH + +++ R+IVVRD RFH
Sbjct: 542 ALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFH 601
Query: 536 HFQDGKCSCGNYW 548
+F++G CSCG+YW
Sbjct: 602 YFENGACSCGDYW 614
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ SKC +ID A RIF NV+ Y+++I GF G AIQL+ M+ P+
Sbjct: 77 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 136
Query: 288 GVTFIGVLTAC-SHVGLK----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+L AC S + L+ G S + +++L G+ G L +A ++ E
Sbjct: 137 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE 196
Query: 337 KMP---VEPNGGVWGALL 351
+MP V + W A++
Sbjct: 197 EMPEDVVAKDTVCWTAMI 214
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 340/561 (60%), Gaps = 24/561 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT++ Y+ G + ++++C M G+ P S TLS++ AC+E+
Sbjct: 187 RRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH + G +++V + ++ +Y +C + +R VFD MP RDVVSW +
Sbjct: 247 KDLKSGRAIHGFAVR-HGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGV 305
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ AY N + + LF+++ K D+ W A++ G ++N + +A+E +MQ G
Sbjct: 306 LTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGF 365
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + +T+ + AC+ L ++ V C + G + + +AL+ MY+KCG ++
Sbjct: 366 KPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTM---TALVYMYAKCGDLNL 422
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ +F + +++V ++++MI+ AMHG + LF M+++ KPN VTF GVL+ CSH
Sbjct: 423 SRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSH 482
Query: 301 V-----GLKCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL+ + V P +HYACMVD+ RAG L EA + +++MP+EP WG
Sbjct: 483 SRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWG 542
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC++++N E+A+I+AN LFE+EP+ GNY+ L NI +A +W + S R L+K G
Sbjct: 543 ALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERG 602
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+ K PG SWL+ GDR +H F GD + S +I L +L +++++ GY+P+ VL D
Sbjct: 603 ITKTPGCSWLQVGDR--VHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQD 660
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK L +HSEKLA+AFG+L + +++R+ KNLRIC DCH + S+V+G I+
Sbjct: 661 IDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTII 720
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD++RFHHF++G CSC + W
Sbjct: 721 VRDSLRFHHFRNGNCSCQDLW 741
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 61/352 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + +P + LI + +G ++I LY S+R GI P + + KAC D
Sbjct: 88 LFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGD 147
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
S +++H I G SD ++GN +I Y KC + +R+VFD
Sbjct: 148 ASRVKEVHDDAIRCG-MMSDAFLGNALIHAYGKCKCVEGARRVFD--------------- 191
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+L +KD V+WT+M + YV PR + F M + GV+ + VT
Sbjct: 192 ----------------DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVT 235
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L ++ AC++L +K + A G I NV V SAL+ +Y++C S+ A +F
Sbjct: 236 LSSILPACSELKDLKSGRAIHGFAVRHGM--IENVFVCSALVSLYARCLSVKQARLVFDL 293
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M R+V S++ ++ + + + LF M + + T+ V+ C G
Sbjct: 294 MPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQT--- 350
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGACQI 356
E+A++M+ KM +PN + L AC I
Sbjct: 351 ---------------------EKAVEMLRKMQNLGFKPNQITISSFLPACSI 381
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ A N GD A LF+ +P D + +++ + P EAI + ++ G++
Sbjct: 71 RLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKP 130
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ V AC G A+ V E+ + + G +++ +G+ALI Y KC ++ A
Sbjct: 131 HNSVFLTVAKACGASG---DASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGAR 187
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F + ++V S++SM + G + +F +M KPN VT +L ACS +
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/562 (39%), Positives = 322/562 (57%), Gaps = 53/562 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +F+++ PFLW +++GY+ G ++S+Y MR G+ P FT + KAC
Sbjct: 86 SYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKAC 145
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG--FLGCSRKVFDEMPERDVV 120
E+ ++L+ G M G VK G F+ R
Sbjct: 146 AEL--------------------AELWAGLGMHGHVVKHGLEFVAAVR------------ 173
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
TEL++ Y G++ A LF + +D VAW A++ VQ +A++ F M AG
Sbjct: 174 --TELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGMAG 231
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D VT+V +SAC LG ++ + E A G +N++V +A +DM +KCG +D
Sbjct: 232 IKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGID--SNIIVHNARLDMCAKCGDMDK 289
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M QRNV S+S++I G+A++G + A+ LF M +PN VTF+ VL+ACSH
Sbjct: 290 AMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSH 349
Query: 301 VGLKCYG--------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
G G + P +HYACMVDLLGR+G LEEA ++ MP+E + G+
Sbjct: 350 TGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGI 409
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGALLGAC IH+N ++ Q A+ LFEL P+ +++LSN+YA+AG W V +VR+ +K
Sbjct: 410 WGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKK 469
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G +K YS +E + G IH GD +HP S I L DLL ++++ GY P SV +
Sbjct: 470 KGARKVAAYSSVEFN-GEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFH 528
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV DEEK+ L THSEKLA+AF L+ SP +R+MKNLRIC DCH F S++ REI
Sbjct: 529 DVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREI 588
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
++RD RFHHF++G CSC ++W
Sbjct: 589 IMRDKNRFHHFKNGICSCKDFW 610
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 32/251 (12%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GDM A LF+E+ W ++ GYV+N P +A+ + +M++ GV D T VI
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVV---------VGSALIDMYSKCGSIDDAYR 243
ACA+L + W +G G +VV V + L+ MY K G + A
Sbjct: 143 KACAELAEL----W-------AGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEF 191
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F M +R++ +++++I G + A+Q F +M KP+ VT + L+AC H+G
Sbjct: 192 LFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGC 251
Query: 303 ----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ G+ + + +D+ + G +++A+ + ++MP + N W ++G
Sbjct: 252 LETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMP-QRNVISWSTVIG 310
Query: 353 ACQIHRNPEIA 363
++ E A
Sbjct: 311 GYAVNGESEKA 321
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/561 (40%), Positives = 322/561 (57%), Gaps = 54/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL--FKACT 63
R F+++ NP + TA+ GY+ + S+ L+ +M V +AL F A
Sbjct: 4 RRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASA 63
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEMPERDVVS 121
V D + +HA I GF + V NTM+ Y K G L +RKVFD M ERDV
Sbjct: 64 RVPDRGVTASLHA-LIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDV-- 119
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG- 180
V+W +M+ Y QN EAI + +M G
Sbjct: 120 -----------------------------VSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 150
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ + V L V+ ACA G I+ + + G NV VG++++DMYSKCG ++
Sbjct: 151 GIKCNAVALSAVLLACAHAGAIQTGKHIHN--QVVRMGLEENVYVGTSIVDMYSKCGRVE 208
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A R F +K++N+ S+S+MI G+ MHGR A+++F +M ++ +PN +TFI VL ACS
Sbjct: 209 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 268
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +G+ +HY CMVDLLGRAGCL+EA ++++M V+P+ +W
Sbjct: 269 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 328
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+IH+N E+A+++ LFEL+ G Y++LSNIYA AGMW DV R+R L+K
Sbjct: 329 GALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTR 388
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
++K PGYS E +G I+ F GD +HP EI L LL+R+Q GY PN SVL+D
Sbjct: 389 RIEKPPGYSSFEL-KGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHD 447
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +EEK+ L HSEKLA+AF L+ + P + + I+KNLR+C DCH M +++ REI+
Sbjct: 448 LDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREII 507
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFHHF+DG CSC +YW
Sbjct: 508 IRDLQRFHHFKDGLCSCRDYW 528
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 63/313 (20%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R+ FDE+P+ + V TAM +GYV+N
Sbjct: 3 ARRAFDEIPD-------------------------------PNPVIVTAMASGYVRNNLV 31
Query: 167 REAIEYFERM---QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
++E F M A V + LV SA A++ + + GF N
Sbjct: 32 YHSLELFRAMIASDSASVVDEAAALVA-FSASARVPDRGVTASLHALIAKIGFE--RNAG 88
Query: 224 VGSALIDMYSKCGS--IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + ++D Y+K GS ++ A ++F M +R+V S++SMI +A +G + AI L+ M+
Sbjct: 89 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 147
Query: 282 T--ETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCL 328
K N V VL AC+H G + G+ + +VD+ + G +
Sbjct: 148 VGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 207
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFELEPDKI-GNYIILSN 386
E A + K+ E N W A++ +H R E +I E++ + NYI +
Sbjct: 208 EMASRAFRKIK-EKNILSWSAMITGYGMHGRGQEALEI----FTEMKRSGLRPNYITFIS 262
Query: 387 IYAS---AGMWDD 396
+ A+ AG+ D+
Sbjct: 263 VLAACSHAGLLDE 275
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 328/555 (59%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N FLW LIRGY G ++I LY M G+ P +FTL + KAC+ +
Sbjct: 102 RNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSAL 161
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH + ++ G+ DL+VG +I MY KCG + + +VFD++ RD V W +
Sbjct: 162 SAIGEGRSIH-EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ AYA NG P E+I M GV
Sbjct: 221 LAAYAQNG-------------------------------HPDESISLCREMAANGVRPTE 249
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLV VIS+ A + + Y + GF +N V +ALIDMY+KCGS+ A +F
Sbjct: 250 ATLVTVISSSADVACLPYGREIHGFGWRHGFQ--SNDKVKTALIDMYAKCGSVKVALALF 307
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
++++ V S++++I G+AMHG A A+ LF D ++ E +P+ +TF+GVL ACS
Sbjct: 308 ERLREKRVVSWNAIITGYAMHGLAVGALDLF-DKMRKEDRPDHITFVGVLAACSRGRLLD 366
Query: 300 ------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++ ++ YG++P+ HY CM+DLLG G L+EA ++ M V+P+ GVWGALL +
Sbjct: 367 EGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNS 426
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+A++A L ELEPD GNY+IL+N+YA +G W+ V ++R+++ +KKN
Sbjct: 427 CKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNI 486
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + ++ F AGD++H NS I L L + GY P+ SV +DV ++EK
Sbjct: 487 ACSWIEV-KNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEK 545
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ +HSE+LA+AFGL++TSPG + I KNLRICEDCH+ + S+++ REI VRD R
Sbjct: 546 TSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNR 605
Query: 534 FHHFQDGKCSCGNYW 548
+H F+ G CSCG++W
Sbjct: 606 YHSFKHGMCSCGDHW 620
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 48/317 (15%)
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
+ ++L ++C + ++ G+Q+HAQ LG + DL
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLA---------------------- 85
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
T+L+ YA + + +A LF+++P ++ W ++ GY N AI
Sbjct: 86 -----------TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAII 134
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+ +M G+ D TL V+ AC+ L I + E SG+ ++ VG+ALIDM
Sbjct: 135 LYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWE--RDLFVGAALIDM 192
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+KCG + DA R+F + R+ ++SM+ +A +G +I L +M +P T
Sbjct: 193 YAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATL 252
Query: 292 IGVLTACSHVGLKCYGVS----------PSTDHY-ACMVDLLGRAGCLEEALKMVEKMPV 340
+ V+++ + V YG S D ++D+ + G ++ AL + E++
Sbjct: 253 VTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR- 311
Query: 341 EPNGGVWGALLGACQIH 357
E W A++ +H
Sbjct: 312 EKRVVSWNAIITGYAMH 328
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
G N + + L+ +Y+ S+ +A +F + ++N+F ++ +I G+A +G AI L
Sbjct: 76 LGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIIL 135
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY-------------ACMVDLL 322
+ M+ +P+ T VL ACS L G S Y A ++D+
Sbjct: 136 YHKMLDYGLRPDNFTLPFVLKACS--ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMY 193
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+ GC+ +A ++ +K+ V + +W ++L A + +P+
Sbjct: 194 AKCGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNGHPD 231
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 326/555 (58%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVL 66
++ + + F +IR ++ + SISLY M R + P TL+ + +AC+
Sbjct: 88 IYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAF 147
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTEL 125
+ G Q+ I LG F D++V N +I +Y C + +++VFDE+P RDVVSW +
Sbjct: 148 AIREGAQVQTHVIKLG-FVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSM 206
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV + G + A LF E+P KD ++W +++G VQN + +A++YF+ + + +
Sbjct: 207 IVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNE 266
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
LV +++A AQLG ++Y + IA F P+ +G+AL+DMY+KCG ID++ +F
Sbjct: 267 AILVSLLAAAAQLGTLEYGKRIHSIANSLRF-PMT-ASLGTALVDMYAKCGCIDESRFLF 324
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++ +S++ MI G A HG A+ LF + P VTFIGVLTACS GL
Sbjct: 325 DRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVS 384
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ P +HY CMVDLL RAG + +A++M+ +MP P+ +W ++LG+
Sbjct: 385 EGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGS 444
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
CQ+H E+ + N L +++P G+Y+ L+ I+A W+DVS+VRRL+ K
Sbjct: 445 CQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIA 504
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+S +E + G +H F AGD H +TEI + L + R+ A GY N+ SVL+D+ +EEK
Sbjct: 505 GWSLIEAE-GRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEK 563
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSE+LA+AFGLL T G +RI+KNLR+C DCH S V REI+VRD R
Sbjct: 564 ENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSR 623
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 624 FHHFKKGICSCQDYW 638
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ + W +I G G +++++L+ +G PV+ T + AC+
Sbjct: 321 RFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRA 380
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
VS G+ G ++ M+ + + GF+ + ++ + MP D V W
Sbjct: 381 GLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWAS 440
Query: 125 LIVAYANNGDMESAGGLFNELPLKD 149
++ + +G +E + N+L D
Sbjct: 441 VLGSCQVHGFIELGEEIGNKLIQMD 465
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 329/558 (58%), Gaps = 56/558 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +FE++ ++ F WTA++ G++ G L ++ + +F+
Sbjct: 263 SEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA-------------------TRIFEEM 303
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
E +VS N MI YV+ + +R++FD+MP R+ SW
Sbjct: 304 PEKNEVSW---------------------NAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ YA G+++ A LF+E+P +D ++W AM++GY Q+ + EA+ F +M+ G
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ L +S+CA++ ++ + +GF + G+AL+ MY KCGSI++A+
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ--TGYIAGNALLAMYGKCGSIEEAF 460
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + ++++ S+++MI G+A HG A+ LF M K KP+ VT +GVL+ACSH G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG 519
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ YG++ + HY CM+DLLGRAG L+EAL +++ MP P+ WGAL
Sbjct: 520 FVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA +IH + E+ + AA +FE+EPD G Y++LSN+YA++G W +V +R ++ G+K
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E + H F GD +HP + I L +L L+ DG+ + + VL+DV +
Sbjct: 640 KVPGYSWVE-IQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ +L HSEKLA+AFG+L+ PG +R++KNLR+CEDCH + S++ R+I+VRD
Sbjct: 699 EEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF +G CSCG+YW
Sbjct: 759 SNRFHHFSEGSCSCGDYW 776
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 31/366 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F Q+ K+ W A++ G+ G ++++ ++ M + + LSA
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAY---- 194
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
V G+ A+ + ++ N ++G YV+ L +R +FD MP RD +SW
Sbjct: 195 -----VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISW 249
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I YA NG + A LF ELP++D AWTAMV+G+VQN EA FE M E
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----E 305
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ V+ +I+ Q I+ A + + N +V G Y++CG+ID A
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG------YAQCGNIDQAK 359
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV- 301
+F M QR+ S+++MI G+A G++ A+ LF M + N L++C+ +
Sbjct: 360 ILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIA 419
Query: 302 ----GLKCYG----VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + +G T + A ++ + G+ G +EEA + E + E + W ++
Sbjct: 420 ALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI-TEKDIVSWNTMI 478
Query: 352 GACQIH 357
H
Sbjct: 479 AGYARH 484
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 166/372 (44%), Gaps = 39/372 (10%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL-----FKACTEVLDVSLGQQI 74
W I Y+ +G + ++S++ MRR + +S F +V + + +
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL 122
Query: 75 HAQTILLGGFTS-----------------DLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ ++L G+ D+ N M+ + + GF+ +RK+FD+M +
Sbjct: 123 ISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK 182
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+ +SW L+ AY NG +E A LF+ + V+W ++ GYV+ + +A F+RM
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
D ++ +I+ AQ G++ A + E PI +V +A++ + + G
Sbjct: 243 V----RDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGM 292
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D+A RIF M ++N S+++MI G+ + A +LF M T G
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-YAQ 351
Query: 298 CSHVGLK--CYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
C ++ + P D +A M+ ++G EEAL + KM + +GG+ A
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM--KRDGGILNRSALA 409
Query: 354 CQIHRNPEIAQI 365
C + EIA +
Sbjct: 410 CALSSCAEIAAL 421
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 26/299 (8%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
SD+ N I Y++ G + VF+ M R V++ +I Y +N + A +F ++
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P +D ++W M++GYV+N A F +M E D V+ ++S AQ G ++ A
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQNGFVEEAR 173
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ + + N + + L+ Y + G I+DA R+F + S++ ++ G+
Sbjct: 174 KIFDQM------LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTDHYA--CM 318
R A LF M + +++ ++T + GL + + P D +A M
Sbjct: 228 KKRLDDARSLFDRMPVRDK----ISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAM 283
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
V + G L+EA ++ E+MP E N W A++ + E A LF+ P +
Sbjct: 284 VSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIE----KARELFDQMPSR 337
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/559 (39%), Positives = 323/559 (57%), Gaps = 20/559 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R + + + + W A+I GY+ G +D+++L+ MR G+ T +++ AC +
Sbjct: 243 REILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302
Query: 66 LDVSLGQQIHAQTILLGGFTSD----LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
LG+Q+HA IL D L VGNT+I +Y K G + +RK+F EMP +D+++
Sbjct: 303 GFFLLGKQVHAY-ILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIIT 361
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W L+ Y N G ME A F ++P K+ + WT M++G QN +A++ F +M+ G
Sbjct: 362 WNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY 421
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E + G I+AC+ LG ++ + A+ G + + VG+A+I MY++CG ++ A
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLH--AQIVHLGHDSTLSVGNAMITMYARCGIVEAA 479
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F+ M + S++SMI HG AI+L+ M+K P+ TF+ VL+ACSH
Sbjct: 480 RTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHA 539
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG++P DHYA M+DL RAG +A +++ MP E +W A
Sbjct: 540 GLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEA 599
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL C+ H N ++ AA LF+L P G Y++LSN+YAS G W+DV+R R+L++ G+
Sbjct: 600 LLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGV 659
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK P SW E + V H F D HP I L L ++ GY P+ + VL+D+
Sbjct: 660 KKEPACSWTEVENKV-HVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDME 718
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
E K+ L THSEKLA+AFGL+ GATVR+ KNLRIC DCH + S+V+GREIVVR
Sbjct: 719 SEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVR 778
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF++G+CSC NYW
Sbjct: 779 DGKRFHHFKNGECSCRNYW 797
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 177/409 (43%), Gaps = 60/409 (14%)
Query: 6 RLVFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F + + ++ + A+I GY +I L+ +MR P FT +++ A T
Sbjct: 99 REIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSAST 158
Query: 64 EVL-DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF---------LGCSRKVFDE 113
+ D Q+H T++ G V N ++ +YVKC + +RK+FDE
Sbjct: 159 LIFYDERQCGQMHG-TVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDE 217
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP+R+ WT LI Y NGD+ A + + + + +AW AM++GY+ + +A+ F
Sbjct: 218 MPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLF 277
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV--VGSALIDM 231
+M+ GV+ D T VISACA G V + P + + VG+ LI +
Sbjct: 278 RKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITL 337
Query: 232 YSKCGSIDDAYRI-------------------------------FVGMKQRNVFSYSSMI 260
Y K G +D A +I F M ++N+ +++ MI
Sbjct: 338 YWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMI 397
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVS 309
G A +G A++LF M +PN F G +TACS H + G
Sbjct: 398 SGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD 457
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMP-VEPNGGVWGALLGACQIH 357
+ M+ + R G +E A M MP V+P W +++ A H
Sbjct: 458 STLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS--WNSMIAALGQH 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 191/442 (43%), Gaps = 97/442 (21%)
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
SL + +H ++ GF ++ N +I +Y K +RK+FDE+P+ DV++ T LI A
Sbjct: 30 SLARTVHGH-VIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITA 88
Query: 129 YANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y+ G+++ A +FNE PL +D V + AM+TGY AIE F M++A + D
Sbjct: 89 YSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDF 148
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCG-------- 236
T V+SA +I Y C G+ FG V +AL+ +Y KC
Sbjct: 149 TFASVLSAST---LIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSS 205
Query: 237 -SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+ A ++F M +RN F ++++I G+ +G A ++ M T+ G+ + ++
Sbjct: 206 SLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTM----TEQPGIAWNAMI 261
Query: 296 TACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLG 352
+ H GL E+AL + KM V+ + + +++
Sbjct: 262 SGYLHHGL------------------------FEDALTLFRKMRLLGVQVDESTYTSVIS 297
Query: 353 AC----------QIHRNPEIAQIAANHLFELEPDK-----IGNYIILSNIYASAGMWDDV 397
AC Q+H A I N EL PD+ +GN +I +Y G D
Sbjct: 298 ACADGGFFLLGKQVH-----AYILKN---ELNPDRDFLLSVGNTLI--TLYWKYGKVDGA 347
Query: 398 SRVRRLLKMTGLKKNPGYSW---LEG--DRGVIHEFRAGDLTHPNSTEI----------Q 442
++ + + + +W L G + G + E ++ P + Q
Sbjct: 348 RKIFYEMPVKDI-----ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQ 402
Query: 443 QALGD----LLDRLQADGYQPN 460
G+ L ++++ DGY+PN
Sbjct: 403 NGFGEQALKLFNQMKLDGYEPN 424
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/561 (40%), Positives = 330/561 (58%), Gaps = 53/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC--T 63
R VF++ + + ++W AL R L G D + LY M G+ FT + L KAC +
Sbjct: 124 RKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVAS 183
Query: 64 EVLDVSL--GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
E L L G++IHA IL G+ + ++V T++ MY + GC
Sbjct: 184 ECLVSFLQKGKEIHAH-ILRHGYGAHVHVMTTLMDMYAR---FGC--------------- 224
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
V+YA+ +F+E+P+K+ V+W+AM+ Y +N KP EA+E F M
Sbjct: 225 -----VSYAS--------AVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTH 271
Query: 182 ET--DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ + VT+V V+ ACA ++ + G I V+ SALI MY++CG ++
Sbjct: 272 DSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVI--SALITMYARCGKLE 329
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
IF M +++V ++S+I + +HG AI++F +M+ P+ ++FI VL ACS
Sbjct: 330 SGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL K +G+ PS +HYACMVDLLGRA L+EA K++E + +EP VW
Sbjct: 390 HTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVW 449
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LLGAC+IH + E+A+ A+ LF+LEP GNY++L++IYA A MWD+V RV++LL
Sbjct: 450 GSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSR 509
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L+K PG SW+E R I+ F + D +P ++ L +L + ++ GY P + VLYD
Sbjct: 510 ELQKVPGRSWIEVRRK-IYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYD 568
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK+RI++ HSEKLA+AFGL+ TS G T+RI KNLR+CEDCH S+ REI+
Sbjct: 569 LDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIM 628
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSCG+YW
Sbjct: 629 VRDLNRFHHFKDGVCSCGDYW 649
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 56/352 (15%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
LI+ QG+LK ++ L + E P T L + +S +H Q ++ G
Sbjct: 44 LIQSLCKQGNLKQALYL---LSHES-NPTQQTCELLILSAARRNSLSDALDVH-QLLVDG 98
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF D ++ +I M+ + + +RKVFD+ +R + W L A A G
Sbjct: 99 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAG--------- 149
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC-AQLGVI 201
+ + +E + RM GV +D T ++ AC A ++
Sbjct: 150 ----------------------RGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLV 187
Query: 202 KYANWVCEIAEG---SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ EI G+G +V V + L+DMY++ G + A +F M +NV S+S+
Sbjct: 188 SFLQKGKEIHAHILRHGYGA--HVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSA 245
Query: 259 MILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS-----------HVGLKC 305
MI +A +G+ + A++LF +M+ ++ PN VT + VL AC+ H +
Sbjct: 246 MIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILR 305
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G+ + ++ + R G LE + ++M + + +W +L+ + +H
Sbjct: 306 RGLDSILPVISALITMYARCGKLESGQLIFDRMH-KKDVVLWNSLISSYGLH 356
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 37/250 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFK 60
S+ VF+++ KN W+A+I Y G +++ L+ M P S T+ ++ +
Sbjct: 226 SYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQ 285
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + G+ IHA IL G S L V + +I MY +CG L + +FD M ++DVV
Sbjct: 286 ACAAFAALEQGKLIHAY-ILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVV 344
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
W LI +Y + GY R+AI+ FE M G
Sbjct: 345 LWNSLISSYG--------------------------LHGY-----GRKAIKIFEEMIDHG 373
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+++ + V+ AC+ G+++ + E + + G P +V + ++D+ + +D
Sbjct: 374 FSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQP--SVEHYACMVDLLGRANRLD 431
Query: 240 DAYRIFVGMK 249
+A +I ++
Sbjct: 432 EAAKIIEDLR 441
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 328/553 (59%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ + W+ +I Y ++++ L+ MRR + P FT +++ ++C + +
Sbjct: 199 VFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIEN 258
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H +L G +++V N ++ +Y KCG L S K
Sbjct: 259 LQLGKQVHCH-VLKVGLDGNVFVSNALMDVYAKCGRLDNSMK------------------ 299
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
LF ELP +++V W M+ GYVQ+ +A+ ++ M V+ VT
Sbjct: 300 -------------LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVT 346
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA L ++ + ++ + + +VVVG+ALIDMY+KCGSI +A +F
Sbjct: 347 YSSVLRACASLAAMELGTQIHSLSLKTIYD--KDVVVGNALIDMYAKCGSIKNARLVFDM 404
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R+ S+++MI G++MHG A++ F M +TE PN +TF+ +L+ACS+ GL
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY CMV LLGR+G L++A+K++E++P+EPN VW ALLGAC
Sbjct: 465 QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACV 524
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH + ++ ++A + +++P +++LSNIYA W+ V+ VR+ +K G+KK PG
Sbjct: 525 IHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGL 584
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++G++H F GD +HP+ I L L + + GY P+L +VL DV D+EKKR
Sbjct: 585 SWIE-NQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKR 643
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LALAFGL+ T +RI+KNLRIC DCH + S+++ R+I++RD RFH
Sbjct: 644 HLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFH 703
Query: 536 HFQDGKCSCGNYW 548
HFQDG CSCG+YW
Sbjct: 704 HFQDGICSCGDYW 716
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 193/404 (47%), Gaps = 51/404 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+ + K+ WT ++ Y +DS+ L+ MR G P FT + + KAC +
Sbjct: 96 RQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGL 155
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S+G+ +H +L + DLYVG ++ +Y K G
Sbjct: 156 EAFSVGKSVHG-CVLKTCYEMDLYVGVGLLDLYTKFG----------------------- 191
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D +F E+P D + W+ M++ Y Q+ + REA+E F +M+ A V +
Sbjct: 192 --------DANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQ 243
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V+ +CA + ++ V C + + G NV V +AL+D+Y+KCG +D++ ++
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLK---VGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F+ + RN ++++MI+G+ G A+ L+ +M++ + + + VT+ VL AC+
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 300 HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G + + +S T + ++D+ + G ++ A ++V M E + W A++
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISG 419
Query: 354 CQIHRNPEIAQIAANHLFELE--PDKIGNYIILSNIYASAGMWD 395
+H A A + E E P+K+ ILS ++AG+ D
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC-SNAGLLD 462
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 152/348 (43%), Gaps = 46/348 (13%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N + LI+GY+ L + + L+ + REG F + + K V L +
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA I G S+ +VG +I Y CG + +R+ FD + +D+VSWT ++ YA
Sbjct: 64 HA-CIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA---- 118
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+N + +++++ F M+ G ++ T GV+ A
Sbjct: 119 ---------------------------ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA 151
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C L V + + ++ VG L+D+Y+K G +D R+F M + +V
Sbjct: 152 CIGLEAFSVGKSVHGCVLKTCYEM--DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVI 209
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYG 307
+S MI +A ++ A++LFG M + PN TF VL +C+ + + C+
Sbjct: 210 PWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHV 269
Query: 308 VSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ D ++D+ + G L+ ++K+ ++P N W ++
Sbjct: 270 LKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP-NRNEVTWNTMI 316
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 139/307 (45%), Gaps = 66/307 (21%)
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD---YVTLVGVISA--CAQLG 199
+P ++ V++ ++ GYVQ+ + E ++ F R+ G E + + T++ ++ + CA+L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
Y+ C G +N VG+ALID Y+ CGS++ A + F + +++ S++ M
Sbjct: 61 ---YSLHACIYK----LGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGM 113
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST------- 312
+ +A + R ++QLF +M PN TF GVL AC +GL+ + V S
Sbjct: 114 VACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC--IGLEAFSVGKSVHGCVLKT 171
Query: 313 ----DHY--ACMVDLLGRAGCLEEALKMVEKMP--------------------------- 339
D Y ++DL + G + L++ E+MP
Sbjct: 172 CYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELF 231
Query: 340 -------VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII---LSNIYA 389
V PN + ++L +C N ++ + H+ ++ D GN + L ++YA
Sbjct: 232 GQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLD--GNVFVSNALMDVYA 289
Query: 390 SAGMWDD 396
G D+
Sbjct: 290 KCGRLDN 296
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ + ++ W A+I GY + G + +++ + M+ P T ++ AC+
Sbjct: 399 RLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNA 458
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ +GQ + G + M+ + + G L + K+ +E+P E +V W
Sbjct: 459 GLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRA 518
Query: 125 LIVAYANNGDME 136
L+ A + D++
Sbjct: 519 LLGACVIHNDVD 530
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/557 (40%), Positives = 330/557 (59%), Gaps = 51/557 (9%)
Query: 6 RLVFEQVKY--KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE+ + K + AL+ GY+ +++ L+ M EG+ S TL L AC
Sbjct: 104 RKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACV 163
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+++ LG +H T L GF SD+ V N I MY+KCG + ++K
Sbjct: 164 SPINLELGSSLHCST-LKYGFDSDVSVVNCFITMYMKCGSVNYAQK-------------- 208
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF+E+P+K ++W AMV+GY QN +E + M GV
Sbjct: 209 -----------------LFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VTLVGV+S+CA LG + V + SGF +N + +ALI+MY++CG++ A
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGF--TSNPFLNNALINMYARCGNLTKAQA 309
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F GM +R + S++++I G+ MHG A+QLF +M+++ +P+G F+ VL+ACSH GL
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P +HY+CMVDLLGRAG L+EA ++E MP++P+G VWGALL
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N E+A++A + ELEP+ IG Y++LSNIY++A V R+R ++K LKK
Sbjct: 430 GACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKK 489
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+PG S++E +G +H F GD H S EI + L +L + + +P + + S++
Sbjct: 490 DPGCSYVE-LKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNK 546
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+ + HSEKLA+AFGLL T+ GA V I+KNLRICEDCHLF S+++ R++ VRD
Sbjct: 547 DGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDA 606
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 607 TRFHHFRNGSCSCKDYW 623
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 49/400 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R + ++SLY M R G P +FT K+C + LG Q H Q I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ-I 75
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G + +V +I MY K + +RKVF+E
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE-------------------------- 109
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
N K V + A+V+GYV N+K EA+ F +M GV + VTL+G+I AC
Sbjct: 110 ---NFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPI 166
Query: 200 VIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
++ + + C + +G ++V V + I MY KCGS++ A ++F M + + S+++
Sbjct: 167 NLELGSSLHCSTLK---YGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNA 223
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYG 307
M+ G+A +G A ++L+ +M P+ VT +GVL++C+++G ++ G
Sbjct: 224 MVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASG 283
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ + ++++ R G L +A + + MP E W A++G +H + EIA
Sbjct: 284 FTSNPFLNNALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLF 342
Query: 368 NHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+ +EPD +LS + AG+ D +++K
Sbjct: 343 KEMIRSGIEPDGTAFVCVLSAC-SHAGLTDQGLEYFKMMK 381
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ + +F+++ K W A++ GY G + + LY +M G+ P TL + +C
Sbjct: 204 NYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 263
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ S+G ++ + I GFTS+ ++ N +I MY +CG L ++ VFD MPER +VSW
Sbjct: 264 ANLGAQSVGHEVEFK-IQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 322
Query: 123 TELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
T +I Y +G E A LF E+ D A+ +++ + +EYF+ M+
Sbjct: 323 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK 381
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 325/555 (58%), Gaps = 45/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ W A+I GY+ G+ K+++ L+ M + + P T+ + A
Sbjct: 149 RNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARS 208
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q+H+ I GF S+L + N +I Y KCG
Sbjct: 209 GSIELGRQVHSW-IADHGFGSNLKIVNALIDFYSKCG----------------------- 244
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ME+A GLF L KD ++W ++ GY +EA+ F+ M +G +
Sbjct: 245 --------EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPND 296
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ ++ ACA LG I W+ + G N + ++LIDMYSKCG I+ A+++F
Sbjct: 297 VTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVF 356
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++ ++++MI GFAMHGRA+AA +F M K E KP+ +TF+G+L+ACSH G+
Sbjct: 357 NSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLD 416
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL A
Sbjct: 417 LGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N E+ + A +LF++EP+ G+Y++LSNIYA+AG W++V+R+R LL G+KK P
Sbjct: 477 CKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVP 536
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D V+HEF GD HP + EI L ++ LQ G+ P+ VL ++ +E K
Sbjct: 537 GCSSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFK 595
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AFGL++T P + I+KNLR+C +CH S++ REI+ RD R
Sbjct: 596 EGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 655
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 656 FHHFRDGVCSCNDYW 670
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 215/403 (53%), Gaps = 20/403 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W + RG+ L ++ LY M G+ P S+T L K+C ++
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G QIH + LG + DLYV ++I MYV+ L + KVFD RDVVS+T L+
Sbjct: 79 SKEGLQIHGHVLKLG-YELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVT 137
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G +ESA +F+E+P+KD V+W AM++GYV+ +EA+E F+ M V D T
Sbjct: 138 GYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDEST 197
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V VISA A+ G I+ V GFG +N+ + +ALID YSKCG ++ A +F+G
Sbjct: 198 MVTVISASARSGSIELGRQVHSWIADHGFG--SNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++ +I G+ A+ LF +M+++ PN VT + +L AC+H+G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ ++D+ + G +E A ++ M + + W A++
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMIFGF 374
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
+H N + E++PD I ++ L + + AGM D
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDI-TFVGLLSACSHAGMLD 416
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 321/556 (57%), Gaps = 57/556 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL F+Q+ K+ W +I G+ G + + L+ M PV ++S
Sbjct: 88 RLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVM------PVRNSVS--------- 132
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
N MI YV+ G L ++++F+ P R VV+WT +
Sbjct: 133 -------------------------WNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAM 167
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I + G +E A F E+P+K+ V W AM+ GY++N + ++ F+RM +G +
Sbjct: 168 ITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNP 227
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRI 244
+L V+ C+ L +K V ++ S P++ N+ G++L+ MY KCG ++DA+++
Sbjct: 228 SSLSSVLLGCSNLSALKLGKQVHQLICKS---PVSWNITAGTSLLSMYCKCGDLEDAWKL 284
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F+ M Q++V ++++MI G+A HG A+ LF M KP+ +TF+ VL+AC+H G
Sbjct: 285 FLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFV 344
Query: 303 ----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
++ YGV DHY C+VDLLGR G L EA+ +++KMP +P+ ++G LLG
Sbjct: 345 DLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLG 404
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH+N E+A+ AA +L L+P+ Y+ L+N+YA+ WD V+ VRR +K + K
Sbjct: 405 ACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKT 464
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYSW+E + V+HEFR+GD HP I + L +L +++ GY P+L L+DV +E+
Sbjct: 465 PGYSWIEV-KSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQ 523
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
KK+IL+ HSEKLA+A+GL+ G +R+ KNLR+C DCH S + GR I+VRD
Sbjct: 524 KKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTT 583
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G+CSCG+YW
Sbjct: 584 RFHHFRQGECSCGDYW 599
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 56/346 (16%)
Query: 85 TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN------------- 131
+S++ N +I +++ G L + +VF+ M + V+W ++ Y+N
Sbjct: 2 SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61
Query: 132 -------------------NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
N D+ESA F+++P+KD +W M++G+ QN +A E
Sbjct: 62 RIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAREL 121
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M + V+ +IS + G + A + E+A P+ +VV +A+I +
Sbjct: 122 FLVMPV----RNSVSWNAMISGYVESGDLDLAKQLFEVA------PVRSVVAWTAMITGF 171
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
K G I+ A + F M +N+ ++++MI G+ + +A ++LF MV++ +PN +
Sbjct: 172 MKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLS 231
Query: 293 GVLTACSHVGLKCYG--------VSPSTDHYACMVDLLG---RAGCLEEALKMVEKMPVE 341
VL CS++ G SP + + LL + G LE+A K+ MP +
Sbjct: 232 SVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP-Q 290
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILS 385
+ W A++ H E A + + + ++PD I +LS
Sbjct: 291 KDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLS 336
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 323/554 (58%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +++ WT++I GY D++ L+ M +G P FTLS+L K C +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA G S+++VG++++ MY +CG+LG + VFD+
Sbjct: 189 ASYNCGRQIHA-CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDK------------ 235
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
L K++V+W A++ GY + + EA+ F RMQ G
Sbjct: 236 -------------------LGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTE 276
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T ++S+C+ +G ++ W+ S + VG+ L+ MY+K GSI DA ++F
Sbjct: 277 FTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG--YVGNTLLHMYAKSGSIRDAEKVF 334
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ + +V S +SM++G+A HG A Q F +M++ +PN +TF+ VLTACSH L
Sbjct: 335 DKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD 394
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ Y + P HYA +VDLLGRAG L++A +E+MP+EP +WGALLGA
Sbjct: 395 EGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGAS 454
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA +FEL+P G + +L+NIYASAG W+DV++VR+++K +G+KK P
Sbjct: 455 KMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPA 514
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D+ HP +I + L +++ GY P+ VL V +EK+
Sbjct: 515 CSWVEVENSV-HVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKE 573
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLAL+F LL T PG+T+RIMKN+R+C DCH + S V+ REI+VRD RF
Sbjct: 574 LNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRF 633
Query: 535 HHFQDGKCSCGNYW 548
HHF DG CSCG+YW
Sbjct: 634 HHFCDGFCSCGDYW 647
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
+ P + L K CT++ + G+ +H +L F DL + N+++ MY +C
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFH-VLNSNFKHDLVIQNSLLFMYARC----- 122
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
G +E A LF+E+P +D V+WT+M+TGY QN +
Sbjct: 123 --------------------------GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRA 156
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
+A+ F RM G E + TL ++ C + + A +G +NV VGS
Sbjct: 157 SDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQI--HACCWKYGCHSNVFVGS 214
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+L+DMY++CG + +A +F + +N S++++I G+A G A+ LF M + +P
Sbjct: 215 SLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRP 274
Query: 287 NGVTFIGVLTACSHVG 302
T+ +L++CS +G
Sbjct: 275 TEFTYSALLSSCSSMG 290
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/555 (37%), Positives = 323/555 (58%), Gaps = 28/555 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACTEV 65
+F ++ ++ W ++ GY +G + ++ L+ + P+ FT +A+ +
Sbjct: 284 MFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF------DVAPIRDVFTWTAIVSGYAQN 337
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G A+ + + N M+ YV+ + ++++FD MP R+V SW +
Sbjct: 338 -----GMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTM 392
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA G ++ A +F +P KD V+W AM+ Y Q E ++ F+ M G +
Sbjct: 393 LTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNR 452
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+S CA + ++ + +G+G VG+AL+ MY KCGS+++A+ F
Sbjct: 453 SAFACVLSTCADIAALECGMQLHSRLIKAGYGV--GCFVGNALLAMYFKCGSMEEAHSAF 510
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M++R+V S+++MI G+A HG A+++F M KT TKP+ +T +GVL ACSH GL
Sbjct: 511 EEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVE 570
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +GV+ +HY CM+DLLGRAG L+EA+ +++ MP EP+ +WGALLGA
Sbjct: 571 KGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGA 630
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IHRN E+ + AA +FELEP+ G Y++LSNIYAS+G W DV ++R ++ G+KK P
Sbjct: 631 SRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVP 690
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+SW+E V H F GD HP +I L DL R++ GY VL+DV +EEK
Sbjct: 691 GFSWIEVQNKV-HTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEK 749
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+A+G+L PG +R++KNLR+C DCH S + GR I++RD+ R
Sbjct: 750 EHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNR 809
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 810 FHHFRDGSCSCGDYW 824
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 159/341 (46%), Gaps = 36/341 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA---CTE 64
+F + ++ + ++ GY G L ++S + S+ R P SF+ + L A +
Sbjct: 129 LFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PDSFSYNTLLHALGVSSS 184
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV + + D N MI + G + +R FD PE+D VSW
Sbjct: 185 LADV--------RALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNG 236
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ AY NG ++ A LF+ D ++W A++ GYVQ ++ EA + F +M + D
Sbjct: 237 MLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMP----QRD 292
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+ ++S A+ G + A + ++A PI +V +A++ Y++ G +++A R+
Sbjct: 293 VVSWNTMVSGYARRGDMAEARRLFDVA------PIRDVFTWTAIVSGYAQNGMLEEAKRV 346
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +N S+++M+ + A +LF M N ++ +LT + G+
Sbjct: 347 FDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR----NVASWNTMLTGYAQAGML 402
Query: 304 ----KCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM 338
+G+ P D +A M+ + G EE L++ ++M
Sbjct: 403 DEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + K+ W A++ Y G ++++ L+ M R G + + C ++
Sbjct: 406 RAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADI 465
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+H++ ++ G+ +VGN ++ MY KCG + + F+EM ERDVVSW +
Sbjct: 466 AALECGMQLHSR-LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTM 524
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G F +EA+E F+ M+ + D
Sbjct: 525 IAGYARHG--------FG-----------------------KEALEVFDTMRKTSTKPDD 553
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+TLVGV++AC+ G++ K ++ + FG + +ID+ + G +D+A +
Sbjct: 554 ITLVGVLAACSHSGLVEKGISYFYSMHR--DFGVATKPEHYTCMIDLLGRAGRLDEAVNL 611
Query: 245 FVGM 248
M
Sbjct: 612 MKDM 615
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 136/317 (42%), Gaps = 27/317 (8%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N I +++ G + + ++F MP R ++ ++ YA NG + A F +P D
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
++ ++ ++ + F+ M D V+ +IS+ A G++ A ++A
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEMPV----KDSVSYNVMISSHANHGLVSLARHYFDLA 226
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P + V + ++ Y + G I +A +F + + S+++++ G+ +
Sbjct: 227 ------PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEE 280
Query: 272 AIQLFG-----DMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD--HYACMVDLLGR 324
A ++F D+V T +G G + + + V+P D + +V +
Sbjct: 281 AQKMFNKMPQRDVVSWNTMVSGYARRGDMAEAR----RLFDVAPIRDVFTWTAIVSGYAQ 336
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP-DKIGNYII 383
G LEEA ++ + MP + N W A++ A R E A LF+ P + ++
Sbjct: 337 NGMLEEAKRVFDAMP-DKNAVSWNAMMAAYVQRRMME----EAKELFDAMPCRNVASWNT 391
Query: 384 LSNIYASAGMWDDVSRV 400
+ YA AGM D+ +
Sbjct: 392 MLTGYAQAGMLDEARAI 408
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 33/160 (20%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P V+ + I + + G + DA R+F M +R+ +Y++M+ G+A +GR A+ F
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162
Query: 278 DMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
+ + P + Y ++ LG + L + + ++
Sbjct: 163 SIPR----------------------------PDSFSYNTLLHALGVSSSLADVRALFDE 194
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
MPV+ + + ++ + H N + + A H F+L P+K
Sbjct: 195 MPVK-DSVSYNVMISS---HANHGLVSL-ARHYFDLAPEK 229
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 340/556 (61%), Gaps = 20/556 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVLD 67
FEQ+ ++ W A+I GY G ++++ ++ M + P FTL++ AC + +
Sbjct: 234 FEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLEN 293
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTEL 125
+ LG+QIHA I+ F + VGN +I MY K G + ++K+ ++ + DV+++T L
Sbjct: 294 LKLGKQIHAH-IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTAL 352
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y GD+ A +F+ L ++D VAWTAM+ GYVQN ++A+E F M G + +
Sbjct: 353 LDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNN 412
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++S + L + + + A SG ++V V +ALI MY+K GSI+DA +F
Sbjct: 413 YTLATMLSVSSSLASLDHGRQIHASATRSGNA--SSVSVSNALITMYAKSGSINDARWVF 470
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
+ +R+ +++SMI+ A HG A+ LF M++ KP+ +T++GVL+AC+HVGL
Sbjct: 471 NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLV 530
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + P+ HYACM+DL GRAG L+EA +E MP+EP+ WG+LL
Sbjct: 531 EQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C++H+N E+A++AA L +EP+ G Y L+N+Y++ G W++ + +R+ +K G+KK+
Sbjct: 591 SCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKD 650
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+SW++ + +H F D HP I + + + ++ G+ P+ SVL+D+ +E
Sbjct: 651 QGFSWVQ-IKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEEL 709
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSEKLA+AFGL+ T T+RIMKNLR+C DCH + S+++GREI+VRD
Sbjct: 710 KEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 769
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 770 RFHHFKNGLCSCRDYW 785
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 199/423 (47%), Gaps = 46/423 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ + WTA+I GY G +++I ++ M + + P FTL+ + +C V
Sbjct: 101 VFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVEC 160
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+++H+ ++ G +S + V N+++ MY K G ++ VFD M + SW +I
Sbjct: 161 LGIGRKVHS-FVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMIS 219
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYV 186
++ +G ++ A F ++ +D V+W AM++GY Q+ REA++ F +M + + D
Sbjct: 220 SHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKF 279
Query: 187 TLVGVISACAQLGVIKYANWVCE---IAEGSGFGPINN---------------------- 221
TL +SACA L +K + E FG + N
Sbjct: 280 TLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQS 339
Query: 222 ------VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
V+ +AL+D Y K G I+ A RIF ++ R+V ++++MI+G+ +G A++L
Sbjct: 340 MISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMEL 399
Query: 276 FGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGR 324
F M+K KPN T +L+ S H G + S ++ + +
Sbjct: 400 FRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAK 459
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYI 382
+G + +A + + + + W +++ A H E A + E ++PD I
Sbjct: 460 SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVG 519
Query: 383 ILS 385
+LS
Sbjct: 520 VLS 522
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 46/314 (14%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D G+ IHA+ I+ G +++ N ++ Y K GF+ + +VFDEMP + V SW ++
Sbjct: 28 DPFTGKSIHAR-IIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIIL 86
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA G +E A +F E+P D V+WTAM+ GY Q + AI F M V
Sbjct: 87 SGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQF 146
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS--------- 237
TL V+++CA + + V G + V ++L++MY+K G
Sbjct: 147 TLTNVLASCAAVECLGIGRKVHSFVVKHGLSSY--ISVANSLLNMYAKSGDPVTAKIVFD 204
Query: 238 ----------------------IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
+D A F M +R+V S+++MI G+ HG A+ +
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264
Query: 276 FGDMV-KTETKPNGVTFIGVLTACSHV-------GLKCYGVSPSTDHYA----CMVDLLG 323
F M+ + +KP+ T L+AC+++ + + + D + ++ +
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324
Query: 324 RAGCLEEALKMVEK 337
++G +E A K++E+
Sbjct: 325 KSGGVEIAQKIIEQ 338
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 131/269 (48%), Gaps = 35/269 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ ++ ++ WTA+I GY+ G +D++ L+ SM +EG P ++TL+ + + +
Sbjct: 366 RRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSL 425
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ G+QIHA G S + V N +I MY K G + +R VF+ + +RD ++WT
Sbjct: 426 ASLDHGRQIHASATRSGN-ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTS 484
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I+A A +G E EA+ FERM G++ D
Sbjct: 485 MIIALAQHGLGE-------------------------------EALTLFERMLENGIKPD 513
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
++T VGV+SAC +G+++ + + + I + +ID++ + G + +A+
Sbjct: 514 HITYVGVLSACTHVGLVEQGRSYYNLMQ-NAHKIIPTPSHYACMIDLFGRAGLLQEAHAF 572
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
M + +V ++ S++ +H A
Sbjct: 573 IENMPIEPDVIAWGSLLASCKVHKNVELA 601
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 324/554 (58%), Gaps = 47/554 (8%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VFE + FLW +IRG+ G S+ LY M +G+ P F K+C +
Sbjct: 773 IVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLS 832
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ G+ IH Q ++ G ++DL+V ++ MY KCG
Sbjct: 833 DLQRGKVIH-QHLVCCGCSNDLFVDAALVDMYAKCG------------------------ 867
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D+E+A +F+++ ++D V+WT+M++GY N E + +F+ M+ +GV + V
Sbjct: 868 -------DIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRV 920
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+++ V+ AC LG ++ W +GF +++V +A++DMYSKCGS+D A +F
Sbjct: 921 SILSVLLACGNLGALRKGEWFHSYVIQTGFE--FDILVATAIMDMYSKCGSLDLARCLFD 978
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+++ +S+MI + +HG AI LF MVK +P+ VTF VL+ACSH GL
Sbjct: 979 ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + ++ +YACMVDLLGRAG L EA+ ++E MPVEP+ +WG+LLGAC
Sbjct: 1039 GKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N ++A+ A+HLF L+P G +++LSNIYA+ W++V +VR+++ G K G
Sbjct: 1099 RIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQG 1158
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
+S +E D V H+F GD +HP ++ L +L ++ GY P VL+D+ +E K+
Sbjct: 1159 FSLVEYDNQV-HKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKE 1217
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSE+LA+AFGL+ TSPG T+RI KNLRIC DCH + S+++ R I+VRD RF
Sbjct: 1218 AALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRF 1277
Query: 535 HHFQDGKCSCGNYW 548
H F+DG CSCG+YW
Sbjct: 1278 HRFEDGVCSCGDYW 1291
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 292/547 (53%), Gaps = 92/547 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG---IGPVSFTLSALFKACTE 64
VFE+ + + LWT+++ GY +++++L+ M + PV TL ++ AC +
Sbjct: 161 VFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPV--TLVSVVSACAQ 218
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+L+V G +H ++ F DL + N+++ +Y K G + +F +MPE+DV+SW+
Sbjct: 219 LLNVKAGSCVHG-LVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWST 277
Query: 125 LIVAYANNGDMESAGGLFNELPLK----------------------------DKVA-W-- 153
+I YANN A LF+E+ K K+A W
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337
Query: 154 --------TAMVTGYVQNAKPREAIEYFERMQ-------------YA------------- 179
TA++ Y++ + P EA++ F+R+ YA
Sbjct: 338 FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFR 397
Query: 180 -----GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
G++ D V +V +++A ++LG+ + A + SGF +NV VG++LI++YSK
Sbjct: 398 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN--SNVFVGASLIELYSK 455
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIG 293
CGS+ DA ++F GM R+V +SSMI + +HGR A+++F MVK T +PN VTF+
Sbjct: 456 CGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+L+ACSH GL Y + P ++H+ MVDLLGR G L +A+ ++ +MP+
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
VWGALLGAC+IH N E+ + AA +LF L+P G YI+LSNIYA G WD+V+ +R
Sbjct: 576 AGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR 635
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
+K GLKK G S +E RG +H F A D HP+S +I + L L ++ + Y P+L
Sbjct: 636 TRIKERGLKKMFGQSMVEV-RGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDL 694
Query: 462 RSVLYDV 468
+L+D
Sbjct: 695 DFLLHDT 701
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 172/362 (47%), Gaps = 53/362 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
R VF++ + N LW + +R Y + ++++ L+ M G P +FT+ KAC
Sbjct: 56 RKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAG 115
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + LG+ IH SD++VG+ ++ +Y KCG +G + KV
Sbjct: 116 LRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKV-------------- 161
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VET 183
F E D V WT+MVTGY QN P EA+ F +M V
Sbjct: 162 -----------------FEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVL 204
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIA---EGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D VTLV V+SACAQL +K + V + E G P+ N +L+++Y+K G
Sbjct: 205 DPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN-----SLLNLYAKTGCEKI 259
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
A +F M +++V S+S+MI +A + A+ A+ LF +M++ +PN VT + L AC+
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 300 ----HVGLKCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G K + G ++D+ + C +EA+ + +++P + + W A
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVA 378
Query: 350 LL 351
LL
Sbjct: 379 LL 380
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+++ ++ WT++I GY G+ +++ + MR G+ P ++ ++ AC +
Sbjct: 873 RLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNL 932
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ H+ I GF D+ V ++ MY KCG L +R +FDE +D+V W+ +
Sbjct: 933 GALRKGEWFHSYVIQT-GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM 991
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +Y +G R+AI+ F++M AGV +
Sbjct: 992 IASYGIHG-------------------------------HGRKAIDLFDQMVKAGVRPSH 1020
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V+SAC+ G+++ ++ F + + ++D+ + G + +A +
Sbjct: 1021 VTFTCVLSACSHSGLLEEGKMYFQLMT-EEFVIARKLSNYACMVDLLGRAGQLSEAVDLI 1079
Query: 246 VGM 248
M
Sbjct: 1080 ENM 1082
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
K+F + D T+ + Y + +++A +F ++P W M+ G+ + +
Sbjct: 742 KIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLS 801
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVV 223
++E + +M G++ D + +CA Q G + + + VC G N++
Sbjct: 802 SLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVC-------CGCSNDLF 854
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
V +AL+DMY+KCG I+ A +F M R++ S++SMI G+A +G + F M +
Sbjct: 855 VDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG 914
Query: 284 TKPNGVTFIGVLTACSHVG 302
PN V+ + VL AC ++G
Sbjct: 915 VIPNRVSILSVLLACGNLG 933
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L LF+AC VS Q+H+Q + G D + + +Y KC L +RKV
Sbjct: 6 VLVDLFQACNNGRSVS---QLHSQ-VFKTGILHDTFFATKLNSLYAKCASLQAARKV--- 58
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
F+E P + W + + Y + + E + F
Sbjct: 59 ----------------------------FDETPHPNVHLWNSTLRSYCREKQWEETLRLF 90
Query: 174 ERMQ-YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV-----VGSA 227
M AG D T+ + ACA L +++ + GF N+ + VGSA
Sbjct: 91 HLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI------HGFAKKNDEIGSDMFVGSA 144
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKP 286
L+++YSKCG + +A ++F ++ + ++SM+ G+ + A+ LF MV +
Sbjct: 145 LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVL 204
Query: 287 NGVTFIGVLTACSHV-----GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMV 335
+ VT + V++AC+ + G +G+ + +++L + GC + A +
Sbjct: 205 DPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLF 264
Query: 336 EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL-----EPDKI 378
KMP E + W ++ AC + N E A A N E+ EP+ +
Sbjct: 265 SKMP-EKDVISWSTMI-AC--YANNEAANEALNLFHEMIEKRFEPNSV 308
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/553 (38%), Positives = 321/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN WT +I G I G ++++ L+ + G+ P F + + +AC + D
Sbjct: 161 VFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGD 220
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I + + G + +++V +++ MY KC
Sbjct: 221 LESGRWID-RCMRECGLSRNVFVATSLVDMYTKC-------------------------- 253
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G ME A +F+ + KD V W+AM+ GY N PREAIE F M+ V D
Sbjct: 254 -----GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VG +S+CA LG ++ NW + F ++N V+G++LID Y+KCGS+++A ++
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEF--LSNPVLGTSLIDFYAKCGSMEEALGVYKM 366
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+++ ++++I G AM+G+ AA +FG M K PN TF+G+L C+H GL
Sbjct: 367 MKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDG 426
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ V+P+ +HY CMVDLL RAG L+EA +++ MP++ N VWG+LLG C+
Sbjct: 427 RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+HR ++A+ L ELEP G+Y++LSNIY+++ WD+ ++R + G++K PGY
Sbjct: 487 LHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGY 546
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D GV+HEF GD +HP S +I + L L L+ GY P VL+DV +EEK+
Sbjct: 547 SWVEVD-GVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEH 605
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AF L++T +R++KNLR+C DCH + S+V GREIV+RDN RFH
Sbjct: 606 FLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFH 665
Query: 536 HFQDGKCSCGNYW 548
F DG CSC +YW
Sbjct: 666 CFSDGACSCRDYW 678
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 184/360 (51%), Gaps = 47/360 (13%)
Query: 4 FPRLVFEQVKYK-NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+P LVF + N FL+ +IRG + + +++ LY SM + I P SFT S + KAC
Sbjct: 55 YPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKAC 114
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ LG IH+ + GF D++V ++ Y KCGFL RD
Sbjct: 115 ARLNLFHLGVMIHS-LVFKTGFDCDVFVKTNVVCFYSKCGFL------------RD---- 157
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A +F+++ +K+ V+WT M+ G ++ K REA++ F + +G+
Sbjct: 158 ---------------AWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLR 202
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +V V+ ACA+LG ++ W+ G NV V ++L+DMY+KCGS+++A
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS--RNVFVATSLVDMYTKCGSMEEAR 260
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F GM ++++ +S+MI G+A +G AI+LF +M K +P+ +G L++C+ +G
Sbjct: 261 FVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLG 320
Query: 303 -LKCYGVSPSTDHY----------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L+ + +Y ++D + G +EEAL V KM E + V+ A++
Sbjct: 321 ALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALG-VYKMMKEKDRVVFNAVI 379
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/564 (37%), Positives = 325/564 (57%), Gaps = 22/564 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ +++ W +I Y G + ++ L+ M+ + P L + AC
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + I+ + ++ D ++ ++ MY G + +R+ F +M R++
Sbjct: 223 GRTGNMRYNRAIY-EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T ++ Y+ G ++ A +F++ KD V WT M++ YV++ P+EA+ FE M +G++
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D V++ VISACA LG++ A WV +G + + + +ALI+MY+KCG +D
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE--SELSINNALINMYAKCGGLDATR 399
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +RNV S+SSMI +MHG A A+ LF M + +PN VTF+GVL CSH G
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L Y ++P +HY CMVDL GRA L EAL+++E MPV N +WG+L
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
+ AC+IH E+ + AA + ELEPD G +++SNIYA W+DV +RR+++ +
Sbjct: 520 MSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVF 579
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G S ++ + G HEF GD H S EI L +++ +L+ GY P+ SVL DV +
Sbjct: 580 KEKGLSRIDQN-GKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPG------ATVRIMKNLRICEDCHLFMCGASQVIGR 524
EEKK +++ HSEKLAL FGL+ +RI+KNLR+CEDCHLF S+V R
Sbjct: 639 EEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYER 698
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI+VRD RFH +++G CSC +YW
Sbjct: 699 EIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 158/357 (44%), Gaps = 28/357 (7%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
NPFL R + +I Y +R G F+ + KA ++V + G ++H
Sbjct: 80 NPFL-----RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ D +V + MY CG + +R VFDEM RDVV+W +I Y G +
Sbjct: 135 GVAFKIATLC-DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 136 ESAGGLFNELP----LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ A LF E+ + D++ +V+ + R +E + V D L +
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
++ A G + A E + N+ V +A++ YSKCG +DDA IF +++
Sbjct: 254 VTMYAGAGCMDMAR------EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------- 302
++ +++MI + A+++F +M + KP+ V+ V++AC+++G
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 303 --LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G+ ++++ + G L+ + EKMP N W +++ A +H
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 340/572 (59%), Gaps = 35/572 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEV 65
VF+Q+ +N F W +IR Q D++ ++C M E + P FT ++ KAC +
Sbjct: 71 VFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVM 130
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF-------------- 111
++ G+Q+H +L G D +V ++ MYV CG + + +F
Sbjct: 131 ARLAEGKQVHG-LLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLV 189
Query: 112 -DEM-PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
DE E +VV ++ YA G++++A LF+ + + V+W M++GY QN +EA
Sbjct: 190 RDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEA 249
Query: 170 IEYFERM-QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
IE F RM Q V + VTLV V+ A ++LGV++ WV AE + I++V+ GSAL
Sbjct: 250 IEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIR-IDDVL-GSAL 307
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+DMY+KCGSI+ A ++F + Q NV +++++I G AMHG+A+ M K P+
Sbjct: 308 VDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSD 367
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
VT+I +L+ACSH GL G+ P +HY CMVDLLGRAG LEEA +++
Sbjct: 368 VTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELIL 427
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
MP++P+ +W ALLGA ++H+N +I AA L ++ P G Y+ LSN+YAS+G WD
Sbjct: 428 NMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDG 487
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
V+ VR ++K ++K+PG SW+E D GVIHEF D +H + +I L ++ ++L +G
Sbjct: 488 VAAVRLMMKDMDIRKDPGCSWIEID-GVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEG 546
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
+ P+ VL + ++ K+ +L HSEK+A+AFGL++T P + I+KNLRICEDCH M
Sbjct: 547 HMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMK 606
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ R+IV+RD RFHHF+ G CSC +YW
Sbjct: 607 LISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 111/248 (44%), Gaps = 36/248 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R +F+++ ++ W +I GY G K++I ++ M + G + P TL ++ A +
Sbjct: 219 RELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISR 278
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + LG+ +H D +G+ ++ MY KCG + + +VF+ +P+ +V++W
Sbjct: 279 LGVLELGKWVHLYA-EKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNA 337
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I A +G A +FN Y RM+ G+
Sbjct: 338 VIGGLAMHG---KANDIFN----------------------------YLSRMEKCGISPS 366
Query: 185 YVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT + ++SAC+ G++ ++ ++ G P + ++D+ + G +++A
Sbjct: 367 DVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKP--KIEHYGCMVDLLGRAGYLEEAEE 424
Query: 244 IFVGMKQR 251
+ + M +
Sbjct: 425 LILNMPMK 432
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 319/556 (57%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + K+ LW ALI G G +S+SL+C MR+EG TL+A+ K+ +
Sbjct: 360 RKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASL 419
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S Q+HA +G F SD +V N +I Y KC L + KVF+E +++
Sbjct: 420 EAISDTTQVHALAEKIG-FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNII----- 473
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A+T+M+T Q +AI+ F M G+E D
Sbjct: 474 --------------------------AFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDP 507
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L +++ACA L + V F + +V G+AL+ Y+KCGSI+DA F
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRKF--MTDVFAGNALVYTYAKCGSIEDADLAF 565
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+ + V S+S+MI G A HG A+ +F MV PN +T VL AC+H GL
Sbjct: 566 SGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVD 625
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+ + +HY+CM+DLLGRAG L++A+++V MP E N VWGALL A
Sbjct: 626 EAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++HR+PE+ ++AA LF LEP+K G +++L+N YASAGMWD+V++VR+L+K + +KK P
Sbjct: 686 SRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEP 745
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
SW+E DR +H F GD +HP + +I L +L D + GY PNL L+DV E
Sbjct: 746 AMSWVELKDR--VHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSE 803
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSE+LA+AF L++T GA +R+ KNLRIC DCH+ S+++ REI++RD
Sbjct: 804 KELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDIN 863
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF DG CSCG+YW
Sbjct: 864 RFHHFSDGACSCGDYW 879
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 52/364 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++ W++L+ Y +++++ + +MR G+ F L + K
Sbjct: 57 RRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAP-- 114
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
D LG Q+HA + G + D++V N ++ MY GF+ +R+VFDE +R+ VSW
Sbjct: 115 -DAGLGVQVHAVAVST-GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSW-- 170
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
NG M++ +V+N + +A+E F M ++GV +
Sbjct: 171 -------NG----------------------MMSAFVKNDRCSDAVELFGEMVWSGVRPN 201
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V++AC ++ V + +G+ +V +AL+DMYSK G I A +
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD--KDVFTANALVDMYSKLGDIHMAALV 259
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV--- 301
F + + +V S+++ I G +HG A++L M + PN T +L AC+
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAG 319
Query: 302 ---------GLKCYGVSPSTDHY-ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + S D+ +VD+ + G L++A K+ E +P + +W AL+
Sbjct: 320 AFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALI 378
Query: 352 GACQ 355
C
Sbjct: 379 SGCS 382
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 62/321 (19%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTI---LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
++S L + LG IHA + LL F N ++ Y KC G +R+V
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR------NHLLSFYSKCRLPGSARRV 59
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FDE P+ VSW+ L+ AY+N NA PREA+
Sbjct: 60 FDETPDPCHVSWSSLVTAYSN-------------------------------NALPREAL 88
Query: 171 EYFERMQYAGVETDYVTLVGVISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
F M+ GV + L V+ A LGV +A +A +G ++ V +AL
Sbjct: 89 AAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHA-----VAVSTGLS--GDIFVANAL 141
Query: 229 IDMYSKCGSIDDAYRIF-VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
+ MY G +D+A R+F + RN S++ M+ F + R A++LFG+MV + +PN
Sbjct: 142 VAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPN 201
Query: 288 GVTFIGVLTACS-----HVGLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVE 336
F V+ AC+ G K + + T + +VD+ + G + A +
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFG 261
Query: 337 KMPVEPNGGVWGALLGACQIH 357
K+P + + W A + C +H
Sbjct: 262 KVP-KTDVVSWNAFISGCVLH 281
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 42/304 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D R+ E + +N W ++ ++ D++ L+ M G+ P F S +
Sbjct: 151 VDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVN 210
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT D+ G+++HA ++ G+ D++ N ++ MY K
Sbjct: 211 ACTGSRDLEAGRKVHAM-VVRTGYDKDVFTANALVDMYSKL------------------- 250
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
GD+ A +F ++P D V+W A ++G V + + A+E +M+ +G
Sbjct: 251 ------------GDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCG 236
+ + TL ++ + A + GF ++ +G AL+DMY+K G
Sbjct: 299 LVPNVFTLSSIL----KACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA-AIQLFGDMVKTETKPNGVTFIGVL 295
+DDA ++F + ++++ ++++I G + HG H ++ LF M K + N T VL
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCS-HGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Query: 296 TACS 299
+ +
Sbjct: 414 KSTA 417
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 328/555 (59%), Gaps = 57/555 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCS--MRREGIGPVSFTLSALFKACTEV 65
+F+++ +N WT +I Y L D +L C M REG+ P FT S++ +AC +
Sbjct: 112 LFDEMPERNVVSWTTMISAY--SNKLNDK-ALKCLILMFREGVRPNMFTYSSVLRACDGL 168
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +Q+H I+ G SD++V + +I +Y K W+
Sbjct: 169 PNL---RQLHC-GIIKTGLESDVFVRSALIDVYSK---------------------WS-- 201
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+++A G+F+E+P +D V W +++ G+ QN+ EA+ F+RM+ AG D
Sbjct: 202 --------DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQ 253
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL V+ AC L +++ V ++++ +ALIDMY KCGS++DA F
Sbjct: 254 ATLTSVLRACTGLALLELGRQV----HVHVLKFDQDLILNNALIDMYCKCGSLEDANSAF 309
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++V S+S+M+ G A +G + A++LF M ++ ++PN +T +GVL ACSH GL
Sbjct: 310 SRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVE 369
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +GV P +HY C++DLLGRAG L+EA+K++ +M EP+ W LLGA
Sbjct: 370 KGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++HRN ++A AA + ELEP+ G YI+LSNIYA+ W+DV+ VR+ + G++K P
Sbjct: 430 CRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTP 489
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E D+ IH F GD +HP EI Q L DL++R+ GY P+ VL D+ E+K
Sbjct: 490 GCSWIEVDKQ-IHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQK 548
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+ FGL+ S TVRI KNLRIC DCH+F S++ R IV+RD +R
Sbjct: 549 EDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIR 608
Query: 534 FHHFQDGKCSCGNYW 548
+HHFQDG CSCG+YW
Sbjct: 609 YHHFQDGVCSCGDYW 623
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 334/556 (60%), Gaps = 20/556 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKACTEVLD 67
FEQ+ ++ W ++I G+ +G+ ++ ++ M R+ + P FTL+++ AC +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD--VVSWTEL 125
+ +G+QIH+ I+ GF V N +I MY +CG + +R++ ++ +D + +T L
Sbjct: 295 LCIGKQIHSH-IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y GDM A +F L +D VAWTAM+ GY Q+ EAI F M G +
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++S + L + + + A SG I +V V +ALI MY+K G+I A R F
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSG--EIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
++ +R+ S++SMI+ A HG A A++LF M+ +P+ +T++GV +AC+H GL
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G + P+ HYACMVDL GRAG L+EA + +EKMP+EP+ WG+LL
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H+N ++ ++AA L LEP+ G Y L+N+Y++ G W++ +++R+ +K +KK
Sbjct: 592 ACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE 651
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+SW+E V H F D THP EI + + D ++ GY P+ SVL+D+ +E
Sbjct: 652 QGFSWIEVKHKV-HVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEV 710
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSEKLA+AFGL++T T+RIMKNLR+C DCH + S+++GREI+VRD
Sbjct: 711 KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTT 770
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 771 RFHHFKDGFCSCRDYW 786
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 195/417 (46%), Gaps = 50/417 (11%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+Q+ ++ WT +I GY G +I + M +EGI P FTL+ + + +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+++H+ + LG ++ V N+++ MY KCG ++ VFD M RD+ SW +I
Sbjct: 163 ETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYVT 187
+ G M+ A F ++ +D V W +M++G+ Q A++ F +M + + + D T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR---- 243
L V+SACA L + + +GF I+ +V+ +ALI MYS+CG ++ A R
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGF-DISGIVL-NALISMYSRCGGVETARRLIEQ 339
Query: 244 -----------------------------IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
IFV +K R+V ++++MI+G+ HG AI
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------VSPSTDHYA-----CMVDLLG 323
LF MV +PN T +L+ S + +G S + Y+ ++ +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA-QIAANHLFE-LEPDKI 378
+AG + A + + + E + W +++ A H + E A ++ L E L PD I
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 54/340 (15%)
Query: 49 GPVSFTLSALFKACTEVLDVSL--------GQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
PV +LS L + CT +L S+ Q +H + ++ G +Y+ N ++ +Y K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCR-VIKSGLMFSVYLMNNLMNVYSK 61
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
G+ +RK+FDEMP R SW ++ AY+ GDM+S F++LP +D V+WT M+ GY
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
+ +AI M G+E TL V+++ A ++ V G
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI--VKLGLRG 179
Query: 221 NVVVGSALIDMYSKC-------------------------------GSIDDAYRIFVGMK 249
NV V ++L++MY+KC G +D A F M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGLKCYG- 307
+R++ +++SMI GF G A+ +F M++ P+ T VL+AC+++ C G
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 308 ------VSPSTDHYA----CMVDLLGRAGCLEEALKMVEK 337
V+ D ++ + R G +E A +++E+
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 35/261 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F +K ++ WTA+I GY G ++I+L+ SM G P S+TL+A+ + +
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
+S G+QIH + G S + V N +I MY K G + + + FD + ERD VSWT +I
Sbjct: 429 LSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+A A +G E EA+E FE M G+ D++
Sbjct: 488 IALAQHGHAE-------------------------------EALELFETMLMEGLRPDHI 516
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T VGV SAC G++ ++ + I + + ++D++ + G + +A
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVD-KIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 247 GMK-QRNVFSYSSMILGFAMH 266
M + +V ++ S++ +H
Sbjct: 576 KMPIEPDVVTWGSLLSACRVH 596
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 325/556 (58%), Gaps = 19/556 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV-- 65
+F+ + ++ W ++ L + S+ + EG+ P F S+L KAC +
Sbjct: 65 LFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGS 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ V LG+Q+HA+ LL F D V ++++ MY K R VFD + E +SWT +
Sbjct: 125 VHVKLGKQLHAR-FLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAM 183
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TD 184
I YA +G A LF E P K+ AWTA+++G VQ+ +A+ F M+ GV D
Sbjct: 184 ISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIAD 243
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L V+ ACA V + V + G+ + + + +AL+DMY+KC + A I
Sbjct: 244 PLVLSSVVGACANSAVRELGKQVHCVVITLGYE--SCLFISNALVDMYAKCSDVVAAKYI 301
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M++++V S++S+I+G A HG A A+ L+ DMV KPN VTF+G++ ACSHVGL
Sbjct: 302 FCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLV 361
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ PS HY C++DL R+G L+EA ++ MPV+P+ W ALL
Sbjct: 362 SKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLS 421
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ H N ++A A+HL +L+P+ +YI+LSNIYA AGMW++VS VR+L+ + +KK
Sbjct: 422 ACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKV 481
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYS ++ R F AG+ + P EI + L ++ GY P+ SVL D+ +E
Sbjct: 482 PGYSCVDLGRE-FQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQE 540
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+R L HSE+LALA+GLL PG T+RI+KNLR+C DCH + S + REI VRD
Sbjct: 541 KERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVK 600
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DGKCSC ++W
Sbjct: 601 RYHHFKDGKCSCNDFW 616
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI AY G ++ A LF+ LP +D VAW +++ + P +A + + G++ D
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGP-INNVVVGSALIDMYSKCGSIDDAYR 243
+ +I ACA LG + + ++ P + VV S+L+DMY+K D
Sbjct: 109 HFVFSSLIKACANLGSV-HVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRA 167
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+F + + + S+++MI G+A GR A++LF
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELF 200
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F +++ K+ WT++I G G +++++LY M G+ P T L AC+ V
Sbjct: 299 KYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHV 358
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
VS G+ + + G L ++ ++ + G L + + MP + D +W
Sbjct: 359 GLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAA 418
Query: 125 LIVAYANNGDMESAGGLFNEL 145
L+ A ++G+ + A + + L
Sbjct: 419 LLSACKHHGNTKMAVRIADHL 439
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LID Y KCG + DA ++F + Q++ ++++++ + H A + ++ +P+
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 288 GVTFIGVLTACSHVG 302
F ++ AC+++G
Sbjct: 109 HFVFSSLIKACANLG 123
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/454 (44%), Positives = 291/454 (64%), Gaps = 15/454 (3%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
++++FD MPE+ +VS T ++ YA +G++++A LF+ + +D V W M+ GY QN P
Sbjct: 112 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMP 171
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+ F RM A + + VT++ V+SAC QLG ++ WV E +G NV VG+
Sbjct: 172 NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQ--FNVHVGT 229
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
AL+DMYSKCGS++DA +F + ++V +++SMI+G+AMHG + A+QLF M + P
Sbjct: 230 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHP 289
Query: 287 NGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKM 334
+TFIG+L+AC H G YG+ P +HY CMV+LLGRAG +E+A ++
Sbjct: 290 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYEL 349
Query: 335 VEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMW 394
V+ M +EP+ +WG LLGAC++H + + L + G YI+LSNIYA+ G W
Sbjct: 350 VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNW 409
Query: 395 DDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQA 454
D V+R+R ++K +G+KK PG S +E + V HEF AG L HP EI L ++ L++
Sbjct: 410 DGVARLRTMMKDSGVKKEPGCSSIEVNNKV-HEFLAGGLNHPKRKEIYMMLEEINGWLKS 468
Query: 455 DGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLF 514
GY P VL+D+ + EK+R L HSEKLA+AFGL+ T PG T++I+KNLR+C DCH
Sbjct: 469 HGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEV 528
Query: 515 MCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ GR+IVVRD RFHHF +G CSCG+YW
Sbjct: 529 TKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 48/271 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ ++ ++ W +I GY G +++ L+ M + P T+ ++ AC ++
Sbjct: 144 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQL 203
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ I G +++VG ++ MY KCG L +R VFD++ ++DVV+W +
Sbjct: 204 GALESGRWVHSY-IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 262
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV YA +G F++ EA++ F+ M G+
Sbjct: 263 IVGYAMHG--------FSQ-----------------------EALQLFKSMCRMGLHPTN 291
Query: 186 VTLVGVISACAQLGVIKYANWVCE-------IAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+T +G++SAC G WV E + + G P + ++++ + G +
Sbjct: 292 ITFIGILSACGHSG------WVTEGWDIFNKMKDEYGIEP--KIEHYGCMVNLLGRAGHV 343
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
+ AY + M + + + +++ +HG+
Sbjct: 344 EQAYELVKNMNIEPDPVLWGTLLGACRLHGK 374
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/563 (39%), Positives = 335/563 (59%), Gaps = 43/563 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACTEV 65
VF ++++ N F++ ALI+G+ + +S+ LY M V F++ ++ KAC ++
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L G+Q+H Q +L D +VGN+M+ MY+ G + +R+VFD MP RDVVSW +
Sbjct: 123 LAFDEGRQVHGQ-VLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y G++E A LF+E+P +D V+ AM+ GY + M G+ D
Sbjct: 182 IAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGK------------EMLSLGLRPDG 229
Query: 186 VTLVGVISACAQLGVIKYANWV------CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+V V+SA A LG ++ W+ +I SGF +GSALIDMYSKCG I+
Sbjct: 230 PAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGF-------IGSALIDMYSKCGYIE 282
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+AY +F + +RN+ ++SMI G A+HG A A+ +F +M + + +PN +TF+G+L+ C
Sbjct: 283 NAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTC 342
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL + Y + P HY CM+DL GRAG LE+AL +++ MP E +
Sbjct: 343 SHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA 402
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W A+L A H + EI + AA EL PD +Y++LSNIYA AG WDDV+++R +++
Sbjct: 403 WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQ 462
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAG-DLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+KK G S + + G +HEF G +L S ++ + +++ RL+ GY+P+L VL
Sbjct: 463 RGVKKIAGCSSMLVN-GKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVL 521
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D+ DE K+ +L HSEK+A+AFGL+ + A + I+KNLR+C DCH FM S+V R+
Sbjct: 522 LDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQ 581
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF++G CSC YW
Sbjct: 582 IIMRDQNRFHHFENGCCSCNEYW 604
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----------------- 46
R VF+++ ++ W ++I GY+ G ++ + L+ M
Sbjct: 162 LARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKEML 221
Query: 47 --GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL 104
G+ P + ++ A ++ V G+ +HA + S ++G+ +I MY KCG++
Sbjct: 222 SLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYI 281
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
+ VF + R N GD W +M++G +
Sbjct: 282 ENAYHVFRSISHR------------RNIGD------------------WNSMISGLAIHG 311
Query: 165 KPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
REA++ F M+ +E + +T +G++S C+ G+++ + E + + + +
Sbjct: 312 LAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE-SMHEKYKIVPRIQH 370
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ID++ + G ++DA + M + ++ ++ +++ HG H I + E
Sbjct: 371 YGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG--HIEIGKSAALRAIE 428
Query: 284 TKPN 287
P+
Sbjct: 429 LAPD 432
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 320/561 (57%), Gaps = 54/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL--FKACT 63
R F+++ NP + TA+ GY+ + S+ L+ +M V +AL F A
Sbjct: 149 RRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASA 208
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEMPERDVVS 121
V D + +HA I GF + V NTM+ Y K G L +RKVFD M ERDV
Sbjct: 209 RVPDRGVTASLHA-LIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDV-- 264
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG- 180
V+W +M+ Y QN EAI + +M G
Sbjct: 265 -----------------------------VSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 295
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ + V L V+ ACA G I+ + G NV VG++++DMYSKCG ++
Sbjct: 296 GIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE--ENVYVGTSIVDMYSKCGRVE 353
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A R F +K++N+ S+S+MI G+ MHGR A+++F +M ++ +PN +TFI VL ACS
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +G+ +HY CMVDLLGRAGCL+EA ++++M V+P+ +W
Sbjct: 414 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 473
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+IH+N E+A+++ LFEL+ G Y++LSNIYA A MW DV R+R L+K
Sbjct: 474 GALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTR 533
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
++K PGYS E +G I+ F GD +HP EI L LL+R+Q GY PN SVL+D
Sbjct: 534 RIEKPPGYSSFEL-KGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHD 592
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +EEK+ L HSEKLA+AF L+ + P + + I+KNLR+C DCH M +++ REI+
Sbjct: 593 LDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREII 652
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFHHF+DG CSC +YW
Sbjct: 653 IRDLQRFHHFKDGLCSCRDYW 673
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 320/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+ F + K+ W A+I GY +++SL+ M +EGIG TLS + K+ +
Sbjct: 414 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 473
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V + +Q+H ++ GF SD+YV N++I Y KC +
Sbjct: 474 QVVHVCRQVHGLSVK-SGFHSDIYVVNSLIDSYGKCSHV--------------------- 511
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F E + D V++T+M+T Y Q + EA++ F MQ ++ D
Sbjct: 512 ----------EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 561
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+++ACA L + + GF + ++ G++L++MY+KCGSIDDA R F
Sbjct: 562 FVCSSLLNACANLSAFEQGKQLHVHILKYGF--VLDIFAGNSLVNMYAKCGSIDDAGRAF 619
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R + S+S+MI G A HG A+QLF M+K PN +T + VL AC+H GL
Sbjct: 620 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 679
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G P +HYACM+DLLGRAG + EA+++V KMP E N VWGALLGA
Sbjct: 680 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH++ E+ + AA LF LEP+K G +++L+NIYASAG W++V+ VRRL++ + +KK P
Sbjct: 740 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 799
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + ++ F GD +H S EI L +L D + GY P + L+DV EK
Sbjct: 800 GMSWIEV-KDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEK 858
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFGL+ T GA +R+ KNLR+C DCH +++ REI+VRD R
Sbjct: 859 ELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINR 918
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 919 FHHFKDGSCSCGDYW 933
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++K + W A+I G +L H + ++ L M+R GI P FTLS+ KAC +
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGL 374
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG+Q+H+ +++ SDL+V ++ MY KC L +R F+ +PE+D+++W
Sbjct: 375 KELGRQLHS-SLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW----- 428
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A+++GY Q + EA+ F M G+ + T
Sbjct: 429 --------------------------NAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L ++ + A L V+ V ++ SGF +++ V ++LID Y KC ++DA RIF
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFH--SDIYVVNSLIDSYGKCSHVEDAERIFEE 520
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
++ S++SMI +A +G+ A++LF +M E KP+ +L AC+
Sbjct: 521 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 580
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
HV + YG +V++ + G +++A + ++ E W A++G
Sbjct: 581 KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQ 639
Query: 357 H 357
H
Sbjct: 640 H 640
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 62/407 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R + ++ + W+ALI GY G ++ + M G+ FT S++ KAC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V D+ +G+Q+H +++ GF D++V NT++ MY KC S+++FDE+PER+VVSW
Sbjct: 169 IVKDLRIGKQVHG-VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW- 226
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
A+ + YVQ EA+ F M +G++
Sbjct: 227 ------------------------------NALFSCYVQIDFCGEAVGLFYEMVLSGIKP 256
Query: 184 DYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ +L +++AC L G I + I G + P + +AL+DMY+K G +
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYL---IKLGYDWDPFS----ANALVDMYAKVGDL 309
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA +F +KQ ++ S++++I G +H A++L G M ++ PN T L AC
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369
Query: 299 SHVGLKCYG---------VSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+ +GLK G + +D + +VD+ + LE+A +P E + W
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAW 428
Query: 348 GALL-GACQIHRNPEIAQIAANHLFELEPDKIG-NYIILSNIYASAG 392
A++ G Q + E A + E+ + IG N LS I S
Sbjct: 429 NAIISGYSQYWEDME----ALSLFVEMHKEGIGFNQTTLSTILKSTA 471
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 46/325 (14%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P S + S L C + G QIHA I G + D + N +I +Y KC G +RK
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAH-ITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
+ DE E D+VS W+A+++GY QN A
Sbjct: 113 LVDESSEPDLVS-------------------------------WSALISGYAQNGLGGGA 141
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
+ F M GV+ + T V+ AC+ + ++ V + SGF +V V + L+
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE--GDVFVANTLV 199
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
MY+KC D+ R+F + +RNV S++++ + A+ LF +MV + KPN
Sbjct: 200 VMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEF 259
Query: 290 TFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+ ++ AC+ H L G +VD+ + G L +A+ + EK+
Sbjct: 260 SLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI 319
Query: 339 PVEPNGGVWGALLGACQIHRNPEIA 363
+P+ W A++ C +H + E A
Sbjct: 320 K-QPDIVSWNAVIAGCVLHEHHEQA 343
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 162/346 (46%), Gaps = 45/346 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+++ +N W AL Y+ +++ L+ M GI P F+LS++ ACT +
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D S G+ IH I L G+ D + N ++ MY K G L + VF+++ + D+VS
Sbjct: 272 RDSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS---- 326
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W A++ G V + +A+E +M+ +G+ +
Sbjct: 327 ---------------------------WNAVIAGCVLHEHHEQALELLGQMKRSGICPNI 359
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL + ACA +G+ + + + +++ V L+DMYSKC ++DA F
Sbjct: 360 FTLSSALKACAGMGLKELGRQLH--SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
+ ++++ +++++I G++ + A+ LF +M K N T +L + + H
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 477
Query: 301 VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPV 340
V + +G+S + ++ ++D G+ +E+A ++ E+ +
Sbjct: 478 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 523
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/576 (38%), Positives = 329/576 (57%), Gaps = 49/576 (8%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F+ +LIRGY G +++I LY M G+ P +T + CT++ G Q+H
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN----- 132
+ +G D+++ N +I Y +CG + KVF+ M ER+VVSWT LI YA
Sbjct: 157 VVKMG-LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 133 ------------------------GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
G +++A LF+E ++ V + +++ Y + RE
Sbjct: 216 AVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE 275
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVV 223
A+ + M G D VT++ ISA AQL G + + WV E +G P + +
Sbjct: 276 ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGI-PCD-MR 333
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ +AL+DM+++CG A ++F M +R+V ++++ I AM G A LF M+
Sbjct: 334 LNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQG 393
Query: 284 TKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
KP+ V F+ VLTACSH G ++ +G+SP +HY CMVDLLGRAG L EA
Sbjct: 394 VKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAF 453
Query: 333 KMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
+++ MP+EPN VWG+LL AC++H+N E+A AA + EL P + G +++LSNIYASAG
Sbjct: 454 DLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 513
Query: 393 MWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRL 452
W DV+RVR L+ G++K PG S ++ + GVIHEF +GD +HP T I L ++ R
Sbjct: 514 KWTDVARVRLNLREKGVRKVPGSSSVQVN-GVIHEFTSGDESHPEMTHIALMLQEMNCRF 572
Query: 453 QADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
G+ P+L +VL DV ++EK+ +L HSEKLA+AFGL+ T +R++KNLR+C DCH
Sbjct: 573 SDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCH 632
Query: 513 LFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
F AS + REI+VRDN RFH F+ G CSC +YW
Sbjct: 633 SFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 331/556 (59%), Gaps = 50/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
L+F+++ +N FLW +IRGY G + +ISLY MR G+ P FT + KAC+ +
Sbjct: 56 HLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSAL 115
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH + ++ G SD++VG +I MY KC GC
Sbjct: 116 SAMEEGKKIH-KDVIRSGLESDVFVGAALIDMYAKC---GC------------------- 152
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ESA +F+++ +D V W +M+ Y QN +P E++ M + G++
Sbjct: 153 ---------VESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTE 203
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V I+A A G++ + + GF +N V +AL+DMY+K GS++ A +F
Sbjct: 204 GTFVISIAASADNGLLPQGKELHGYSWRHGFE--SNDKVKTALMDMYAKSGSVNVARSLF 261
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++++ V S+++MI G+AMHG A+ A+ LF +M K + P+ +TF+GVL ACSH GL
Sbjct: 262 ELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLN 320
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + P+ HY CM+DLLG G LEEA K++ +M VEP+ GVWGALL +
Sbjct: 321 EGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHS 380
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+ ++A L ELEPD GNY+ILSN+YA AG WD V+R+R L+ GLKK+
Sbjct: 381 CKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSI 440
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
SW+E G++ +H F + D +HP S I L ++ GY P + SV +DV D+E
Sbjct: 441 ACSWIEVGNK--VHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDE 498
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K ++ HSE+LA+AFGL++TS G + I+KNLRICEDCH+ + S++ REI +RD
Sbjct: 499 KVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVN 558
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DG CSCG++W
Sbjct: 559 RYHHFKDGVCSCGDFW 574
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 138/313 (44%), Gaps = 46/313 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
++L ++C + G+Q+HA+ I G + + + ++ +Y C L + +FD +
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHAR-ICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+R++ W M+ GY N AI + +
Sbjct: 64 KRNLF-------------------------------LWNVMIRGYAWNGPYELAISLYYQ 92
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ G+ D T V+ AC+ L ++ + + SG ++V VG+ALIDMY+KC
Sbjct: 93 MRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLE--SDVFVGAALIDMYAKC 150
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G ++ A ++F + +R+V ++SM+ ++ +G+ ++ L M KP TF+ +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 296 TACSHVGL-----KCYGVS-----PSTDHY-ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A + GL + +G S S D ++D+ ++G + A + E + E
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKRV 269
Query: 345 GVWGALLGACQIH 357
W A++ +H
Sbjct: 270 VSWNAMITGYAMH 282
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+C++ G F P+ + + L+++Y C S+ +A+ +F + +RN+F ++ MI G+A +
Sbjct: 27 ICQV--GISFNPL----LATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWN 80
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHY 315
G AI L+ M P+ TF VL ACS H + G+
Sbjct: 81 GPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVG 140
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
A ++D+ + GC+E A ++ +K+ E + W ++L + P+
Sbjct: 141 AALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLATYSQNGQPD 185
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 323/555 (58%), Gaps = 46/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE++ ++N +WT++I GY+ +++ LY M +G P T++ L AC E+
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ +G ++H+ + + +G+ ++ MY KCG L +R+VFD++ ++DV +W+ L
Sbjct: 194 KDLGVGMKLHSHIREMDMKICAV-LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSAL 252
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y N A LF E V G N +P E
Sbjct: 253 IFGYVKNNRSTEALQLFRE------------VAGG-SNMRPNE----------------- 282
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ VISACAQLG ++ WV + + G ++V + ++LIDM+SKCG ID A RIF
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKG--HSVSLNNSLIDMFSKCGDIDAAKRIF 340
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++ S++SM+ GFA+HG A+ F M T+ +P+ +TFIGVLTACSH GL
Sbjct: 341 DSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQ 400
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YGV ++HY CMVDLL RAG L EA + + MP++P+G +WG++LGA
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+++ N E+ + AA L +LEP G YI+LSNIYA MW++V +VR L+ G++K P
Sbjct: 461 CRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTP 520
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S + D + H F AGD +HP EI L + ++L+ GY + VL ++ D +K
Sbjct: 521 GCSSVVID-NIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKK 579
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLAL +GLL + G + I+KNLR+C DCH + S++ R+I +RD R
Sbjct: 580 EESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNR 639
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 640 FHHFKDGSCSCRDYW 654
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 58/390 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
VF + + W +++R ++ + ++ Y M R P FT +L K C +L
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +G+ +H Q + SDLY+ T++ MY CG
Sbjct: 94 EFKVGKVLHGQVVKYM-LHSDLYIETTLLNMYAACG------------------------ 128
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D++SA LF + ++KV WT+M++GY++N P EA+ +++M+ G D V
Sbjct: 129 -------DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 187 TLVGVISACAQ---LGV-IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T+ ++SACA+ LGV +K + + E+ V+GSAL++MY+KCG + A
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKIC------AVLGSALVNMYAKCGDLKTAR 235
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHV 301
++F + ++V+++S++I G+ + R+ A+QLF ++ + +PN VT + V++AC+ +
Sbjct: 236 QVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295
Query: 302 G-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G + Y H ++D+ + G ++ A ++ + M + + W ++
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSM 354
Query: 351 LGACQIH--RNPEIAQIAANHLFELEPDKI 378
+ +H +AQ +L+PD+I
Sbjct: 355 VNGFALHGLGREALAQFRLMQTTDLQPDEI 384
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 322/558 (57%), Gaps = 47/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+ + + WTA+I YI +L + + L+ M EG+ P T+ +L K C
Sbjct: 279 AYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKEC 338
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ LG+ +HA T L GFT L + I MY KCG
Sbjct: 339 GTAGALELGKLLHAFT-LRNGFTLSLVLATAFIDMYGKCG-------------------- 377
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D+ SA +F+ KD + W+AM++ Y QN EA + F M G+
Sbjct: 378 -----------DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T+V ++ CA+ G ++ W+ + G ++++ ++ +DMY+ CG ID A+
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIK--GDMILKTSFVDMYANCGDIDTAH 484
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F R++ +++MI GFAMHG AA++LF +M PN +TFIG L ACSH G
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSG 544
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +G +P +HY CMVDLLGRAG L+EA ++++ MP+ PN V+G+
Sbjct: 545 LLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSF 604
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++H+N ++ + AA LEP K G +++SNIYASA W DV+ +RR +K G+
Sbjct: 605 LAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIV 664
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S +E + G++HEF GD HP++ ++ + + ++ ++L+ GY P++ VL+++
Sbjct: 665 KEPGVSSIEVN-GLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDK 723
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K L HSEKLA+A+GL++T+PG +RI+KNLR+C+DCH S++ GREI+VRD
Sbjct: 724 EKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRD 783
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 784 RNRFHHFKEGSCSCCDYW 801
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N + + LI YI D+ +Y MR +F + ++ KAC + LGQ++H
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ GF D++V N +I MY + G L +R +FD++ +DVVSW+ +I +Y +G +
Sbjct: 148 G-FVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLL 206
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+ A L ++ +V KP E + ++ +
Sbjct: 207 DEALDLLRDM--------------HVMRVKPSE-----------------IGMISITHVL 235
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A+L +K + +G + V + +ALIDMY KC ++ A R+F G+ + ++ S
Sbjct: 236 AELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIIS 295
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+++MI + + ++LF M+ PN +T + ++ C G
Sbjct: 296 WTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAG 342
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 320/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+ F + K+ W A+I GY +++SL+ M +EGIG TLS + K+ +
Sbjct: 387 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 446
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V + +Q+H ++ GF SD+YV N++I Y KC +
Sbjct: 447 QVVHVCRQVHGLSVK-SGFHSDIYVVNSLIDSYGKCSHV--------------------- 484
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F E + D V++T+M+T Y Q + EA++ F MQ ++ D
Sbjct: 485 ----------EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+++ACA L + + GF + ++ G++L++MY+KCGSIDDA R F
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILKYGF--VLDIFAGNSLVNMYAKCGSIDDAGRAF 592
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R + S+S+MI G A HG A+QLF M+K PN +T + VL AC+H GL
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 652
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G P +HYACM+DLLGRAG + EA+++V KMP E N VWGALLGA
Sbjct: 653 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH++ E+ + AA LF LEP+K G +++L+NIYASAG W++V+ VRRL++ + +KK P
Sbjct: 713 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 772
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + ++ F GD +H S EI L +L D + GY P + L+DV EK
Sbjct: 773 GMSWIEV-KDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEK 831
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFGL+ T GA +R+ KNLR+C DCH +++ REI+VRD R
Sbjct: 832 ELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINR 891
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 892 FHHFKDGSCSCGDYW 906
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 58/406 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F+++ +N W AL Y+ +++ L+ M GI P F+LS++ ACT +
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D S G+ IH I LG + D + N ++ MY K G L + VF+++ + D+VSW +
Sbjct: 272 RDSSRGKIIHGYLIKLG-YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAV 330
Query: 126 IVA-------------------------------------------YANNGDMESAGGLF 142
I Y+ +E A F
Sbjct: 331 IAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 390
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
N LP KD +AW A+++GY Q + EA+ F M G+ + TL ++ + A L V+
Sbjct: 391 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 450
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
V ++ SGF +++ V ++LID Y KC ++DA RIF ++ S++SMI
Sbjct: 451 VCRQVHGLSVKSGFH--SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITA 508
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPS 311
+A +G+ A++LF +M E KP+ +L AC+ HV + YG
Sbjct: 509 YAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD 568
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+V++ + G +++A + ++ E W A++G H
Sbjct: 569 IFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQH 613
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 44/283 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R + ++ + W+ALI GY G ++ + M G+ FT S++ KAC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V D+ +G+Q+H +++ GF D++V NT++ MY KC S+++FDE+PER+VVSW
Sbjct: 169 IVKDLRIGKQVHG-VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW- 226
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
A+ + YVQ EA+ F M +G++
Sbjct: 227 ------------------------------NALFSCYVQXDFCGEAVGLFYEMVLSGIKP 256
Query: 184 DYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ +L +++AC L G I + I G + P + +AL+DMY+K G +
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYL---IKLGYDWDPFS----ANALVDMYAKVGDL 309
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
DA +F +KQ ++ S++++I G +H A++L G M +
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 155/361 (42%), Gaps = 46/361 (12%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P S + S L C + G QIHA I G + D + N +I +Y KC G +RK
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAH-ITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
+ DE E D+VS W+A+++GY QN A
Sbjct: 113 LVDESSEPDLVS-------------------------------WSALISGYAQNGLGGGA 141
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
+ F M GV+ + T V+ AC+ + ++ V + SGF +V V + L+
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE--GDVFVANTLV 199
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
MY+KC D+ R+F + +RNV S++++ + A+ LF +MV + KPN
Sbjct: 200 VMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEF 259
Query: 290 TFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+ ++ AC+ H L G +VD+ + G L +A+ + EK+
Sbjct: 260 SLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI 319
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
+P+ W A++ C +H + E A + + + S+++ S G+ D S
Sbjct: 320 K-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYS 378
Query: 399 R 399
+
Sbjct: 379 K 379
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 315/545 (57%), Gaps = 55/545 (10%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQ 77
+W +IRGY + +++I LY SM +GI P + FT L +C + + G ++H+
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
I+ GF SDL+V N +I +Y VF G++
Sbjct: 61 -IIKHGFESDLFVRNALIHLY----------SVF---------------------GNLNL 88
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A LF+E ++D V++ M+ GY + +P A+ F MQ +D VTLV V+SACA+
Sbjct: 89 ARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ----NSDEVTLVAVLSACAR 144
Query: 198 LGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVF 254
LG + + E F N ++ +A++DMY+KCGSID A IF VG + F
Sbjct: 145 LGAFDLGKRLYHQYIENGVFN--QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGF 202
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
++SMI G A HG AI +F +++ T KP+ VTF+GVL AC H GL
Sbjct: 203 VFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESM 262
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG+ P +HY CMVDLLGR GCLEEA +V+KMP E N +W ALL AC+ H N +I
Sbjct: 263 FNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKI 322
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+IA L E+E Y++LSNI A A W++ +VR++++ G++K PG+S++E
Sbjct: 323 GEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELG- 381
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
G IH F A D +HP EI+ L D+ RL++ GY PN V++D+ +EEK+ ++ HSE
Sbjct: 382 GAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSE 441
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLALAFGL+ SP T+RI+KNLRIC DCH S++ GREI VRD MRFHHF++G C
Sbjct: 442 KLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSC 501
Query: 543 SCGNY 547
SC ++
Sbjct: 502 SCMDF 506
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/555 (40%), Positives = 324/555 (58%), Gaps = 49/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ ++ K W +I G G +++ + + M EG P T+ + AC +
Sbjct: 301 RLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANL 360
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G +H L S++ V N++I MY KC ++V
Sbjct: 361 GDLERGWFVHKLLDKLK-LDSNVSVMNSLISMYSKC------KRV--------------- 398
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A +FN L K V W AM+ GY QN +EA+ F MQ G++ D
Sbjct: 399 ----------DIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDC 447
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLVGVI+A A V + A W+ +A + NNV V +AL+DMY+KCG+I A ++F
Sbjct: 448 FTLVGVITALADFSVNRQAKWIHGLAVRACMD--NNVFVSTALVDMYAKCGAIKTARKLF 505
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M++R+V ++++MI G+ HG + LF +M K KPN +TF+ V++ACSH G
Sbjct: 506 DMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVE 565
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P+ DHY+ MVDLLGRAG L++A +++MP++P V GA+LGA
Sbjct: 566 EGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGA 625
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH+N E+ + AA LF+L+PD+ G +++L+NIYAS MWD V++VR ++ GL K P
Sbjct: 626 CKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTP 685
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E R IH F +G HP S +I L L D ++A GY P+ S+ +DV ++ K
Sbjct: 686 GCSWVEL-RNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVK 743
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
K++L +HSE+LA+AFGLL TSPG T+ I KNLR+C DCH S V GREI+VRD R
Sbjct: 744 KQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRR 803
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 804 FHHFKNGSCSCGDYW 818
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE V+ K L+ +++GY L D++ + M + + V + L + C E LD
Sbjct: 101 VFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLD 160
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH I+ GF S+L+V ++ +Y KC + + K+F+ M
Sbjct: 161 LKKGREIHG-LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQH----------- 208
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD V+WT +V GY QN + A++ +MQ AG + D VT
Sbjct: 209 --------------------KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV ++ A A + ++ + A SGF + NV +AL+DMY KCGS A +F G
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVT--NALLDMYFKCGSARIARLVFKG 306
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M+ + V S+++MI G A +G + A F M+ P VT +GVL AC+++G
Sbjct: 307 MRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLG 361
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 29/309 (9%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T++I + G A +F + LK V + M+ GY +N+ +A+ +F RM V
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 183 T---DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
DY L+ + C + +K + + +GF +N+ V +A++ +Y+KC ID
Sbjct: 143 LVVGDYACLLQL---CGENLDLKKGREIHGLIITNGFE--SNLFVMTAVMSLYAKCRQID 197
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+AY++F M+ +++ S+++++ G+A +G A A+QL M + KP+ VT + +L A +
Sbjct: 198 NAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVA 257
Query: 300 HVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
+K + S YA ++D+ + G A ++V K
Sbjct: 258 --DMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA-RLVFKGMRSKTVVS 314
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR---VRRL 403
W ++ C +N E + A L L+ ++ + + + + D+ R V +L
Sbjct: 315 WNTMIDGCA--QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKL 372
Query: 404 LKMTGLKKN 412
L L N
Sbjct: 373 LDKLKLDSN 381
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 329/567 (58%), Gaps = 59/567 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISL-----------YCSMRREGIGPVSFT 54
R +F+++ +N WT++I GY+ ++++ L Y + G+G S
Sbjct: 141 RKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVL 200
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
L + AC V S+ + +H + GF L VGNT++ Y KCG + SRKV
Sbjct: 201 LGCVISACARVCVKSVTECVHGLAVK-KGFEGCLAVGNTLMDAYAKCGEISVSRKV---- 255
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
F+ + D +W +++ Y QN EA F
Sbjct: 256 ---------------------------FDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 175 RMQYAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M G V + VTL V+ ACA G ++ C + +N+VVG++++DMY
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGK--CIHDQVVKMELEDNLVVGTSIVDMYC 346
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG ++ A + F +K++NV S++ M+ G+ MHG A+++F +M++ KPN +TF+
Sbjct: 347 KCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVS 406
Query: 294 VLTACSHVGL-----------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL ACSH GL KC + V P +HY+CMVDLLGRAG L+EA ++++M V+
Sbjct: 407 VLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVK 466
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P+ VWG+LLGAC+IH+N E+ +I+A LF+L+P G Y++LSNIYA AG WDDV R+R
Sbjct: 467 PDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMR 526
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+K GL K PGYS +E +G +H F GD HP +I + L +L +LQ GY PN+
Sbjct: 527 ILMKNHGLLKTPGYSIVE-HKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNV 585
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
SVLYDV EEK +L HSEKLA+AFG++ + PG+ ++I+KNLRIC DCH + S++
Sbjct: 586 TSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKI 645
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ REIV+RD+ RFHHF+DG CSCG+YW
Sbjct: 646 VNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 151/286 (52%), Gaps = 24/286 (8%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+ W ++I + G ++ + SMR+ + P T K+C+ + D+ G+QIH Q
Sbjct: 52 YSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQ 111
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ G + SD++V + +I MY KCG+L +RK+FDE+PER+VVSWT +I Y N
Sbjct: 112 AFVFG-YGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A LF E L D+ ++ + GV D V L VISACA+
Sbjct: 171 AVFLFKEFLLVDETD--------------------YDEIVGVGVGVDSVLLGCVISACAR 210
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ V V +A GF + VG+ L+D Y+KCG I + ++F GM++ +V S++
Sbjct: 211 VCVKSVTECVHGLAVKKGFEGC--LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVG 302
S+I +A +G + A LF DMVK E + N VT VL AC+H G
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSG 314
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 47/279 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKA 61
S R VF+ ++ + W +LI Y G ++ SL+ M + G + + TLSA+ A
Sbjct: 250 SVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLA 309
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + +G+ IH Q + + +L VG +++ MY KCG + +RK FD + ++V S
Sbjct: 310 CAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
WT MV GY + +EA++ F M G+
Sbjct: 369 WT-------------------------------VMVAGYGMHGHGKEAMKVFYEMIRCGI 397
Query: 182 ETDYVTLVGVISACAQLGVIK-----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ +Y+T V V++AC+ G++K + CE G S ++D+ + G
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY------SCMVDLLGRAG 451
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
+ +AY + MK + F +LG R H ++L
Sbjct: 452 YLKEAYGLIQEMKVKPDFIVWGSLLGAC---RIHKNVEL 487
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS 309
+ +V+S++S+I FA G + A+ F M K PN TF + +CS + C G
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 310 PSTDHY-----------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIH 357
+ + ++D+ + G L +A K+ +++P E N W +++ G Q
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP-ERNVVSWTSMISGYVQNE 166
Query: 358 RNPEIAQIAANHLFELEPD 376
R E + L E D
Sbjct: 167 RAREAVFLFKEFLLVDETD 185
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 326/553 (58%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N + LI+GY ++I L+ + RE + P FT +++ +AC +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEG 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++LG QIH I +G SD++V N ++ +Y KCG
Sbjct: 154 LNLGNQIHCHVIKIG-LHSDVFVSNALMDVYAKCG------------------------- 187
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME++ LF E P ++ V W ++ G+VQ +A+ F M V+ VT
Sbjct: 188 ------RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ACA L ++ + + + F ++VV +ALIDMY+KCGSI DA +F
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFD--KDIVVTNALIDMYAKCGSIKDARLVFDL 299
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +++ S+++MI G++MHG A+++F M +TE KP+ +TF+GVL+AC++ GL
Sbjct: 300 MNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQG 359
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+ P +HY CMV LLGR G L++A+K+++++P +P+ VW ALLGAC
Sbjct: 360 QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACV 419
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH + E+ +I+A + E+EP +++LSN+YA+A WD+V+ VR+ +K G+KK PG
Sbjct: 420 IHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGL 479
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E +G +H F GD +HP I L L + + GY PN VL DV DEEK+R
Sbjct: 480 SWIES-QGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKER 538
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LAL+FG++ T G+ +RIMKNLRIC DCH + S+V+ REIVVRD RFH
Sbjct: 539 LLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFH 598
Query: 536 HFQDGKCSCGNYW 548
HFQ+G CSCG+YW
Sbjct: 599 HFQEGLCSCGDYW 611
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 182/401 (45%), Gaps = 67/401 (16%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG---PVSFTLSALFKA---CTEVLDV 68
+N FL RG+ +Q + +E +G P F A A C + +
Sbjct: 4 RNNFLIQFSRRGFSVQS---------AKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEP 54
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S G+ +H + + GG DL+ N ++ MYVK FL
Sbjct: 55 SRGKGLHCEILKRGG-CLDLFAWNILLNMYVKSDFLC----------------------- 90
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
A LF+E+P ++ +++ ++ GY ++ + EAIE F R+ + V + T
Sbjct: 91 --------DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTF 141
Query: 189 VGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA + + N + C + + G ++V V +AL+D+Y+KCG ++++ +F
Sbjct: 142 ASVLQACATMEGLNLGNQIHCHVIK---IGLHSDVFVSNALMDVYAKCGRMENSMELFAE 198
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----G 302
RN +++++I+G G A++LF +M++ + VT+ L AC+ + G
Sbjct: 199 SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPG 258
Query: 303 LKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
L+ + ++ T ++D+ + G +++A ++V + + + W A++ +
Sbjct: 259 LQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSM 317
Query: 357 HRNPEIAQIAANHLFELE--PDKIGNYIILSNIYASAGMWD 395
H A + + E E PDK+ +LS A+AG+ D
Sbjct: 318 HGLGREALRIFDKMQETEVKPDKLTFVGVLSAC-ANAGLLD 357
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ + ++ W A+I GY + G ++++ ++ M+ + P T + AC
Sbjct: 294 RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANA 353
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ GQ I G + M+ + + G L + K+ DE+P + V+ W
Sbjct: 354 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 413
Query: 125 LIVAYANNGDME----SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
L+ A + D+E SA + E+ +DK + Y + + M+ G
Sbjct: 414 LLGACVIHNDIELGRISAQRVL-EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKG 472
Query: 181 VETD 184
V+ +
Sbjct: 473 VKKE 476
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/457 (44%), Positives = 290/457 (63%), Gaps = 21/457 (4%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
++K+F ++ R++V T +I Y+ G +E A +F+++ KD V W+AM++GY ++ KP
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG---PINNVV 223
+EA+ F MQ G++ D VT++ VISACA+LGV+ A W+ + +G G P+NN
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN-- 119
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
ALIDMY+KCG++ A +F M+ RNV S++SMI FA+HG A A++ F M
Sbjct: 120 ---ALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDEN 176
Query: 284 TKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEA 331
KPNGVTF+GVL ACSH GL + ++P +HY CMVDL GRA L +A
Sbjct: 177 IKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDA 236
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
L++VE MP+ PN +WG+L+ ACQIH E+ + AA + ELEPD G + LSNIYA
Sbjct: 237 LELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKD 296
Query: 392 GMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDR 451
W DV +R L+K G+ K G S +E + V +EF D H + +I + L +++
Sbjct: 297 RRWQDVGELRNLMKQRGISKERGCSRIELNNQV-YEFVMADKKHKQADKIYEKLDEVVKE 355
Query: 452 LQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDC 511
L+ GY PN RSVL DV +E KK +++ HSEKLAL +GL+ G+ +RI+KNLR+CEDC
Sbjct: 356 LKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDC 415
Query: 512 HLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
H F+ S+V G EI+VRD RFHH++ G CSC +YW
Sbjct: 416 HTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 36/264 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+Q++ K+ W+A+I GY +++++L+ M+ GI P T+ ++ AC +
Sbjct: 34 RLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARL 93
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + IH + G L V N +I MY KCG LG +R VF++M R+V+SWT +
Sbjct: 94 GVLDRAKWIH-MYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSM 152
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A+A +GD + A+++F +M+ ++ +
Sbjct: 153 INAFAIHGDASN-------------------------------ALKFFYQMKDENIKPNG 181
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT VGV+ AC+ G+++ + P + ++D++ + + DA +
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHY--GCMVDLFGRANLLRDALEL 239
Query: 245 FVGMK-QRNVFSYSSMILGFAMHG 267
M NV + S++ +HG
Sbjct: 240 VETMPLAPNVVIWGSLMAACQIHG 263
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/468 (47%), Positives = 300/468 (64%), Gaps = 15/468 (3%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEM--PERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
N M+ Y + G + ++FDEM R+ V+W +I AY GD++SA LFN +P ++
Sbjct: 140 NAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRN 199
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-DYVTLVGVISACAQLGVIKYANWVC 208
V W +M+ GY QN + AIE F+ M A T D VT+V VISAC LG ++ NWV
Sbjct: 200 VVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVV 259
Query: 209 EIAEGSGFGPINNVVVG-SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG 267
+ I + G +A+I MYS+CGS++DA R+F M R+V SY+++I GFA HG
Sbjct: 260 RFLTEN---QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHG 316
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-------VSPSTDHYACMVD 320
AI L M + +P+ VTFIGVLTACSH GL G P+ DHYACMVD
Sbjct: 317 HGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVD 376
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
LLGR G LE+A + +E+MP+EP+ GV+G+LL A +IH+ E+ ++AAN LFELEPD GN
Sbjct: 377 LLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGN 436
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTE 440
+I+LSNIYASAG W DV R+R +K G+KK G+SW+E G +H+F D +H S +
Sbjct: 437 FILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG-GKLHKFIVADRSHERSDD 495
Query: 441 IQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVR 500
I Q L +L +++ GY + VL DV +EEK+ I+ THSEKLA+ + LL + GA +R
Sbjct: 496 IYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIR 555
Query: 501 IMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++KNLR+C DCH + S++ GR I+VRDN RFH F DG CSC +YW
Sbjct: 556 VVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
Y+N W A+I Y+ G L + L+ +M G T +++ + ++ +
Sbjct: 166 YRNSVTWNAMISAYMRVGDLDSARKLFNTMP----GRNVVTWNSMIAGYAQNGQSAMAIE 221
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC-------SRKVFDEMPERDVVSWTELI 126
+ + I T D TM+ + CG LG R + + + + +I
Sbjct: 222 LFKEMITAKKLTPDEV---TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMI 278
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y+ G ME A +F E+ +D V++ +++G+ + EAI M+ G+E D V
Sbjct: 279 FMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRV 338
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +GV++AC+ G+++ V E + + ++D+ + G ++DA R
Sbjct: 339 TFIGVLTACSHAGLLEEGRKVFESIKDPAIDHY------ACMVDLLGRVGELEDAKRTME 392
Query: 247 GM 248
M
Sbjct: 393 RM 394
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 330/587 (56%), Gaps = 50/587 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKACTEVL 66
+F + F+ LIRG +DS+ + MRR P SF+ + + KA +
Sbjct: 61 LFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE---------- 116
V +G Q+H Q L+ G + L+VG T+I MY +CGF+G +RKVFDEMPE
Sbjct: 121 SVRVGIQLHCQA-LVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMV 179
Query: 117 ---------------------RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
R+++SW ++ Y G++E A +F E+P+KD V+W+
Sbjct: 180 TACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWST 239
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ G+ N EA +F +Q G+ + +L GV+SACAQ G +++ + E SG
Sbjct: 240 MIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSG 299
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVG-MKQRNVFSYSSMILGFAMHGRAHAAIQ 274
I V V +AL+D YSKCG++ A +F M +RN+ S++SM+ AMHG AI
Sbjct: 300 LAWI--VSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIG 357
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLL 322
+F M ++ +P+ + FI +L ACSH GL Y + PS +HY CMVDL
Sbjct: 358 IFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLY 417
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
GRAG L++A + V +MP+ +W LLGAC +H + ++A+ L EL+P+ +++
Sbjct: 418 GRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHV 477
Query: 383 ILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQ 442
+LSN YA AG W D + VRR + + K PG+S +E D+ +++ F AG + + E
Sbjct: 478 LLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDK-IMYTFLAGTKQYKITEEAY 536
Query: 443 QALGDLLDRLQADG-YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRI 501
+ L +++ RL+ +G Y P + VL+D+ +EEK+ + HSEKLA+AFG+ G T+RI
Sbjct: 537 KKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRI 596
Query: 502 MKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+KNLRIC DCH M SQ+ EIVVRD RFH F+DG CSC +YW
Sbjct: 597 VKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ K+ W+ +I G+ G+ +++ S + ++R+G+ P +L+ + AC +
Sbjct: 223 REMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQA 282
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE-MPERDVVSWTE 124
+ G+ +H I G + V N ++ Y KCG + ++ VF+ M ER++VSWT
Sbjct: 283 GALEFGKILHG-FIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTS 341
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ A A +G E EAI F +M+ +G+ D
Sbjct: 342 MMAALAMHGHGE-------------------------------EAIGIFHKMEESGIRPD 370
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEG-SGFGPINNVVVG-SALIDMYSKCGSIDDAY 242
+ + ++ AC+ G+++ CE + G I + ++D+Y + G + AY
Sbjct: 371 EIAFISLLYACSHAGLVEQG---CEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAY 427
Query: 243 RIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
M + +++ +MHG A Q+ + +E PN
Sbjct: 428 EFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERL--SELDPN 471
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVL 295
S+D A R+F +VF ++++I G R ++ F +M + + P+ +F ++
Sbjct: 54 SLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIV 113
Query: 296 TACSH-------VGLKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A ++ + L C + D + ++ + G G + A K+ ++MP EPN
Sbjct: 114 KAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMP-EPNA 172
Query: 345 GVWGALLGAC 354
W A++ AC
Sbjct: 173 IAWNAMVTAC 182
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 323/532 (60%), Gaps = 16/532 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W+ALI + +++I + M + G+ + AC +L
Sbjct: 197 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V++G+ IH+ ++ +G S + + N +I MY KCG + +RK+FDE D++SW +I
Sbjct: 257 VNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y +++A +F+ +P KD V+W++M++GY QN E + F+ MQ +G + D T
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VISACA+L ++ WV + +G NV++G+ LIDMY KCG ++ A +F G
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRNGLTI--NVILGTTLIDMYMKCGCVETALEVFYG 433
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M ++ + +++++ILG AM+G +++ +F +M K PN +TF+GVL AC H+GL G
Sbjct: 434 MIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 493
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ P+ HY CMVDLLGRAG L+EA +++ +MP+ P+ WGALLGAC+
Sbjct: 494 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 553
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H + E+ + L EL+PD G +++LSNIYAS G WDDV +R ++ + K PG
Sbjct: 554 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGC 613
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E + GVIHEF AGD THP+ I+ L ++ +L+ +GY P++ VL DV +EEK+
Sbjct: 614 SMIEAN-GVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 672
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
L HSEKLA+AFGL+ SP +RIMKNLRIC DCH S+ R+IV
Sbjct: 673 TLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 186/421 (44%), Gaps = 77/421 (18%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F ++ N F+W +IR YI + +LY SM +G ++T L +AC+
Sbjct: 30 YTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACS 89
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE---------- 113
+Q+H + LG F SD+YV NT+I + C + + +VF+E
Sbjct: 90 IRRSEWEAKQVHNHVLKLG-FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWN 148
Query: 114 ---------------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
MPER +++ +IV + G + A LF+E+ KD V
Sbjct: 149 SILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT 208
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W+A++ + QN EAI F M GV D V V +SACA L V+ + ++
Sbjct: 209 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSI-------------------------------DDA 241
G N + +ALI MYSKCG I D+A
Sbjct: 269 KIGTESYIN--LQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
IF M +++V S+SSMI G+A + + LF +M + KP+ T + V++AC+
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386
Query: 300 ---------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
H +K G++ + ++D+ + GC+E AL++ M +E W AL
Sbjct: 387 AALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNAL 445
Query: 351 L 351
+
Sbjct: 446 I 446
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 330/554 (59%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++P+ W+ ++ GY G+ ++ + R G ++ + +AC ++ D
Sbjct: 107 LFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKD 166
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ IH T L G +V T++ MY +C + + ++F +M +RD+ +
Sbjct: 167 LKCGRLIHCIT-LKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLAT------ 219
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WT M+ ++ P E++ +F+RM+ G+ D V
Sbjct: 220 -------------------------WTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVA 254
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV V+ ACA+LG + A + G+G+ +V++G+A+IDMY+KCGS++ A IF
Sbjct: 255 LVTVVYACAKLGAMNKAKAIHAYINGTGYSL--DVILGTAMIDMYAKCGSVESARWIFDR 312
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+ RNV ++S+MI + HG+ A++LF M+++ PN +TF+ +L ACSH GL
Sbjct: 313 MQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEG 372
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YGV+P HY CMVDLLGRAG L+EAL+M+E MPVE + +WGALLGAC+
Sbjct: 373 QRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACR 432
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHR+ ++A+ A L +L+ K G+Y++LSNIYA+AG W+D+++ R L+ GL+K PG
Sbjct: 433 IHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGR 492
Query: 416 SWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
+W+E G++ +++F GD THP S EI + L L ++L+ GY P+ VLYDV +E K+
Sbjct: 493 TWIEVGEK--LYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQ 550
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L +HSEKLA+AFGLL G +RI KNLR+C DCH F S + + I+VRD RF
Sbjct: 551 GLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRF 610
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSC +YW
Sbjct: 611 HHFKEGVCSCRDYW 624
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 49/314 (15%)
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+C + V +Q+HAQ G F +L V N ++ MYV+ G L ++++FD M +R
Sbjct: 62 SCRNLFQV---RQVHAQIATNGAF-RNLAVANKLLYMYVERGALEDAQELFDGMSKRHPY 117
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW+ ++ YA G+ S +F EL +++ P +
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFREL---------------LRSGAPLD------------ 150
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
DY V VI AC L +K + I G V + L+DMY++C ++D
Sbjct: 151 ---DYSAPV-VIRACRDLKDLKCGRLIHCITLKCGLD--YGHFVCATLVDMYARCKVVED 204
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A++IFV M +R++ +++ MI A G ++ F M P+ V + V+ AC+
Sbjct: 205 AHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAK 264
Query: 301 VG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+G + G S M+D+ + G +E A + ++M V N W A
Sbjct: 265 LGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVR-NVITWSA 323
Query: 350 LLGACQIHRNPEIA 363
++ A H E A
Sbjct: 324 MIAAYGYHGQGEKA 337
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+ V + L+ MY + G+++DA +F GM +R+ +S+S ++ G+A G + +F
Sbjct: 80 GAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMF 139
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTD--HYAC--MVDLLGRA 325
+++++ + + V+ AC + + C + D H+ C +VD+ R
Sbjct: 140 RELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARC 199
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYII 383
+E+A ++ KM + + W ++GA P + + + + + PDK+ +
Sbjct: 200 KVVEDAHQIFVKM-WKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVA---L 255
Query: 384 LSNIYASAGM 393
++ +YA A +
Sbjct: 256 VTVVYACAKL 265
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ +N W+A+I Y G + ++ L+ M R GI P T +L AC+
Sbjct: 307 RWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHA 366
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ GQ+ + G T D+ M+ + + G L + ++ + MP E+D V W
Sbjct: 367 GLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGA 426
Query: 125 LIVA 128
L+ A
Sbjct: 427 LLGA 430
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 331/561 (59%), Gaps = 27/561 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDS--ISLYCSMRREGIGPVSFTLSALFKACTEV 65
+F+ + + FL+ +I+G++ L + + LY M + + P +FT +L AC ++
Sbjct: 79 LFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI 138
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G QIHA + GF + N++I MYV L +R+VF +P D VSWT L
Sbjct: 139 ---QHGMQIHAH-LFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSL 194
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-D 184
I Y+ G ++ A +F +P K+ +W AM+ YVQ + EA F+RM+ D
Sbjct: 195 ISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLD 254
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
++SAC LG + W+ E + +G + + +A++DMY KCG ++ A ++
Sbjct: 255 KFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLT--TAIVDMYCKCGCLEKALQV 312
Query: 245 F--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + + R + S++ MI G AMHG AAIQLF +M + P+ +TF+ +LTAC+H G
Sbjct: 313 FHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSG 372
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YG+ P +H+ CMVDLLGRAG + EA K++++MPV P+ V G L
Sbjct: 373 LVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTL 432
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+ HRN E+ + + ELEP+ G Y++L+N+YA+AG W+D ++VR+L+ G+K
Sbjct: 433 LGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVK 492
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL--YDV 468
K PG+S +E +G +HEF AG+ HP + E+ + ++L+ L++ GY + VL +D
Sbjct: 493 KAPGFSMIEL-QGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDF 551
Query: 469 SDEEK-KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+EE + L HSEKLA+AFGL T PG T+RI+KNLRICEDCH S V REI+
Sbjct: 552 DEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREII 611
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFH F+ G+CSC +YW
Sbjct: 612 VRDRTRFHRFKMGQCSCQDYW 632
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF + + + WT+LI GY G + ++ +++ M ++ + ++A +
Sbjct: 177 RRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFH 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP----ERDVVS 121
+L ++ A+ D +V TM+ G L + + + + E D
Sbjct: 237 EAFALFDRMKAEN----NNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKL 292
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYA 179
T ++ Y G +E A +F+ LPL + +W M+ G + AI+ F+ M+
Sbjct: 293 TTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQ 352
Query: 180 GVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V D +T + +++ACA G+++ N+ + G P + ++D+ + G +
Sbjct: 353 RVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEP--RMEHFGCMVDLLGRAGMV 410
Query: 239 DDAYRIFVGM 248
+A ++ M
Sbjct: 411 PEARKLIDEM 420
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 327/550 (59%), Gaps = 27/550 (4%)
Query: 18 FLWTALIRG----YILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
F+W LIR + ++SLY MR + P T L ++ + G+Q
Sbjct: 25 FVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS---INTPHRGRQ 81
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+HAQ ILL G +D +V ++I MY CG +R+ FDE+ + D+ SW +I A A G
Sbjct: 82 LHAQ-ILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAG 140
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY---AGVETDYVTLVG 190
+ A LF+++P K+ ++W+ M+ GYV + + A+ F +Q + + + T+
Sbjct: 141 MIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSS 200
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM-K 249
V+SACA+LG +++ WV + +G +VV+G++LIDMY+KCGSI+ A IF +
Sbjct: 201 VLSACARLGALQHGKWVHAYIDKTGMK--IDVVLGTSLIDMYAKCGSIERAKCIFDNLGP 258
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC---- 305
+++V ++S+MI F+MHG + ++LF MV +PN VTF+ VL AC H GL
Sbjct: 259 EKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNE 318
Query: 306 --------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
YGVSP HY CMVDL RAG +E+A +V+ MP+EP+ +WGALL +IH
Sbjct: 319 YFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIH 378
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
+ E +IA L EL+P Y++LSN+YA G W +V +R L+++ G+KK PG S
Sbjct: 379 GDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSL 438
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
+E D GVI EF AGD +HP + L +++ RL+ GY+ N VL D+ +E K+ L
Sbjct: 439 VEVD-GVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFAL 497
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSEKLA+A+ L TSPG T+RI+KNLRIC DCH+ + S+ REI+VRD RFHHF
Sbjct: 498 SLHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHF 557
Query: 538 QDGKCSCGNY 547
++G CSC +Y
Sbjct: 558 KNGLCSCKDY 567
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 135/273 (49%), Gaps = 40/273 (14%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EG--IGPVSFTLSA 57
M R +F+Q+ KN W+ +I GY+ G K ++SL+ S++ EG + P FT+S+
Sbjct: 141 MIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSS 200
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PE 116
+ AC + + G+ +HA I G D+ +G ++I MY KCG + ++ +FD + PE
Sbjct: 201 VLSACARLGALQHGKWVHAY-IDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPE 259
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+DV++W+ +I A++ +G E E +E F RM
Sbjct: 260 KDVMAWSAMITAFSMHGLSE-------------------------------ECLELFARM 288
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
GV + VT V V+ AC G++ N + + G P+ + ++D+YS+
Sbjct: 289 VNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPM--IQHYGCMVDLYSRA 346
Query: 236 GSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
G I+DA+ + M + +V + +++ G +HG
Sbjct: 347 GRIEDAWNVVKSMPMEPDVMIWGALLNGARIHG 379
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ W+A+I + + G ++ + L+ M +G+ P + T A+ AC VS G +
Sbjct: 260 KDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEY 319
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELIVAYANNG 133
+ + G + + M+ +Y + G + + V MP E DV+ W L+ +G
Sbjct: 320 FKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHG 379
Query: 134 DMES---AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D+E+ A EL + A+ + Y + + RE + M+ G++
Sbjct: 380 DVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIK 431
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/557 (38%), Positives = 329/557 (59%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN WTA+I Y +G ++++L+ M R P FT + + +C
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L G+QIH+ I + S ++VG++++ MY K G ++ D
Sbjct: 205 LGFETGRQIHSIAIK-RNYESHMFVGSSLLDMYAKSG------RICD------------- 244
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A G+F+ LP +D VA TA+++GY Q EA++ F ++Q G+ ++
Sbjct: 245 ------------AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNS 292
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V++A + L + + V SG + VV+ ++LIDMYSKCG++ A RIF
Sbjct: 293 VTYASVLTALSGLAALNHGKQVHSHVLRSG--QYSYVVLLNSLIDMYSKCGNVCYARRIF 350
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSH---- 300
M +R S+++M++G++ HG A ++LF M + + KP+ +T++ VL+ CSH
Sbjct: 351 DSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLE 410
Query: 301 -VGLKCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+GL+ + G+ P HY C+VDLLGRAG +EEA ++KMP P +WG+LL
Sbjct: 411 DMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 470
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
G+C++H + EI I L ELEP+ GNY+ILSN+YASAG W+D+ +R L++ + K
Sbjct: 471 GSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTK 530
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D+ ++H F A D THP E+ + + +L + + DGY P+L VLYDV +E
Sbjct: 531 EPGRSWVELDQ-IVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEE 589
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K+++L+ HSEKLALAFGL+ T G T+R++KNLRIC DCH F S++ R +++RD
Sbjct: 590 QKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDK 649
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH+ G CSCG+YW
Sbjct: 650 NRFHNIVGGVCSCGDYW 666
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 14/240 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LIV Y + A +F+E+P K+ V+WTAM++ Y Q EA+ F M + E
Sbjct: 129 TRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 188
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ T ++++C + + IA + +++ VGS+L+DMY+K G I DA+
Sbjct: 189 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYE--SHMFVGSSLLDMYAKSGRICDAH 246
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV- 301
+F + +R+V + +++I G+A G A++LF + N VT+ VLTA S +
Sbjct: 247 GVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA 306
Query: 302 ----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + + + Y+ ++D+ + G + A ++ + MP E W A+L
Sbjct: 307 ALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP-ERTCISWNAML 365
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
E +M G E + +++ C I+ V + + P +V + + LI
Sbjct: 76 EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLP--SVYLRTRLIV 133
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
+Y+KC + DA +F M Q+NV S+++MI ++ G A A+ LF +M++++T+PN T
Sbjct: 134 LYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 193
Query: 291 FIGVLTAC 298
F +LT+C
Sbjct: 194 FATILTSC 201
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 320/557 (57%), Gaps = 47/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ W A+I GY+ G +++++ + M+ + P T+ ++ AC +
Sbjct: 213 RRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL 272
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ I + GF +L + N ++ MY KCG +G +RK+FD M +
Sbjct: 273 RSLELGKWI-GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED--------- 322
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
KD + W M+ GY + EA+ FE M V +
Sbjct: 323 ----------------------KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPND 360
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT + V+ ACA LG + WV + + G G +NNV + +++I MY+KCG ++ A +
Sbjct: 361 VTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQ 420
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M R++ S+++MI G AM+G A A+ LF +M+ +P+ +TF+GVL+AC+ G
Sbjct: 421 VFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGF 480
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K YG+SP HY CM+DLL R+G +EA ++ M +EP+G +WG+LL
Sbjct: 481 VELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLL 540
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH E + A LFELEP+ G Y++LSNIYA AG WDDV+++R L G+KK
Sbjct: 541 NACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKK 600
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG + +E D GV+HEF GD HP S I + L ++ L+ G+ P+ VLYD+ +E
Sbjct: 601 VPGCTSIEID-GVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEE 659
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ L HSEKLA+AFGL++T PG+T+RI+KNLR+C +CH S++ REI+ RD
Sbjct: 660 WKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDR 719
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC + W
Sbjct: 720 NRFHHFKDGFCSCNDRW 736
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 195/378 (51%), Gaps = 21/378 (5%)
Query: 3 SFPRLVFEQVKYKNP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
S+ +F + ++ P F+W LIR + L S+ L+ M G+ P S T +LFK
Sbjct: 76 SYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFK 135
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+C + +Q+HA + L +V ++I MY + G L +R VFD+ RD V
Sbjct: 136 SCAKSKATHEAKQLHAHALKLA-LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAV 194
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S+T LI Y + G ++ A LF+E+P KD V+W AM+ GYVQ+ + EA+ F RMQ A
Sbjct: 195 SFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEAD 254
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V + T+V V+SAC L ++ W+ GFG N+ + +AL+DMYSKCG I
Sbjct: 255 VSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFG--KNLQLVNALVDMYSKCGEIGT 312
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F GM+ ++V +++MI G+ A+ LF M++ PN VTF+ VL AC+
Sbjct: 313 ARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACAS 372
Query: 301 VG---------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
+G LK G + + ++ + + GC+E A ++ M +
Sbjct: 373 LGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLA 431
Query: 346 VWGALLGACQIHRNPEIA 363
W A++ ++ + E A
Sbjct: 432 SWNAMISGLAMNGHAERA 449
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 335/569 (58%), Gaps = 32/569 (5%)
Query: 6 RLVFEQV--KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+++ +K+ WT L+ ++ +++ ++ MRR G+ P TL LF C
Sbjct: 70 RKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCA 129
Query: 64 EVLDVSLGQQIHAQTIL--LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ DV +G Q H + LGG N ++ MY K G +G +R+VF EM + VVS
Sbjct: 130 RLGDVVVGAQGHGCMVKMGLGGVEK---ACNAVMDMYAKSGLMGEARRVFYEMKGQSVVS 186
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AG 180
WT ++ + + + +F+E+P +++VAWT M+ GY+ + +E+ M +
Sbjct: 187 WTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLE 246
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+E +YVTL +++AC+Q G + WV A + +N ++VG+A++DMY+KCG I
Sbjct: 247 MELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELN-IMVGTAMVDMYAKCGRIHI 305
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A++ F M QRNV S+++M+ G AMHG AA+ +F M K E KP+ VTF VL+ACSH
Sbjct: 306 AFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFK-EAKPDDVTFTSVLSACSH 364
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL YG++P +HYACMVDLLGRAG LEEA +V +MP+ PN V G
Sbjct: 365 SGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLG 424
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LLG+C IH ++ + L +L+P +I+LSN+YA AG + + +R++LK G
Sbjct: 425 SLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRG 484
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD- 467
+KK PG S + G +H+F AGD +HP + E+ L +++ RL+ GY PN +
Sbjct: 485 IKKVPGMSSIHVG-GQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAG 543
Query: 468 --------VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
V EEK++ L +HSEKLA+ FGL++T PG + I KNLRIC+DCH + S
Sbjct: 544 CDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVS 603
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ REIV+RD RFH F++G CSC +YW
Sbjct: 604 KIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 156/392 (39%), Gaps = 86/392 (21%)
Query: 44 RREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCG 102
R + VS L ++C + +G+++HA I G + ++ N ++ Y CG
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64
Query: 103 FLGCSRKVFDEMP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
+RKVFDE+P +D V WT L+ G F
Sbjct: 65 CAWQARKVFDEIPHSHKDTVDWTTLM-------------GCF------------------ 93
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG--VIKYANWVCEIAEGSGFGP 218
V++ EA+ F M+ GV+ D VTLV + CA+LG V+ C + G G
Sbjct: 94 VRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVK--MGLGG 151
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMK----------------------------- 249
+ +A++DMY+K G + +A R+F MK
Sbjct: 152 VEKAC--NAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDE 209
Query: 250 --QRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVG---- 302
+RN +++ MI G+ G + L +M+ E + N VT +LTACS G
Sbjct: 210 MPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMM 269
Query: 303 ---LKCYGVSPSTDHY-----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ Y + MVD+ + G + A K +KMP + N W A+L
Sbjct: 270 GRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMP-QRNVVSWNAMLSGL 328
Query: 355 QIHRNPEIAQIAANHLF-ELEPDKIGNYIILS 385
+H A +F E +PD + +LS
Sbjct: 329 AMHGLGRAALDIFPQMFKEAKPDDVTFTSVLS 360
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/584 (37%), Positives = 338/584 (57%), Gaps = 51/584 (8%)
Query: 7 LVFEQ-VKYKNPFLWTALIRGYILQGHLKDSISLYCS--MRREGIGPVSFTLSALFKACT 63
L+F + + N F + AL++ + +IS + + + P +T +++ KAC
Sbjct: 79 LIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACA 138
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ V GQ++H + G S+L+V N+++ +Y K G ++K+FDEM RDVVSW
Sbjct: 139 GLAQVLEGQKVHC-FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWN 197
Query: 124 ELIVAY-------------------------------ANNGDMESAGGLFNELPLKDKVA 152
LI Y A G++E A LF +P+++ V+
Sbjct: 198 TLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVS 257
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
W AM+ GY QN K +AIE F +MQ+ G+ + VTLV V+SACA LG + W+
Sbjct: 258 WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFI 317
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
+ + +G+AL DMY+KCG + +A +F M +R+V S+S +I+G AM+G A+
Sbjct: 318 RRNKIEV--GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANE 375
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMV 319
A F +M++ +PN ++F+G+LTAC+H GL + YG++P +HY C+V
Sbjct: 376 AFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVV 435
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
DLL RAG L++A ++ MP++PN VWGALLG C+I+++ E + + EL+ + G
Sbjct: 436 DLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSG 495
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
+ + L+N+YAS G DD + R ++ K PG SW+E + V +EF GD +HP S
Sbjct: 496 SLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSV-YEFFMGDSSHPQSL 554
Query: 440 EIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
I + +L +++ GY+P V++++ +EEK+ L THSEKLALAFGL+ TS G T+
Sbjct: 555 RIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTI 614
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
RI+KNLR+C DCH + S+++ REIVVRD RFHHF+DGKCS
Sbjct: 615 RIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 330/568 (58%), Gaps = 57/568 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM---RREGIGPV------SF 53
S R++F+++ +N WT+LI GY+ +++ ++ + EG G S
Sbjct: 134 SNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
+ ++ AC+ V + ++ + +H I +G + V NT++ Y KCG + SRKV
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVG-LDKVMGVENTLLDAYAKCGEVSLSRKV--- 249
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
F+++ KD V+W +M+ Y QN +A E F
Sbjct: 250 ----------------------------FDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVF 281
Query: 174 ERMQYAGV-ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
M AG + + VTL ++ ACA G ++ +C + G +NNV++ +++IDMY
Sbjct: 282 HGMLKAGGGKYNEVTLSTLLLACAHEGALRVG--MCLHDQVIKMGYVNNVIMATSIIDMY 339
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
KCG + A F GMK++NV S+++MI G+ MHG A A+ +F M+ KPN +TFI
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFI 399
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
VL ACSH G Y V P +HY CMVDLLGRAG ++EA +++ M V
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
+ +WG+LL AC+IH++ E+A+I+A LF+L+P G Y++L+NIYA AG W DV R+
Sbjct: 460 RRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERM 519
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R L+K GL K PGYS +E +G +H F GD HP +I + L +L +LQ GY PN
Sbjct: 520 RILVKDRGLVKPPGYSLVEL-KGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPN 578
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ SVL+DV +EEK+ I+ HSEKLA+AFG++ + PG+T+ ++KNLR+C DCH + S+
Sbjct: 579 MASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISK 638
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ REI+VRD RFHHF+DG CSCG+YW
Sbjct: 639 IVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 34/290 (11%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+ W +LI G +S+ + MR+ I P T K+C+ + D++ G+Q H Q
Sbjct: 48 YSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQ 107
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
++ G F SDL+V + +I MY KCG L +R +FDE+P R++V+WT LI Y N D
Sbjct: 108 ALVFG-FESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHE 166
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM----QYAGVETDYVTLVGVIS 193
A +F E FE+ + G D V ++ V+S
Sbjct: 167 ALMVFKEF--------------------------LFEKSEGNGEEVGTSVDSVAMISVLS 200
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
AC+++ + V +A G + V + L+D Y+KCG + + ++F M +++V
Sbjct: 201 ACSRVSNKAVSEGVHGVAIKVGLDKVMG--VENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVG 302
S++SMI +A +G + A ++F M+K K N VT +L AC+H G
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 322/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R ++ + K+ W ALI GY G D++SL+ M E I TLS + K+ +
Sbjct: 339 RRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL 398
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + +QIH +I G SD YV N+++ Y KC + + K+F+E +W +L
Sbjct: 399 QAIKVCKQIHTISIK-SGIYSDFYVINSLLDTYGKCNHIDEASKIFEER------TWEDL 451
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
VA+T+M+T Y Q EA++ + +MQ A ++ D
Sbjct: 452 -------------------------VAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDP 486
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+++ACA L + + FG + ++ ++L++MY+KCGSI+DA R F
Sbjct: 487 FICSSLLNACANLSAYEQGKQLH--VHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAF 544
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
+ R + S+S+MI G+A HG A++LF M++ PN +T + VL AC+H GL
Sbjct: 545 SEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVN 604
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ P+ +HYACM+DLLGR+G L EA+++V +P E +G VWGALLGA
Sbjct: 605 EGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGA 664
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH+N E+ Q AA LF+LEP+K G +++L+NIYASAGMW++V++VR+ +K + +KK P
Sbjct: 665 ARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEP 724
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + ++ F GD +H S EI L L D L GY + +++V EK
Sbjct: 725 GMSWIE-IKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEK 783
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L HSEKLA+AFGL+ T PG +R+ KNLRIC DCH F +++ REI+VRD R
Sbjct: 784 EKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINR 843
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 844 FHHFKDGSCSCGDYW 858
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 50/363 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + + + W A+I G +L ++ L M+ G P FTLS+ KAC +
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG+Q+H+ I + SDL+ ++ MY KC + +R+ +D MP+
Sbjct: 300 KELGRQLHSSLIKMDAH-SDLFAAVGLVDMYSKCEMMDDARRAYDSMPK----------- 347
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD +AW A+++GY Q +A+ F +M ++ + T
Sbjct: 348 --------------------KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ + A L IK + I+ SG ++ V ++L+D Y KC ID+A +IF
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGI--YSDFYVINSLLDTYGKCNHIDEASKIFEE 445
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
++ +Y+SMI ++ +G A++L+ M + KP+ +L AC+
Sbjct: 446 RTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG 505
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV--WGALLGAC 354
HV +G +V++ + G +E+A + ++ PN G+ W A++G
Sbjct: 506 KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEI---PNRGIVSWSAMIGGY 562
Query: 355 QIH 357
H
Sbjct: 563 AQH 565
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 173/359 (48%), Gaps = 46/359 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R + ++ + W++L+ GY+ G +++++ ++ M G+ FT ++ KAC+
Sbjct: 34 YARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACS 93
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
D+++G+++H ++ G F SD +V NT++ MY KCG L SR++F + ER+VVSW
Sbjct: 94 MKRDLNMGRKVHGMAVVTG-FESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSW- 151
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
A+ + YVQ+ EA+ F+ M +G+
Sbjct: 152 ------------------------------NALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ ++ +++ACA L + + G + +AL+DMYSK G I+ A
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDL--DQFSANALVDMYSKAGEIEGAVA 239
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F + +V S++++I G +H A+ L +M + T+PN T L AC+ +G
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299
Query: 304 KCYG---------VSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K G + +D +A +VD+ + +++A + + MP + + W AL+
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALI 357
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 46/302 (15%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
++HA I G F+ D + N ++ +Y KC G +RK+ DE E DVVS
Sbjct: 2 ELHAHLIKFG-FSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVS----------- 49
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
W+++++GYVQN EA+ F M GV+ + T V+
Sbjct: 50 --------------------WSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVL 89
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
AC+ + V +A +GF ++ V + L+ MY+KCG +DD+ R+F G+ +RN
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFE--SDGFVANTLVVMYAKCGLLDDSRRLFGGIVERN 147
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKCYG 307
V S++++ + A+ LF +MV++ PN + +L AC+ +G K +G
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207
Query: 308 V----SPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+ D ++ +VD+ +AG +E A+ + + + P+ W A++ C +H +
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDI-AHPDVVSWNAIIAGCVLHDCND 266
Query: 362 IA 363
+A
Sbjct: 267 LA 268
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 316/557 (56%), Gaps = 50/557 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
RL+F+++ ++ W A+I G Q ++++SL+ M+REG P + T + A +
Sbjct: 578 ARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVD 637
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +++H+ G DL VGN ++ Y KCG + +++V
Sbjct: 638 EEALEWVKEVHSHATDAG--LVDLRVGNALVHTYSKCGNVKYAKQV-------------- 681
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F+++ ++ WT M+ G Q+ +A +F +M G+ D
Sbjct: 682 -----------------FDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPD 724
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T V ++SACA G ++ WV E+ + G ++++ VG+AL+ MY+KCGSIDDA
Sbjct: 725 ATTYVSILSACASTGALE---WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARS 781
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +R+VFS++ MI G A HGR A+ F M KPNG +++ VLTACSH GL
Sbjct: 782 VFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGL 841
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG+ P+ +HY CMVDLLGRAG LEEA + MP+EP+ WGALL
Sbjct: 842 VDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALL 901
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC + N E+A+ AA +L+P Y++LSNIYA+ G W+ VR +++ G++K
Sbjct: 902 GACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRK 961
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D IH F GD +HP S EI L DL++RL+A GY P+ R VL + E
Sbjct: 962 EPGRSWIEVDNR-IHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQE 1020
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K++ L +HSEKLA+ +GL+ T +R+ KNLR+C DCH S++ GREIV RD
Sbjct: 1021 HKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDA 1080
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 1081 KRFHHFKDGVCSCGDYW 1097
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 34/295 (11%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+++ KN ++WT +I GY GH +D++ +Y MR+E P T ++ KAC
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+++ G++IHA I+ GF SD+ V ++ MYVKCG + ++ +FD+M ER+V+SW
Sbjct: 232 PVNLKWGKKIHAH-IIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW-- 288
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
T M+ G + +EA F +MQ G +
Sbjct: 289 -----------------------------TVMIGGLAHYGRGQEAFHLFLQMQREGFIPN 319
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V +++A A G +++ V A +G ++ VG+AL+ MY+K GSIDDA +
Sbjct: 320 SYTYVSILNANASAGALEWVKEVHSHAVNAGLAL--DLRVGNALVHMYAKSGSIDDARVV 377
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
F GM +R++FS++ MI G A HGR A LF M + PN T++ +L A +
Sbjct: 378 FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 170/369 (46%), Gaps = 52/369 (14%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
+L+F+++ +N WT +I G G +++ L+ M+REG P S+T ++ A
Sbjct: 273 AQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANAS 332
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +++H+ + G DL VGN ++ MY K G + +R V
Sbjct: 333 AGALEWVKEVHSHAVN-AGLALDLRVGNALVHMYAKSGSIDDARVV-------------- 377
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F+ + +D +WT M+ G Q+ + +EA F +MQ G +
Sbjct: 378 -----------------FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPN 420
Query: 185 YVTLVGVI--SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T + ++ SA A +++ V + AE +GF I+++ +G+ALI MY+KCGSIDDA
Sbjct: 421 LTTYLSILNASAIASTSALEWVKVVHKHAEEAGF--ISDLRIGNALIHMYAKCGSIDDAR 478
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F GM R+V S+++M+ G A +G H A +F M + P+ T++ +L +H
Sbjct: 479 LVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN--THGS 536
Query: 303 LKCYGVSPSTDHYACMVDLLG-------------RAGCLEEALKMVEKMPVEPNGGVWGA 349
+A L+ R G +++A + +K+ V + W A
Sbjct: 537 TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR-HVTTWNA 595
Query: 350 LLGACQIHR 358
++G R
Sbjct: 596 MIGGAAQQR 604
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 209/507 (41%), Gaps = 106/507 (20%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT----LSALFK 60
R+VF+ + ++ F WT +I G G +++ SL+ M+R G P T L+A
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A T L+ HA+ GF SDL +GN +I MY KCG + +R VFD M +
Sbjct: 434 ASTSALEWVKVVHKHAEE---AGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD---- 486
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+D ++W AM+ G QN EA F +MQ G
Sbjct: 487 ---------------------------RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T + +++ +++ N V + A +G I++ VGSA I MY +CGSIDD
Sbjct: 520 LVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL--ISDFRVGSAFIHMYIRCGSIDD 577
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT---- 296
A +F + R+V ++++MI G A A+ LF M + P+ TFI +L+
Sbjct: 578 ARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVD 637
Query: 297 --------------------------ACSHVGLKCYGVSPSTDHYACMVDL--------- 321
A H KC V + + MV+
Sbjct: 638 EEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMI 697
Query: 322 --LGRAGCLEEALKMVEKMPVE---PNGGVWGALLGACQIHRNPEIAQIAANHLFE--LE 374
L + GC +A +M E P+ + ++L AC E + NH L
Sbjct: 698 GGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLV 757
Query: 375 PD-KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
D ++GN ++ ++YA G DD V + + +SW G+ R
Sbjct: 758 SDLRVGNALV--HMYAKCGSIDDARSV-----FDDMVERDVFSWTVMIGGLAQHGRG--- 807
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPN 460
+AL D +++++G++PN
Sbjct: 808 --------LEAL-DFFVKMKSEGFKPN 825
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
Query: 34 KDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
KD++++ ++GI SF+ + + C + D+ L +Q+H I+ G +LYV N
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV-CIIKSGMEQNLYVANK 158
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ +Y++CG L C+R+V F++L K+ W
Sbjct: 159 LLRVYIRCGRLQCARQV-------------------------------FDKLLKKNIYIW 187
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
T M+ GY + +A+ +++M+ + + +T + ++ AC +K+ +
Sbjct: 188 TTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQ 247
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
SGF ++V V +AL++MY KCGSI+DA IF M +RNV S++ MI G A +GR A
Sbjct: 248 SGFQ--SDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAF 305
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVG 302
LF M + PN T++ +L A + G
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAG 334
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + VF+ + +N WT +I G G D+ S + M REGI P + T ++ AC
Sbjct: 677 YAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACA 736
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +++H + G SDL VGN ++ MY KCG + +R VFD+M ERDV SW
Sbjct: 737 STGALEWVKEVHNHAVS-AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSW- 794
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
T M+ G Q+ + EA+++F +M+ G +
Sbjct: 795 ------------------------------TVMIGGLAQHGRGLEALDFFVKMKSEGFKP 824
Query: 184 DYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ + V V++AC+ G++ + + G P + ++D+ + G +++A
Sbjct: 825 NGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHY--TCMVDLLGRAGLLEEAE 882
Query: 243 RIFVGM 248
+ M
Sbjct: 883 LFILNM 888
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 31/255 (12%)
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVV 223
++A+ + G+ D + V ++ C + I A V C I G N+
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGME----QNLY 154
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
V + L+ +Y +CG + A ++F + ++N++ +++MI G+A +G A A++++ M +
Sbjct: 155 VANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQEC 214
Query: 284 TKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
+PN +T++ +L AC H + G +V++ + G +E+A
Sbjct: 215 GQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQ 274
Query: 333 KMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFELEPDKIG------NYIILS 385
+ +KM VE N W ++G + R E A HLF L+ + G Y+ +
Sbjct: 275 LIFDKM-VERNVISWTVMIGGLAHYGRGQE-----AFHLF-LQMQREGFIPNSYTYVSIL 327
Query: 386 NIYASAGMWDDVSRV 400
N ASAG + V V
Sbjct: 328 NANASAGALEWVKEV 342
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/561 (41%), Positives = 325/561 (57%), Gaps = 53/561 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF+++ FLW L +GY+ +S+ LY MR G+ P FT + KA +
Sbjct: 61 YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAIS 120
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ D S G +HA VK GF GC V T
Sbjct: 121 QLGDFSCGFALHAHV--------------------VKYGF-GCLGIV-----------AT 148
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
EL++ Y G++ SA LF + +KD VAW A + VQ A+EYF +M V+
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAY 242
D T+V ++SAC QLG ++ EI + + I+ N++V +A +DM+ KCG+ + A
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGE---EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F MKQRNV S+S+MI+G+AM+G + A+ LF M +PN VTF+GVL+ACSH G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 303 LKCYG--------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L G + P +HYACMVDLLGR+G LEEA + ++KMPVEP+ G+WG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNY-IILSNIYASAGMWDDVSRVRRLLKMT 407
ALLGAC +HR+ + Q A+ L E PD IG+Y ++LSNIYA+AG WD V +VR ++
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G KK YS +E + G IH F GD +HP S I + L ++L +++ GY P+ SV +D
Sbjct: 445 GTKKVAAYSSVEFE-GKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHD 503
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V EEK+ L HSEKLA+AFGL+ PG +R+MKNLR C+DCH F S + EI+
Sbjct: 504 VEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEII 563
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFHHF++G CSC +W
Sbjct: 564 MRDKNRFHHFRNGVCSCKEFW 584
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 39/250 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +FE ++ K+ W A + + G+ ++ + M + + SFT+ ++ AC
Sbjct: 161 SSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + +G++I+ + ++ V N + M++KCG +R +F+EM +R+VVSW
Sbjct: 221 GQLGSLEIGEEIYDRA-RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ +IV YA NGD REA+ F MQ G+
Sbjct: 280 STMIVGYAMNGD-------------------------------SREALTLFTTMQNEGLR 308
Query: 183 TDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+YVT +GV+SAC+ G++ +Y + + + + P + ++D+ + G +
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ-SNDKNLEPRKEHY--ACMVDLLGRSGLL 365
Query: 239 DDAYRIFVGM 248
++AY M
Sbjct: 366 EEAYEFIKKM 375
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ GDM A +F+E+ W + GYV+N P E++ +++M+ GV
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGS-----GFGPINNVVVGSALIDMYSKCGS 237
D T V+ A +QLG ++ C A + GFG + +V + L+ MY K G
Sbjct: 107 PDEFTYPFVVKAISQLG-----DFSCGFALHAHVVKYGFGCLG--IVATELVMMYMKFGE 159
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ A +F M+ +++ ++++ + G + A++ F M + + T + +L+A
Sbjct: 160 LSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 298 CSHVG 302
C +G
Sbjct: 220 CGQLG 224
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 323/561 (57%), Gaps = 49/561 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF++ + + ++W AL R L GH ++ + LY M R G+ FT + + KAC
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 64 ----EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
V + G++IHA + G++S +Y+ T++ MY + G + + VF MP R+V
Sbjct: 190 ASECTVNHLMKGKEIHAH-LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSW+ +I YA NG A F E+ + K ++ P
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETK------------DSSP------------- 283
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ VT+V V+ ACA L ++ + G I V+ SAL+ MY +CG ++
Sbjct: 284 ----NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLE 337
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
R+F M R+V S++S+I + +HG AIQ+F +M+ P VTF+ VL ACS
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +G+ P +HYACMVDLLGRA L+EA KMV+ M EP VW
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVW 457
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LLG+C+IH N E+A+ A+ LF LEP GNY++L++IYA A MWD+V RV++LL+
Sbjct: 458 GSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GL+K PG W+E R ++ F + D +P +I L L + ++ GY P + VLY+
Sbjct: 518 GLQKLPGRCWMEVRRK-MYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK+RI++ HSEKLALAFGL+ TS G +RI KNLR+CEDCHLF S+ + +EI+
Sbjct: 577 LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFH F++G CSCG+YW
Sbjct: 637 VRDVNRFHRFKNGVCSCGDYW 657
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 329/555 (59%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ WT +IRGY +++D+ L+ +M+ EGI P T + AC
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+SL ++IH+Q ++ GF +DL V ++ MY KCG + +R+V
Sbjct: 378 ADLSLAREIHSQ-VVRAGFGTDLLVDTALVHMYAKCGAIKDARQV--------------- 421
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ + +D V+W+AM+ YV+N EA E F M+ VE D
Sbjct: 422 ----------------FDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + +++AC LG + + A + ++++ VG+ALI+M K GSI+ A IF
Sbjct: 466 VTYINLLNACGHLGALDLGMEIYTQAIKADL--VSHIPVGNALINMNVKHGSIERARYIF 523
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M QR+V +++ MI G+++HG A A+ LF M+K +PN VTF+GVL+ACS G
Sbjct: 524 ENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVE 583
Query: 303 ---------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
L G+ P+ + Y CMVDLLGRAG L+EA ++ +MP++PN +W LL A
Sbjct: 584 EGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+I+ N ++A+ AA EP Y+ LS++YA+AGMW++V++VR++++ G++K
Sbjct: 644 CRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQ 703
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G +W+E + G +H F D +HP + EI L L+ ++ +GY P ++VL++V ++EK
Sbjct: 704 GCTWIEVE-GKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEK 762
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+A+G+L+ GA +RI KNLR+C DCH S+V GREI+ RD R
Sbjct: 763 EEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASR 822
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 823 FHHFKNGVCSCGDYW 837
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 197/439 (44%), Gaps = 85/439 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+ V+ K W A+I GY GH+K++ +L+ M E + P T + AC+
Sbjct: 116 RQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSP 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVG-------------------------------NTM 94
+ LG++ HAQ I +G F SD +G N M
Sbjct: 176 AGLKLGKEFHAQVIKVG-FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVM 234
Query: 95 IGMYVKCGFLGCSRKVFDEM------PER------------------------------- 117
IG Y K G + ++F M P R
Sbjct: 235 IGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGL 294
Query: 118 --DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
DV T LI Y G +E A +F+++ ++D V+WT M+ GY +N+ +A F
Sbjct: 295 VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFAT 354
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
MQ G++ D +T + +I+ACA + A + +GFG +++V +AL+ MY+KC
Sbjct: 355 MQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFG--TDLLVDTALVHMYAKC 412
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G+I DA ++F M +R+V S+S+MI + +G A + F M + +P+ VT+I +L
Sbjct: 413 GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLL 472
Query: 296 TACSH-----VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC H +G++ Y + D + ++++ + G +E A + E M V+ +
Sbjct: 473 NACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDV 531
Query: 345 GVWGALLGACQIHRNPEIA 363
W ++G +H N A
Sbjct: 532 VTWNVMIGGYSLHGNAREA 550
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 52/365 (14%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
S T LF+ C + D LG+Q+ I+ G ++Y NT+I ++ CG + +R+ F
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDH-IIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D + + VV+ W A++ GY Q +EA
Sbjct: 120 DSVENKTVVT-------------------------------WNAIIAGYAQLGHVKEAFA 148
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F +M +E +T + V+ AC+ +K GF +++ +G+AL+ M
Sbjct: 149 LFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF--VSDFRIGTALVSM 206
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y K GS+D A ++F G+ +R+V +++ MI G+A G A QLF M + KPN ++F
Sbjct: 207 YVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISF 266
Query: 292 IGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+ +L CS H G+ ++ + G +E A ++ +KM V
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326
Query: 341 EPNGGVWGALLGACQIHRNPEIA--QIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
+ W ++ + N E A A ++PD+I YI + N AS+ D+S
Sbjct: 327 R-DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRI-TYIHIINACASSA---DLS 381
Query: 399 RVRRL 403
R +
Sbjct: 382 LAREI 386
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 339/595 (56%), Gaps = 60/595 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ + ++ + +I G+ G ++ ++ M++EG+ P +T ++ ACT++
Sbjct: 109 RVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQL 168
Query: 66 LDVSLGQQIHAQTIL--LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
LD+ G+QIH + I+ LGG +++V N + +Y +CG + +R++FD M R+VV+W
Sbjct: 169 LDLRRGKQIHGRIIICNLGG---NVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWN 225
Query: 124 ELIVAYANN-----------------------------------GDMESAGGLFNELPLK 148
+I Y N G ++ A +F E+ K
Sbjct: 226 LMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREK 285
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
D+V WT M+ G QN K +A+ F M D T+ V+S+CA+L + +
Sbjct: 286 DEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHG---- 341
Query: 209 EIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
++ G F G ++++V SAL+DMY KCG DA+ IF M+ RNV S++SMI G+A++
Sbjct: 342 QVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALN 401
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDH 314
G+ A+ L+ +M++ KP+ VTF+GVL+AC H GL +G+ P+ DH
Sbjct: 402 GQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDH 461
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
YACMV+L GR+G +++A+ ++ M EPN +W +L C + + + ++AA L EL
Sbjct: 462 YACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELN 521
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT 434
P YI+LSN+YA+ G W DV+ +R L+K +KK YSW+E D V H+F A D T
Sbjct: 522 PFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEV-HKFVADDRT 580
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS 494
HP++ I L L+ +LQ G+ PN VL+D ++EK + HSEKLALA+GL+
Sbjct: 581 HPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKP 640
Query: 495 PGAT-VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G T +RI+KN+R C DCH+FM S + R +++RD+ RFHHF +GKCSC +YW
Sbjct: 641 HGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 159/317 (50%), Gaps = 13/317 (4%)
Query: 49 GPVSFT-LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
GP S + L C DV +++ + L +D ++ N ++ +Y K G + +
Sbjct: 18 GPASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHA 77
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
RK+FDEM +RD SW ++ YA +G +E +F+ +P +D V++ +++G+ N +
Sbjct: 78 RKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGG 137
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
A+ F RMQ G++ T V V++AC QL ++ + G NV V +A
Sbjct: 138 PALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLG--GNVFVCNA 195
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L D+Y++CG ID A R+F M RNV +++ MI G+ + + I LF +M + KP+
Sbjct: 196 LTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPD 255
Query: 288 GVTFIGVLTACSHVGL-----KCYGVSPSTDHYACMVDLLGRA--GCLEEALKMVEKMPV 340
VT VL A G K +G D + ++G A G E+AL + +M +
Sbjct: 256 QVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLL 315
Query: 341 E---PNGGVWGALLGAC 354
E P+G +++ +C
Sbjct: 316 ENARPDGYTISSVVSSC 332
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/537 (40%), Positives = 311/537 (57%), Gaps = 49/537 (9%)
Query: 26 GYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFT 85
GY+ ++ I +Y M + + P FT L +AC + G+QIHA +L GF
Sbjct: 68 GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAH-VLKFGFG 126
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
+D + N +I MYV N +E A +F+ +
Sbjct: 127 ADGFSLNNLIHMYV-------------------------------NFQSLEQARRVFDNM 155
Query: 146 PLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKY 203
P +D+ V+W AM+ YVQ+ + EA F+RM+ V D ++SAC LG ++
Sbjct: 156 PQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 215
Query: 204 ANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGF 263
W+ E SG + + + +IDMY KCG ++ A +F + Q+ + S++ MI G
Sbjct: 216 GKWIHGYIEKSGIEL--DSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGL 273
Query: 264 AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPS 311
AMHG+ AAI+LF +M + P+G+TF+ VL+AC+H GL + G+ P
Sbjct: 274 AMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPG 333
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
+H+ CMVDLLGRAG LEEA K++ +MPV P+ GV GAL+GAC+IH N E+ + +
Sbjct: 334 MEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVI 393
Query: 372 ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAG 431
ELEP G Y++L+N+YASAG W+DV++VR+L+ G+KK PG+S +E + GV EF AG
Sbjct: 394 ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGV-DEFIAG 452
Query: 432 DLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLL 491
HP + EI L ++L+ +++ GY P+ VL+D+ +EEK+ L HSEKLA+AFGLL
Sbjct: 453 GRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLL 512
Query: 492 TTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
T PG T+RI KNLRIC DCH S+V REI++RD RFHHF+ G CSC +YW
Sbjct: 513 KTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 6 RLVFEQV--KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ + + +N W A+I Y+ L ++ +L+ MR E + F +++ ACT
Sbjct: 149 RRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT 208
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ IH I G D + T+I MY KCG L + +VF+E+P++ + SW
Sbjct: 209 GLGALEQGKWIHG-YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWN 267
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A +G E+ AIE F+ M+ V
Sbjct: 268 CMIGGLAMHGKGEA-------------------------------AIELFKEMEREMVAP 296
Query: 184 DYVTLVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D +T V V+SACA G+++ Y ++ E+ G P + ++D+ + G ++
Sbjct: 297 DGITFVNVLSACAHSGLVEEGKHYFQYMTEVL---GLKP--GMEHFGCMVDLLGRAGLLE 351
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+A ++ M + +++ +HG Q+ +++ E +G
Sbjct: 352 EARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 401
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 158 TGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG 217
+GY++ R I + RM + V + T +I AC I+ + GFG
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 218 ----PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ--RNVFSYSSMILGFAMHGRAHA 271
+NN LI MY S++ A R+F M Q RN S+++MI + R H
Sbjct: 127 ADGFSLNN------LIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHE 180
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVD 320
A LF M + +L+AC+ +G ++ G+ + ++D
Sbjct: 181 AFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVID 240
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF-ELE----- 374
+ + GCLE+A ++ ++P + W ++G +H E AA LF E+E
Sbjct: 241 MYCKCGCLEKASEVFNELP-QKGISSWNCMIGGLAMHGKGE----AAIELFKEMEREMVA 295
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW------LEGDRGVIHEF 428
PD I +LS S + + + + ++ GLK PG L G G++ E
Sbjct: 296 PDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLK--PGMEHFGCMVDLLGRAGLLEEA 353
Query: 429 R 429
R
Sbjct: 354 R 354
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/630 (35%), Positives = 346/630 (54%), Gaps = 88/630 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F Q++ +PF+ +IRGY + +++SLY M G+ ++T + AC
Sbjct: 62 NYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAAC 121
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC---------------- 106
+ V LG++ H + +L GF SDL+V N +I Y CG GC
Sbjct: 122 ARLGAVKLGRRFHCE-VLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTW 180
Query: 107 ------------SRKVFDEMPER--------DVVSWTELIVAYANNG------------- 133
S K FD + E D V+ L+ A A G
Sbjct: 181 NIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSK 240
Query: 134 ----------------------DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D+ESA +FN + KD ++WT+M++G ++ +EA+
Sbjct: 241 ELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALA 300
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F++MQ +E D +TLVGV+SACAQ G + ++ + + F ++V+ +AL+DM
Sbjct: 301 LFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDK--FEINCDLVLETALVDM 358
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+KCGSID A ++F M+ RNVF+++++I G AMHG AI LF M + P+ VTF
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418
Query: 292 IGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
I +L ACSH GL + + P +HY C+VDLL RA +++AL +E MP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
++ N +W LLGAC+ + ++A+ + ELEPD G Y++LSN+YA WD +
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG-YQ 458
+R+ +K G++K PG SW+E + G+IH+F AGD +H + +I + ++ R+ DG +
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELN-GMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHV 597
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P +VL+D+ +EEK+ L HSEKLA+A GL++T G+ +RI+KNLR+C DCH F+
Sbjct: 598 PGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVT 657
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+V REIV RD RFHHF++G CSC ++W
Sbjct: 658 SKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+A +++GD+ A LF ++ D M+ GY ++ P EA+ + M GV D
Sbjct: 52 FLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDN 111
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V++ACA+LG +K + CE+ + +GFG +++ V +ALI Y CGS A +
Sbjct: 112 YTYPFVLAACARLGAVKLGRRFHCEVLK-NGFG--SDLFVINALIQFYHNCGSFGCACDV 168
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVG 302
F R+V +++ MI G + A L +M K + +P+ VT + ++ AC+ +G
Sbjct: 169 FDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG 227
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 321/555 (57%), Gaps = 46/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE++ ++N +WT++I GY+ +++ LY M +G P T++ L AC E+
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ +G ++H+ I +G+ ++ MY KCG L +R+VFD++ ++DV +W+ L
Sbjct: 194 KDLGVGMKLHSH-IREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSAL 252
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y N A LF E V G N +P E
Sbjct: 253 IFGYVKNNRSTEALQLFRE------------VAGG-SNMRPNE----------------- 282
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ VISACAQLG ++ WV + + G ++V + ++LIDM+SKCG ID A RIF
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKG--HSVSLNNSLIDMFSKCGDIDAAKRIF 340
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +++ S++SM+ G A+HG A+ F M T+ +P+ +TFIGVLTACSH GL
Sbjct: 341 DSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQ 400
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YGV ++HY CMVDLL RAG L EA + + MP++P+G +WG++LGA
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+++ N E+ + AA L ELEP G YI+LSNIYA MW++V +VR L+ G++K P
Sbjct: 461 CRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTP 520
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S + D + H F AGD +HP EI L + ++L+ GY + VL ++ D +K
Sbjct: 521 GCSSVVID-NIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKK 579
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLAL +GLL + G + I+KNLR+C DCH + S++ R+I +RD R
Sbjct: 580 EESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNR 639
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 640 FHHFKDGSCSCRDYW 654
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 58/390 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
VF + + W +++R ++ + ++ Y M R P FT +L K C +L
Sbjct: 34 VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +G+ +H Q + SDLY+ T++ MY CG
Sbjct: 94 EFKVGKVLHGQVVKYM-LHSDLYIETTLLNMYAACG------------------------ 128
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D++SA LF + ++KV WT+M++GY++N P EA+ +++M+ G D V
Sbjct: 129 -------DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 187 TLVGVISACAQ---LGV-IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T+ ++SACA+ LGV +K + + E+ V+GSAL++MY+KCG + A
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKIC------AVLGSALVNMYAKCGDLKTAR 235
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHV 301
++F + ++V+++S++I G+ + R+ A+QLF ++ + +PN VT + V++AC+ +
Sbjct: 236 QVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295
Query: 302 G-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G + Y H ++D+ + G ++ A ++ + M + + W ++
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSM 354
Query: 351 LGACQIH--RNPEIAQIAANHLFELEPDKI 378
+ +H +AQ +L+PD+I
Sbjct: 355 VNGLALHGLGREALAQFHLMQTTDLQPDEI 384
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 20/243 (8%)
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGVETDYVTLVGVISACA 196
A +F + D + W +M+ +V + PR A++ Y E ++ + D T ++ CA
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 197 QLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
L K V ++ G + +++ + + L++MY+ CG + A +F M RN
Sbjct: 91 LLLEFK----VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKV 146
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVS 309
++SMI G+ + + A+ L+ M + P+ VT +++AC+ VG+K +
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206
Query: 310 PSTDHYAC------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEI 362
D C +V++ + G L+ A ++ +++ + + W AL+ G + +R+ E
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYAWSALIFGYVKNNRSTEA 265
Query: 363 AQI 365
Q+
Sbjct: 266 LQL 268
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 328/562 (58%), Gaps = 52/562 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALF---- 59
F R VF +K+ + W ++I ++S++L+ + EG+ P FTL+++
Sbjct: 339 FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATA 398
Query: 60 -KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
KAC ++ + G+QIHA I GF SDL+V + ++ MY+KCG
Sbjct: 399 AKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCG---------------- 441
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
DM +AG +FN + D VAWT+M++G V N +A+ + RM+
Sbjct: 442 ---------------DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 486
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ V D T +I A + + ++ + A +++ VG++L+DMY+KCG+I
Sbjct: 487 SRVMPDEYTFATLIKASSCVTALEQGRQLH--ANVIKLDCVSDPFVGTSLVDMYAKCGNI 544
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+DAYR+F M RN+ +++M++G A HG A A+ LF M +P+ V+FIG+L+AC
Sbjct: 545 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 604
Query: 299 SHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL YG+ P +HY+C+VD LGRAG ++EA K++E MP + + +
Sbjct: 605 SHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASI 664
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
ALLGAC+I + E + A LF LEP Y++LSNIYA+A WDDV+ R+++K
Sbjct: 665 NRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKR 724
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+KK+PG+SW++ + ++H F D +HP + I + +++ ++ DGY P+ VL
Sbjct: 725 KNVKKDPGFSWIDV-KNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLL 783
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV DEEK+R L HSEKLA+A+GL++T T+R++KNLR+C DCH + S+V REI
Sbjct: 784 DVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREI 843
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
V+RD RFHHF+DG CSCG+YW
Sbjct: 844 VLRDANRFHHFRDGVCSCGDYW 865
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 188/404 (46%), Gaps = 63/404 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC--T 63
RL+F+ ++ ++ LW +++GY+ G K++ L+ R G+ P F++ + C
Sbjct: 238 RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWA 297
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
D+ LG+Q+H + G SD+ V N+++ MY K G +R+VF++M D++SW
Sbjct: 298 GTDDLELGKQVHGIAVK-SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISW- 355
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+M++ Q++ E++ F + + G++
Sbjct: 356 ------------------------------NSMISSCAQSSLEEESVNLFIDLLHEGLKP 385
Query: 184 DYVTLVGVI-----SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ TL + AC L ++ + A +GF +++ V S ++DMY KCG +
Sbjct: 386 DHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD--SDLHVNSGILDMYIKCGDM 443
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A +F + + +++SMI G +G A++++ M ++ P+ TF ++ A
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503
Query: 299 SHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
S V G + + D + +VD+ + G +E+A ++ +KM V N +W
Sbjct: 504 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALW 562
Query: 348 GALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILS 385
A+L H N E A +LF+ +EPD++ ILS
Sbjct: 563 NAMLVGLAQHGNAE----EAVNLFKSMKSHGIEPDRVSFIGILS 602
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L + ++ LG+ HA+ I++ G D ++ N ++ MY KCG L +R+VFD PER
Sbjct: 83 LLRTAISTHNLLLGKCTHAR-IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER 141
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+V+W ++ AYA + D + +E + F ++
Sbjct: 142 DLVTWNAILGAYAASVDS--------------------------NDGNAQEGLHLFRLLR 175
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG--FGPINNVVVGSALIDMYSKC 235
+ T +TL V+ C G + W E G G +V V AL+++YSKC
Sbjct: 176 ASLGSTTRMTLAPVLKLCLNSGCL----WAAEGVHGYAIKIGLEWDVFVSGALVNIYSKC 231
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + DA +F M++R+V ++ M+ G+ G A QLF + ++ +P+ + +L
Sbjct: 232 GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 291
Query: 296 TAC 298
C
Sbjct: 292 NGC 294
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQ-----GHLKDSISLYCSMRREGIGPVSFTLSA 57
S R VF+ ++ W A++ Y G+ ++ + L+ +R TL+
Sbjct: 129 SSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP 188
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ K C + + +H I +G D++V ++ +Y KCG
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIG-LEWDVFVSGALVNIYSKCG--------------- 232
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
M A LF+ + +D V W M+ GYVQ +EA + F
Sbjct: 233 ----------------RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 178 YAGVETDYVTLVGVISACAQLGV--IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+G+ D ++ +++ C G ++ V IA SG ++V V ++L++MYSK
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD--SDVSVANSLVNMYSKM 334
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G A +F MK ++ S++SMI A ++ LF D++ KP+ T +
Sbjct: 335 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASIT 394
Query: 296 TACSHVGLKC 305
A + C
Sbjct: 395 LATAAKACGC 404
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 222 VVVGSA--------LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH-----GR 268
VV GSA L+ MYSKCGS+ A ++F +R++ ++++++ +A G
Sbjct: 104 VVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGN 163
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA------------ 316
A + LF + + +T VL C + G C + YA
Sbjct: 164 AQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG--CLWAAEGVHGYAIKIGLEWDVFVS 221
Query: 317 -CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HLFEL 373
+V++ + G + +A + + M E + +W +L G Q+ E Q+ + H L
Sbjct: 222 GALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 280
Query: 374 EPDKIGNYIILS 385
PD+ +IL+
Sbjct: 281 RPDEFSVQLILN 292
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/563 (38%), Positives = 324/563 (57%), Gaps = 53/563 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF++ + + ++W AL R L GH ++ + LY M R G+ FT + + KAC
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 64 ----EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
++ G++IHA + G+ S +Y+ T++ MY + GC
Sbjct: 190 ASECTADHLTKGKEIHAH-LTRRGYNSHVYIMTTLVDMYAR---FGC------------- 232
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
++ A +FN +P+++ V+W+AM+ Y +N K EA+ F M
Sbjct: 233 ---------------VDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTE 277
Query: 180 GVET--DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++ + VT+V V+ ACA L ++ + G I V+ SAL+ MY +CG
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI--SALVTMYGRCGK 335
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D R+F M R+V S++S+I + +HG AIQ+F +M+ P VTF+ VL A
Sbjct: 336 LDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH GL + +G+ P +HYACMVDLLGRA L+EA KMV+ M EP
Sbjct: 396 CSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
VWG+LLG+C+IH N E+A+ A+ LF LEP GNY++L++IYA A MWD+V RV++LL+
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
GL+K PG W+E R ++ F + D +P +I L L + ++ GY P + VL
Sbjct: 516 HRGLQKLPGRCWMEVRRK-MYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVL 574
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
Y++ EEK+RI++ HSEKLALAFGL+ TS G +RI KNLR+CEDCHLF S+ + +E
Sbjct: 575 YELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKE 634
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD RFH F++G CSCG+YW
Sbjct: 635 ILVRDVNRFHRFKNGVCSCGDYW 657
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 324/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + ++ W +I G G +D++ + M + P SFTLS++ E
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++ G++IH I G+ +D+++G+++I MY KC + S +VF
Sbjct: 250 VNLLKGKEIHGYAIR-NGYDADVFIGSSLIDMYAKCTRVDDSCRVF-------------- 294
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
LP D ++W +++ G VQN E +++F++M A ++ ++
Sbjct: 295 -----------------YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 337
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ ++ ACA L + + S F NV + SAL+DMY+KCG+I A IF
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD--GNVFIASALVDMYAKCGNIRTARWIF 395
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+ ++ S+++MI+G+A+HG A+ AI LF M KPN V F+ VLTACSH GL
Sbjct: 396 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 455
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +HYA + DLLGR G LEEA + + M +EP G VW LL A
Sbjct: 456 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N E+A+ + LF ++P IG Y++LSNIY++AG W D ++R ++ G+KK P
Sbjct: 516 CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 575
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F AGD +HP I +AL LL++++ +GY + VL+DV +E+K
Sbjct: 576 ACSWIE-IKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQK 634
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L +HSE+LA+ FG+++T G T+R+ KNLR+C DCH S+++GREIVVRDN R
Sbjct: 635 RYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSR 694
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG++W
Sbjct: 695 FHHFKDGKCSCGDFW 709
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 166/353 (47%), Gaps = 25/353 (7%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++IR Y G S+S + M G P ++ K+CT + D+ G+ +H I
Sbjct: 74 WKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCII 133
Query: 80 LLG-GFTSDLYVGNTMIGMYVKCGFL---GCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
LG GF DLY N ++ MY K L +KVFDE DV S E Y +
Sbjct: 134 RLGMGF--DLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----L 186
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
S +F +P +D V+W +++G QN +A+ M A + D TL V+
Sbjct: 187 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A+ + + A +G+ +V +GS+LIDMY+KC +DD+ R+F + Q + S
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDA--DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 304
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGV 308
++S+I G +G ++ F M+ + KPN V+F ++ AC+H+ L Y +
Sbjct: 305 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 364
Query: 309 SPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
D + +VD+ + G + A + +KM + + W A++ +H
Sbjct: 365 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALH 416
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/589 (35%), Positives = 335/589 (56%), Gaps = 48/589 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ + LW +IR Y G +I LY SM G+ P +T + KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+L + G +IH+ + G SD++V ++ Y KCG L ++++F M RDVV+W
Sbjct: 121 GLLAIEDGVEIHSHAKMFG-LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 124 ELIVAYANNG----------DMESAG----------------------GLFNELPLKDKV 151
+I + G M+ G +F+ + ++++V
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEV 239
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W+AM+ GYV + +EA++ F MQ +G++ D T++GV+ AC+ L +++ C
Sbjct: 240 SWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG--FCSHG 297
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
G + ++ +ALIDMYSKCG I A +F M + ++ S+++MI+G+ +HG
Sbjct: 298 YLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGME 357
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMV 319
A+ LF D++ KP+ +TFI +L++CSH GL + + + P +H CMV
Sbjct: 358 ALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMV 417
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
D+LGRAG ++EA + MP EP+ +W ALL AC+IH+N E+ + + + L P+ G
Sbjct: 418 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 477
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNST 439
N+++LSNIY++AG WDD + +R K GLKK PG SW+E + G++H F GD +H +
Sbjct: 478 NFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEIN-GIVHAFVGGDQSHLQLS 536
Query: 440 EIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
+I + L +LL ++ GYQ V DV +EEK++IL+ HSEKLA+AFG+L G +
Sbjct: 537 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 596
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ KNLR+C DCH + + + REI VRD RFHHF++G C+CG++W
Sbjct: 597 LVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 41/304 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L +AC + ++ ++IH Q L +D V + + +Y+ C + +R++FDE+P
Sbjct: 14 LLEACIQSKSLTEAKKIH-QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ W ++I AYA NG + AI+ + M
Sbjct: 73 SVILWNQIIRAYAWNGPFDG-------------------------------AIDLYHSML 101
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ GV + T V+ AC+ G++ + V + FG ++V V +AL+D Y+KCG
Sbjct: 102 HLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGI 159
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ +A R+F M R+V ++++MI G +++G A+QL M + PN T +GVL
Sbjct: 160 LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219
Query: 298 CSHV--GLKCYGVSPSTDH--YACMVDLLGRAGCLEEAL---KMVEKMPVEPNGGVWGAL 350
C + K + V + ++ M+ + C++EAL +M++ ++P+ +
Sbjct: 220 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGV 279
Query: 351 LGAC 354
L AC
Sbjct: 280 LPAC 283
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/531 (40%), Positives = 321/531 (60%), Gaps = 22/531 (4%)
Query: 35 DSISLYCSMRR-EGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
+S+ ++ SM R G P +T +FKAC L V G+QI I +G S+L+V N
Sbjct: 14 NSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIG-LESNLFVTNA 72
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
MI MY G + +R+VFD ++D+ SW +I Y +G++ A +F+E+ +D V+W
Sbjct: 73 MIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
T ++ GYVQ +EA++ F M G + TL ++ACA L + W+ +
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 192
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIF---VGMKQRNVFSYSSMILGFAMHGRAH 270
S +N ++ S L+DMY+KCG ID A ++F G+K + V+ +++MI G+AMHG++
Sbjct: 193 SEI-KMNERLLAS-LLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSK 249
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACM 318
AI LF M + PN VTF+ +L ACSH L YG+ P +HY CM
Sbjct: 250 EAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCM 309
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
VDLLGR+G L+EA + V MP+ P+ +WGALLGAC+IH++ E Q + EL+ D I
Sbjct: 310 VDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHI 369
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
G +++L+N+Y+++G WD+ VR+ ++++G KK PG S +E + GV H+F GD +HP +
Sbjct: 370 GCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELN-GVFHQFLVGDRSHPQT 428
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI-LMTHSEKLALAFGLLTTSPGA 497
++ L ++ +L+ GY P VL D+ DEE K L HSEKLA+AFGL+ T PG
Sbjct: 429 KQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGT 488
Query: 498 TVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH S+V REI+VRD +R+HHF+DG CSC +YW
Sbjct: 489 AIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 37/244 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ WT +I GY+ G K+++ L+ M + G P FTL++ AC ++
Sbjct: 120 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA 179
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ IH +Y+ + I +M ER + S L+
Sbjct: 180 LDQGRWIH------------VYIDKSEI-----------------KMNERLLAS---LLD 207
Query: 128 AYANNGDMESAGGLF-NELPLKDKV-AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
YA G+++ A +F +E LK KV W AM+ GY + K +EAI+ FE+M+ V +
Sbjct: 208 MYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNK 267
Query: 186 VTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT V +++AC+ +++ + +A G P + ++D+ + G + +A
Sbjct: 268 VTFVALLNACSHGKLVEEGRGYFKSMASSYGIEP--EIEHYGCMVDLLGRSGLLKEAEET 325
Query: 245 FVGM 248
M
Sbjct: 326 VFNM 329
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 320/556 (57%), Gaps = 51/556 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + + N WTALI GY+ +++I L+C+M + P FT S++ KAC +
Sbjct: 303 RKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASL 362
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D +G+Q+H QTI LG T + VGN++I MY
Sbjct: 363 PDFGIGKQLHGQTIKLGLSTINC-VGNSLINMY--------------------------- 394
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETD 184
A +G ME A FN L K+ +++ T NAK ++ E F +++ GV
Sbjct: 395 ----ARSGTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFNHEVEHTGVGAS 447
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G I + + SGFG N+ + +ALI MYSKCG+ + A ++
Sbjct: 448 PFTYACLLSGAACIGTIVKGEQIHALIVKSGFG--TNLCINNALISMYSKCGNKEAALQV 505
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M RNV +++S+I GFA HG A A++LF +M++ KPN VT+I VL+ACSHVGL
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +SP +HYACMVDLLGR+G L EA++ + MP + + VW LG
Sbjct: 566 DEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLG 625
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C++HRN ++ + AA + E EP YI+LSN+YAS G WDDV+ +R+ +K L K
Sbjct: 626 SCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKE 685
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
GYSW+E D V H+F GD +HP + +I L +L +++ GY PN VL+DV DE+
Sbjct: 686 TGYSWIEVDNQV-HKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQ 744
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HSEK+A+A+ L++T +R+ KNLR+C DCH + S V GREIVVRD
Sbjct: 745 KEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDAN 804
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH +DGKCSC +YW
Sbjct: 805 RFHHIKDGKCSCNDYW 820
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 34/253 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+++++KN WT +I Y G L D++ L+C + P FTL++L AC E+
Sbjct: 202 RMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVEL 261
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
SLG+Q+H+ ++ G SD++VG T++ MY K + SRK+F+ M +V+SWT
Sbjct: 262 EFFSLGKQLHSW-VIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT-- 318
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A+++GYVQ+ + +EAI+ F M + V +
Sbjct: 319 -----------------------------ALISGYVQSRQEQEAIKLFCNMLHGHVTPNC 349
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+ ACA L + G IN VG++LI+MY++ G+++ A + F
Sbjct: 350 FTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTIN--CVGNSLINMYARSGTMECARKAF 407
Query: 246 VGMKQRNVFSYSS 258
+ ++N+ SY++
Sbjct: 408 NILFEKNLISYNT 420
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 34/261 (13%)
Query: 39 LYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMY 98
L CS R I P + +AL ++C+ L + G I A + G F S + VG +I M+
Sbjct: 134 LQCS--RNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMF 191
Query: 99 VKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVT 158
K G D++SA +F+++ K+ V WT M+T
Sbjct: 192 TKGGL------------------------------DIQSARMVFDKMQHKNLVTWTLMIT 221
Query: 159 GYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGP 218
Y Q +A++ F R+ + D TL ++SAC +L + SG
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLA- 280
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
++V VG L+DMY+K +++++ +IF M NV S++++I G+ + AI+LF +
Sbjct: 281 -SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCN 339
Query: 279 MVKTETKPNGVTFIGVLTACS 299
M+ PN TF VL AC+
Sbjct: 340 MLHGHVTPNCFTFSSVLKACA 360
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 54/334 (16%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM- 114
S L KAC ++ LG+ +H ++ G D + N++I +Y KCG + +F M
Sbjct: 43 SLLLKACIRSGNLELGKLLH-HKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMG 101
Query: 115 -PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+RD+VSW+ +I +ANN MES R + +
Sbjct: 102 HHKRDLVSWSAIISCFANNS-MES-----------------------------RALLTFL 131
Query: 174 ERMQYAG--VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+Q + + + ++ +C+ + +G+ ++V VG ALIDM
Sbjct: 132 HMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFD-SHVCVGCALIDM 190
Query: 232 YSKCG-SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
++K G I A +F M+ +N+ +++ MI ++ G A+ LF ++ +E P+ T
Sbjct: 191 FTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFT 250
Query: 291 FIGVLTACSHVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEK 337
+L+AC V L+ + + + +VD+ ++ +E + K+
Sbjct: 251 LTSLLSAC--VELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNT 308
Query: 338 MPVEPNGGVWGALL-GACQIHRNPEIAQIAANHL 370
M + N W AL+ G Q + E ++ N L
Sbjct: 309 M-LHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 25/202 (12%)
Query: 173 FERMQYAGVETDYVTLVGVIS------ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
FE ++ A D T +I AC + G ++ + SG P+++V++ S
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGL-PLDSVLLNS 79
Query: 227 ALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
LI +YSKCG ++A IF +G +R++ S+S++I FA + A+ F M++
Sbjct: 80 -LITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSR 138
Query: 285 K---PNGVTFIGVLTACSH-----VGLKCYGVSPST---DHYAC----MVDLLGRAGCLE 329
PN F +L +CS+ GL + T D + C ++D+ + G
Sbjct: 139 NIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDI 198
Query: 330 EALKMVEKMPVEPNGGVWGALL 351
++ +MV N W ++
Sbjct: 199 QSARMVFDKMQHKNLVTWTLMI 220
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 321/559 (57%), Gaps = 19/559 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKA 61
+ + +Q F ++IR Y S Y + + + P ++T + L +
Sbjct: 61 YSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRT 120
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + G +H ++ GF D +V + +I MY + L +VF+ + + D+V
Sbjct: 121 CAQSA-CEAGPAVHG-ALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVC 178
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T ++ A A GD+ A LF+ +P +D V+W AM+ GY Q + REA+ F+ MQ GV
Sbjct: 179 QTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGV 238
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + V+++ V++AC LG + W E + N+ G+AL+DMY KCG++D A
Sbjct: 239 KVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNL--GTALVDMYFKCGNVDRA 296
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M ++NV+++S+ I G AM+G ++LF M PN +TFI VL CS V
Sbjct: 297 LKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVV 356
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G + +G+ P +HY CMVDL GRAG LEEAL + MP++P+ G WGA
Sbjct: 357 GFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGA 416
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL AC++++N E+ + A+ L E+E G Y+ LSNIYA G WD VS VR+ +K G+
Sbjct: 417 LLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGI 476
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG S +E + G +HEF +GD +HP+ I+ G++ RL+ GY + SVL+D+
Sbjct: 477 SKLPGCSVMEVN-GEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIE 535
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEK+A+AFGL + G +RI+KNLRIC DCH S++ REI+VR
Sbjct: 536 EEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVR 595
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG+CSC ++W
Sbjct: 596 DRNRFHHFKDGECSCKDFW 614
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/550 (39%), Positives = 326/550 (59%), Gaps = 19/550 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ ++N W +I GY G + ++ ++ R+G+ P +L++ F AC+ +
Sbjct: 374 LFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEA 433
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+H+ + G F S YV N +I +Y K +G R++FD M +D VS+ +
Sbjct: 434 LETGKQVHSLAVKAGCQFNS--YVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFM 491
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A N + A +FN +P D V+WT +++ Q + EA+E F M + +
Sbjct: 492 SALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPP 551
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L ++ LG + + IA G + +VV +AL+ MY KC S D + ++F
Sbjct: 552 ILTILLGLSGNLGAPQLGQQIHTIAIKLGMD--SGLVVANALVSMYFKCSSAD-SLKVFD 608
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M++R++F+++++I G+A HG AI+++ MV PN VTF+G+L ACSH GL
Sbjct: 609 SMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDE 668
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG++P +HYACMVDLLGRAG ++ A + MP+EP+ +W ALLGAC
Sbjct: 669 GHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC 728
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N EI + AA LF +EP GNY++LSNIY+S GMWD+V++VR+L+K G+ K+PG
Sbjct: 729 KIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPG 788
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW++ + +H F GD H I L +L L+A GY P+ VL+D+ +E+K+
Sbjct: 789 CSWMQ-IKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKE 847
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L+ HSEKLA+A+GLL T G ++IMKNLRIC DCH F+ S V REI VRD RF
Sbjct: 848 SSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRF 907
Query: 535 HHFQDGKCSC 544
HHF++G CSC
Sbjct: 908 HHFRNGSCSC 917
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 12/272 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +++ W ++I Y G SL ++ + + LS +A
Sbjct: 53 REVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARA---- 108
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+ A+ + G + N M+ YV+ G + +RK+FD MP RDV SW +
Sbjct: 109 -----GRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTM 163
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y ++ ME A LF +P ++ V+WT M++GYV + A + F M G+ +
Sbjct: 164 LTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQ 223
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK-CGSIDDAYRI 244
LV V+SA LG + + +GF +VVVG+A+++ Y+K +D A +
Sbjct: 224 PNLVSVLSAVRHLGKPGILESIHVLVHKTGFE--RDVVVGTAILNGYTKDVNMLDSAVKF 281
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
F GM RN +++S++I + GR A ++
Sbjct: 282 FEGMAARNEYTWSTIIAALSQAGRIDDAFAVY 313
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 68/357 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE++ +N WT +I GY+L + ++ +M EG+ P L ++ A +
Sbjct: 177 RNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHL 236
Query: 66 LDVSLGQQIHAQ-------------TILLGGFTSDL------------------YVGNTM 94
+ + IH T +L G+T D+ Y +T+
Sbjct: 237 GKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTI 296
Query: 95 IGMYVKCG-----------------------FLGCSRK--------VFDEMPERDVVSWT 123
I + G G +R +FD++ E +VVSW
Sbjct: 297 IAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWN 356
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y N ++ A LFN +P ++ ++W M+ GY +N + +A+ + + G+
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLP 416
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+L AC+ + ++ V +A +G N V +ALI +Y K SI +
Sbjct: 417 SLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQ--FNSYVCNALITLYGKYRSIGSVRQ 474
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
IF M ++ SY+S + + A +F +M P+ V++ +++AC+
Sbjct: 475 IFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISACAQ 527
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
+ G L +R+VFD MP RD+++W +I AY NNG ++ L + + + T +++G
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
Y + + R+A F+ M GV + V +++ Q G I A + +
Sbjct: 105 YARAGRVRDARRVFDGM---GVR-NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSW 160
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM---HGRAHAAIQLF 276
N ++ G Y +++A +F M +RN S++ MI G+ + HGR A +F
Sbjct: 161 NTMLTG------YCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR---AWDMF 211
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVG 302
M+ P + VL+A H+G
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLG 237
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 301/474 (63%), Gaps = 15/474 (3%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D+++ N M+ YV G + +RKVFD M RD+VSW +I YA GD+ A +F+
Sbjct: 115 DVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTR 174
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D +W++M++ Y + +EA+E + M+ AGV D +++V V+SAC+ +G +
Sbjct: 175 DRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAE 234
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V E + ++ +G+AL+DMY+KCG I+++ ++F M ++V ++SSMI+G A H
Sbjct: 235 VHRFVESNRVEV--DMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANH 292
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDH 314
G H A+ LF +M+ +PN +TFIGVL AC+HVGL +GV P +H
Sbjct: 293 GLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEH 352
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y CMVDLLGRAG +EEA++++ M +P+ +W LLGAC+IH+N EIA+ A L L+
Sbjct: 353 YGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLD 412
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT 434
P G+Y++LSNIYA A W+ V+ +R+ ++ +++ PG S +E + +HEF +GD +
Sbjct: 413 PLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWE-NTVHEFVSGDRS 471
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS 494
HP EI + L +++DRL+ GY+P VL D+ ++ KKR L HSEKLA+AFGLL T
Sbjct: 472 HPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTP 531
Query: 495 PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+T+RI KNLR CEDCH + S R+++VRD RFHHF +G+CSC +YW
Sbjct: 532 ARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 117/249 (46%), Gaps = 41/249 (16%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+ + ++ F W+++I Y K+++ L+ MR G+ P ++ ++ AC+
Sbjct: 165 MAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACS 224
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +++G ++H + + D+ +G ++ MY KCG + S KVF MP +DV++W+
Sbjct: 225 AMGALAIGAEVH-RFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWS 283
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I+ AN+G A LF+E M G++
Sbjct: 284 SMIIGLANHGLGHDALSLFSE-------------------------------MISQGLQP 312
Query: 184 DYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ +T +GV+ AC +G++ KY + + ++ G + + ++D+ + G ++
Sbjct: 313 NEITFIGVLIACTHVGLVNDGKKYFSSMSDV-----HGVVPRMEHYGCMVDLLGRAGHVE 367
Query: 240 DAYRIFVGM 248
+A + M
Sbjct: 368 EAMELIRSM 376
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ W+++I G G D++SL+ M +G+ P T + ACT V
Sbjct: 270 VFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGL 329
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V+ G++ + + G + M+ + + G + + ++ M + D + W L+
Sbjct: 330 VNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLL 389
Query: 127 VAYANNGDMESAGGLFNELPLKDKVA 152
A + ++E A +L + D +A
Sbjct: 390 GACRIHKNVEIAEEAMAKLKVLDPLA 415
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 326/566 (57%), Gaps = 28/566 (4%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK-- 60
S+P L+F + F L+R +L L + L+ + R +F L++L
Sbjct: 80 SYPLLLFRCSNCTSAFASNHLLR--VLPHPL--PLRLFPRLPRRNPHSFTFLLASLSNHL 135
Query: 61 -----ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
A + +G +HA + G DLYV N I Y CG + RKVFDE+P
Sbjct: 136 DTEPAAAGSIASRFMGTHVHALAVKAGA-AGDLYVRNAQIHFYGVCGDVAAMRKVFDELP 194
Query: 116 -ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
RDVV+W ++ Y G + A +F+ +P++D+V+W+ ++ GYV+ +P A+ F+
Sbjct: 195 IVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFK 254
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M GV+ + +V +SA AQLG+++ +V E+ + G +V +G+ALIDMYSK
Sbjct: 255 NMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGM--TMSVNLGAALIDMYSK 312
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGS+ A +F M +R+VF+++SMI G A HG H A+QLF V P +TF+GV
Sbjct: 313 CGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGV 372
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L ACS GL + Y + +HY CMVDLL RAG ++EA++++E M + P
Sbjct: 373 LNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP 432
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
+ +WG +L AC+ H ++ N L EL+P G Y++L++IYA A WD+V +VR+
Sbjct: 433 DPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRK 492
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
L+ G K+ G+S +E G++H+F GD+ H +S I L + RL GY P++
Sbjct: 493 LMSNRGTSKSAGWSLMEA-HGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVS 551
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
SVL+D+ DEEK + HSE+LA+A+G + G+ +RI+KNL +C DCH F ++V
Sbjct: 552 SVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVF 611
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
GREIVVRD RFHH +DGKCSC +YW
Sbjct: 612 GREIVVRDGSRFHHMKDGKCSCHDYW 637
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 334/557 (59%), Gaps = 23/557 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F + + FL+ L + + L S+ Y M + + P +FT +L +AC
Sbjct: 58 LFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEE 117
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +Q+HA +L GF D Y N +I +Y G L +R+VF M + +VVSWT L+
Sbjct: 118 E---AKQLHAH-VLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLV 173
Query: 127 VAYANNGDMESAGGLFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETD 184
Y+ G ++ A +F +P K + V+W AM+ +V+ + REA F RM+ +E D
Sbjct: 174 SGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELD 233
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
++SAC +G ++ W+ + E +G + + + + +IDMY KCG +D A+ +
Sbjct: 234 RFVAATMLSACTGVGALEQGMWIHKYVEKTGI--VLDSKLATTIIDMYCKCGCLDKAFHV 291
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGL 303
F G+K + V S++ MI GFAMHG+ AI+LF +M + P+ +TF+ VLTAC+H GL
Sbjct: 292 FCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGL 351
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G+ P+ +HY CMVDLL RAG LEEA K++++MP+ P+ V GALL
Sbjct: 352 VEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALL 411
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH N E+ + N + EL+P+ G Y+IL N+YAS G W+ V+ VR+L+ G+KK
Sbjct: 412 GACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKK 471
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG+S +E + GV++EF AG HP + I + ++L+ ++ G+ P+ VL+D+ +E
Sbjct: 472 EPGFSMIEME-GVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEE 530
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E++ L HSEKLA+A+GLL T G T+R+ KNLR+C+DCH S+V +I++RD
Sbjct: 531 ERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDR 590
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF +G+CSC +YW
Sbjct: 591 SRFHHFSNGECSCKDYW 607
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 331/572 (57%), Gaps = 41/572 (7%)
Query: 12 VKYKNP-----------FLWTALIRGYI-----LQGHLKDSISLYCSMRREGIGPVSFTL 55
+ Y NP F+W +IR + Q H IS+Y MR + P T
Sbjct: 7 ISYANPIFHIRHLKLESFVWNIIIRAIVHNVSPPQRH--SPISVYFRMRHHCVSPDFHTF 64
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
L + + + LGQ+ HAQ ILL G D +V +++ MY CG L + ++FDE
Sbjct: 65 PFLLPSFHNPIHLPLGQRTHAQ-ILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESV 123
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+D+ +W ++ AYA G + A LF+E+P ++ ++W+ ++ GYV K +EA++ F
Sbjct: 124 SKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 183
Query: 176 MQYAG-----VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
MQ V + T+ V+SAC +LG ++ WV + +G ++V+G+ALID
Sbjct: 184 MQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDK--YGVEIDIVLGTALID 241
Query: 231 MYSKCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNG 288
MY+KCGS++ A R+F + +++V +YS+MI AM+G Q+F +M + PN
Sbjct: 242 MYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNS 301
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
VTF+G+L AC H GL + +G++PS HY CMVDL GR+G ++EA +
Sbjct: 302 VTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 361
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
MP+EP+ +WG+LL ++ + + + A L EL+P G Y++LSN+YA G W +
Sbjct: 362 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIE 421
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
V R+R +++ G+KK PG S++E + GV+HEF GD + S I L +++ RL+ G
Sbjct: 422 VKRIRHEMEVKGIKKVPGCSYVEVE-GVVHEFVVGDESQQESERIYAMLEEIMQRLREAG 480
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
Y + + VL D+ +++K+ L HSEKLA+AF L+ T PG VRI+KNLRIC DCHL M
Sbjct: 481 YVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMK 540
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ REIVVRD RFHHF DG CSC ++W
Sbjct: 541 MISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 41/270 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-----IGPVSFTLSALFK 60
R +F+++ +N W+ LI GY++ G K+++ L+ M+ + P FT+S +
Sbjct: 147 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLS 206
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDV 119
AC + + G+ +H+ I G D+ +G +I MY KCG L +++VFD + ++DV
Sbjct: 207 ACGRLGALEQGKWVHSY-IDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDV 265
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+++ +I A G + +F+E+ +
Sbjct: 266 KAYSAMICCLAMYGLTDECFQVFSEMTTSN------------------------------ 295
Query: 180 GVETDYVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + VT VG++ AC G+I K ++ + E G P ++ ++D+Y + G I
Sbjct: 296 NINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITP--SIQHYGCMVDLYGRSGLI 353
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
+A M + +V + S++ G M G
Sbjct: 354 KEAESFIASMPMEPDVLIWGSLLSGSRMLG 383
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 312/553 (56%), Gaps = 54/553 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V+ N FLW +I+ I +I LY M P +T A+ KAC++
Sbjct: 114 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 173
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V+ G Q+HA ++ G D ++ ++ I MY G L +R++ D+
Sbjct: 174 VAEGVQVHAH-LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD-------------- 218
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
GG + + + D+ EA+E F +MQ +
Sbjct: 219 ----------KGGEVDAVCMPDRKGCFM------------EALEIFHQMQKEKIRPRKFV 256
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+SACA LG + W+ A+ + + V+G++L+DMY+KCG ID A+ +F
Sbjct: 257 LPSVLSACANLGALDQGRWIHTYAKRNSIQL--DGVLGTSLVDMYAKCGRIDLAWEVFEK 314
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M + V S+++MI G AMHGRA AI LF M + PN +TF+GVL AC+H GL
Sbjct: 315 MSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKG 371
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YGV P +HY C+VDLLGRAG L EA K+V +P EP VWGALLGAC+
Sbjct: 372 LTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACR 431
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+ + L ELEP G Y +LSNIYA AG W++V VR+L+K G+K PG
Sbjct: 432 KHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGT 491
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S ++ RG +H+F GD +HP +I Q L + +RLQ +GY+P+ VL+D+ +EEK+
Sbjct: 492 SIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKET 551
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+ HSEKLA+ FGL+ TSPG T+RI+KNLR+CEDCH SQV REI+VRD +R+H
Sbjct: 552 AVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYH 611
Query: 536 HFQDGKCSCGNYW 548
HF++G CSC ++W
Sbjct: 612 HFRNGACSCKDFW 624
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 44/294 (14%)
Query: 125 LIVAYANNG-----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
L+ +YAN ES+ +F+ + + W M+ ++N +P +AI + M A
Sbjct: 93 LVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVA 152
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ T V+ AC+ GV+ V G G +++ S+ I MY+ G +
Sbjct: 153 HFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHIL--SSAIRMYASFGRLV 210
Query: 240 DAYRIF---------VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
+A RI V M R G A+++F M K + +P
Sbjct: 211 EARRILDDKGGEVDAVCMPDRK--------------GCFMEALEIFHQMQKEKIRPRKFV 256
Query: 291 FIGVLTACSHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMP 339
VL+AC+++G + Y S +VD+ + G ++ A ++ EKM
Sbjct: 257 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 316
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
W A++G +H E A I ++ P++I ++ + N A G+
Sbjct: 317 -NKEVSSWNAMIGGLAMHGRAEDA-IDLFSKMDINPNEI-TFVGVLNACAHGGL 367
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 72/186 (38%), Gaps = 51/186 (27%)
Query: 217 GPINNVVVGSALIDMYSKCG-----SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
G + + + +L+ Y+ S + + R+F +++ NVF ++ MI +
Sbjct: 82 GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFK 141
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGV------------------SPSTD 313
AI L+ +M+ +PN T+ VL ACS G+ GV S +
Sbjct: 142 AILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIR 201
Query: 314 HYA----------------------CMVDLLGRAGCLEEALKMVEKM---PVEPNGGVWG 348
YA CM D R GC EAL++ +M + P V
Sbjct: 202 MYASFGRLVEARRILDDKGGEVDAVCMPD---RKGCFMEALEIFHQMQKEKIRPRKFVLP 258
Query: 349 ALLGAC 354
++L AC
Sbjct: 259 SVLSAC 264
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/626 (36%), Positives = 340/626 (54%), Gaps = 88/626 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT L Y G+ ++S+ Y +M +EG+ P T + AC +
Sbjct: 200 RRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSL 259
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHAQ I+ SD+ V + MY+KCG + +R+VF+ +P RDV++W +
Sbjct: 260 AALEKGKQIHAQ-IVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTM 318
Query: 126 IVAYANNGDMESAGGLFN----ELPLKDKVAWTAMVTG---------------------- 159
I ++G +E A G+F+ E D+V + A+++
Sbjct: 319 IGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGL 378
Query: 160 -------------YVQNAKPREAIEYFERMQ-------------YA-------------- 179
Y + ++A + F+RM YA
Sbjct: 379 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKK 438
Query: 180 ----GVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSK 234
GVE + +T + V+ AC+ +K W EI AE G ++ V +AL+ MY K
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALK---WGKEIHAEVVKAGIFADLAVANALMSMYFK 495
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGS++DA R+ GM R+V +++++I G A +GR A+Q F M E +PN TF+ V
Sbjct: 496 CGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNV 555
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
++AC L K YG+ P+ HYACMVD+L RAG L EA ++ MP +P
Sbjct: 556 MSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKP 615
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
+ +WGALL AC+ H N EI + AA +LEP G Y+ LS IYA+AGMW DV+++R+
Sbjct: 616 SAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRK 675
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
L+K G+KK PG SW+E G +H F AGD +HP + EI L L ++++ GY P+ R
Sbjct: 676 LMKERGVKKEPGRSWIEVA-GEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTR 734
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
V++D+ E K+R + HSEKLA+A+GL++T P +R+ KNLR+C DCH S++
Sbjct: 735 FVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKIT 794
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
GREI+ RD RFHHF++G+CSCG+YW
Sbjct: 795 GREIIARDAHRFHHFKNGECSCGDYW 820
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 180/359 (50%), Gaps = 48/359 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ K+ W +I GY +G +++ +L+ M++EG+ P FT ++ AC+
Sbjct: 99 RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+++H + ++ G ++ VGN +I MY KCG + +R+VFD M RD VSWT L
Sbjct: 159 AALNWGREVHVR-VMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 217
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AYA +GY Q E+++ + M GV
Sbjct: 218 TGAYAE--------------------------SGYAQ-----ESLKTYHAMLQEGVRPSR 246
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T + V+SAC L ++ + +I E ++V V +AL MY KCG++ DA +
Sbjct: 247 ITYMNVLSACGSLAALEKGKQIHAQIVESEHH---SDVRVSTALTKMYIKCGAVKDAREV 303
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GL 303
F + R+V ++++MI G G+ A +F M+K P+ VT++ +L+AC+ GL
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 304 KC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
C G+ ++++ +AG +++A ++ ++MP + + W AL+G
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVG 421
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 90/400 (22%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
S+ L ++C + D+++G+Q+H + IL G ++Y+ NT++ +YV CG + +R++F
Sbjct: 44 SYDYVKLLQSCVKAKDLAVGKQVH-EHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D+ + VVSW +I YA+ G +EA
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRG-------------------------------LGQEAFN 131
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALID 230
F MQ G+E D T V ++SAC+ + NW E+ G NN VG+ALI
Sbjct: 132 LFTLMQQEGLEPDKFTFVSILSACSSPAAL---NWGREVHVRVMEAGLANNATVGNALIS 188
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY+KCGS+ DA R+F M R+ S++++ +A G A +++ + M++ +P+ +T
Sbjct: 189 MYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRIT 248
Query: 291 FIGVLTACSHVG-------------------------------LKCYGVSPSTDHYAC-- 317
++ VL+AC + +KC V + + + C
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Query: 318 ---------MVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGALLGACQIHRNPEIA-- 363
M+ L +G LEEA M +M E P+ + A+L AC R +A
Sbjct: 309 NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACA--RPGGLACG 366
Query: 364 -QIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRV 400
+I A + + + + GN +I N+Y+ AG D +V
Sbjct: 367 KEIHARAVKDGLVSDVRFGNALI--NMYSKAGSMKDARQV 404
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
P + ++Y + G + D V ++ +C + + V E G P NV +
Sbjct: 28 PADVLQYLHQ---KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKP--NVYII 82
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+ +Y CGS+++A R+F ++V S++ MI G+A G A LF M + +
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 286 PNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
P+ TF+ +L+ACS HV + G++ + ++ + + G + +A ++
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRV 202
Query: 335 VEKMPVEPNGGVWGALLGA 353
+ M W L GA
Sbjct: 203 FDAMASRDEVS-WTTLTGA 220
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/447 (45%), Positives = 287/447 (64%), Gaps = 15/447 (3%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MPE+ +VS T +I YA G ++ A LF+ L +D + W M+ GY Q+ P E + F
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+M A V + VT++ V+SAC Q G ++ WV E +G G NV VG++LIDMYS
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGI--NVRVGTSLIDMYS 118
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCGS++DA +F + ++V +++SM++G+AMHG + A++LF +M +P +TFIG
Sbjct: 119 KCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIG 178
Query: 294 VLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL ACSH GL YG+ P +HY CMV+LLGRAG LEEA ++V+ M ++
Sbjct: 179 VLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
+ +WG LLGAC++H N + + A +L G Y++LSNIYA+AG W+ V+RVR
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVR 298
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+K +G +K PG S +E + V HEF AGDL HP S EI + L ++ L+ GY P
Sbjct: 299 TLMKESGFEKEPGCSSIEVNNKV-HEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQT 357
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
VL+D+ D +K+R L HSEKLALAFGL+TT PG T++I+KNLR+C DCH S++
Sbjct: 358 DIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKI 417
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
GR++V+RD RFHHF +G CSCG+YW
Sbjct: 418 TGRKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 131/288 (45%), Gaps = 35/288 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ ++ ++ W +I GY G + + L+ M + P T+ A+ AC +
Sbjct: 26 RVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQT 85
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ I G ++ VG ++I MY KCG L +R VF+ + +DVV+W +
Sbjct: 86 GALETGRWVHSY-IENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSM 144
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+V YA +G F++ +A+ F+ M G +
Sbjct: 145 VVGYAMHG--------FSQ-----------------------DALRLFKEMCMIGYQPTD 173
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +GV++AC+ G++ W + +G V ++++ + G +++AY +
Sbjct: 174 ITFIGVLNACSHAGLVS-EGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELV 232
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M+ ++ + +++ +HG Q+ + + ++ N T++
Sbjct: 233 KNMEIDQDPVLWGTLLGACRLHGNIALGEQI-AEYLVSQNLANSGTYV 279
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/566 (39%), Positives = 317/566 (56%), Gaps = 53/566 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R+ E ++ + WTA+I GY +G +++ ++ M G P TL +L AC
Sbjct: 453 FERMTEENIEL-DVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACV 511
Query: 64 EVLDVSLGQQIHAQTILL-------GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
V + G++ H I DL V N +I MY KC +RK+FD +
Sbjct: 512 SVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSP 571
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+D +D V WT M+ GY Q+ A++ F M
Sbjct: 572 KD-----------------------------RDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Query: 177 --QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
++ + TL + ACA+L +++ V + +G + + V + LIDMYSK
Sbjct: 603 FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVM-LFVANCLIDMYSK 661
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D A +F M QRN S++S++ G+ MHGR A+++F +M K P+G+TF+ V
Sbjct: 662 SGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVV 721
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L ACSH G+ K +GV P +HYACMVDL GRAG L EA+K++ +MP+EP
Sbjct: 722 LYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEP 781
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
VW ALL AC++H N E+ + AAN L ELE G+Y +LSNIYA+A W DV+R+R
Sbjct: 782 TPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRY 841
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
+K TG+KK PG SW++G +GV F GD +HP S +I + L DL+ R++A GY P
Sbjct: 842 TMKRTGIKKRPGCSWIQGRKGVA-TFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTS 900
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
L+DV DEEK +L HSEKLALA+G+LT P A +RI KNLRIC DCH + S++I
Sbjct: 901 FALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKII 960
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
EI++RD+ RFHHF++G CSC YW
Sbjct: 961 EHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 186/424 (43%), Gaps = 87/424 (20%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F W LIR + G +D +LY M+ G P +T +FKAC + +SLG +HA
Sbjct: 225 FWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHA- 283
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
T+ GF S+++V N ++ MY KCG L + +FD++ R +
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI------------------ 325
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-DYVTLVGVISACA 196
+D V+W ++V+ Y+ + A+ F +M + + D ++LV ++ ACA
Sbjct: 326 ----------QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACA 375
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
L V + SG +++V VG+A++DMY+KCG +++A ++F MK ++V S+
Sbjct: 376 SLAASLRGRQVHGFSIRSGL--VDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSW 433
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTE--------------------------------- 283
++M+ G++ GR A+ LF M +
Sbjct: 434 NAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
Query: 284 --TKPNGVTFIGVLTACSHVG-------LKCY---------GVSPSTDHYAC---MVDLL 322
++PN VT + +L+AC VG CY G P D ++D+
Sbjct: 494 CGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMY 553
Query: 323 GRAGCLEEALKMVEKM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
+ E A KM + + P + + W ++G H + A + +F+++ N
Sbjct: 554 AKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPND 613
Query: 382 IILS 385
LS
Sbjct: 614 FTLS 617
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVA--WTAMVTGYVQNAKPREAIEYFERMQYAG 180
T LI Y + A L LP W ++ + PR+ + +M+ G
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D+ T V ACA L + + SGF +NV V +A++ MY KCG++
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFA--SNVFVCNAVVSMYGKCGALRH 312
Query: 241 AYRIFVGMKQR---NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLT 296
A+ +F + R ++ S++S++ + A+ A+ LF M P+ ++ + +L
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372
Query: 297 ACSHV-----GLKCYGVSPST----DHYA--CMVDLLGRAGCLEEALKMVEKM 338
AC+ + G + +G S + D + +VD+ + G +EEA K+ ++M
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 323/554 (58%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++++N WTA+I G+ QG + + L+ M+ +G PV T S++ KAC
Sbjct: 644 VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSAC 703
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++ A IL G+ D VGN LI
Sbjct: 704 LDEGKKVIAH-ILNSGYELDTGVGNA-------------------------------LIS 731
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY+ +G M A +F+++P +D ++W M+ GY QN A+++ +MQ GV + +
Sbjct: 732 AYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791
Query: 188 LVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V +++AC+ ++ V EI + G +V VG+ALI MY+KCGS+++A +F
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVKRKMQG---DVRVGAALISMYAKCGSLEEAQEVFD 848
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
++NV ++++MI +A HG A A+ F M K KP+G TF +L+AC+H GL
Sbjct: 849 NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVME 908
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+G+SP+ +HY C+V LLGRAG +EA ++ +MP P+ VW LLGAC
Sbjct: 909 GNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGAC 968
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N +A+ AAN+ +L Y++LSN+YA+AG WDDV+++RR+++ G++K PG
Sbjct: 969 RIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 1028
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E D +IHEF A D +HP + EI + L L ++ GY P+ + VL+++ E ++
Sbjct: 1029 RSWIEVD-NIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQE 1087
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L THSE+LA+A+GLL T PG +RI KNLRIC DCH S+++GREI+ RD+ RF
Sbjct: 1088 TSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRF 1147
Query: 535 HHFQDGKCSCGNYW 548
H F++GKCSC ++W
Sbjct: 1148 HTFKNGKCSCEDFW 1161
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 49/347 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ W A+I GY + +++ LY M+ EG+ P T L ACT
Sbjct: 440 RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S G+ IH + IL G S+ ++ N ++ MY +CG + ++ VF+ RD++S
Sbjct: 500 SAYSDGKMIH-EDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS---- 554
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +M+ G+ Q+ A + F M+ G+E D
Sbjct: 555 ---------------------------WNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V+ C ++ + + SG +V +G+ALI+MY +CGS+ DAY +F
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHMLIIESGLQL--DVNLGNALINMYIRCGSLQDAYEVF 645
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC------- 298
++ RNV S+++MI GFA G A +LF M KP TF +L AC
Sbjct: 646 HSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLD 705
Query: 299 ------SHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+H+ Y + + ++ ++G + +A K+ +KMP
Sbjct: 706 EGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP 750
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ E ++ ++ ALI GH +++ Y MR +G+ T ++ AC+
Sbjct: 339 KQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTS 398
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH+ I G +SD+ +GN++I MY +CG
Sbjct: 399 KALGAGELIHSH-ISEVGHSSDVQIGNSLISMYARCG----------------------- 434
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+ A LFN +P +D ++W A++ GY + EA++ +++MQ GV+
Sbjct: 435 --------DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGR 486
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + ++SAC + E SG +N + +AL++MY +CGSI +A +F
Sbjct: 487 VTFLHLLSACTNSSAYSDGKMIHEDILRSGIK--SNGHLANALMNMYRRCGSIMEAQNVF 544
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
G + R++ S++SMI G A HG AA +LF +M K +P+ +TF VL C
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H+ + G+ + ++++ R G L++A ++ + N W A++G
Sbjct: 605 LGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIG 661
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 197/459 (42%), Gaps = 97/459 (21%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ W +LI Y QG K + L+ M+ G P T ++ AC +
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH++ I+ G+ D V N+++ MY KC L +R+VF + RDVVS+ ++
Sbjct: 199 LEYGKKIHSK-IIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257
Query: 128 AYANNGDMESAGGLFNELPLK----DKVAW------------------------------ 153
YA +E GLF ++ + DKV +
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317
Query: 154 -----TAMVTGYVQ---NAKPREAIEYFE----------------------------RMQ 177
TA+ T +V+ A ++A+E F +M+
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV + T + V++AC+ + + I+E G ++V +G++LI MY++CG
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE---VGHSSDVQIGNSLISMYARCG 434
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ A +F M +R++ S++++I G+A A++L+ M KP VTF+ +L+
Sbjct: 435 DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLS 494
Query: 297 ACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC+ H + G+ + ++++ R G + EA + E +
Sbjct: 495 ACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DII 553
Query: 346 VWGALLGACQIHRNPEIAQIAANHLF------ELEPDKI 378
W +++ H + E AA LF LEPDKI
Sbjct: 554 SWNSMIAGHAQHGSYE----AAYKLFLEMKKEGLEPDKI 588
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 173/409 (42%), Gaps = 91/409 (22%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L + CT ++ ++IHAQ ++ G D+++ N +I MYVKC + + +VF +MP R
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQ-MVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRR 146
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D ++W ++++ Y Q ++A + FE MQ
Sbjct: 147 -------------------------------DVISWNSLISCYAQQGFKKKAFQLFEEMQ 175
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCG 236
AG +T + +++AC ++Y + +I E G + V ++L++MY KC
Sbjct: 176 TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEA---GYQRDPRVQNSLLNMYGKCE 232
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL- 295
+ A ++F G+ +R+V SY++M+ +A I LFG M P+ VT+I +L
Sbjct: 233 DLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLD 292
Query: 296 ------------------------------TACSHVGLKCYGVSPSTDH----------- 314
TA + + ++C V+ +
Sbjct: 293 AFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVV 352
Query: 315 YACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
Y ++ L + G EEA + +M V N + ++L AC + ++ +H+
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 372 ELEPD---KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
E+ +IGN +I ++YA G D+ R R L + K SW
Sbjct: 413 EVGHSSDVQIGNSLI--SMYARCG---DLPRARELFNT--MPKRDLISW 454
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W +I GY G ++ M+ +G+ F+ ++ AC+
Sbjct: 743 RKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSF 802
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+++HA+ I+ D+ VG +I MY KCG L +++VFD E++VV+W +
Sbjct: 803 SALEEGKRVHAE-IVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAM 861
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AYA +G L K A+++F M G++ D
Sbjct: 862 INAYAQHG-------------LASK------------------ALDFFNCMDKEGIKPDG 890
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGS-GFGP 218
T ++SAC G++ N + E G P
Sbjct: 891 STFTSILSACNHSGLVMEGNRIFSSLESQHGLSP 924
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
ET+ V ++ C + + A + +G GP ++ + + LI+MY KC S+ D
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGP--DIFLSNLLINMYVKCRSVSD 135
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A+++F+ M +R+V S++S+I +A G A QLF +M P+ +T+I +LTAC
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC 193
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 328/557 (58%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N WTA+I Y +G ++++L+ M R P FT + + +C
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L G+QIH+ I + S ++VG++++ MY K G ++ D
Sbjct: 177 LGFETGRQIHSIAIK-RNYESHMFVGSSLLDMYAKSG------RICD------------- 216
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A G+F+ LP +D VA TA+++GY Q EA++ F ++Q G+ ++
Sbjct: 217 ------------AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNS 264
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V++A + L + + V SG + VV+ ++LIDMYSKCG++ A RIF
Sbjct: 265 VTYASVLTALSGLAALNHGKQVHSHVLRSG--QYSYVVLLNSLIDMYSKCGNVCYARRIF 322
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSH---- 300
M +R S+++M++G++ HG A ++LF M + + KP+ +T++ VL+ CSH
Sbjct: 323 DSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLE 382
Query: 301 -VGLKCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+GL+ + G+ P HY C+VDLLGRAG +EEA ++KMP P +WG+LL
Sbjct: 383 DMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 442
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
G+C++H + EI I L ELEP+ GNY+ILSN+YASAG W+D+ +R L++ + K
Sbjct: 443 GSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTK 502
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG SW+E D+ ++H F A D THP E+ + +L + + DGY P+L VLYDV +E
Sbjct: 503 EPGRSWVELDQ-IVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEE 561
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K+++L+ HSEKLALAFGL+ T G T+R++KNLRIC DCH F S++ R +++RD
Sbjct: 562 QKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDK 621
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH+ G CSCG+YW
Sbjct: 622 NRFHNIVGGVCSCGDYW 638
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LIV Y + A G+F+E+P ++ V+WTAM++ Y Q EA+ F M + E
Sbjct: 101 TRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 160
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ T ++++C + + IA + +++ VGS+L+DMY+K G I DA+
Sbjct: 161 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYE--SHMFVGSSLLDMYAKSGRICDAH 218
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV- 301
+F + +R+V + +++I G+A G A++LF + N VT+ VLTA S +
Sbjct: 219 GVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA 278
Query: 302 ----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + + + Y+ ++D+ + G + A ++ + MP E W A+L
Sbjct: 279 ALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP-ERTCISWNAML 337
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
E +M G E + +++ C I+ V + + P +V + + LI
Sbjct: 48 EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLP--SVYLRTRLIV 105
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
+Y+KC + DA +F M QRNV S+++MI ++ G A A+ LF +M++++T+PN T
Sbjct: 106 LYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 165
Query: 291 FIGVLTAC 298
F +LT+C
Sbjct: 166 FATILTSC 173
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 325/561 (57%), Gaps = 49/561 (8%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R+ F+++ + L+ + RGY +I L + G+ P +T S+L K
Sbjct: 85 MDHAHRM-FDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLK 143
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + + G+Q+H + LG ++YV T+I MY C + +R+VFD++ E VV
Sbjct: 144 ACARLKALEEGKQLHCLAVKLG-VGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV 202
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
A+ A++T +N++P EA+ F +Q +G
Sbjct: 203 -------------------------------AYNAIITSCARNSRPNEALALFRELQESG 231
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ VT++ +S+CA LG + W+ E + +GF V V +ALIDMY+KCGS+DD
Sbjct: 232 LKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFD--QYVKVNTALIDMYAKCGSLDD 289
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M +R+ ++S+MI+ +A HG AI + +M K + +P+ +TF+G+L ACSH
Sbjct: 290 AVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSH 349
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL YG+ PS HY CM+DLLGRAG LEEA K ++++P++P +W
Sbjct: 350 TGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWR 409
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LL +C H N E+A++ +FEL+ G+Y+ILSN+ A G WDDV+ +R+++ G
Sbjct: 410 TLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKG 469
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-D 467
K PG S +E + V+HEF +GD H ST + AL +L+ L+ GY P+ V Y D
Sbjct: 470 ALKVPGCSSIEVN-NVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYAD 528
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ DEEK+ +L HSEKLA+ +GLL T PG T+R++KNLR+C DCH S + GR+I+
Sbjct: 529 IEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQII 588
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFHHF+DGKCSCG+YW
Sbjct: 589 LRDVQRFHHFKDGKCSCGDYW 609
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK---C 235
A +E +++ +I C L +K +I + NN V + LI+ +
Sbjct: 29 AALEPPSSSILSLIPKCTSLRELK------QIQAYTIKTHQNNPTVLTKLINFCTSNPTI 82
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
S+D A+R+F + Q ++ +++M G+A AI L ++ + P+ TF +L
Sbjct: 83 ASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLL 142
Query: 296 TACSHVG-------LKCYGVSPST--DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC+ + L C V + Y C ++++ ++ A ++ +K+ EP
Sbjct: 143 KACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG-EPCV 201
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSN 386
+ A++ +C + P A L E L+P + + LS+
Sbjct: 202 VAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSS 245
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 315/556 (56%), Gaps = 47/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ W A+I GY+ G +++I + M+ + P T+ + AC
Sbjct: 217 RRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHT 276
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ I + GF S+L + N +I MY KCG +R++FD + E+DV+SW
Sbjct: 277 RSGELGKWI-GSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW--- 332
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ GY + EA+ FE M + V+ +
Sbjct: 333 ----------------------------NTMIGGYSYLSLYEEALALFEVMLRSNVKPND 364
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT +G++ ACA LG + WV + +N + ++LIDMY+KCG I+ A R+F
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYID-KNLRNSSNASLWTSLIDMYAKCGCIEAAERVF 423
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGL- 303
M RN+ S+++M+ GFAMHG A A+ LF +MV K +P+ +TF+GVL+AC+ GL
Sbjct: 424 RSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLV 483
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ YG+SP HY CM+DLL RA EEA +++ M +EP+G +WG+LL
Sbjct: 484 DLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLS 543
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ H E + A LF+LEP+ G +++LSNIYA AG WDDV+R+R L G+KK
Sbjct: 544 ACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKV 603
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG + +E D G +HEF GD HP I + L ++ L+ +G+ PN VLYD+ +E
Sbjct: 604 PGCTSIEID-GDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEW 662
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L HSEKLA++FGL+ T PG T+RI+KNLR+C +CH S++ REI+ RD
Sbjct: 663 KEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRN 722
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC + W
Sbjct: 723 RFHHFKDGFCSCNDCW 738
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 198/366 (54%), Gaps = 16/366 (4%)
Query: 10 EQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVS 69
+Q N F+W +LIRGY L S+ L+ M G+ P S T LFK+CT+
Sbjct: 89 QQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATH 148
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
G+Q+HA + L + +V ++I MY G + +R VFD+ RD VS+T LI Y
Sbjct: 149 EGKQLHAHALKLA-LHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
+ G ++ A LF+E+P+KD V+W AM++GYVQ+ + EAI F MQ A V + T+V
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
V+SAC + W+ +GFG +N+ + +ALIDMY KCG D A +F G++
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFG--SNLQLTNALIDMYCKCGETDIARELFDGIE 325
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
+++V S+++MI G++ A+ LF M+++ KPN VTF+G+L AC+ +G
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
K S + + ++D+ + GC+E A ++ M N W A+L +H
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMH 444
Query: 358 RNPEIA 363
+ E A
Sbjct: 445 GHAERA 450
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 332/560 (59%), Gaps = 25/560 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+ Q ++ WT+LI Y ++++ + +M GI P T+ A+ AC ++
Sbjct: 193 QLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-----PERDVV 120
D+ LG+ +H G TS+ V +I MY KCG G +++VFD + P+
Sbjct: 253 KDLELGRSLHLLVEEKGMPTSENLVV-ALIDMYAKCGDFGHAQQVFDALGRGPRPQ---- 307
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +I Y +G ++ A LF+E+ ++D + + +M+TGY+ + + REA+ F M+
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+V +++ACA LG ++ + E ++ +G+AL+DMY KCG +D+
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEA--DIYLGTALLDMYMKCGRVDE 425
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M +R+V ++++MI G A +G AA++ F M +PN V++I VLTACSH
Sbjct: 426 ATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSH 485
Query: 301 VGLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L Y + P +HY CM+DLLGR+G L+EA+ +V+ MP++PN +W
Sbjct: 486 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
++L AC++H++ ++AQ AA HL +LEPD+ G Y+ L NIY + W++ S++R L++
Sbjct: 546 SILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQ 605
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+KK GYS + G +H+F D +HP EI L ++ RL++ GY P + DV
Sbjct: 606 VKKTAGYSSITVA-GQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDV 664
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK++ L+ HSEKLA+AFGL+ +P V I KNLR+CEDCH + S++ REI+V
Sbjct: 665 DEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIV 724
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSC ++W
Sbjct: 725 RDRSRFHHFREGTCSCNDFW 744
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 37/299 (12%)
Query: 39 LYCSMRREGIGPVSFTLSALFKACTEVL---DVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
L+ MRR G+ P FT LFK + + L +HA + ++ +V N++I
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
MY++ G +R+ FDE+ +D V+WT LI A G + L ++ P++D ++WT+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
++ Y + + REA+ F+ M G+ D VT++ V+SACA+L ++ + + E G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 216 FGPINNVVVGSALIDMYSKCGS--------------------------------IDDAYR 243
N+VV ALIDMY+KCG +D A
Sbjct: 270 MPTSENLVV--ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARS 327
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+ R++ +++SM+ G+ G+ A+ LF M + + + + T + +LTAC+ +G
Sbjct: 328 LFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLG 386
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ + +W A++ Y+ G + + ++ M G+ TL ++ AC +
Sbjct: 175 RLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRI 234
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D LG+ + A + G + + ++ MY KCG +G +R+
Sbjct: 235 GDAKLGKWV-AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARR---------------- 277
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
LF+ + +D VAW+AM++GY Q + REA+ F MQ A VE +
Sbjct: 278 ---------------LFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPND 322
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+V V+SACA LG ++ WV ++G+AL+D Y+KCG IDDA F
Sbjct: 323 VTMVSVLSACAVLGALETGKWVHSYVRRKRLS--LTTILGTALVDFYAKCGCIDDAVEAF 380
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +N ++++++I G A +GR A++LF M + +P VTFIGVL ACSH L
Sbjct: 381 ESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVE 440
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ P +HY CMVDLLGRAG ++EA + + MP+EPN +W ALL +
Sbjct: 441 EGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +HRN I + A + L P G+Y++LSNIYASAG W D + VR+ +K G++K P
Sbjct: 501 CAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTP 560
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D GV+ EF A D HP EI Q + +++ R++ GY PN V +V + EK
Sbjct: 561 GCSLIELD-GVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREK 619
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+AFGL+ PGAT+R+ KNLR+C DCH S+V REIVVRD
Sbjct: 620 EVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNI 679
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 680 FHHFKDGTCSCNDYW 694
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 165/345 (47%), Gaps = 48/345 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIG-PV-SFTLSALFKACTEVLDVSLGQQIHAQ 77
+ L+R ++ GH +D++ L+ M P T + K+C+ + + +G+ + A
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ G +D +V +++I MY CG D+ +
Sbjct: 146 AVKRG-LVADRFVLSSLIHMYASCG-------------------------------DVAA 173
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A +F+ V W A+V Y++N E +E F+ M GV D VTLV V++AC +
Sbjct: 174 ARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGR 233
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+G K WV + G N + +AL+DMY+KCG I A R+F GM+ R+V ++S
Sbjct: 234 IGDAKLGKWVAGHVDEEGLA--RNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWS 291
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG---------- 307
+MI G+ + A+ LF +M +PN VT + VL+AC+ +G G
Sbjct: 292 AMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRK 351
Query: 308 -VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+S +T +VD + GC+++A++ E MPV+ N W AL+
Sbjct: 352 RLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 395
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 334/561 (59%), Gaps = 24/561 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT+L Y+ G + + ++ M G+ P T+S++ AC E+
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G++IH + G +L+V + ++ +Y KC + +R VFD MP RDVVSW +
Sbjct: 279 KDLKSGKEIHGFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGV 337
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ AY N + E LF ++ D+ W A++ G ++N + EA+E F +MQ G
Sbjct: 338 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGF 397
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + +T+ ++ AC+ ++ + C + G + + +AL+ MY+KCG ++
Sbjct: 398 KPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST---TALLYMYAKCGDLNL 454
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ +F M++++V ++++MI+ AMHG A+ LF M+ + +PN VTF GVL+ CSH
Sbjct: 455 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 514
Query: 301 VGLKCYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L GV P +HY+C+VD+ RAG L EA K ++ MP+EP WG
Sbjct: 515 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 574
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALL AC++++N E+A+I+A LFE+EP+ GNY+ L NI +A MW + S+VR L+K G
Sbjct: 575 ALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERG 634
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+ K PG SWL+ G++ +H F GD ++ S +I L +L+++++ GY+P+ VL D
Sbjct: 635 ITKTPGCSWLQVGNK--VHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQD 692
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK L HSEKLA+AFG+L + +T+R+ KNLRIC DCH + S+V+G IV
Sbjct: 693 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIV 752
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD++RFHHF++G CSC + W
Sbjct: 753 VRDSLRFHHFKNGNCSCKDLW 773
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI N GD A LF+ +P D + +++ + EAI+ + +Q G++
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + ACA G V + + + G +++V VG+ALI Y KC ++ A R
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHD--DATRCGVMSDVFVGNALIHAYGKCKCVEGARR 220
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-- 301
+F + R+V S++S+ + G + +F +M + KPN +T +L AC+ +
Sbjct: 221 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 280
Query: 302 ---GLKCYGVSPS----TDHYAC--MVDLLGRAGCLEEALKMVEKMP 339
G + +G + + + C +V L + + EA + + MP
Sbjct: 281 LKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP 327
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/554 (39%), Positives = 312/554 (56%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q++ K+ WT+LI GY ++I L M + P FT ++L KA
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D G+QIHA + G + D+YVG+ ++ MY +CG
Sbjct: 166 ADSGTGRQIHALAVKCG-WHEDVYVGSALLDMYARCG----------------------- 201
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F++L K+ V+W A+++G+ + A+ F M G E +
Sbjct: 202 --------KMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATH 253
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V S+ A+LG ++ WV S VG+ L+DMY+K GS+ DA ++F
Sbjct: 254 FTYSSVFSSIARLGALEQGKWVHAHVIKSR--QKLTAFVGNTLLDMYAKSGSMIDARKVF 311
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +++ +++SM+ FA +G A+ F +M K+ N +TF+ +LTACSH GL
Sbjct: 312 DRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVK 371
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y + P DHY +V LLGRAG L AL + KMP+EP VWGALL AC
Sbjct: 372 EGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAAC 431
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N ++ Q AA+H+FEL+PD G ++L NIYAS G WD +RVR ++K TG+KK P
Sbjct: 432 RMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPA 491
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP + EI + G++ +++ +GY P++ VL V D+EK+
Sbjct: 492 CSWVEMENSV-HMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKE 550
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLALAF L+ GAT+RIMKN+RIC DCH S+V GREIVVRD RF
Sbjct: 551 ANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRF 610
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSCG+YW
Sbjct: 611 HHFSSGSCSCGDYW 624
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGG--FTSDLYVGNTMIGMYVKCGFLG 105
+ P + AC + ++ ++IHA LG F D ++ N++I MY KC +
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAH---LGSSRFAGDAFLDNSLIHMYCKCRSVL 103
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+R VFD+M +D+VSWT LI GY QN
Sbjct: 104 DARNVFDQMRRKDMVSWTSLI-------------------------------AGYAQNDM 132
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
P EAI M + + T ++ A + +A G+ +V VG
Sbjct: 133 PVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWH--EDVYVG 190
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
SAL+DMY++CG +D A +F + +N S++++I GFA G +A+ F +M++ +
Sbjct: 191 SALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFE 250
Query: 286 PNGVTFIGVLTACSHVG 302
T+ V ++ + +G
Sbjct: 251 ATHFTYSSVFSSIARLG 267
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
I+ACAQ ++ A + S F + + ++LI MY KC S+ DA +F M+++
Sbjct: 58 ITACAQSKNLEDARKIHAHLGSSRFA--GDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----SHVGLKCY 306
++ S++S+I G+A + AI L M+K KPNG TF +L A S G + +
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175
Query: 307 GVSPS----TDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ D Y + ++D+ R G ++ A + +K+ + NG W AL+
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALI 225
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/592 (35%), Positives = 336/592 (56%), Gaps = 54/592 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N + +IR Y+ D++ ++ M G P +T + KAC+
Sbjct: 87 RNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCS 146
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +G Q+H + G +L+VGN +I +Y KCG L +R V DEM +DVVSW +
Sbjct: 147 DNLRIGLQLHG-AVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSM 205
Query: 126 IVAYANNGDMESA-------------------------------------GGLFNELPLK 148
+ YA N + A +F L K
Sbjct: 206 VAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKK 265
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
V+W M++ Y++N+ P ++++ + +M VE D +T V+ AC L + +
Sbjct: 266 SLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIH 325
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E E P N+++ ++LIDMY++CG ++DA R+F MK R+V S++S+I + M G+
Sbjct: 326 EYVERKKLCP--NMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQ 383
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYA 316
+ A+ LF +M + P+ + F+ +L+ACSH GL Y ++P +H+A
Sbjct: 384 GYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFA 443
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
C+VDLLGR+G ++EA ++++MP++PN VWGALL +C+++ N +I +AA+ L +L P+
Sbjct: 444 CLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPE 503
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
+ G Y++LSNIYA AG W +V+ +R L+K ++K PG S +E + V H F AGD HP
Sbjct: 504 ESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQV-HTFLAGDTYHP 562
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
S EI + L L+ +++ GY P S L+DV +E+K+ L HSEKLA+ F +L T
Sbjct: 563 QSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE- 621
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ +RI KNLR+C DCH+ S+++ REIV+RD RFHHF+DG CSCG+YW
Sbjct: 622 SPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 163/389 (41%), Gaps = 71/389 (18%)
Query: 38 SLYCSMRREGIGPVS--FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
+L S+R+ + P + L L K + D+ + +H++ L F + +G ++
Sbjct: 16 ALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLS-FHENPSLGIKLM 74
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
Y G G +R VFD +PER+V+ + +I +Y NN + A +F +
Sbjct: 75 RAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRD----------- 123
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
MV+G G D+ T V+ AC+ ++ + G+
Sbjct: 124 MVSG--------------------GFSPDHYTYPCVLKACSCSDNLRIGLQL----HGAV 159
Query: 216 F--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
F G N+ VG+ LI +Y KCG + +A + M+ ++V S++SM+ G+A + + A+
Sbjct: 160 FKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDAL 219
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGV---------SPSTDHYACMVDLLGR 324
+ +M KP+ T +L A ++ + S + M+ + +
Sbjct: 220 DICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMK 279
Query: 325 AGCLEEALKMVEKM---PVEPNGGVWGALLGAC----------QIHRNPEIAQIAANHLF 371
+++ + +M VEP+ ++L AC +IH E ++ N L
Sbjct: 280 NSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLL 339
Query: 372 ELEPDKIGNYIILSNIYASAGMWDDVSRV 400
E N +I ++YA G +D RV
Sbjct: 340 E-------NSLI--DMYARCGCLEDAKRV 359
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/629 (35%), Positives = 330/629 (52%), Gaps = 87/629 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S ++F+ + KN FLW +IRGY G S+ LY M G +FT + KAC
Sbjct: 112 SQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKAC 171
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGN------------------------------ 92
++L V +G+++H++ ++ G SD+YVGN
Sbjct: 172 GDLLLVEIGRRVHSEVVVCG-LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSW 230
Query: 93 -TMIGMYVKCGFLGCSRKVFDEMPERDVVS------------------------------ 121
TMI Y K G + VFD M + + +
Sbjct: 231 NTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVR 290
Query: 122 ----------WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
LI Y N M A LF + KD V+W +M+ GY +N E++
Sbjct: 291 NSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLR 350
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F RM G D VT + V+ AC Q+ ++Y + GF N +VG+AL+DM
Sbjct: 351 LFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDA--NTIVGTALVDM 408
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
YSKCGS+ + R+F M +++ S+S+M+ G+ +HGR AI + M P+ F
Sbjct: 409 YSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVF 468
Query: 292 IGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+L+ACSH GL K Y V P+ HY+CMVDLLGRAG L+EA ++ M
Sbjct: 469 TSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTME 528
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
++P +W ALL A ++H+N ++A+I+A +F++ P + +YI LSNIYA+ WDDV R
Sbjct: 529 IKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVER 588
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR +++ GLKK+PG S++E D ++H F GD +H + +I L +L +L+ GY+P
Sbjct: 589 VRAMVRRKGLKKSPGCSFIELD-NMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKP 647
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+ V YDV +E K+++L HSE+LA+AF L+ T PG +RI KNLR+C DCH S
Sbjct: 648 DTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLIS 707
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ GREI++RD RFHHF G CSCG+YW
Sbjct: 708 ELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 134/324 (41%), Gaps = 48/324 (14%)
Query: 30 QGHLKDSISLYCSMRREGIGP---VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS 86
QG + + SMR + S AL ++ T GQQ+HA I +
Sbjct: 34 QGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILEN 93
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
+ Y+ + Y CG M A +F+ +
Sbjct: 94 NTYLNTKLAAFYAGCGL-------------------------------MSQAEVIFDGIV 122
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
LK+ W M+ GY N P +++ + M G D T V+ AC L +++
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR 182
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V +E G +++ VG++L+ MY+K G + A +F M +R++ S+++MI G+A +
Sbjct: 183 VH--SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKN 240
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHY---- 315
+ A +F M K + T +G+L+AC+ + + Y V S +Y
Sbjct: 241 ADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFF 300
Query: 316 -ACMVDLLGRAGCLEEALKMVEKM 338
++++ C+ +A ++ E++
Sbjct: 301 TNSLIEMYCNCNCMVDARRLFERV 324
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/553 (39%), Positives = 324/553 (58%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ N FLW LIR Y G + +ISLY M G+ P +FTL + KAC+ +
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ IH + ++ G+ D++VG ++ MY KCG + +R VFD++ +RD V W ++
Sbjct: 175 IGEGRVIH-ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLA 233
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA NG P E++ M GV T
Sbjct: 234 AYAQNG-------------------------------HPDESLSLCCEMAAKGVRPTEAT 262
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VIS+ A + + + + GF N V +ALIDMY+KCGS+ A +F
Sbjct: 263 LVTVISSSADIACLPHGREIHGFGWRHGFQ--YNDKVKTALIDMYAKCGSVKVACVLFER 320
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
++++ V S++++I G+AMHG A A+ LF M+K E +P+ +TF+G L ACS L G
Sbjct: 321 LREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEG 379
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
++P+ +HY CMVDLLG G L+EA ++ +M V P+ GVWGALL +C+
Sbjct: 380 RALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCK 439
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+A++A L ELEPD GNY+IL+N+YA +G W+ V+R+R+L+ G+KKN
Sbjct: 440 THGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIAC 499
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + ++ F +GD++HPNS I L L ++ GY P+ SV +DV ++EK
Sbjct: 500 SWIEV-KNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTD 558
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
++ +HSE+LA+AFGL++T PG + I KNLRICEDCH+ + S++ REI VRD R+H
Sbjct: 559 MVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYH 618
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSCG+YW
Sbjct: 619 HFRHGLCSCGDYW 631
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 151/338 (44%), Gaps = 47/338 (13%)
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
+ ++L ++C + G+Q+HA+ LG +L + ++ Y C L + +FD
Sbjct: 59 YYYASLLESCISAKALEPGKQLHARLCQLG-IAYNLDLATKLVNFYSVCNSLRNAHHLFD 117
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
++P+ ++ W LI AYA NG E+A L++++ +EY
Sbjct: 118 KIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM------------------------LEY 153
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
G++ D TL V+ AC+ L I + E SG+ +V VG+AL+DMY
Sbjct: 154 -------GLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWE--RDVFVGAALVDMY 204
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG + DA +F + R+ ++SM+ +A +G ++ L +M +P T +
Sbjct: 205 AKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLV 264
Query: 293 GVLT-----ACSHVGLKC------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
V++ AC G + +G + ++D+ + G ++ A + E++ E
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLR-E 323
Query: 342 PNGGVWGALLGACQIH-RNPEIAQIAANHLFELEPDKI 378
W A++ +H E + + E +PD I
Sbjct: 324 KRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHI 361
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 39/271 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ LW +++ Y GH +S+SL C M +G+ P TL + + ++
Sbjct: 214 RHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADI 273
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH GF + V +I MY KCG + + +F+ + E+ VVSW +
Sbjct: 274 ACLPHGREIHGFG-WRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAI 332
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I TGY + EA++ FERM + D+
Sbjct: 333 I-------------------------------TGYAMHGLAVEALDLFERMMKEA-QPDH 360
Query: 186 VTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T VG ++AC++ ++ + + P V + ++D+ CG +D+AY +
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRINP--TVEHYTCMVDLLGHCGQLDEAYDL 418
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
++Q +V S + + H ++L
Sbjct: 419 ---IRQMDVMPDSGVWGALLNSCKTHGNVEL 446
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 325/566 (57%), Gaps = 30/566 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R + + + Y W A+I GY+ +G +++ + M GI +T ++L AC
Sbjct: 237 RELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSC 296
Query: 66 LD----VSLGQQIHA---QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ + G+Q+H +T++ L V N +I Y K + +R+VFD+MP RD
Sbjct: 297 NEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRD 356
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
++SW ++ Y N +E A +F+E+P ++ + WT M++G QN E ++ F +M+
Sbjct: 357 IISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKS 416
Query: 179 AGVETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
G+E G I+AC+ LG + + + V + SG G+ALI MYS+
Sbjct: 417 EGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLS------AGNALITMYSR 470
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG ++ A +F+ M + S+++MI A HG AI+LF M+K + P+ +TF+ +
Sbjct: 471 CGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTI 530
Query: 295 LTACSHVGL----------KC--YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
LTAC+H GL C YG++P DHYA ++DLL RAG +A +++ MP E
Sbjct: 531 LTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEA 590
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
+W ALL C+IH N E+ AA+ L EL P + G YIILSN+YA+ G WD+V+RVR
Sbjct: 591 GAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRL 650
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
L++ G+KK PG SW+E + ++H F D HP + L L++ ++ GY P+ +
Sbjct: 651 LMRERGVKKEPGCSWVEVE-NMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTK 709
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
VL+D+ E K+ L THSEKLA+ +G++ GAT+R+ KNLRIC DCH S+V+
Sbjct: 710 FVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVV 769
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
REIVVRD RFHHF++G+CSCGNYW
Sbjct: 770 EREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 177/432 (40%), Gaps = 72/432 (16%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG-QQIHAQT 78
+ A+I Y +++L+ M+R G P FT S++ A + + D Q +H +
Sbjct: 107 YNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEV 166
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCG---------FLGCSRKVFDEMPERDVV--SWTELIV 127
I LG V N ++ YV C + +RKVFDE P+ + SWT +I
Sbjct: 167 IKLGTLLIP-SVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIA 225
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y N D+ +A L + L VAW AM++GYV+ EA + F RM G++ D T
Sbjct: 226 GYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYT 285
Query: 188 LVGVISACA----QLGVIK-------------------------------YANWVCEIAE 212
+ISAC ++G+ Y + I
Sbjct: 286 YTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEA 345
Query: 213 GSGFG--PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
F P+ +++ +A++ Y I++A IF M +RNV +++ MI G A +G
Sbjct: 346 RRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGE 405
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
++LF M +P F G +TACS H + G ++
Sbjct: 406 EGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALI 465
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------L 373
+ R G +E A + MP + W A++ A H + + A LFE +
Sbjct: 466 TMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHGH----GVKAIELFEQMMKEDI 520
Query: 374 EPDKIGNYIILS 385
PD+I IL+
Sbjct: 521 LPDRITFLTILT 532
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 50/303 (16%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
+ + +HA IL GF + ++ N +I +Y K + +RK+FD++P+ D+V+ T L+ AY
Sbjct: 23 IARAVHAH-ILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAY 81
Query: 130 ANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+++G+++ A LFN PL +D V++ AM+T Y A+ F +M+ G D T
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 188 LVGVISACAQLGVIKYANWVCEI--AEGSGFGPINNVVVGSALIDMYSKCGS-------- 237
V+SA L +I C++ E G + V +AL+ Y C S
Sbjct: 142 FSSVLSA---LSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQ 198
Query: 238 -IDDAYRIFVGMKQRNVF--SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
+ A ++F + ++ S+++MI G+ + D+V +G+T+
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRN----------DDLVAARELLDGLTY--- 245
Query: 295 LTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEA---LKMVEKMPVEPNGGVWGALL 351
P + M+ R G EEA + + M ++ + + +L+
Sbjct: 246 ---------------PIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLI 290
Query: 352 GAC 354
AC
Sbjct: 291 SAC 293
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 320/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKA 61
SF +F Q++ N F W +IRG+ + ++ L+ M I P + T LFKA
Sbjct: 86 SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+++DVSLG+ IH+ ++ GF S +V N+++ MY GF
Sbjct: 146 VAKLMDVSLGEGIHS-VVVRNGFDSLRFVQNSLVHMYSVFGF------------------ 186
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
ESA +F + +D+VAW +++ G+ N P EA+ + M GV
Sbjct: 187 -------------AESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGV 233
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E D T+V ++SAC +LG + V G + N +AL+D+YSKCG+ DA
Sbjct: 234 EPDGFTMVSLLSACVELGALALGERVHMYMVKVGL--VQNQHASNALLDLYSKCGNFRDA 291
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R+V S++S+I+G A++G + A++LFG++ + KP+ +TF+GVL ACSH
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G+ + YG+ P +H+ CMVDLL RAG + +A + MPV PN +W
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC IH + E+ ++A + LE G++++LSN+YAS W DV VR+++ M G+
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PGYS +E + ++EF GD +HP S E L + L+ +GY P +VL D+
Sbjct: 472 KKTPGYSLVEL-KNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIE 530
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L H+EK+A+AF L+ T PG +RIMKNLR+C DCHL + S+V REI+VR
Sbjct: 531 EEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVR 590
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +YW
Sbjct: 591 DRSRFHHFKDGSCSCKDYW 609
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 15/232 (6%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVG 190
+ M A +FN++ + W M+ G+ ++ P A+E F +M A + D T
Sbjct: 82 SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF 141
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
+ A A+L + + + +GF + V ++L+ MYS G + AY++F M
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLR--FVQNSLVHMYSVFGFAESAYQVFEIMSY 199
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--- 307
R+ +++S+I GFA++G + A+ L+ +M +P+G T + +L+AC +G G
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259
Query: 308 ------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
V + +A ++DL + G +A K+ ++M E + W +L+
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLI 310
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 323/558 (57%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKAC 62
+ R +F V KN W+A+I GY+L + D+++LY M G+ P TL+ + +AC
Sbjct: 263 YARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRAC 322
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ D+ G+++H I G D VGN++I MY KCG
Sbjct: 323 AQLTDLKRGKKLHCHMIK-SGMDLDTTVGNSLISMYAKCGI------------------- 362
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
M++A G +E+ KD V+++A+++G VQN +A+ F +MQ +G+
Sbjct: 363 ------------MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA 410
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T++ ++ AC+ L +++ GF N+ + +A+IDMYSKCG I +
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGYTVVRGF--TNDTSICNAIIDMYSKCGKITISR 468
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M+ R++ S+++MI+G+ +HG A+ LF ++ KP+ VT I VL+ACSH G
Sbjct: 469 EIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSG 528
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + + + P HY CMVDLL RAG L+EA +++MP PN +WGAL
Sbjct: 529 LVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGAL 588
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+ H+N E+ + + + L P+ GN++++SNIY+S G WDD + +R + + G K
Sbjct: 589 LAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYK 648
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E GVIH F G +HP S I + L +LL +++ GY+ + VL+DV +
Sbjct: 649 KSPGCSWVEIS-GVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEE 707
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++IL+ HSEK+A+AFG+L TSP + + + KNLRIC DCH + + + REI VRD
Sbjct: 708 EEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRD 767
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG C+C ++W
Sbjct: 768 ASRFHHFKDGICNCQDFW 785
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 49/365 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+Q+ + LW +IR Y G + SI LY M + G+ P +FT L KAC+
Sbjct: 59 LARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACS 118
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVS 121
+ + LG+ IH +L G + DLYV ++ MY KCG L ++ +F+ + +RD+V+
Sbjct: 119 SLQALQLGRLIHTHAHIL-GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVA 177
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I A++ F+ L + I +MQ AGV
Sbjct: 178 WNAMIAAFS-----------FHAL--------------------HAQTIHSVAQMQQAGV 206
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ TLV ++ Q + + + F +NVV+ +AL+DMY+KC + A
Sbjct: 207 TPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF--FDNVVLQTALLDMYAKCHLLFYA 264
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSH 300
+IF + ++N +S+MI G+ +H A+ L+ DM+ P T +L AC+
Sbjct: 265 RKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQ 324
Query: 301 V-------GLKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L C+ G+ T ++ + + G ++ A+ +++M + + + A
Sbjct: 325 LTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSA 383
Query: 350 LLGAC 354
++ C
Sbjct: 384 IISGC 388
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L + + +++ A +F+++P V W M+ Y + +++I + M GV
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T ++ AC+ L ++ + A G ++ V +AL+ MY+KCG + A
Sbjct: 105 PTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLS--MDLYVSTALLHMYAKCGHLYQAQ 162
Query: 243 RIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+F + + R++ ++++MI F+ H I M + PN T + +L
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/614 (37%), Positives = 345/614 (56%), Gaps = 69/614 (11%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S R F+ + +N WTA++RGY+ +G + ++ +L+ M + + + L L +
Sbjct: 93 MVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQ 152
Query: 61 A-----CTEVLDVSLGQQIHAQTILLGGFTSDLYVG-----------------NTMIGMY 98
+ D+ + + A+T ++ G+ + + TMI Y
Sbjct: 153 VRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGY 212
Query: 99 VKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVT 158
V+ G + +RK+F+ MPE++ VSWT +++ Y G +E A LF+ +P+K VA AM+
Sbjct: 213 VQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMIL 272
Query: 159 GYVQN---AKPR----------------------------EAIEYFERMQYAGVETDYVT 187
G+ QN AK R EA+ F MQ GV++++ +
Sbjct: 273 GFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPS 332
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L+ V+S CA L + + V S F ++V V S LI MY KCG + A +IF
Sbjct: 333 LISVLSVCASLASLDHGRQVHAELVKSQFD--SDVFVASVLITMYVKCGDLVKARQIFDR 390
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
+++ ++S+I G+A HG A+Q+F +M + +GVTF+GVL+ACS+ G
Sbjct: 391 FSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEG 450
Query: 303 ------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+K Y V P T+HYACMVDLLGRAG + +A+ +++KMPVE + +WGALLGAC+
Sbjct: 451 LEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACR 510
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N +A++AA L +LEP G YI+LSNIYAS G W DV+ +RR +++ + K+PG
Sbjct: 511 THMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGC 570
Query: 416 SWLEGDRGVIHEFRAGDLT-HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E ++ V H F G T HP + I + L L L+ GY P+ VL+DV +EEK
Sbjct: 571 SWIEVEKRV-HMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKV 629
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
R L HSE+LA+AFGLL G +R+MKNLR+C DCH + +++ GREI++RD RF
Sbjct: 630 RSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRF 689
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC +YW
Sbjct: 690 HHFKDGFCSCRDYW 703
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 25/328 (7%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N+ I Y + G + +R+VFDEMP++ +VSW ++ Y N A LF+++P ++ V
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN---WVC 208
+W +++GYV+N EA + F+ M E + V+ ++ Q G++ A W
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
P NVV + ++ + ID+A +F M ++V + ++MI G+ GR
Sbjct: 136 ---------PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGR 186
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIG-VLTACSHVGLKCYGVSPSTDHYACMVDLLG--RA 325
A +LF +M + G V V K + V P + + L+G +
Sbjct: 187 LAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQG 246
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF-ELEPDKIGNYIIL 384
G +EEA ++ + MPV+ +LG Q N E+A+ A +F ++ G + +
Sbjct: 247 GRIEEASELFDAMPVKAVVACNAMILGFGQ---NGEVAK--ARQVFDQIREKDDGTWSAM 301
Query: 385 SNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+Y G + + L++ G++ N
Sbjct: 302 IKVYERKGFEVEALNLFALMQREGVQSN 329
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 50/274 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ K W +++ GY +++ L+ M P T+S
Sbjct: 36 RRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------PERNTVS--------- 80
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
N +I YVK + +RK FD MPER+VVSWT +
Sbjct: 81 -------------------------WNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAM 115
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y G + A LF ++P K+ V+WT M+ G +Q + EA F+ M D
Sbjct: 116 VRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPV----KDV 171
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V +IS Q G + E E P NV+ + +I Y + G +D A ++F
Sbjct: 172 VARTNMISGYCQEGRL------AEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLF 225
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
M ++N S+++M++G+ GR A +LF M
Sbjct: 226 EVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAM 259
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/626 (35%), Positives = 335/626 (53%), Gaps = 84/626 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF+ + ++ LW +I G + DSI L+ M +G+ S T++A+ A
Sbjct: 161 YARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA 220
Query: 64 EVLDVSLGQQIHAQTILLG-GFTS-----------------------------DLYVGNT 93
E+ ++ +G I + +G GF DL N
Sbjct: 221 ELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNA 280
Query: 94 MIGMYVKCGFLGCSRKVFDEM---PERDVVSW---------------------------- 122
MI + G CS K+F E+ ER S
Sbjct: 281 MISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSG 340
Query: 123 --------TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
T Y +++ A LF+E P K VAW AM++GY QN AI F+
Sbjct: 341 IILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFK 400
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M + VT+ ++SACAQLG + + WV + + P N+ V +AL+DMY+K
Sbjct: 401 EMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEP--NIYVSTALVDMYAK 458
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG+I +A+++F M ++N ++++MI G+ +HG H A++L+ +M+ P+ VTF+ V
Sbjct: 459 CGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSV 518
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L ACSH GL Y + P +HYACMVD+LGR+G LE+AL+ ++KMPVEP
Sbjct: 519 LYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEP 578
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
VWG LLGAC IH++ +IA++A+ LFEL+P +G Y++LSNIY+ + + +R+
Sbjct: 579 GPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQ 638
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
++K L K+PG + +E + G H F +GD +H ++T+I L L +++ GYQ
Sbjct: 639 VVKKRKLAKSPGCTLIEVN-GTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETV 697
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
L+DV +EEK+ + HSEKLA+AFGL+TT PG +RI+KNLR+C DCH S++
Sbjct: 698 PALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKIT 757
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
R IVVRD RFHHF+DG CSCG+YW
Sbjct: 758 ERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 150/304 (49%), Gaps = 41/304 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R +F V + FL+ L+RG+ L SISLY +RR + P +FT + AC+
Sbjct: 64 RALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSN 123
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ L +HA +I+ G+ S+++VG+ ++ +Y K + +RKVFD MPERD V W
Sbjct: 124 DKHLML---LHAHSII-DGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW-- 177
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
M+ G V+N ++I+ F M GV D
Sbjct: 178 -----------------------------NTMINGLVKNCCFDDSIQLFREMVADGVRVD 208
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ A A+L +K + +A GFG + V+ G LI +YSKCG ++ A +
Sbjct: 209 SSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTG--LISLYSKCGDVNTARLL 266
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---HV 301
F + + ++ +Y++MI GF +G +++LF +++ + + + T +G++ S H+
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326
Query: 302 GLKC 305
L C
Sbjct: 327 HLAC 330
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 308/546 (56%), Gaps = 43/546 (7%)
Query: 16 NPFLWTALIRGYILQGHLK-DSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+ FL+ LIR + H K ++ Y +MRR + P FT + KAC ++ + LG +
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAV 249
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA + G F D +V NT++ MY C G S V
Sbjct: 250 HASMVKFG-FEEDPHVRNTLVHMYCCCCQDGSSGPV------------------------ 284
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
SA +F+E P+KD V W+AM+ GY + A+ F MQ GV D +T+V V+SA
Sbjct: 285 --SAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSA 342
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA LG ++ W+ E + +V + +ALIDM++KCG +D A ++F MK R +
Sbjct: 343 CADLGALELGKWLESYIERKNI--MRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIV 400
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++SMI+G AMHGR A+ +F +M++ P+ V FIGVL+ACSH GL
Sbjct: 401 SWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTM 460
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
+ + P +HY CMVD+L RAG + EAL+ V MPVEPN +W +++ AC ++
Sbjct: 461 ENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKL 520
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ A L EP NY++LSNIYA W+ ++VR ++ + G++K PG + +E +
Sbjct: 521 GESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNN 580
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
I+EF AGD +H EI + + ++ ++ GY P VL D+ +E+K+ L HSE
Sbjct: 581 E-IYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSE 639
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+AF LL+T PG +RI+KNLR+CEDCH S+V REIVVRD RFHHF++G C
Sbjct: 640 KLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLC 699
Query: 543 SCGNYW 548
SCG++W
Sbjct: 700 SCGDFW 705
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++ K+ W+A+I GY G+ +++L+ M+ G+ P T+ ++ AC ++
Sbjct: 289 VFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGA 348
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ + + I + + N +I M+ KCG + + KVF EM R +VSWT +IV
Sbjct: 349 LELGKWLESY-IERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIV 407
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +G GL EA+ F+ M GV+ D V
Sbjct: 408 GLAMHGR-----GL--------------------------EAVLVFDEMMEQGVDPDDVA 436
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+GV+SAC+ G++ ++ E F + + ++DM S+ G +++A
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTMENM-FSIVPKIEHYGCMVDMLSRAGRVNEALEFVRA 495
Query: 248 M 248
M
Sbjct: 496 M 496
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 332/564 (58%), Gaps = 42/564 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
RLVF+ V + LW A+I GY H + ++ L+ M G+ + T+S++ A
Sbjct: 272 RLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVR 331
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+S + IH ++ G ++ Y+ N +I MY + G + S+++FD M +RD+VSW
Sbjct: 332 CEGISRKEGIHGY-VIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNT 390
Query: 125 LIVAYANNGDMESAGGLFNELP-LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I +Y G A L +E+ +++K + +Y + Q +
Sbjct: 391 IITSYVICGRSSDALLLLHEMQRIEEKSTYDG---------------DYNDEKQVP-FKP 434
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ +TL+ V+ CA L + + A + + V VGSAL+DMY+KCG ++ A R
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNLLA--SQVTVGSALVDMYAKCGCLNLARR 492
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-----ETKPNGVTFIGVLTAC 298
+F M RNV +++ +I+ + MHG+ +++LF DMV E KP VTFI + +C
Sbjct: 493 VFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASC 552
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-G 345
SH G+ +G+ P+ DHYAC+VDL+GRAG +EEA +V MP + G
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG 612
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
W +LLGAC+I+ N EI +IAA +L +L+PD +Y++LSNIY+SAG+WD +RR +K
Sbjct: 613 AWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMK 672
Query: 406 MTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
G+KK PG SW+E GD +H+F AGDL+HP S ++ L L +RL+ +GY P+ V
Sbjct: 673 AMGVKKEPGCSWIEYGDE--VHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACV 730
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+D+ +EEK+ IL HSEKLA+AFG+L T PG T+R+ KNLR+C DCH S++ R
Sbjct: 731 LHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDR 790
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI++RD RFHHF+DG CSCG+YW
Sbjct: 791 EIILRDARRFHHFKDGTCSCGDYW 814
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 47/320 (14%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLG 105
G P +F A+ KA + ++ LG+QIHA G G S + + NT++ MY KCG LG
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+ KVFD + ER D+V+W ++++ + +
Sbjct: 65 DAYKVFDRITER-------------------------------DQVSWNSIISALCRFEE 93
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVV 224
AI+ F M G E TLV + AC+ L + W+ + G F +
Sbjct: 94 WEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRK-RDGLWLGKQIHGCCFRKGHWRTFS 152
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
+AL+ MY+K G +DDA + V + R++ +++SMI F+ + R A+ MV
Sbjct: 153 NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGV 212
Query: 285 KPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY-------ACMVDLLGRAGCLEEAL 332
KP+GVTF VL ACSH+ G + + + TD + +VD+ G +E
Sbjct: 213 KPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESG- 271
Query: 333 KMVEKMPVEPNGGVWGALLG 352
++V ++ G+W A++
Sbjct: 272 RLVFDSVLDRKIGLWNAMIA 291
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 183/431 (42%), Gaps = 69/431 (16%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++I + +++ M EG+ P T +++ AC+ + + G++IHA +
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ +VG+ ++ MY CG + R VFD + +R + W +I YA + E A
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF E+ AG+ ++ T+ ++ A +
Sbjct: 304 MLFIEMEAA------------------------------AGLYSNATTMSSIVPAYVRCE 333
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + G N + +ALIDMYS+ G I + RIF M+ R++ S++++
Sbjct: 334 GISRKEGIHGYVIKRGLE--TNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTI 391
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTET----------------KPNGVTFIGVLTACSHVGL 303
I + + GR+ A+ L +M + E KPN +T + VL C+ +
Sbjct: 392 ITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSA 451
Query: 304 KCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G ++ + +VD+ + GCL A ++ ++MP+ N W ++
Sbjct: 452 LAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIM 510
Query: 353 ACQIH-RNPEIAQIAANHLF------ELEPDKIGNYIILSNIYASAGMWDD-VSRVRRLL 404
A +H + E ++ + + E++P ++ +I L + +GM D+ +S ++
Sbjct: 511 AYGMHGKGKESLELFEDMVAEGAKGGEVKPTEV-TFIALFASCSHSGMVDEGLSLFHKMK 569
Query: 405 KMTGLKKNPGY 415
G++ P +
Sbjct: 570 NEHGIEPAPDH 580
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 57/350 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W ++I + +I + M EG P SFTL ++ AC+ +
Sbjct: 69 VFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRK 128
Query: 68 ---VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG+QIH G + + + N ++ MY K G L ++ + +RD+V+W
Sbjct: 129 RDGLWLGKQIHGCCFRKGHWRT--FSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTW-- 184
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+M++ + QN + EA+ + M GV+ D
Sbjct: 185 -----------------------------NSMISSFSQNERFMEALMFLRLMVLEGVKPD 215
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT V+ AC+ L +++ + A + I N VGSAL+DMY CG ++ +
Sbjct: 216 GVTFASVLPACSHLDLLRTGKEIHAYALRTD-DVIENSFVGSALVDMYCNCGQVESGRLV 274
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGL 303
F + R + +++MI G+A A+ LF +M N T ++ A +
Sbjct: 275 FDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY----V 330
Query: 304 KCYGVSP-------------STDHY--ACMVDLLGRAGCLEEALKMVEKM 338
+C G+S T+ Y ++D+ R G ++ + ++ + M
Sbjct: 331 RCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSM 380
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 334/561 (59%), Gaps = 24/561 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT+L Y+ G + + ++ M G+ P T+S++ AC E+
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G++IH + G +L+V + ++ +Y KC + +R VFD MP RDVVSW +
Sbjct: 193 KDLKSGKEIHGFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGV 251
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ AY N + E LF ++ D+ W A++ G ++N + EA+E F +MQ G
Sbjct: 252 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGF 311
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + +T+ ++ AC+ ++ + C + G + + +AL+ MY+KCG ++
Sbjct: 312 KPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST---TALLYMYAKCGDLNL 368
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ +F M++++V ++++MI+ AMHG A+ LF M+ + +PN VTF GVL+ CSH
Sbjct: 369 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 428
Query: 301 VGLKCYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L GV P +HY+C+VD+ RAG L EA K ++ MP+EP WG
Sbjct: 429 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 488
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALL AC++++N E+A+I+A LFE+EP+ GNY+ L NI +A MW + S+VR L+K G
Sbjct: 489 ALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERG 548
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+ K PG SWL+ G++ +H F GD ++ S +I L +L+++++ GY+P+ VL D
Sbjct: 549 ITKTPGCSWLQVGNK--VHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQD 606
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK L HSEKLA+AFG+L + +T+R+ KNLRIC DCH + S+V+G IV
Sbjct: 607 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIV 666
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD++RFHHF++G CSC + W
Sbjct: 667 VRDSLRFHHFKNGNCSCKDLW 687
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI N GD A LF+ +P D + +++ + EAI+ + +Q G++
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + ACA G V + + + G +++V VG+ALI Y KC ++ A R
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHD--DATRCGVMSDVFVGNALIHAYGKCKCVEGARR 134
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F + R+V S++S+ + G + +F +M + KPN +T +L AC+ +
Sbjct: 135 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 313/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G ++S+ + MRREG+ P F L ++F+ C +
Sbjct: 189 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 248
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G+Q+HA ++ G D+ VG+++ MY++CG L V +P +VS +
Sbjct: 249 RDVVTGRQVHAY-VVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 307
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G QN A+EYF M+ GV D
Sbjct: 308 IA-------------------------------GRTQNGDSEGALEYFCMMRSVGVAADV 336
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V IS+C+ L + + +G + V V + L+ MYS+CG + D+ R+F
Sbjct: 337 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKV--VPVMTCLVHMYSRCGCLGDSERVF 394
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
G + F S+MI + HG AI+LF M+ +P+ VTF+ +L ACSH GLK
Sbjct: 395 FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 454
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS HY C+VDLLGR+GCL+EA ++ MP+ P+G +W LL A
Sbjct: 455 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +N ++A+ A + EL+P +Y++LSNI A++ W DVS VR+ ++ ++K P
Sbjct: 515 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 574
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH+F GD +HP EI + L +++ +++ GY P++ VL+D+ DEEK
Sbjct: 575 GVSWVEL-KGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEK 633
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L+ G +R+MKNLR+C+DCHL + SQV GREIVVRD R
Sbjct: 634 EVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSR 693
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG+CSC +YW
Sbjct: 694 FHHFKDGRCSCRDYW 708
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
S LF+AC + + +Q+HA G T D + N ++ Y G L +R++F+ +
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSGAAT-DRFTANHLMLAYADLGDLTAARELFERI 164
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P R+V+SW L Y NGD+ A LF+E+P ++ W AMV G E++ +F
Sbjct: 165 PRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 224
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M+ G+ D L V CA L + V SG ++ VGS+L MY +
Sbjct: 225 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMR 282
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + + + + ++ S +++I G +G + A++ F M + VTF+
Sbjct: 283 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 342
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
+++CS H + GV C+V + R GCL ++ ++
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 393
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 319/556 (57%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + Y++ W +IRG++ G L+++ + M EG+ P T + + AC
Sbjct: 285 REVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARP 344
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G++IHA+ G SD+ GN +I MY K G
Sbjct: 345 GGLARGKEIHARAAK-DGLVSDVRFGNALINMYSKAG----------------------- 380
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F+ +P +D V+WT ++ Y + E+ F++M GV+ +
Sbjct: 381 --------SMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANK 432
Query: 186 VTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T + V+ AC+ +K W EI AE G + ++ V +AL+ MY KCGS++DA R+
Sbjct: 433 ITYMCVLKACSNPVALK---WGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRV 489
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F GM R+V +++++I G +GR A+Q + M +PN TF+ VL+AC L
Sbjct: 490 FEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLV 549
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K YG+ P+ HYACMVD+L RAG L EA ++ +P++P+ +WGALL
Sbjct: 550 EEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLA 609
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N EI + AA H +LEP G Y+ LS IYA+AGMW DV+++R+ +K G+KK
Sbjct: 610 ACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKE 669
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E G +H F A D +HP + EI L L ++++ GY P+ R V++D+ DE
Sbjct: 670 PGRSWIE-IAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEG 728
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+R + HSEKLA+A+GL++T PG +RI KNLR+C DCH S++ REI+ RD
Sbjct: 729 KERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAH 788
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G+CSCG+YW
Sbjct: 789 RFHHFKNGECSCGDYW 804
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 56/363 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ K+ W +I GY +G +++ +L+ M++E + P FT ++ AC+
Sbjct: 83 RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G++IH + ++ G +D VGN +I MY KCG + +R+VFD M RD VSWT L
Sbjct: 143 AVLNWGREIHVR-VMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 201
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AYA +G E E+++ + M V
Sbjct: 202 TGAYAESGYGE-------------------------------ESLKTYHAMLQERVRPSR 230
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T + V+SAC L ++ + I E ++V V +AL MY KCG+ DA +
Sbjct: 231 ITYMNVLSACGSLAALEKGKQIHAHIVESEYH---SDVRVSTALTKMYMKCGAFKDAREV 287
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + R+V ++++MI GF G+ A F M++ P+ T+ VL+AC+ G
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPG-- 345
Query: 305 CYGVSPSTDHYA---------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G++ + +A ++++ +AG +++A ++ ++MP + + W
Sbjct: 346 --GLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTT 402
Query: 350 LLG 352
LLG
Sbjct: 403 LLG 405
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT L Y G+ ++S+ Y +M +E + P T + AC +
Sbjct: 184 RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSL 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA I+ + SD+ V + MY+KCG +R+V
Sbjct: 244 AALEKGKQIHAH-IVESEYHSDVRVSTALTKMYMKCGAFKDAREV--------------- 287
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F L +D +AW M+ G+V + + EA F RM GV D
Sbjct: 288 ----------------FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDR 331
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+SACA+ G + + A G +++V G+ALI+MYSK GS+ DA ++F
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGL--VSDVRFGNALINMYSKAGSMKDARQVF 389
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M +R+V S+++++ +A + + F M++ K N +T++ VL ACS
Sbjct: 390 DRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALK 449
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H + G+ ++ + + G +E+A+++ E M + + W L+G
Sbjct: 450 WGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLIG 506
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 175/408 (42%), Gaps = 88/408 (21%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
+ R+G S+ L ++C + D+++G+Q+H + IL G ++Y+ NT++ +Y CG
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVH-EHILRCGVKPNVYITNTLLKLYAHCG 77
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ +R+ LF++ K V+W M++GY
Sbjct: 78 SVNEARQ-------------------------------LFDKFSNKSVVSWNVMISGYAH 106
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINN 221
+EA F MQ +E D T V ++SAC+ V+ NW EI G N+
Sbjct: 107 RGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVL---NWGREIHVRVMEAGLAND 163
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
VG+ALI MY+KCGS+ DA R+F M R+ S++++ +A G +++ + M++
Sbjct: 164 TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQ 223
Query: 282 TETKPNGVTFIGVLTACSHVG-------------------------------LKCYGVSP 310
+P+ +T++ VL+AC + +KC
Sbjct: 224 ERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKD 283
Query: 311 STDHYAC-----------MVDLLGRAGCLEEALKMVEKM---PVEPNGGVWGALLGACQ- 355
+ + + C M+ +G LEEA +M V P+ + +L AC
Sbjct: 284 AREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACAR 343
Query: 356 ---IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
+ R EI AA + + GN +I N+Y+ AG D +V
Sbjct: 344 PGGLARGKEIHARAAKDGL-VSDVRFGNALI--NMYSKAGSMKDARQV 388
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
P + ++Y R G + D V ++ +C + + V E G P NV +
Sbjct: 12 PADVLQYLHR---KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKP--NVYIT 66
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+ +Y+ CGS+++A ++F ++V S++ MI G+A G A A LF M + +
Sbjct: 67 NTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLE 126
Query: 286 PNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
P+ TF+ +L+ACS HV + G++ T ++ + + G + +A ++
Sbjct: 127 PDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRV 186
Query: 335 VEKMPVEPNGGVWGALLGA 353
+ M W L GA
Sbjct: 187 FDAMASRDEVS-WTTLTGA 204
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/565 (39%), Positives = 324/565 (57%), Gaps = 70/565 (12%)
Query: 1 MDSFPRL-----VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFT 54
+ FP L VF+Q+ + N + W LIR Y + S+ ++ M + P FT
Sbjct: 79 LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFT 138
Query: 55 LSALFKACTEVLDVSLGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
L KA +E+ ++ G+ H I LLG SD+++ N++I Y KCG LG +VF
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLG---SDVFILNSLIHFYAKCGELGLGYRVFV 195
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
P R D V+W +M+T +VQ P EA+E
Sbjct: 196 NXPRR-------------------------------DVVSWNSMITAFVQGGCPEEALEL 224
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F+ M+ V+ + +T+VGV+SACA+ ++ WV E + ++ + +A++DMY
Sbjct: 225 FQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRI--XESLTLSNAMLDMY 282
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA------------MHGRAHAAIQLFGDMV 280
+KCGS++DA R+F M ++++ S+++M++G+A MHG AI LF M
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQ 342
Query: 281 KTETKPNGVTFIGVLTACSHVGLK------------CYGVSPSTDHYACMVDLLGRAGCL 328
+ + KPN VTF +L ACSHVGL YGV P HYACMVD+LGRAG L
Sbjct: 343 EDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLL 402
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIY 388
EEA++++EKMP+ P VWGALLGAC IH N +A+ A + L ELEP G Y++LSNIY
Sbjct: 403 EEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIY 462
Query: 389 ASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDL 448
A AG WD VS +R+L++ GLKK PG S +E D G++HEF GD +HP++ +I L ++
Sbjct: 463 AKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD-GIVHEFLVGDNSHPSAKKIYAKLDEI 521
Query: 449 LDRLQADGYQPNLRSVLYDVSDEE-KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRI 507
+ RL+ GY PN +L V +E+ K++ L HSEKLA+AFGL++T +RI+KNLR+
Sbjct: 522 VARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRV 581
Query: 508 CEDCHLFMCGASQVIGREIVVRDNM 532
C DCH S++ REI++RD +
Sbjct: 582 CGDCHSVAKLVSKLYDREILLRDRV 606
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 31/255 (12%)
Query: 118 DVVSWTELIVAYANNG--DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
D S + LI A A + ++ A +F+++P + W ++ Y ++ P +++ F R
Sbjct: 66 DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125
Query: 176 MQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-GPINNVVVGS------A 227
M + + D T +I A ++L E+ G F G + V++GS +
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELE---------ELFTGKAFHGMVIKVLLGSDVFILNS 176
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI Y+KCG + YR+FV +R+V S++SMI F G A++LF +M KPN
Sbjct: 177 LIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236
Query: 288 GVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
G+T +GVL+AC+ H ++ + S M+D+ + G +E+A ++ +
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFD 296
Query: 337 KMPVEPNGGVWGALL 351
KMP E + W +L
Sbjct: 297 KMP-EKDIVSWTTML 310
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 319/543 (58%), Gaps = 18/543 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +I G+ G D++ ++ +M EG+ P ++S++ A ++ +G QIH I
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G D +V + +I MY KC VF+EM E DV + L+ + NG +++A
Sbjct: 238 K-QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296
Query: 140 GLFNELPLKD--KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
+F + D V+WT+M+ QN K EA+E F MQ GV+ + VT+ ++ AC
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGN 356
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ + + + +G N+V VGSALIDMY+KCG + + F M RN+ S++
Sbjct: 357 IAALLHGKAAHCFSLRNGI--FNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
S++ G+AMHG+ AI +F M + KP+ V+F VL+AC+ GL +
Sbjct: 415 SLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
+GV +HY+CMV LLGR+G LEEA M+++MP EP+ VWGALL +C++H ++ +I
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEI 534
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
AA +FELEP GNYI+LSNIYAS MW +V VR +++ GLKKNPGYSW+E + +
Sbjct: 535 AAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIE-IKNKV 593
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H AGD +HP +I + L L ++ GY P+ VL DV +++K++IL HSEKLA
Sbjct: 594 HMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLA 653
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+ GLL T PG ++++KNLRIC DCH + S REI VRD RFH F+ G CSCG
Sbjct: 654 VVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCG 713
Query: 546 NYW 548
+YW
Sbjct: 714 DYW 716
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 179/408 (43%), Gaps = 62/408 (15%)
Query: 32 HLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVG 91
H I ++ M +GI P S L + K C + + G+Q+H L+ G D V
Sbjct: 54 HFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFA-LVSGLGLDSVVL 112
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF---NELPLK 148
++++ MYV+ L +R VFD++P+ VV+ + LI +A G ++ LF +L ++
Sbjct: 113 SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVE 172
Query: 149 -DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
+ V+W M++G+ ++ +A+ F+ M G++ D ++ V+ A L + +
Sbjct: 173 LNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQI 232
Query: 208 CEIAEGSGFGPINNVVVGSALIDMYSKC-------------------------------G 236
G GP VV SALIDMY KC G
Sbjct: 233 HCYVIKQGLGPDKFVV--SALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNG 290
Query: 237 SIDDAYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
+D+A +F K NV S++SMI + +G+ A++LF +M KPN VT +
Sbjct: 291 LVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCL 350
Query: 295 LTACSHVGLKCYGVSPS---------TDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPN 343
L AC ++ +G + D Y + ++D+ + G + + + MP N
Sbjct: 351 LPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMP-NRN 409
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFEL------EPDKIGNYIILS 385
W +L+ +H A ++FEL +PD + +LS
Sbjct: 410 LVSWNSLMAGYAMHGK----TFEAINIFELMQRCGQKPDHVSFTCVLS 453
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 8 VFEQVKYK--NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF+Q K N WT++I G +++ L+ M+ EG+ P S T+ L AC +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ H + L G +D+YVG+ +I MY KCG + SR FD MP R++VSW L
Sbjct: 358 AALLHGKAAHCFS-LRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSL 416
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA +G K EAI FE MQ G + D+
Sbjct: 417 MAGYAMHG-------------------------------KTFEAINIFELMQRCGQKPDH 445
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ V+SAC Q G+ + W + G + S ++ + + G +++AY +
Sbjct: 446 VSFTCVLSACTQGGLTE-EGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMI 504
Query: 246 VGM 248
M
Sbjct: 505 KQM 507
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 328/558 (58%), Gaps = 22/558 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+FE ++ ++ W A+I GY G ++ + M + P FT++++ AC +
Sbjct: 251 MFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLR 310
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTE 124
+ +G+Q+H+ IL G + N +I Y K G + +R++ D+ + + +V+S+T
Sbjct: 311 MLKMGKQMHSY-ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTA 369
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GD + A +F+ + +D +AWTAM+ GY QN + EA+E F M +G E +
Sbjct: 370 LLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPN 429
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TL V+SACA L + Y + C +V V +A+I +Y++ GS+ A R
Sbjct: 430 SHTLAAVLSACASLAYLGYGKQIHCRAIRSL---QEQSVSVSNAIITVYARSGSVPLARR 486
Query: 244 IFVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + R +++SMI+ A HG AI LF +M++ KP+ VT+IGV +AC+H G
Sbjct: 487 VFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAG 546
Query: 303 ------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +G+ P HYACMVDLL RAG L EA + +++MPV P+ VWG+L
Sbjct: 547 FIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSL 606
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++ +N ++A++AA L ++PD G Y L+N+Y++ G W+D +R+ +L K +K
Sbjct: 607 LAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVK 666
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G+SW V H F A D+ HP I + ++ + ++ G+ P+L SVL+DV D
Sbjct: 667 KETGFSWTHVQSKV-HVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDD 725
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K+ +L HSEKLA+AFGL++T T+RIMKNLR+C DCH + S+V+ REI+VRD
Sbjct: 726 ELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRD 785
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 786 ATRFHHFRDGYCSCKDYW 803
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 205/439 (46%), Gaps = 47/439 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF Q+ ++ WT ++ G G D++ + M EG+ P F L+ + +C
Sbjct: 117 RVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAAT 176
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+++H+ I LG +S + V N+++ MY KCG +R VF+ M R SW +
Sbjct: 177 EARGIGRKVHSFVIKLG-LSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAM 235
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETD 184
+ Y + G M+ A +F + + V+W A++ GY QN A+++F RM A +E D
Sbjct: 236 VSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPD 295
Query: 185 YVTLVGVISACAQLGVIK---------------YANWVCE--IAEGSGFGPIN------- 220
T+ V+SACA L ++K Y++ + I+ + G +
Sbjct: 296 EFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMD 355
Query: 221 -------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
NV+ +AL++ Y K G A +F M R+V ++++MI+G+ +G+ A+
Sbjct: 356 KAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAM 415
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVDLL 322
+LF M+++ +PN T VL+AC+ + YG S ++ +
Sbjct: 416 ELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVY 475
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGN 380
R+G + A ++ +++ W +++ A H E A + + ++PD++
Sbjct: 476 ARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRV-T 534
Query: 381 YIILSNIYASAGMWDDVSR 399
YI + + AG D R
Sbjct: 535 YIGVFSACTHAGFIDKGKR 553
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 152/330 (46%), Gaps = 48/330 (14%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF-LGC---SRKVFDE 113
L + ++ S G+ IHA + G S Y+ N ++ Y + G GC +R++FD+
Sbjct: 31 LLQLSQTAVNPSAGRAIHAHAVKAGLLVS-AYLCNNLLSYYARAGVGRGCFHEARRLFDD 89
Query: 114 MP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
+P R+ +W L+ YA +G + A +F ++P +D V+WT MV G + + +A++
Sbjct: 90 IPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVK 149
Query: 172 YFERMQYAGVETDYVTLVGVISACA----------------QLGV---IKYANWVCEIAE 212
F M G+ L V+S+CA +LG+ + AN V +
Sbjct: 150 TFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYG 209
Query: 213 GSGFGPINNVVVG----------SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
G V +A++ +Y+ G +D A +F M++R++ S++++I G
Sbjct: 210 KCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAG 269
Query: 263 FAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACS-----------HVGLKCYGVSP 310
+ +G A++ F M+ + +P+ T VL+AC+ H + G+
Sbjct: 270 YNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY 329
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPV 340
S+ ++ ++G +E A ++++K V
Sbjct: 330 SSQIMNALISTYAKSGSVETARRIMDKAVV 359
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 36/245 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WTA+I GY G +++ L+ SM R G P S TL+A+ AC +
Sbjct: 384 REVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASL 443
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
+ G+QIH + I S + V N +I +Y + G + +R+VFD++ R + V+WT
Sbjct: 444 AYLGYGKQIHCRAIRSLQEQS-VSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTS 502
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+IVA A +G E +AI FE M GV+ D
Sbjct: 503 MIVALAQHGLGE-------------------------------QAIVLFEEMLRVGVKPD 531
Query: 185 YVTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT +GV SAC G I K + ++ G P + + ++D+ ++ G + +A+
Sbjct: 532 RVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVP--EMSHYACMVDLLARAGLLTEAHE 589
Query: 244 IFVGM 248
M
Sbjct: 590 FIQRM 594
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N ++L+ MY+K G + DA +F M +R+ S++ M++G GR A++ F DMV
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 281 KTETKPNGVTFIGVLTACSH-----VGLKCY------GVSPSTDHYACMVDLLGRAGCLE 329
P+ VL++C+ +G K + G+S ++ + G+ G E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215
Query: 330 EALKMVEKMPVEPNGGVWGALLG 352
A + E+M V W A++
Sbjct: 216 TARAVFERMKVRSESS-WNAMVS 237
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 327/560 (58%), Gaps = 46/560 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F Q++ +PF+ +IRGY + +++SLY M G+ ++T + AC
Sbjct: 62 NYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAAC 121
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ V LG++ H + +L GF SDL+V N +I Y CG GC+ VFDE RDVV+W
Sbjct: 122 ARLGAVKLGRRFHCE-VLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTW 180
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I A+ N G E A L +E+ D N +P
Sbjct: 181 NIMINAHLNKGLSEKAFDLLDEMTKLD-------------NLRP---------------- 211
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDA 241
D VT+V ++ ACAQLG ++ ++ ++ IN ++V+ +AL+DMY+KCGSID A
Sbjct: 212 -DEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLA 270
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M+ RNVF+++++I G AMHG AI LF M + P+ VTFI +L ACSH
Sbjct: 271 LQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHA 330
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + + P +HY C+VDLL RA +++AL +E MP++ N +W
Sbjct: 331 GLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWAT 390
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC+ + ++A+ + ELEPD G Y++LSN+YA WD ++R+ +K G+
Sbjct: 391 LLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGI 450
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDV 468
+K PG SW+E + G+IH+F AGD +H + +I + ++ R+ D G+ P +VL+D+
Sbjct: 451 EKTPGCSWIELN-GMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDI 509
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK+ L HSEKLA+A GL++T G+ +RI+KNLR+C DCH F+ S+V REIV
Sbjct: 510 EEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVA 569
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSC ++W
Sbjct: 570 RDRSRFHHFKEGSCSCMDFW 589
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 23/289 (7%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+A +++GD+ A LF ++ D M+ GY ++ P EA+ + M GV D
Sbjct: 52 FLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDN 111
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V++ACA+LG +K + CE+ + +GFG +++ V +ALI Y CGS A +
Sbjct: 112 YTYPFVLAACARLGAVKLGRRFHCEVLK-NGFG--SDLFVINALIQFYHNCGSFGCACDV 168
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVG- 302
F R+V +++ MI G + A L +M K + +P+ VT + ++ AC+ +G
Sbjct: 169 FDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGN 228
Query: 303 ------LKCYGVSPSTDHYAC-------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L Y C +VD+ + G ++ AL++ +M V N W A
Sbjct: 229 LERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNA 287
Query: 350 LLGACQIHRNPEIAQIAANHLF--ELEPDKIGNYIILSNIYASAGMWDD 396
L+G +H + E A + + +L PD + +I L + AG+ D+
Sbjct: 288 LIGGLAMHGHGEDAISLFDQMEHDKLMPDDV-TFIALLCACSHAGLVDE 335
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 309/538 (57%), Gaps = 45/538 (8%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
+IR + G D + Y M R + P + S + ++C + LG+ H Q I+
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQ-IMKM 59
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF D+ + ++ Y K G++ +R +FD M ER+
Sbjct: 60 GFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERN------------------------ 95
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+ V W M++ YVQ + AI F++MQ V+ VT+V ++SACA LG +
Sbjct: 96 -----SNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALD 150
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
W+ +VV+G+ALIDMY KCG+++ A +F G+ ++N+F ++S+I+G
Sbjct: 151 MGEWIHGYIRTKRLKI--DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVG 208
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSP 310
M+GR AI F M K KP+GVTF+G+L+ CSH GL YG+ P
Sbjct: 209 LGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEP 268
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
+HY CMVDLLGRAG L+EAL+++ MP++PN V G+LL ACQIH++ ++ + L
Sbjct: 269 GVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQL 328
Query: 371 FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA 430
EL+P GNY+ LSN+YAS WDDV+ R+L+ G+ K PG S +E + ++HEF A
Sbjct: 329 LELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNN-IVHEFVA 387
Query: 431 GDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGL 490
GD +HP T+I L ++ L+ G+ PN +VL+D+ +EEK+ + HSE++A+AFGL
Sbjct: 388 GDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGL 447
Query: 491 LTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++T PG T+R++KNLR C DCH M S REI+VRD RFHHF++G CSC +YW
Sbjct: 448 MSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 39/251 (15%)
Query: 13 KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQ 72
+ N W +I Y+ G +IS++ M+ E + P T+ +L AC + + +G+
Sbjct: 94 RNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE 153
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
IH I D+ +GN +I MY KCG L + VF + +++ W +IV N
Sbjct: 154 WIHGY-IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMN 212
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G + EAI F M+ G++ D VT VG++
Sbjct: 213 G-------------------------------RGEEAIAAFIVMEKEGIKPDGVTFVGIL 241
Query: 193 SACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
S C+ G++ + E+ G P V ++D+ + G + +A + M +
Sbjct: 242 SGCSHSGLLSAGQRYFSEMLGVYGLEP--GVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
Query: 252 NVFSYSSMILG 262
+SM+LG
Sbjct: 300 P----NSMVLG 306
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + KN F W ++I G + G +++I+ + M +EGI P T + C+
Sbjct: 190 VFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 249
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+S GQ+ ++ + + G + M+ + + G+L + ++ MP
Sbjct: 250 LSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMP 297
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 326/562 (58%), Gaps = 52/562 (9%)
Query: 4 FPRLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSM---RREGIGPVSFTLSALF 59
+ R +F+ + KN W+A++ Y++ +++++ L+C + + + I + TL+ +
Sbjct: 273 YARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVI 332
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
+ C + D+S G +H I GF DL VGNT++ MY KCG +
Sbjct: 333 RVCANLTDLSTGTCLHCYAIK-SGFVLDLMVGNTLLSMYAKCGII--------------- 376
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
NG M FNE+ L+D V++TA+++GYVQN E + F MQ +
Sbjct: 377 ------------NGAMR----FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLS 420
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G+ + TL V+ ACA L + Y + C G + ++ +ALIDMY+KCG ID
Sbjct: 421 GINPEKATLASVLPACAHLAGLHYGS--CSHCYAIICGFTADTMICNALIDMYAKCGKID 478
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A ++F M +R + S+++MI+ + +HG A+ LF +M KP+ VTFI +++ACS
Sbjct: 479 TARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACS 538
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + +G+ P +HYACMVDLL RAG +E +EKMP+EP+ VW
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC++++N E+ + + + +L P+ GN+++LSN+Y++ G WDD ++VR K
Sbjct: 599 GALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQ 658
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDL-THPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G +K+PG SW+E GV+H F G +HP T+I L +LL ++ GYQ V
Sbjct: 659 GFEKSPGCSWIEIS-GVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQ 717
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +EEK+R+L+ HSEKLA+AFG+L+ SP + + KNLR+C DCH + S V R+I
Sbjct: 718 DVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDI 777
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG C+CG++W
Sbjct: 778 TVRDASRFHHFKDGICNCGDFW 799
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 150/317 (47%), Gaps = 49/317 (15%)
Query: 6 RLVFEQVKY--KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+++ + KN LW LIR Y G +++I LY M GI P FT + KAC+
Sbjct: 71 RHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACS 130
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + S G++IH L S++YV ++ Y KCG L +++VFD+M +RDVV
Sbjct: 131 ALKEASEGREIHCDIKRL-RLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVV--- 186
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY-VQNAKPREAIEYFERMQYAGVE 182
AW +M++G+ + E +MQ V
Sbjct: 187 ----------------------------AWNSMISGFSLHEGSYDEVARLLVQMQ-NDVS 217
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T+VGV+ A AQ+ +++ + GF + +VVVG+ ++D+Y KC ID A
Sbjct: 218 PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF--VGDVVVGTGILDVYGKCQCIDYAR 275
Query: 243 RIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP---NGVTFIGVLTAC 298
RIF M +N ++S+M+ + + A++LF ++ + + VT V+ C
Sbjct: 276 RIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVC 335
Query: 299 SHVG-------LKCYGV 308
+++ L CY +
Sbjct: 336 ANLTDLSTGTCLHCYAI 352
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 56/319 (17%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN------TMIGMYVKCGFLGCSRK 109
+ L ++C + + G+ IH + T + + N ++ +Y+ C L +R
Sbjct: 13 TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD+MP R K+ V W ++ Y N EA
Sbjct: 73 VFDKMPHRP-----------------------------KNVVLWNLLIRAYAWNGPYEEA 103
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSAL 228
I+ + +M G+ + T V+ AC+ L + C+I +NV V +AL
Sbjct: 104 IDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKR---LRLESNVYVSTAL 160
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+D Y+KCG +DDA +F M +R+V +++SMI GF++H ++ + ++ + PN
Sbjct: 161 VDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNS 220
Query: 289 VTFIGVLTACSHVGLKCYGVSPSTDHYAC--------------MVDLLGRAGCLEEALKM 334
T +GVL A + V +G H C ++D+ G+ C++ A ++
Sbjct: 221 STIVGVLPAVAQVNSLRHG---KEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRI 277
Query: 335 VEKMPVEPNGGVWGALLGA 353
+ M + N W A++GA
Sbjct: 278 FDMMGIVKNEVTWSAMVGA 296
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/498 (42%), Positives = 302/498 (60%), Gaps = 16/498 (3%)
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T+V L +HA G +D +V + + MY G +G R F E+ DVV
Sbjct: 135 TDVAVNLLAGSVHAAA-FQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCV 193
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T ++ A + GD+++A LF+ +P +D VAW AM+TGYV+ + REA+ F+ MQ AGV
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVA 253
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VTLV V++ACAQ+G ++ WV G +V +G+AL+DMYSKCG + +
Sbjct: 254 VSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRV--SVTLGTALVDMYSKCGVVTMSM 311
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M++RN+++++S + G AM+G ++LF M +PNGVTF+ VL CS G
Sbjct: 312 EVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAG 371
Query: 303 L-----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L C+ V P +HY CMVDL GRAG L++A+ + MPVEP+ GVWGAL
Sbjct: 372 LVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGAL 431
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L A +IH N ++ + A + L E+E +++LSNIYA + W VS+VR ++K G+K
Sbjct: 432 LNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVK 491
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S +E D G +HEF G +HP +IQ L ++ RL+ GY N + VL+D+ +
Sbjct: 492 KMPGCSAIEVD-GKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEE 550
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ + HSEKLALAFGL+T +RI+KNLR+C+DCH + S+V REIV+RD
Sbjct: 551 EEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVMRD 610
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+ G CSC +YW
Sbjct: 611 RNRFHHFKHGACSCRDYW 628
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A++ GY+ G ++++ L+ M++ G+ TL ++ AC ++
Sbjct: 210 RELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQM 269
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G +H+ + G + +G ++ MY KCG + S +VF+ M ER++ +WT
Sbjct: 270 GALERGMWVHSY-VCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSA 328
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A NG E E +E F+RM+ AG+E +
Sbjct: 329 LSGLAMNGMGE-------------------------------ECLELFKRMESAGMEPNG 357
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT V V+ C+ G+++ C + + ++D+Y + G +DDA
Sbjct: 358 VTFVAVLRGCSVAGLVEEGR-ACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDA 412
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 324/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N W ++I Y+ + K+++ ++ M EG+ P ++ AC ++
Sbjct: 291 RQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH ++ LG ++ V N++I MY KC
Sbjct: 351 GDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCK----------------------- 386
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++++A +F +L + V+W AM+ G+ QN +P +A+ YF +M+ V+ D
Sbjct: 387 --------EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V VI+A A+L + +A W+ + S NV V +AL+DMY+KCG+I A IF
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLD--KNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH----- 300
M +R+V ++++MI G+ HG AA++LF +M K KPNGVTF+ V++ACSH
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 301 VGLKC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
GLKC Y + S DHY MVDLLGRAG L EA + +MPV+P V+GA+LGA
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
CQIH+N A+ AA LFEL PD G +++L+NIY +A MW+ V +VR + GL+K P
Sbjct: 617 CQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + +H F +G HP+S +I L L+ ++ GY P+ VL V ++ K
Sbjct: 677 GCSMVE-IKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVK 734
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L THSEKLA++FGLL T+ G T+ + KNLR+C DCH S V GREIVVRD R
Sbjct: 735 EQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQR 794
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 795 FHHFKNGACSCGDYW 809
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 147/295 (49%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K L+ +++G+ L ++ + MR + + PV + + L K C + +
Sbjct: 91 VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 150
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G++IH ++ GF+ DL+ + MY KC + +RKVFD
Sbjct: 151 LRVGKEIHG-LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR-------------- 195
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+P +D V+W +V GY QN R A+E + M ++ ++T
Sbjct: 196 -----------------MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ A + L +I + A SGF + N+ +AL+DMY+KCGS++ A ++F G
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI--STALVDMYAKCGSLETARQLFDG 296
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M +RNV S++SMI + + A+ +F M+ KP V+ +G L AC+ +G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 181/394 (45%), Gaps = 79/394 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W ++ GY G + ++ + SM E + P T+ ++ A + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S+G++IH + GF S + + ++ MY KCG
Sbjct: 250 RLISVGKEIHGYA-MRSGFDSLVNISTALVDMYAKCG----------------------- 285
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+E+A LF+ + ++ V+W +M+ YVQN P+EA+ F++M GV+
Sbjct: 286 --------SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+++G + ACA LG ++ ++ +++ G NV V ++LI MY KC +D A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLD--RNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++ R + S+++MILGFA +GR A+ F M KP+ T++ V+TA + + +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 304 ----------------KCYGVSPSTDHYA------------------------CMVDLLG 323
+ + D YA M+D G
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 324 RAGCLEEALKMVEKM---PVEPNGGVWGALLGAC 354
G + AL++ E+M ++PNG + +++ AC
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 149/306 (48%), Gaps = 23/306 (7%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ + G ++ A +F + K V + M+ G+ + + +A+++F RM+Y VE
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ C ++ + + SGF ++ + L +MY+KC +++A
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL--DLFAMTGLENMYAKCRQVNEAR 190
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +R++ S+++++ G++ +G A A+++ M + KP+ +T + VL A S
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS--A 248
Query: 303 LKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L+ V YA +VD+ + G LE A ++ + M +E N W +
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNS 307
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT-- 407
++ A + NP+ A + + + E K + ++ ++A A + D+ R R + K++
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADL-GDLERGRFIHKLSVE 365
Query: 408 -GLKKN 412
GL +N
Sbjct: 366 LGLDRN 371
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 340/619 (54%), Gaps = 80/619 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K +WT LI Y+ ++++ L+ +G P +T+S++ ACTE+
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTEL 267
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF---LGCSRKVFDEMPERDVVSW 122
V LG Q+H+ + +G SD V ++ MY K + + KVF+ MP+ DV+SW
Sbjct: 268 GSVRLGLQLHSLALRMG-LASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISW 326
Query: 123 TELIVAYANNGDMESA-----GGLFNELPLKDKVAWT----------------------- 154
T LI Y +G E+ G + NE + + ++
Sbjct: 327 TALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVI 386
Query: 155 ------------AMVTGYVQNAKPREAIEYF---------------------ERMQYAGV 181
A+V+ Y ++ EA F R+ V
Sbjct: 387 KSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDV 446
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T +ISA A +G++ + ++ +GFG ++ V ++L+ MYS+CG ++DA
Sbjct: 447 GISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFG--SDRFVSNSLVSMYSRCGYLEDA 504
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R F +K RNV S++SMI G A HG A A+ LF DM+ T KPN VT+I VL+ACSHV
Sbjct: 505 CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + +G+ P +HYACMVDLL R+G ++EAL+ + +MP++ + VW
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKT 624
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC+ H N E+ +I A ++ ELEP Y++LSN+YA AG+WD+V+R+R ++ L
Sbjct: 625 LLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K G SW+E + HEFRAGD +HP + +I L L+ +++ GY P+ VL+D+S
Sbjct: 685 NKETGLSWMEVE-NTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMS 743
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
DE K++ L+ HSEK+A+AFGL+TTS +RI KNLR+C DCH + S+ REI++R
Sbjct: 744 DELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILR 803
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D+ RFH +DG+CSCG YW
Sbjct: 804 DSNRFHRMKDGECSCGEYW 822
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 54/352 (15%)
Query: 6 RLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+ ++ ++ WTA+ G + S+ L M G+ P ++TL A AC
Sbjct: 104 RNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC-- 161
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYV--KCGFLGCSRKVFDEMPERDVVSW 122
F +LY + + + K G G DV
Sbjct: 162 -------------------FPHELYCLVGGVVLGLVHKMGLWGT-----------DVAVG 191
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ LI A NGD+ SA +F+ L K V WT +++ YVQ EA+E F G E
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFE 251
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG---SID 239
D T+ +ISAC +LG ++ + +A G ++ V L+DMY+K ++D
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGLA--SDACVSCGLVDMYAKSNIGQAMD 309
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M + +V S++++I G+ G + + + LFG+M+ KPN +T+ +L +C
Sbjct: 310 YANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSC 369
Query: 299 SHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+ + +K S T A +V + +GC+EEA ++ ++
Sbjct: 370 ASISDHDSGRQVHAHVIKSNQASAHTVGNA-LVSMYAESGCMEEARRVFNQL 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 50/290 (17%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTEL 125
D+ LG+ +H + + D V N+++ +Y +CG + +R VFD M RD+VSW
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSW--- 119
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
TAM + +N R ++ M +G+ +
Sbjct: 120 ----------------------------TAMASCLARNGAERGSLLLIGEMLESGLLPNA 151
Query: 186 VTLVGVISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TL AC +L + + + + +G +V VGSALIDM ++ G + A +
Sbjct: 152 YTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWG--TDVAVGSALIDMLARNGDLASARK 209
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F G+ ++ V ++ +I + A A++LF D ++ +P+ T +++AC+ +G
Sbjct: 210 VFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGS 269
Query: 303 ------LKCYGVSPSTDHYAC----MVDLLGRAG---CLEEALKMVEKMP 339
L + AC +VD+ ++ ++ A K+ E+MP
Sbjct: 270 VRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP 319
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 320/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFEQ+ N WTA+I Y+ G K++I L+C M I P F+ S++ KAC
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+Q+++ + LG S VGN++I MY
Sbjct: 349 LSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMY-------------------------- 381
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ME A F+ L K+ V++ A+V GY +N K EA F + G+
Sbjct: 382 -----ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G + + G+ +N + +ALI MYS+CG+I+ A+++
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAFQV 494
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++SMI GFA HG A A+++F M++T TKPN +T++ VL+ACSHVG+
Sbjct: 495 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 554
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P +HYACMVDLLGR+G L EA++ + MP+ + VW LLG
Sbjct: 555 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 614
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EPD YI+LSN++ASAG W DV ++R+ +K L K
Sbjct: 615 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 674
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H F G+ +HP + +I Q L L +++ GY P+ VL+D+ +E+
Sbjct: 675 AGCSWIEVENRV-HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 733
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HSEK+A+AFGL++TS +RI KNLR+C DCH + S GREIVVRD+
Sbjct: 734 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 793
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH ++G CSC +YW
Sbjct: 794 RFHHIKNGVCSCNDYW 809
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 36/298 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I + G +D+I L+ M G P FT S++ ACTE+
Sbjct: 187 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
++LG+Q+H++ I L G D+ VG +++ MY KC G + SRKVF++MPE +V+SWT
Sbjct: 247 LALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I AY +G+ + +EAIE F +M + +
Sbjct: 306 IITAYVQSGECD------------------------------KEAIELFCKMISGHIRPN 335
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+ AC L V A G +N VG++LI MY++ G ++DA +
Sbjct: 336 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKA 393
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + ++N+ SY++++ G+A + ++ A LF ++ T + TF +L+ + +G
Sbjct: 394 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 166/363 (45%), Gaps = 52/363 (14%)
Query: 6 RLVFEQVKYKNPFL-WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
RL+FE + K + W+A++ + +I + M G P + +A+ +AC+
Sbjct: 81 RLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSN 140
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+G+ I+ + G +D+ VG +I M+VK
Sbjct: 141 ANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK------------------------ 176
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+GD+ SA +F+++P ++ V WT M+T + Q R+AI+ F M+ +G D
Sbjct: 177 ------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPD 230
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDDA 241
T V+SAC +LG++ + G +V VG +L+DMY+KC GS+DD+
Sbjct: 231 RFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL--DVCVGCSLVDMYAKCAADGSVDDS 288
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F M + NV S++++I + G AI+LF M+ +PN +F VL AC +
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Query: 301 VG-------LKCYGVSPSTDHYAC----MVDLLGRAGCLEEALK----MVEKMPVEPNGG 345
+ + Y V C ++ + R+G +E+A K + EK V N
Sbjct: 349 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 408
Query: 346 VWG 348
V G
Sbjct: 409 VDG 411
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 154/348 (44%), Gaps = 68/348 (19%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G L + S M ++ P T S L K+C + LG+ +H + ++ G D V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVH-RKLMQSGLELDSVV 63
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
NT+I +Y KCG +R +F+ M +RD+VSW+ ++ +ANN
Sbjct: 64 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS---------------- 107
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
+ W A+ T F M G + VI AC+ YA WV E
Sbjct: 108 -MEWQAIWT--------------FLDMLELGFYPNEYCFAAVIRACSN---ANYA-WVGE 148
Query: 210 IAEG----SGFGPINNVVVGSALIDMYSK-CGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
I G +G+ +V VG LIDM+ K G + AY++F M +RN+ +++ MI FA
Sbjct: 149 IIYGFVVKTGYLEA-DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 207
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------------------KC 305
G A AI LF DM + P+ T+ VL+AC+ +GL C
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G S + C D G ++++ K+ E+MP E N W A++ A
Sbjct: 268 VGCSLVDMYAKCAAD-----GSVDDSRKVFEQMP-EHNVMSWTAIITA 309
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 320/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFEQ+ N WTA+I Y+ G K++I L+C M I P F+ S++ KAC
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+Q+++ + LG S VGN++I MY
Sbjct: 367 LSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMY-------------------------- 399
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ME A F+ L K+ V++ A+V GY +N K EA F + G+
Sbjct: 400 -----ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G + + G+ +N + +ALI MYS+CG+I+ A+++
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAFQV 512
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++SMI GFA HG A A+++F M++T TKPN +T++ VL+ACSHVG+
Sbjct: 513 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 572
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P +HYACMVDLLGR+G L EA++ + MP+ + VW LLG
Sbjct: 573 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 632
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EPD YI+LSN++ASAG W DV ++R+ +K L K
Sbjct: 633 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 692
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H F G+ +HP + +I Q L L +++ GY P+ VL+D+ +E+
Sbjct: 693 AGCSWIEVENRV-HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 751
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HSEK+A+AFGL++TS +RI KNLR+C DCH + S GREIVVRD+
Sbjct: 752 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 811
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH ++G CSC +YW
Sbjct: 812 RFHHIKNGVCSCNDYW 827
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 36/298 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I + G +D+I L+ M G P FT S++ ACTE+
Sbjct: 205 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
++LG+Q+H++ I L G D+ VG +++ MY KC G + SRKVF++MPE +V+SWT
Sbjct: 265 LALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 323
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I AY +G+ + +EAIE F +M + +
Sbjct: 324 IITAYVQSGECD------------------------------KEAIELFCKMISGHIRPN 353
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+ AC L V A G +N VG++LI MY++ G ++DA +
Sbjct: 354 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKA 411
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + ++N+ SY++++ G+A + ++ A LF ++ T + TF +L+ + +G
Sbjct: 412 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 166/363 (45%), Gaps = 52/363 (14%)
Query: 6 RLVFEQVKYKNPFL-WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
RL+FE + K + W+A++ + +I + M G P + +A+ +AC+
Sbjct: 99 RLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSN 158
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+G+ I+ + G +D+ VG +I M+VK
Sbjct: 159 ANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK------------------------ 194
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+GD+ SA +F+++P ++ V WT M+T + Q R+AI+ F M+ +G D
Sbjct: 195 ------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPD 248
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDDA 241
T V+SAC +LG++ + G +V VG +L+DMY+KC GS+DD+
Sbjct: 249 RFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL--DVCVGCSLVDMYAKCAADGSVDDS 306
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F M + NV S++++I + G AI+LF M+ +PN +F VL AC +
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Query: 301 VG-------LKCYGVSPSTDHYAC----MVDLLGRAGCLEEALK----MVEKMPVEPNGG 345
+ + Y V C ++ + R+G +E+A K + EK V N
Sbjct: 367 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 426
Query: 346 VWG 348
V G
Sbjct: 427 VDG 429
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 154/348 (44%), Gaps = 68/348 (19%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G L + S M ++ P T S L K+C + LG+ +H + ++ G D V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVH-RKLMQSGLELDSVV 81
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
NT+I +Y KCG +R +F+ M +RD+VSW+ ++ +ANN
Sbjct: 82 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS---------------- 125
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
+ W A+ T F M G + VI AC+ YA WV E
Sbjct: 126 -MEWQAIWT--------------FLDMLELGFYPNEYCFAAVIRACSN---ANYA-WVGE 166
Query: 210 IAEG----SGFGPINNVVVGSALIDMYSK-CGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
I G +G+ +V VG LIDM+ K G + AY++F M +RN+ +++ MI FA
Sbjct: 167 IIYGFVVKTGYLEA-DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 225
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------------------KC 305
G A AI LF DM + P+ T+ VL+AC+ +GL C
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G S + C D G ++++ K+ E+MP E N W A++ A
Sbjct: 286 VGCSLVDMYAKCAAD-----GSVDDSRKVFEQMP-EHNVMSWTAIITA 327
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 325/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+ + +N W ++I Y+ + K+++ ++ M EG+ P ++ AC ++
Sbjct: 291 RLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH ++ L ++ V N++I MY KC
Sbjct: 351 GDLERGRFIHKLSVELE-LDRNVSVVNSLISMYCKCK----------------------- 386
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++++A +F +L + V+W AM+ G+ QN +P EA+ YF +MQ V+ D
Sbjct: 387 --------EVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDT 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V VI+A A+L + +A W+ + + NV V +AL+DMY+KCG+I A IF
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRNCLD--KNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH----- 300
M +R+V ++++MI G+ HG AA++LF +M K +PNGVTF+ V++ACSH
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVE 556
Query: 301 VGLKC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
GLKC Y + PS DHY MVDLLGRAG L EA + +MPV+P V+GA+LGA
Sbjct: 557 AGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
CQIH+N A+ A LFEL P+ G +++L+NIY +A MW+ V +VR + GL+K P
Sbjct: 617 CQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + +H F +G HP+S +I L L+ +++ GY P+ +L + D+ K
Sbjct: 677 GCSMVE-IKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVK 734
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L +HSEKLA++FGLL T+ G T+ + KNLR+C DCH S V GREI+VRD R
Sbjct: 735 EQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQR 794
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 795 FHHFKNGACSCGDYW 809
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 195/443 (44%), Gaps = 86/443 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W ++ GY G + ++ + M E + P T+ ++ A + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSAL 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IH + GF S + + ++ MY KCG L +R +FD M ER+VVSW +
Sbjct: 250 RLIRIGKEIHGYA-MRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSM 308
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A YVQN P+EA+ F++M GV+
Sbjct: 309 IDA-------------------------------YVQNENPKEAMVIFQKMLDEGVKPTD 337
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+++G + ACA LG ++ ++ +++ NV V ++LI MY KC +D A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELELD--RNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++ R + S+++MILGFA +GR A+ F M KP+ T++ V+TA + + +
Sbjct: 396 GKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITH 455
Query: 304 ----------------KCYGVSPSTDHYA------------------------CMVDLLG 323
+ + D YA M+D G
Sbjct: 456 HAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 324 RAGCLEEALKMVEKM---PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
G + AL++ E+M + PNG + +++ AC H A + H+ + N
Sbjct: 516 THGIGKAALELFEEMQKGTIRPNGVTFLSVISACS-HSGLVEAGLKCFHMMK------EN 568
Query: 381 YIILSNIYASAGMWDDVSRVRRL 403
Y I ++ M D + R RL
Sbjct: 569 YSIEPSMDHYGAMVDLLGRAGRL 591
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K L+ +++G+ L ++ + MR + + PV + + L K C + +
Sbjct: 91 VFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAE 150
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G++IH ++ GF+ DL+ + MY KC + +RKVFD
Sbjct: 151 LRVGKEIHG-LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDR-------------- 195
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+P +D V+W +V GY QN R A+E M ++ ++T
Sbjct: 196 -----------------MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ A + L +I+ + A +GF + N+ +AL+DMY+KCGS+ A +F G
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI--ATALVDMYAKCGSLKTARLLFDG 296
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M +RNV S++SMI + + A+ +F M+ KP V+ +G L AC+ +G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLG 351
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 142/298 (47%), Gaps = 20/298 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ + G ++ A +F + K V + M+ G+ + + +A+++F RM+ VE
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ C ++ + + SGF ++ + L +MY+KC + +A
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL--DLFAMTGLENMYAKCRQVHEAR 190
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +R++ S+++++ G++ +G A A+++ M + KP+ +T + VL A S
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVS--A 248
Query: 303 LKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L+ + YA +VD+ + G L+ A + + M +E N W +
Sbjct: 249 LRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM-LERNVVSWNS 307
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
++ A + NP+ A + + + E K + ++ ++A A + D+ R R + K++
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLD-EGVKPTDVSVMGALHACADL-GDLERGRFIHKLS 363
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 329/585 (56%), Gaps = 56/585 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N FL ++R Y G ++I LY M+R G+G +FT + K C L G+ +H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN--- 132
Q ++ GF SDL+V ++ MY KCG +G + +VFD M RDVV WT +I Y
Sbjct: 156 GQ-VVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214
Query: 133 ----------------GD------MESAGG--------------LFNELPLKDKVAWTAM 156
GD + SA G +F+ + ++ ++W +M
Sbjct: 215 LKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSM 274
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
++GY QN +P +A+ F +MQ + + + VT + ++SAC+ LG + S
Sbjct: 275 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 334
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+ + +A++DMY KCG +D A +F + +R+V S++ +I G+ +HG A++
Sbjct: 335 DI--DTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 392
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCYG------VSPSTDHYACMVDLLG 323
LF M +PN +TF +L+ACSH GL KC+ V P HYACMVD+LG
Sbjct: 393 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLG 452
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
RAG L EA ++++K+P P+ VWGALL AC+IH N E+ +IAAN+LF+LEP+ G Y++
Sbjct: 453 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVL 512
Query: 384 LSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQ 443
+SNIYA++ W +V VR+ +K GLKK +S +E V H F D + P E+ +
Sbjct: 513 MSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEV-HGFHTADQSSPYYREVYR 571
Query: 444 ALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMK 503
+ L ++ GY P+L VL+DV E+K+ +L HSEKLA+AFG++ G +++ K
Sbjct: 572 KVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTK 631
Query: 504 NLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
NLR+C DCH S + GR+I+VRD RFHHFQ G+CSCG+YW
Sbjct: 632 NLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S RLVF++++ +N W +++ GY G D++SL+ M+ P T + AC
Sbjct: 254 SRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSAC 313
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVV 120
+ + LG+++H ++ D + N ++ MY+KCG L + ++F+ E+ ERDV
Sbjct: 314 SYLGSKHLGRKLH-NFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVS 372
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW LI +GY + +EA+E F RMQ G
Sbjct: 373 SWNVLI-------------------------------SGYGVHGHGKEALELFSRMQVEG 401
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
VE + +T ++SAC+ G+I A+ + + + ++DM + G +++
Sbjct: 402 VEPNDITFTSILSACSHAGLIDEGRKC--FADMTKLSVRPEMKHYACMVDMLGRAGFLNE 459
Query: 241 AYRIFVGMKQRNVFS-YSSMILGFAMHG 267
A+R+ + R + +++L +HG
Sbjct: 460 AFRLIKKIPSRPSDEVWGALLLACRIHG 487
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTA--------MVTGYVQNAKPREAIEYFERM 176
LI+ Y+ GD+ SA LF+ A M+ Y + EAI+ + M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 177 QYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
Q GV + T V+ CA +LG + + V +GFG +++ V +AL+DMY+KC
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVRTGFG--SDLFVEAALVDMYAKC 180
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G I DA+ +F M R+V +++MI + R A+ LF M + + +T I V
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVA 240
Query: 296 TACSHVG 302
+A +G
Sbjct: 241 SAVGQLG 247
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 323/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKA 61
SF +F Q++ N F W +IRG+ + ++ L+ M I P + T LFKA
Sbjct: 86 SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+++DVSLG+ IH+ ++ GF S +V N+++ MY G L + +VF+
Sbjct: 146 VAKLMDVSLGEGIHS-VVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFE--------- 195
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
I++Y +D+VAW +++ G+ N P EA+ + M GV
Sbjct: 196 ----IMSY------------------RDRVAWNSVINGFALNGMPNEALTLYREMGSEGV 233
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E D T+V ++SAC +LG + V G + N +AL+D+YSKCG+ DA
Sbjct: 234 EPDGFTMVSLLSACVELGALALGERVHMYMVKVGL--VQNQHASNALLDLYSKCGNFRDA 291
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R+V S++S+I+G A++G + A++LFG++ + KP+ +TF+GVL ACSH
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G+ + YG+ P +H+ CMVDLL RAG + +A + MPV PN +W
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC IH + E+ ++A + LE G++++LSN+YAS W DV VR+++ M G+
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PGYS +E + ++EF GD +HP S E L + L+ +GY P +VL D+
Sbjct: 472 KKTPGYSLVEL-KNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIE 530
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L H+EK+A+AF L+ T PG +RIMKNLR+C DCHL + S+V REI+VR
Sbjct: 531 EEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVR 590
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +YW
Sbjct: 591 DRSRFHHFKDGSCSCKDYW 609
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 15/232 (6%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVG 190
+ M A +FN++ + W M+ G+ ++ P A+E F +M A + D T
Sbjct: 82 SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF 141
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
+ A A+L + + + +GF + V ++L+ MYS GS+ AY++F M
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLR--FVQNSLVHMYSVLGSLXSAYQVFEIMSY 199
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--- 307
R+ +++S+I GFA++G + A+ L+ +M +P+G T + +L+AC +G G
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259
Query: 308 ------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
V + +A ++DL + G +A K+ ++M E + W +L+
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTSLI 310
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 330/555 (59%), Gaps = 30/555 (5%)
Query: 18 FLWTALIRGYI-----LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQ 72
FLW +IR + Q H IS+Y MR + P T L + L + LGQ
Sbjct: 25 FLWNIIIRAIVHNVSSPQRH--SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
+ HAQ ILL G D +V +++ MY CG L +++VFD+ +D+ +W ++ AYA
Sbjct: 83 RTHAQ-ILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-----AGVETDYVT 187
G ++ A LF+E+P ++ ++W+ ++ GYV K +EA++ F MQ A V + T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+SAC +LG ++ WV A + ++V+G+ALIDMY+KCGS++ A R+F
Sbjct: 202 MSTVLSACGRLGALEQGKWVH--AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 248 M-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGL-- 303
+ +++V +YS+MI AM+G QLF +M ++ PN VTF+G+L AC H GL
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G++PS HY CMVDL GR+G ++EA + MP+EP+ +WG+LL
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++ + + + A L EL+P G Y++LSN+YA G W +V +R +++ G+ K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S++E + GV+HEF GD + S I L +++ RL+ GY + + VL D+++++K
Sbjct: 440 GCSYVEVE-GVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDK 498
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L+ T PG VRI+KNLRIC DCHL M S++ REIVVRD R
Sbjct: 499 EIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNR 558
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC ++W
Sbjct: 559 FHHFRDGSCSCRDFW 573
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 41/270 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-----REGIGPVSFTLSALFK 60
R +F+++ +N W+ LI GY++ G K+++ L+ M+ + P FT+S +
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDV 119
AC + + G+ +HA I D+ +G +I MY KCG L +++VF+ + ++DV
Sbjct: 208 ACGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+++ +I A G + LF+E+ D
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSD------------------------------ 296
Query: 180 GVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + VT VG++ AC G+I ++ + E G P ++ ++D+Y + G I
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP--SIQHYGCMVDLYGRSGLI 354
Query: 239 DDAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
+A M + +V + S++ G M G
Sbjct: 355 KEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 334/579 (57%), Gaps = 50/579 (8%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQQI 74
+ F++ L+RGY +S++++ M R+G + P SF+ + + KA + G Q+
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA------ 128
H Q L G S L+VG T+IGMY CG + +RKVFDEM + ++V+W +I A
Sbjct: 121 HCQA-LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 129 -------------------------YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
Y G++ESA +F+E+P +D V+W+ M+ G N
Sbjct: 180 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 239
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
E+ YF +Q AG+ + V+L GV+SAC+Q G ++ + E +G+ I V
Sbjct: 240 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI--VS 297
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V +ALIDMYS+CG++ A +F GM++ R + S++SMI G AMHG+ A++LF +M
Sbjct: 298 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 357
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
P+G++FI +L ACSH GL + Y + P +HY CMVDL GR+G L++
Sbjct: 358 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 417
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A + +MP+ P VW LLGAC H N E+A+ L EL+P+ G+ ++LSN YA+
Sbjct: 418 AYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT 477
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
AG W DV+ +R+ + + +KK +S +E + +++F AG+ E + L +++
Sbjct: 478 AGKWKDVASIRKSMIVQRIKKTTAWSLVEVGK-TMYKFTAGEKKKGIDIEAHEKLKEIIL 536
Query: 451 RLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICE 509
RL+ + GY P + S LYDV +EEK+ + HSEKLALAF L S GA +RI+KNLRIC
Sbjct: 537 RLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 596
Query: 510 DCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
DCH M S+V G EI+VRD RFH F+DG CSC +YW
Sbjct: 597 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 313/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G ++S+ + MRREG+ P F L ++F+ C +
Sbjct: 127 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 186
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G+Q+HA ++ G D+ VG+++ MY++CG L V +P +VS +
Sbjct: 187 RDVVTGRQVHAY-VVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 245
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G QN A+EYF M+ GV D
Sbjct: 246 I-------------------------------AGRTQNGDSEGALEYFCMMRSVGVAADV 274
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V IS+C+ L + + +G + V V + L+ MYS+CG + D+ R+F
Sbjct: 275 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKV--VPVMTCLVHMYSRCGCLGDSERVF 332
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
G + F S+MI + HG AI+LF M+ +P+ VTF+ +L ACSH GLK
Sbjct: 333 FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 392
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS HY C+VDLLGR+GCL+EA ++ MP+ P+G +W LL A
Sbjct: 393 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +N ++A+ A + EL+P +Y++LSNI A++ W DVS VR+ ++ ++K P
Sbjct: 453 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 512
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH+F GD +HP EI + L +++ +++ GY P++ VL+D+ DEEK
Sbjct: 513 GVSWVEL-KGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEK 571
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L+ G +R+MKNLR+C+DCHL + SQV GREIVVRD R
Sbjct: 572 EVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSR 631
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG+CSC +YW
Sbjct: 632 FHHFKDGRCSCRDYW 646
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
S LF+AC + + +Q+HA G T D + N ++ Y G L +R++F+ +
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAAT-DRFTANHLMLAYADLGDLTAARELFERI 102
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P R+V+SW L Y NGD+ A LF+E+P ++ W AMV G E++ +F
Sbjct: 103 PRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 162
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M+ G+ D L V CA L + V SG ++ VGS+L MY +
Sbjct: 163 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMR 220
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + + + + ++ S +++I G +G + A++ F M + VTF+
Sbjct: 221 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 280
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
+++CS H + GV C+V + R GCL ++ ++
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 331
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/556 (41%), Positives = 321/556 (57%), Gaps = 53/556 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE- 64
R F+ + ++ W A++ GY G ++++ L+ M GI P T + AC+
Sbjct: 214 RRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSR 273
Query: 65 ---VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
L SL + +H + I L F
Sbjct: 274 GDPCLAASLVRTLHQKRIQLNCFVR----------------------------------- 298
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T L+ YA GD++SA LFN +P ++ V W +M+ GY QN + AIE F+ M A
Sbjct: 299 -TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 357
Query: 182 ET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG-SALIDMYSKCGSID 239
T D VT+V VISAC LG ++ NWV + I + G +A+I MYS+CGS++
Sbjct: 358 LTPDEVTMVSVISACGHLGALELGNWVVRFLTEN---QIKLSISGHNAMIFMYSRCGSME 414
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA R+F M R+V SY+++I GFA HG AI L M + +P+ VTFIGVLTACS
Sbjct: 415 DAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 474
Query: 300 HVGLKCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H GL G P+ DHYACMVDLLGR G LE+A + +E+MP+EP+ GV+G+LL
Sbjct: 475 HAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLN 534
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
A +IH+ E+ ++AAN LFELEPD GN+I+LSNIYASAG W DV R+R +K G+KK
Sbjct: 535 ASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKT 594
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+SW+E G +H+F D +H S +I Q L +L +++ GY + VL DV +EE
Sbjct: 595 TGWSWVEYG-GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEE 653
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ I+ THSEKLA+ + LL + GA +R++KNLR+C DCH + S++ GR I+VRDN
Sbjct: 654 KEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNN 713
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F DG CSC +YW
Sbjct: 714 RFHCFNDGLCSCKDYW 729
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 190/381 (49%), Gaps = 55/381 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ L+F N F++T+++R Y LQ H K + +Y M+ G+ P +F L K+
Sbjct: 52 YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAK-VVLMYEQMQGCGVRPDAFVYPILIKSA 110
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--------- 113
+ G HA + LG SD +V N +I MY + G +G +RKVFDE
Sbjct: 111 G-----TGGIGFHAHVLKLG-HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVA 164
Query: 114 ------------------------MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
MPER+V++WT ++ YA D+E+A F+ +P +
Sbjct: 165 DWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERS 224
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
V+W AM++GY QN EA+ F+ M AG+E D T V VISAC+ G A +
Sbjct: 225 VVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
N V +AL+DMY+K G +D A ++F M RNV +++SMI G+A +G++
Sbjct: 285 TLHQKRIQL--NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQS 342
Query: 270 HAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYAC 317
AI+LF +M+ + P+ VT + V++AC H+G G + S +
Sbjct: 343 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNA 402
Query: 318 MVDLLGRAGCLEEALKMVEKM 338
M+ + R G +E+A ++ ++M
Sbjct: 403 MIFMYSRCGSMEDAKRVFQEM 423
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
LFN + +T+M+ Y + + +E+MQ GV D +I + G+
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSS 258
+A+ V ++ GS + V +A+IDMY++ G I A ++F + +R V +++
Sbjct: 116 GFHAH-VLKLGHGS------DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNA 168
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSP--S 311
M+ G+ A LF M + N +T+ ++T + V + + P S
Sbjct: 169 MVSGYWKWESEGQAQWLFDVM----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPERS 224
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGACQIHRNPEIA 363
+ M+ + G EEAL++ ++M +EP+ W ++ AC +P +A
Sbjct: 225 VVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLA 279
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 334/579 (57%), Gaps = 50/579 (8%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQQI 74
+ F++ L+RGY +S++++ M R+G + P SF+ + + KA + G Q+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA------ 128
H Q L G S L+VG T+IGMY CG + +RKVFDEM + ++V+W +I A
Sbjct: 129 HCQA-LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 129 -------------------------YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
Y G++ESA +F+E+P +D V+W+ M+ G N
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
E+ YF +Q AG+ + V+L GV+SAC+Q G ++ + E +G+ I V
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI--VS 305
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V +ALIDMYS+CG++ A +F GM++ R + S++SMI G AMHG+ A++LF +M
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
P+G++FI +L ACSH GL + Y + P +HY CMVDL GR+G L++
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A + +MP+ P VW LLGAC H N E+A+ L EL+P+ G+ ++LSN YA+
Sbjct: 426 AYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT 485
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
AG W DV+ +R+ + + +KK +S +E + +++F AG+ E + L +++
Sbjct: 486 AGKWKDVASIRKSMIVQRIKKTTAWSLVEVGK-TMYKFTAGEKKKGIDIEAHEKLKEIIL 544
Query: 451 RLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICE 509
RL+ + GY P + S LYDV +EEK+ + HSEKLALAF L S GA +RI+KNLRIC
Sbjct: 545 RLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 604
Query: 510 DCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
DCH M S+V G EI+VRD RFH F+DG CSC +YW
Sbjct: 605 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 313/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G +DS+ + +MRREG+ P F L ++F+ C +
Sbjct: 128 RELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGL 187
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LDV G+Q+HA ++ G SD+ VGN++ MY++CG L V +P +VS+
Sbjct: 188 LDVVSGRQVHAY-VVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTT 246
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G QN A+EYF M+ V D
Sbjct: 247 I-------------------------------AGRTQNGDSEGALEYFSMMRGVEVAPDV 275
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V IS C+ L + V +G + V+ ++L+ MYS+CG + D+ R++
Sbjct: 276 VTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVI--TSLVHMYSRCGCLGDSERVY 333
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
G ++F S+MI HG+ H A++LF M+ +PN VTF+ +L ACSH GLK
Sbjct: 334 DGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKD 393
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG PS HY C+VDLLGR+GCL+EA ++ MPV +G +W LL A
Sbjct: 394 EGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +N ++A+ A + E +P Y++LSNI A++ W DV+ VR++++ ++K P
Sbjct: 454 CKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEP 513
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G +H+F GD +HP EI + L +++ +++ GY P++ V +D+ DEEK
Sbjct: 514 GVSWVE-HKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEK 572
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L G +R+MKNLR+C+DCH+ + SQV GREIVVRD R
Sbjct: 573 EVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSR 632
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG+CSCG+YW
Sbjct: 633 FHHFRDGRCSCGDYW 647
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 17/293 (5%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
S +F+AC + L +Q+HA G +D + N ++ Y G L +R +F+ +
Sbjct: 48 FSHIFRACRAI---PLLRQLHAFAATSG-AAADRFTTNNLLLAYADLGDLPTARHLFEGI 103
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
+R+V+SW LI NGD+ SA LF+++P ++ W AMV G +++++F
Sbjct: 104 SKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFL 163
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M+ G+ D L V CA L + V SG +++ VG++L MY +
Sbjct: 164 AMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMD--SDMCVGNSLAHMYMR 221
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + + + + + S+++ I G +G + A++ F M E P+ VTF+
Sbjct: 222 CGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSA 281
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
++ CS H + GV +V + R GCL ++ ++ +
Sbjct: 282 ISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYD 334
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/542 (39%), Positives = 313/542 (57%), Gaps = 47/542 (8%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
L ++IR Y S+ +Y M + GI P S T + K+ ++ LG+ IH
Sbjct: 109 LCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHC-C 167
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF S++YV ++ MY C + +R+VFDE+P+R++VSW LI
Sbjct: 168 IIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALI------------ 215
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
TGY N R+ I+ F MQ AG + VT+VGV+ ACA L
Sbjct: 216 -------------------TGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHL 256
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G + W+ + + + NV VG+ALIDMY+KCG +D+A +IF M+ +NV++++
Sbjct: 257 GALNQGRWIDDYIDHNRLRL--NVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNV 314
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCY 306
+I G+AM+GR +A+Q F M+ + KP+ VTF+GVL AC H GL + +
Sbjct: 315 LISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEF 374
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G+ P +HY CMVDLLGRAG L+EA ++++ M ++P+ +W LLGAC+IH N ++ + A
Sbjct: 375 GLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFA 434
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
L ELEP+ NY++L+N+YA WD V VR ++ ++K PG S +E D V++
Sbjct: 435 IKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEID-NVVY 493
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
EF + P E+ + L D+ +L+ GY + YD+ +EEK+ LM HSEKLAL
Sbjct: 494 EFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHSEKLAL 553
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGLL + G T+RI+KNLRIC+DCH F S+V R+I VRD RFHHF G CSC +
Sbjct: 554 AFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGACSCKD 613
Query: 547 YW 548
YW
Sbjct: 614 YW 615
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 40/286 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N W ALI GY + I ++ M+ G PV T+ + AC +
Sbjct: 197 RQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHL 256
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ I I +++VG +I MY KCG + + K+F M ++V +W L
Sbjct: 257 GALNQGRWID-DYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVL 315
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG ES A++ F RM + D
Sbjct: 316 ISGYAMNGRGES-------------------------------ALQAFSRMIMEKFKPDE 344
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +GV+ AC G++ + + E G P + ++D+ + G +D+A ++
Sbjct: 345 VTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRP--RIEHYGCMVDLLGRAGFLDEAQQL 402
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNG 288
M + +LG R H IQL +K E +PN
Sbjct: 403 IQAMSMQPDPIIWRELLGAC---RIHGNIQLGEFAIKKLLELEPNN 445
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 319/558 (57%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F+++ ++ WTALI GY +D++ L M R G+ P FTL++L KA +
Sbjct: 68 YARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAAS 127
Query: 64 EV--LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
V DV G+Q+H L G+ S++YV ++ MY +C L ++ +FD M
Sbjct: 128 GVGSTDVLQGRQLHG-LCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS----- 181
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
K++V+W A++ GY + + +A F M V
Sbjct: 182 --------------------------KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENV 215
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + T V+ ACA +G ++ WV + G + VG+ L+DMY+K GSI+DA
Sbjct: 216 KPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV--AFVGNTLLDMYAKSGSIEDA 273
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F + +R+V S++SM+ G++ HG A+Q F +M++T PN +TF+ VLTACSH
Sbjct: 274 KKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHA 333
Query: 302 GL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL K Y V P HY MVDLLGRAG L+ A++ + +MP++P VWGAL
Sbjct: 334 GLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGAL 393
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H+N E+ AA +FEL+ G +++L NIYA AG W+D ++VR+++K +G+K
Sbjct: 394 LGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVK 453
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K P SW+E + V H F A D HP EI + D+++ GY P+ VL +
Sbjct: 454 KEPACSWVEMENEV-HVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQ 512
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+E++ L HSEKLALAF LL T PG+T+RI KN+RIC DCH S+++ REI+VRD
Sbjct: 513 QEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRD 572
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF DG CSC +YW
Sbjct: 573 TNRFHHFCDGACSCEDYW 590
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 127/252 (50%), Gaps = 46/252 (18%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L K CT + ++ G+ IHA +L F DL + NT++ +Y KCG L +RK+FDEM R
Sbjct: 21 LLKRCTHLNKLNEGKIIHA-LLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DVV+WT A++TGY Q+ +P++A+ M
Sbjct: 80 DVVTWT-------------------------------ALITGYSQHDRPQDALLLLPEML 108
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG-------FGPINNVVVGSALID 230
G++ + TL ++ A + +G ++ +G +G +NV V A++D
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGST-------DVLQGRQLHGLCLRYGYDSNVYVSCAILD 161
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY++C +++A IF M +N S++++I G+A G+ A LF +M++ KP T
Sbjct: 162 MYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFT 221
Query: 291 FIGVLTACSHVG 302
+ VL AC+ +G
Sbjct: 222 YSSVLCACASMG 233
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 319/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFEQ+ N WTA+I Y G K++I L+C M I P F+ S++ KAC
Sbjct: 109 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 168
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+Q+++ + LG S VGN++I MY
Sbjct: 169 LSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMY-------------------------- 201
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ME A F+ L K+ V++ A+V GY +N K EA F + G+
Sbjct: 202 -----ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G + + G+ +N + +ALI MYS+CG+I+ A+++
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAFQV 314
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++SMI GFA HG A A+++F M++T TKPN +T++ VL+ACSHVG+
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P +HYACMVDLLGR+G L EA++ + MP+ + VW LLG
Sbjct: 375 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 434
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EPD YI+LSN++ASAG W DV ++R+ +K L K
Sbjct: 435 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 494
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H F G+ +HP + +I Q L L +++ GY P+ VL+D+ +E+
Sbjct: 495 AGCSWIEVENRV-HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 553
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HSEK+A+AFGL++TS +RI KNLR+C DCH + S GREIVVRD+
Sbjct: 554 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 613
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH ++G CSC +YW
Sbjct: 614 RFHHIKNGVCSCNDYW 629
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 36/298 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I + G +D+I L+ M G P FT S++ ACTE+
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
++LG+Q+H++ I L G D+ VG +++ MY KC G + SRKVF++MPE +V+SWT
Sbjct: 67 LALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I AYA +G+ + +EAIE F +M + +
Sbjct: 126 IITAYAQSGECD------------------------------KEAIELFCKMISGHIRPN 155
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+ AC L V A G +N VG++LI MY++ G ++DA +
Sbjct: 156 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKA 213
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + ++N+ SY++++ G+A + ++ A LF ++ T + TF +L+ + +G
Sbjct: 214 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
KVFD+MPER++V+WT M+T + Q R+
Sbjct: 6 KVFDKMPERNLVTWT-------------------------------LMITRFAQLGCARD 34
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
AI+ F M+ +G D T V+SAC +LG++ + G +V VG +L
Sbjct: 35 AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL--DVCVGCSL 92
Query: 229 IDMYSKC---GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTET 284
+DMY+KC GS+DD+ ++F M + NV S++++I +A G AI+LF M+
Sbjct: 93 VDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHI 152
Query: 285 KPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYAC----MVDLLGRAGCLEEALK 333
+PN +F VL AC ++ + Y V C ++ + R+G +E+A K
Sbjct: 153 RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARK 212
Query: 334 ----MVEKMPVEPNGGVWG 348
+ EK V N V G
Sbjct: 213 AFDILFEKNLVSYNAIVDG 231
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 25/132 (18%)
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY++F M +RN+ +++ MI FA G A AI LF DM + P+ T+ VL+AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 301 VGL-------------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+GL C G S + C D G ++++ K+ E+MP E
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD-----GSVDDSRKVFEQMP-E 117
Query: 342 PNGGVWGALLGA 353
N W A++ A
Sbjct: 118 HNVMSWTAIITA 129
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 320/560 (57%), Gaps = 51/560 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ VF + N F W +IRGY + + Y M + P + T L KA
Sbjct: 69 SYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAI 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ L+V G+ IH+ TI GF S ++V N+++ +Y CG
Sbjct: 129 SKSLNVREGEAIHSVTIR-NGFESLVFVQNSLLHIYAACG-------------------- 167
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D ESA +F + +D VAW +M+ G+ N +P EA+ F M GVE
Sbjct: 168 -----------DTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVE 216
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V ++SA A+LG ++ V G N V ++L+D+Y+KCG+I +A
Sbjct: 217 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLS--KNSHVTNSLLDLYAKCGAIREAQ 274
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M +RN S++S+I+G A++G A++LF +M P+ +TF+GVL ACSH G
Sbjct: 275 RVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCG 334
Query: 303 L-------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ +C G+ P +HY CMVDLL RAG +++A + ++ MPV+PN +W
Sbjct: 335 MLDEGFEYFRRMKEEC-GIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 393
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC IH + + +IA +HL LEP G+Y++LSN+YAS W DV +RR + G+
Sbjct: 394 LLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGV 453
Query: 410 KKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KK PGYS +E G+R ++EF GD +HP S ++ L + + L+ +GY P+ +VL D+
Sbjct: 454 KKTPGYSLVELGNR--VYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADI 511
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK++ L HSEK+A+AF LL T PG +R+MKNLR+C DCH+ + +++ REIV+
Sbjct: 512 EEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVI 571
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+ G CSC +YW
Sbjct: 572 RDRSRFHHFRGGSCSCKDYW 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 119/231 (51%), Gaps = 14/231 (6%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ M A +F + + W ++ GY ++ P A ++ +M + VE D T +
Sbjct: 65 SAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFL 124
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ A ++ ++ + + +GF + V V ++L+ +Y+ CG + AY++F MK+R
Sbjct: 125 LKAISKSLNVREGEAIHSVTIRNGFESL--VFVQNSLLHIYAACGDTESAYKVFELMKER 182
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------H 300
++ +++SMI GFA++GR + A+ LF +M +P+G T + +L+A + H
Sbjct: 183 DLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVH 242
Query: 301 VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
V L G+S ++ ++DL + G + EA ++ +M E N W +L+
Sbjct: 243 VYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS-ERNAVSWTSLI 292
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 319/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFEQ+ N WTA+I Y G K++I L+C M I P F+ S++ KAC
Sbjct: 114 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+Q+++ + LG S VGN++I MY
Sbjct: 174 LSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMY-------------------------- 206
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ME A F+ L K+ V++ A+V GY +N K EA F + G+
Sbjct: 207 -----ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G + + G+ +N + +ALI MYS+CG+I+ A+++
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEAAFQV 319
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++SMI GFA HG A A+++F M++T TKPN +T++ VL+ACSHVG+
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P +HYACMVDLLGR+G L EA++ + MP+ + VW LLG
Sbjct: 380 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 439
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EPD YI+LSN++ASAG W DV ++R+ +K L K
Sbjct: 440 ACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKE 499
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H F G+ +HP + +I Q L L +++ GY P+ VL+D+ +E+
Sbjct: 500 AGCSWIEVENRV-HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQ 558
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HSEK+A+AFGL++TS +RI KNLR+C DCH + S GREIVVRD+
Sbjct: 559 KEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSN 618
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH ++G CSC +YW
Sbjct: 619 RFHHIKNGVCSCNDYW 634
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 36/298 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I + G +D+I L+ M G P FT S++ ACTE+
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
++LG+Q+H++ I L G D+ VG +++ MY KC G + SRKVF++MPE +V+SWT
Sbjct: 72 LALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I AYA +G+ + +EAIE F +M + +
Sbjct: 131 IITAYAQSGECD------------------------------KEAIELFCKMISGHIRPN 160
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+ AC L V A G +N VG++LI MY++ G ++DA +
Sbjct: 161 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKA 218
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + ++N+ SY++++ G+A + ++ A LF ++ T + TF +L+ + +G
Sbjct: 219 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
KVFD+MPER++V+WT M+T + Q R+
Sbjct: 11 KVFDKMPERNLVTWT-------------------------------LMITRFAQLGCARD 39
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
AI+ F M+ +G D T V+SAC +LG++ + G +V VG +L
Sbjct: 40 AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL--DVCVGCSL 97
Query: 229 IDMYSKC---GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTET 284
+DMY+KC GS+DD+ ++F M + NV S++++I +A G AI+LF M+
Sbjct: 98 VDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHI 157
Query: 285 KPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYAC----MVDLLGRAGCLEEALK 333
+PN +F VL AC ++ + Y V C ++ + R+G +E+A K
Sbjct: 158 RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARK 217
Query: 334 ----MVEKMPVEPNGGVWG 348
+ EK V N V G
Sbjct: 218 AFDILFEKNLVSYNAIVDG 236
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 25/132 (18%)
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY++F M +RN+ +++ MI FA G A AI LF DM + P+ T+ VL+AC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 301 VGL-------------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+GL C G S + C D G ++++ K+ E+MP E
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD-----GSVDDSRKVFEQMP-E 122
Query: 342 PNGGVWGALLGA 353
N W A++ A
Sbjct: 123 HNVMSWTAIITA 134
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 326/557 (58%), Gaps = 20/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F+Q+ + W ++I GY QG+ ++ + M + + P FTL ++ AC
Sbjct: 233 LFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRE 292
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVVSWTE 124
+ LG+QIHA I+ VGN +I MY K G + + ++ + P +V+++T
Sbjct: 293 SLKLGKQIHAH-IVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GD++ A +F+ L +D VAWTAM+ GY QN +A+ F M G + +
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+S + L + + + +A +++V VG+ALI MYS+ GSI DA +I
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVA--IRLEEVSSVSVGNALITMYSRSGSIKDARKI 469
Query: 245 FVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + R+ +++SMIL A HG + AI+LF M++ KP+ +T++GVL+AC+HVGL
Sbjct: 470 FNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGL 529
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ + P++ HYACM+DLLGRAG LEEA + MP+EP+ WG+LL
Sbjct: 530 VEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C++H+ ++A++AA L ++P+ G Y+ L+N ++ G W+D ++VR+ +K +KK
Sbjct: 590 SSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKK 649
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G+SW++ + +H F D HP I + + ++ G+ P+ SVL+D+ E
Sbjct: 650 EQGFSWVQ-IKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQE 708
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K++IL HSEKLA+AF L+ T TVRIMKNLR+C DCH + S ++ REI+VRD
Sbjct: 709 VKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDA 768
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 769 TRFHHFKDGSCSCQDYW 785
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 46/425 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + WT +I GY G K ++ + M GI P FT + + +C
Sbjct: 99 RRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAA 158
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G+++H+ + LG + + V N+++ MY KCG ++ VFD M +D +W +
Sbjct: 159 QALDVGKKVHSFVVKLGQ-SGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTM 217
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
I + + A LF+++ D V+W +++TGY A+E F M + + ++ D
Sbjct: 218 ISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPD 277
Query: 185 YVTLVGVISACA-----QLGVIKYANWV---CEIAEGSGFG------------------- 217
TL V+SACA +LG +A+ V +IA G
Sbjct: 278 KFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVE 337
Query: 218 ----PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
P NV+ ++L+D Y K G ID A IF +K R+V ++++MI+G+A +G A+
Sbjct: 338 ITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDAL 397
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA------CMVDLL 322
LF M++ KPN T VL+ S + G + + V+ + + ++ +
Sbjct: 398 VLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMY 457
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH--RNPEIAQIAANHLFELEPDKIGN 380
R+G +++A K+ + + W +++ + H N I L+PD I
Sbjct: 458 SRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITY 517
Query: 381 YIILS 385
+LS
Sbjct: 518 VGVLS 522
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 42/358 (11%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L ++ + D +G+ IHA+ I G +++ N ++ +YVK G + ++FDEMP +
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
SW ++ A+A G+++SA +F+E+P D V+WT M+ GY + A+ F RM
Sbjct: 78 TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137
Query: 178 YAGVETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+G+ T V+++CA + K ++V ++ + SG P+ N +L++MY+
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQ-SGVVPVAN-----SLLNMYA 191
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG A +F M+ ++ ++++MI + A+ LF M T P+ V++
Sbjct: 192 KCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNS 247
Query: 294 VLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++T H G Y + RA LE M++ ++P+ G++L A
Sbjct: 248 IITGYCHQG---YDI---------------RA--LETFSFMLKSSSLKPDKFTLGSVLSA 287
Query: 354 CQIHRNPEIAQIAANHLFELEPD---KIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
C + ++ + H+ + D +GN +I ++YA +G V R++++TG
Sbjct: 288 CANRESLKLGKQIHAHIVRADVDIAGAVGNALI--SMYAKSGA---VEVAHRIVEITG 340
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 43/267 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ +K+++ WTA+I GY G + D++ L+ M REG P ++TL+A+ + +
Sbjct: 366 RAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSL 425
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTE 124
+ G+Q+HA I L +S + VGN +I MY + G + +RK+F+ + RD ++WT
Sbjct: 426 ASLDHGKQLHAVAIRLEEVSS-VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTS 484
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I++ A + GL N EAIE FE+M ++ D
Sbjct: 485 MILSLAQH-------GLGN------------------------EAIELFEKMLRINLKPD 513
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA----LIDMYSKCGSIDD 240
++T VGV+SAC +G+++ + + ++N+ S+ +ID+ + G +++
Sbjct: 514 HITYVGVLSACTHVGLVEQGKSYFNLMKN-----VHNIEPTSSHYACMIDLLGRAGLLEE 568
Query: 241 AYRIFVGMK-QRNVFSYSSMILGFAMH 266
AY M + +V ++ S++ +H
Sbjct: 569 AYNFIRNMPIEPDVVAWGSLLSSCRVH 595
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 319/554 (57%), Gaps = 46/554 (8%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD ++ F+++ K+ W A+I GY G K+++ L+ M + + P T++ +
Sbjct: 160 MDKAQKM-FDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLS 218
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
CT +V LG+QIH+ I GF S+L + N +I +Y KCG
Sbjct: 219 TCTHSGNVELGRQIHSW-IDNHGFGSNLKLVNALIDLYSKCG------------------ 259
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ME A GLF L KD ++W ++ GY +EA+ F+ M G
Sbjct: 260 -------------EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLG 306
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ VT++ ++ ACA LG I W+ + G I N + ++LIDMY+KCG+I+
Sbjct: 307 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEA 366
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F + +++ S ++MI GFAMHGRA AA L M K +P+ +TF+G+L+ACSH
Sbjct: 367 ANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSH 426
Query: 301 VGLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL Y + P +HY CM+DLLGR+G +EA +++ M +EP+G +WG
Sbjct: 427 AGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWG 486
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LL AC+IH+N E+ ++ A L ++EP G+Y++LSNIYA++ WDDV+RVR LL G
Sbjct: 487 SLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKG 546
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK PG S +E D ++HEF GD HP + EI + L ++ L G+ + VL ++
Sbjct: 547 LKKVPGCSSIEID-SMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEM 605
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+E K+ L HSEKLA+AFGL++T PG +RI+KNLR+C +CH S++ REI+
Sbjct: 606 EEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIA 665
Query: 529 RDNMRFHHFQDGKC 542
RD RFHHF+DG C
Sbjct: 666 RDRSRFHHFKDGMC 679
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 191/337 (56%), Gaps = 16/337 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ N W +IRG+ L +++LY M G+ P S+T LFK+C +
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+QIHAQ IL G T DL+V ++I MY + G + + KVFD RDVVS+T +I
Sbjct: 94 AQEGKQIHAQ-ILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMIT 152
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G+M+ A +F+E+P+KD V+W AM++GY + + +EA+E F M V+ D T
Sbjct: 153 GYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDEST 212
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+S C G ++ + + GFG +N+ + +ALID+YSKCG ++ A+ +F G
Sbjct: 213 MATVLSTCTHSGNVELGRQIHSWIDNHGFG--SNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
++ ++V S++++I G+A A+ +F +M+K PN VT + +L AC+H+G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEA 331
K G+ +T ++D+ + G +E A
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
A +F +++ N S+++MI G A+ +A+ L+ M+ PN TF + +C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
H + YG++ + ++ + + G +E+A K+ +
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFD 137
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 321/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G ++S+ + +MRREG+ P + L +LF+ C +
Sbjct: 20 RKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGL 79
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G+Q+HA ++ G D+ VG+++ MY++CGFL
Sbjct: 80 RDVVSGRQVHAY-VVRSGLDRDMCVGSSLAHMYMRCGFLR-------------------- 118
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D E+A LP + V+ ++G QN A+E+F M+ AGVE +
Sbjct: 119 --------DGEAA---LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 167
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V +++C+ L + + +A +G + V V ++L+ MYS+CG + D+ R+
Sbjct: 168 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKV--VPVMTSLVHMYSRCGCLGDSERVC 225
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
+ ++ S+MI + HG A+ LF M+ +PN VTF+ +L ACSH GLK
Sbjct: 226 LEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKD 285
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS HY C+VDLLGR+GCL EA ++ MPV+P+G +W LL A
Sbjct: 286 EGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ + ++A+ A + EL+P +Y++LSNI A++ W+DVS+VR ++ ++K P
Sbjct: 346 CKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEP 405
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH+F GD +H EI + L +++ R++ GY P++ V +D+ DEEK
Sbjct: 406 GVSWVEL-KGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEK 464
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L+ G +R+MKNLR+C+DCH+ + S+VIGREIVVRD R
Sbjct: 465 EVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSR 524
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG+YW
Sbjct: 525 FHHFKDGKCSCGDYW 539
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+SW LI Y NGD+E+A LF+E+P ++ W AMV G + E++ +F M+
Sbjct: 1 MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G++ D L + CA L + V SG ++ VGS+L MY +CG +
Sbjct: 61 GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLD--RDMCVGSSLAHMYMRCGFLR 118
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
D + N+ S ++ I G +G A A++ F M + N VTF+ +T+CS
Sbjct: 119 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 178
Query: 300 -----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
H GV +V + R GCL ++ E++ +E +G
Sbjct: 179 DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDS----ERVCLEYSG 230
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/578 (38%), Positives = 335/578 (57%), Gaps = 50/578 (8%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVLDVSLGQQI 74
+ F++ L+RGY +S++++ M R+G I P SF+ + + KA + G Q+
Sbjct: 236 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQM 295
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA------ 128
H Q L G S L+V T+IGMY +CG +G +RKVFDEMP+ ++V+W ++ A
Sbjct: 296 HCQA-LKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGND 354
Query: 129 -------------------------YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
Y G++E A +F+E+P +D V+W+ M+ G+ N
Sbjct: 355 VSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHN 414
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
E+ YF + A + + V+L GV+SAC+Q G ++ + E SG+ I V
Sbjct: 415 GSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWI--VS 472
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V +ALIDMYS+CG++ A +F GM++ R++ S++SMI G AMHG AI++F +M ++
Sbjct: 473 VNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTES 532
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
P+ ++FI +L ACSH GL + Y + P+ +HY CMVDL GR+G L++
Sbjct: 533 GVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQK 592
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A + +MP+ P VW LLGAC H N E+A+ L EL+P+ G+ ++LSN+YA+
Sbjct: 593 AYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYAT 652
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
AG W DV+ +R+ + + +KK +S +E + +++F A + E + L +++
Sbjct: 653 AGKWKDVASIRKSMIVQRIKKITAWSLVEVGK-TMYKFTACEKKKEIDIEAHEKLKEIIL 711
Query: 451 RLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICE 509
RL+ + GY P + S LYDV +EEK+ + HSEKLALAF L GA +RI+KNLRIC
Sbjct: 712 RLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRICR 771
Query: 510 DCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
DCH M S+V G EIV+RD RFH F+DG CSCG+Y
Sbjct: 772 DCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 81/283 (28%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLK------------------------------- 34
R +F+++ +N W ++ GYI G L+
Sbjct: 359 REIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFN 418
Query: 35 DSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTM 94
+S S + + R + P +L+ + AC++ G+ +H + G++ + V N +
Sbjct: 419 ESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHG-FVEKSGYSWIVSVNNAL 477
Query: 95 IGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
I MY +CG + +R VF+ M E R +VSWT +I A +G E A +FNE
Sbjct: 478 IDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNE--------- 528
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
M +GV D ++ + ++ AC+ G+IK EG
Sbjct: 529 ----------------------MTESGVMPDEISFISLLYACSHAGLIK---------EG 557
Query: 214 SG-FGPINNVV-VGSA------LIDMYSKCGSIDDAYRIFVGM 248
G F + V + A ++D+Y + G + AY M
Sbjct: 558 EGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQM 600
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 325/559 (58%), Gaps = 56/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+ + KN W A+I GY G +++++L+ M EG+ ++ A +AC E+
Sbjct: 216 RVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGEL 275
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G ++H + ++ G S++ V N +I MY KC + + VFD
Sbjct: 276 GCLDEGMRVH-ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFD------------- 321
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
EL + +V+W AM+ G QN +A+ F RMQ V+ D
Sbjct: 322 ------------------ELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI----NNVVVGSALIDMYSKCGSIDDA 241
TLV VI A A + A W+ G+ +V V +ALIDMY+KCG ++ A
Sbjct: 364 FTLVSVIPALADISDPLQARWI------HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIA 417
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++R+V ++++MI G+ HG AA++LF +M PN TF+ VL+ACSH
Sbjct: 418 RILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHA 477
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY MVDLLGRAG L+EA ++KMP++P V+GA
Sbjct: 478 GLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGA 537
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N E+A+ +A +FEL P + +++L+NIYA+A MW DV+RVR ++ GL
Sbjct: 538 MLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGL 597
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG+S ++ + IH F +G H + EI L L++ ++A GY P+ S+ +DV
Sbjct: 598 QKTPGWSIIQL-KNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVE 655
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+ K ++L THSEKLA+AFGL+ T+PG T++I KNLR+C DCH S V GREI++R
Sbjct: 656 DDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMR 715
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSCG+YW
Sbjct: 716 DIQRFHHFKDGKCSCGDYW 734
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 35/298 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+++ ++ W AL+ GY G + ++ + M+ E G P S TL ++ AC
Sbjct: 114 RRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACAN 173
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++ ++ HA I G + V ++ Y KCG + +R VFD MP ++ VSW
Sbjct: 174 ARALAACREAHAFAIR-SGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I YA NGD REA+ F RM GV+
Sbjct: 233 MIDGYAQNGD-------------------------------SREALALFNRMVEEGVDVT 261
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+++ + AC +LG + V E+ G +NV V +ALI MYSKC +D A +
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLD--SNVSVMNALITMYSKCKRVDLASHV 319
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + +R S+++MILG A +G + A++LF M KP+ T + V+ A + +
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 22 ALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILL 81
A +R + L +++ + +M G PV T ++L K C D++ G+ +HAQ +
Sbjct: 29 ARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQ-LAA 87
Query: 82 GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGL 141
G S+ + MY KC +R+VFD M
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRM--------------------------- 120
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLGV 200
P++D+VAW A+V GY +N R A+E RMQ G D +TLV V+ ACA
Sbjct: 121 ----PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARA 176
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+ A SG + NV +A++D Y KCG I A +F M +N S+++MI
Sbjct: 177 LAACREAHAFAIRSGLEELVNV--ATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMI 234
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
G+A +G + A+ LF MV+ V+ + L AC +G
Sbjct: 235 DGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG 276
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 321/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G ++S+ + +MRREG+ P + L +LF+ C +
Sbjct: 128 RKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGL 187
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G+Q+HA ++ G D+ VG+++ MY++CGFL
Sbjct: 188 RDVVSGRQVHAY-VVRSGLDRDMCVGSSLAHMYMRCGFLR-------------------- 226
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D E+A LP + V+ ++G QN A+E+F M+ AGVE +
Sbjct: 227 --------DGEAA---LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 275
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V +++C+ L + + +A +G + V V ++L+ MYS+CG + D+ R+
Sbjct: 276 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKV--VPVMTSLVHMYSRCGCLGDSERVC 333
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
+ ++ S+MI + HG A+ LF M+ +PN VTF+ +L ACSH GLK
Sbjct: 334 LEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKD 393
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS HY C+VDLLGR+GCL EA ++ MPV+P+G +W LL A
Sbjct: 394 EGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ + ++A+ A + EL+P +Y++LSNI A++ W+DVS+VR ++ ++K P
Sbjct: 454 CKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEP 513
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH+F GD +H EI + L +++ R++ GY P++ V +D+ DEEK
Sbjct: 514 GVSWVEL-KGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEK 572
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AF L+ G +R+MKNLR+C+DCH+ + S+VIGREIVVRD R
Sbjct: 573 EVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSR 632
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG+YW
Sbjct: 633 FHHFKDGKCSCGDYW 647
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 17/301 (5%)
Query: 45 REGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL 104
REG+ S +F+AC + L +Q+HA G +D + N ++ Y G
Sbjct: 38 REGLWSEPGLFSHIFRACQAL---PLLRQLHAFAATSG-AAADRFTANHLLLAYADLGDF 93
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
+R +F+ +P+R+V+SW LI Y NGD+E+A LF+E+P ++ W AMV G +
Sbjct: 94 PTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSG 153
Query: 165 KPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
E++ +F M+ G++ D L + CA L + V SG ++ V
Sbjct: 154 LNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLD--RDMCV 211
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
GS+L MY +CG + D + N+ S ++ I G +G A A++ F M
Sbjct: 212 GSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGV 271
Query: 285 KPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALK 333
+ N VTF+ +T+CS H GV +V + R GCL ++ +
Sbjct: 272 EANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSER 331
Query: 334 M 334
+
Sbjct: 332 V 332
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 330/564 (58%), Gaps = 56/564 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM------RREGIGPVSFTLSALF 59
R VF+++ +N WT++IRGY L G+ D++SL+ + + + S L ++
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS--RKVFDEMPER 117
AC+ V L + IH+ ++ GF + VGNT++ Y K G G + RK+FD++ +
Sbjct: 191 SACSRVPAKGLTESIHS-FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD- 248
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
KD+V++ ++++ Y Q+ EA E F R+
Sbjct: 249 ------------------------------KDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 178 YAGVET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
V T + +TL V+ A + G ++ C + G ++V+VG+++IDMY KCG
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGK--CIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A + F MK +NV S+++MI G+ MHG A A++LF M+ + +PN +TF+ VL
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 297 ACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL +GV P +HY CMVDLLGRAG L++A ++++M ++P+
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+W +LL AC+IH+N E+A+I+ LFEL+ G Y++LS+IYA AG W DV RVR ++
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K GL K PG+S LE + G +H F GD HP +I + L +L +L GY N SV
Sbjct: 517 KNRGLVKPPGFSLLELN-GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+DV +EEK+ L HSEKLA+AFG++ T PG+TV ++KNLR+C DCH + S+++ R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
E VVRD RFHHF+DG CSCG+YW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 55/398 (13%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V + F W ++I G +++ + SMR+ + P + KAC+ + D+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+Q H Q + G + SD++V + +I MY CG L +RKVFDE+P+R++VSWT +I Y
Sbjct: 96 KQTHQQAFVFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
NG+ A LF +L + + AM D + LV V
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMF-------------------------LDSMGLVSV 189
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS--IDDAYRIFVGMK 249
ISAC+++ + GF V VG+ L+D Y+K G + A +IF +
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFD--RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-NGVTFIGVLTACSHVGL----K 304
++ SY+S++ +A G ++ A ++F +VK + N +T VL A SH G K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 305 C-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
C G+ ++D+ + G +E A K ++M N W A++ +H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 358 RNPEIAQIAANHLFELEPDKIG-----NYIILSNIYAS 390
+ A EL P I NYI ++ A+
Sbjct: 367 GHAAKA-------LELFPAMIDSGVRPNYITFVSVLAA 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 141 LFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LFN K D +W +++ ++ EA+ F M+ + + I AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + + FG +++ V SALI MYS CG ++DA ++F + +RN+ S++SM
Sbjct: 91 DIFSGKQTHQ--QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF------IGVLTACSHVGLKCYGVSPSTD 313
I G+ ++G A A+ LF D++ E + F + V++ACS V K
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK--------- 199
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE- 372
G E V K + V LL A + E A +F+
Sbjct: 200 ------------GLTESIHSFVIKRGFDRGVSVGNTLLDAYA--KGGEGGVAVARKIFDQ 245
Query: 373 -LEPDKIGNYIILSNIYASAGMWDDVSRV-RRLLK 405
++ D++ I+S +YA +GM ++ V RRL+K
Sbjct: 246 IVDKDRVSYNSIMS-VYAQSGMSNEAFEVFRRLVK 279
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 323/559 (57%), Gaps = 18/559 (3%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKA 61
+ + ++ + F ++IR + + S Y + G + P ++T++ L +A
Sbjct: 58 YANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQA 117
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
CT + G Q+H TI G F +D +V +I +Y + G L KVF+ +P D V
Sbjct: 118 CTGLRMRETGLQVHGMTIRRG-FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVC 176
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T ++ A A GD+ A LF +P +D +AW AM++GY Q + REA+ F MQ GV
Sbjct: 177 RTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV 236
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + V ++ V+SAC QLG + W E + V + + L+D+Y+KCG ++ A
Sbjct: 237 KVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI--TVRLATTLVDLYAKCGDMEKA 294
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F GM+++NV+++SS + G AM+G ++LF M + PN VTF+ VL CS V
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G +G+ P +HY C+VDL RAG LE+A+ ++++MP++P+ VW +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL A ++++N E+ +A+ + ELE G Y++LSNIYA + WD+VS VR+ +K G+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG S +E + G +HEF GD +HP T+I D+ RL+ GY+ + V++D+
Sbjct: 475 RKQPGCSVMEVN-GEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEK A+AFG+++ +RI+KNLR+C DCH S++ REI+VR
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 318/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + + + LW+ LI Y + + ++ M R + P F+LS + +AC V
Sbjct: 306 RTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANV 365
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LGQQIH I LG + S+L+VGN ++ +Y KC
Sbjct: 366 AFLDLGQQIHNLVIKLG-YESELFVGNALMDVYAKCR----------------------- 401
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ME++ +F L ++V+W ++ GY Q+ +A+ F+ M+ A V +
Sbjct: 402 --------NMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQ 453
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V+ ACA IK+ + + E S F N+ +V ++LID Y+KCG I DA ++F
Sbjct: 454 VTFSSVLRACANTASIKHTVQIHSLIEKSTFN--NDTIVCNSLIDTYAKCGCIRDALKVF 511
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ Q +V S++++I G+A+HGRA A++LF M K++TKPN VTF+ +L+ C GL
Sbjct: 512 ESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVN 571
Query: 306 YGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G+S PS DHY C+V LLGRAG L +ALK + +P P+ VW ALL +
Sbjct: 572 QGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSS 631
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N + + +A + E+EP Y++LSN+YA+AG+ D V+ +R+ ++ G+KK
Sbjct: 632 CVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEV 691
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G +H F G HP+ I L L + +GY P++ VL+DV +EEK
Sbjct: 692 GLSWVE-IKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEK 750
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
R+L HSE+LALA+GL T PG +RIMKNLR C DCH S+++ REIVVRD R
Sbjct: 751 ARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINR 810
Query: 534 FHHFQDGKCSCGNYW 548
FHHF +G CSCG+YW
Sbjct: 811 FHHFDEGICSCGDYW 825
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 172/366 (46%), Gaps = 46/366 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF+ + +K+ WTA++ Y +D+++ + MR G P F L+++ KA
Sbjct: 202 SHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAA 261
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ LG+ IH + T + +VG ++ MY KCG++
Sbjct: 262 VCLSSAVLGKGIHGCAVKTLCDT-EPHVGGALLDMYAKCGYI------------------ 302
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
E A +F +P D + W+ +++ Y Q+ + +A E F RM + V
Sbjct: 303 -------------EDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +L GV+ ACA + + + + G+ + + VG+AL+D+Y+KC +++++
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYE--SELFVGNALMDVYAKCRNMENSL 407
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF ++ N S++++I+G+ G A A+ +F +M VTF VL AC++
Sbjct: 408 EIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTA 467
Query: 303 LKCYGV---------SPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ V + + D C ++D + GC+ +ALK+ E + ++ + W A++
Sbjct: 468 SIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAII 526
Query: 352 GACQIH 357
+H
Sbjct: 527 SGYALH 532
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 38/300 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N + L++GY L+G +++ L+ ++REG F L+ + K +
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L IHA LG + +VG+++I Y CG + +R VF D + W
Sbjct: 164 DAPGLTCCIHACACKLG-HDRNAFVGSSLIDAYSLCGAVSHARCVF------DGIIW--- 213
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
KD V WTAMV+ Y +N P +A+ F +M+ AG + +
Sbjct: 214 ----------------------KDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNP 251
Query: 186 VTLVGVISA--CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
L V+ A C V+ C + P VG AL+DMY+KCG I+DA
Sbjct: 252 FVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEP----HVGGALLDMYAKCGYIEDART 307
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F + +V +S +I +A + A ++F M+++ PN + GVL AC++V
Sbjct: 308 VFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAF 367
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 119/300 (39%), Gaps = 45/300 (15%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKV 110
S+ + L + C D G+ +HA+ + GG D + N ++ +Y K G L +R+
Sbjct: 47 SYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR- 105
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
LF+ +P ++ V++ +V GY EA
Sbjct: 106 ------------------------------LFDGMPERNMVSFVTLVQGYALRGGFEEAA 135
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F R+Q G E ++ L ++ + C A G N VGS+LID
Sbjct: 136 GLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLT--CCIHACACKLGHDRNAFVGSSLID 193
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
YS CG++ A +F G+ ++ ++++M+ ++ + A+ F M KPN
Sbjct: 194 AYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFV 253
Query: 291 FIGVLTA--CSHVGLKCYGVSPSTDHYAC---------MVDLLGRAGCLEEALKMVEKMP 339
VL A C + G+ C ++D+ + G +E+A + E +P
Sbjct: 254 LTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIP 313
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 325/559 (58%), Gaps = 50/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R++F+ + ++ W ++I GY+ G + ++ ++ M EG+ P + T+ AC
Sbjct: 183 SIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ D+ G+ +H L SD+ V N++I MY KC ++V
Sbjct: 243 ADLGDLERGKFVHKLVDQLK-LDSDVSVMNSLISMYSKC------KRV------------ 283
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A +F L K V+W AM+ GY QN EA+ F MQ ++
Sbjct: 284 -------------DIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIK 330
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V VI A A+L + + A W+ + NV V +AL+DMY+KCG+I A
Sbjct: 331 PDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLD--KNVFVMTALVDMYAKCGAIHTAR 388
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R+V ++++MI G+ HG +++LF +M K KPN +TF+ L+ACSH G
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSG 448
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L K YG+ P+ DHY MVDLLGRAG L +A ++KMP++P V+GA+
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAM 508
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+IH+N ++ + AA +F+L PD G +++L+NIYA+A MW V++VR +++ +GL+
Sbjct: 509 LGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQ 568
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG S +E G+ +H F +G +HP S +I L L+D ++A GY P+ S+ +DV
Sbjct: 569 KTPGCSLVEIGNE--VHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVE 625
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+ K ++L THSEKLA+AFGLL TS G + I KNLR+C DCH S V GREI+VR
Sbjct: 626 DDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVR 685
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFH F+DG CSCG+YW
Sbjct: 686 DMHRFHLFKDGVCSCGDYW 704
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 34/280 (12%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
+++GY L ++S + M+ + + PV + + L K C + D+ G++IH +++
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHG-SVITS 59
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF+ +L+ ++ MY KC R++ D A +F
Sbjct: 60 GFSWNLFAMTGVVNMYAKC------RQIND-------------------------AYNMF 88
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+ +P +D V W M++GY QN + A+ RM G D +T+V ++ A A +++
Sbjct: 89 DRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLR 148
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
V +GF + NV +AL+DMYSKCGS+ A IF GM R V S++SMI G
Sbjct: 149 IGMAVHGYVLRAGFESLVNV--STALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG 206
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+ G A A+ +F M+ +P VT +G L AC+ +G
Sbjct: 207 YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ W +I GY G K ++ L M EG P S T+ ++ A +
Sbjct: 87 MFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRL 146
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G +H +L GF S + V ++ MY KCG + +R +FD M R VV
Sbjct: 147 LRIGMAVHGY-VLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVV------- 198
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+W +M+ GYVQ+ A+ F++M GV+ VT
Sbjct: 199 ------------------------SWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVT 234
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++G + ACA LG ++ +V ++ + ++V V ++LI MYSKC +D A IF
Sbjct: 235 VMGALHACADLGDLERGKFVHKLVDQLKLD--SDVSVMNSLISMYSKCKRVDIAADIFKN 292
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
++ + + S+++MILG+A +G + A+ F +M KP+ T + V+ A + + +
Sbjct: 293 LRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA 352
Query: 308 -----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ + +VD+ + G + A K+ + M + W A++
Sbjct: 353 KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGT 411
Query: 357 H 357
H
Sbjct: 412 H 412
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ GY +++ A+ +F RM++ V ++ C +K + SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
F N+ + +++MY+KC I+DAY +F M +R++ +++MI G+A +G A A+ L
Sbjct: 61 FSW--NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS 309
M + +P+ +T + +L A + L G++
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMA 152
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 319/555 (57%), Gaps = 24/555 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ W +I GY G L + L+ + FT +A+
Sbjct: 224 RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGY--- 276
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G A+T + N MI YV+ + +R++F+ MP R++ SW +
Sbjct: 277 --VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTM 334
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y GD+ A F+ +P +D V+W A++ GY Q+ EA+ F ++ G +
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNR 394
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +S CA + ++ + A G+G VG+AL+ MY KCGSID+A F
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYG--TGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+++++V S+++M+ G+A HG A+ +F M KP+ +T +GVL+ACSH GL
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLD 512
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YGV P++ HY CM+DLLGRAG LEEA ++ MP +P WGALLGA
Sbjct: 513 RGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH N E+ + AA +F++EP G Y++LSN+YA++G W D ++R ++ G++K P
Sbjct: 573 SRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVP 632
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + IH F GD +HP I L +L +++ +GY + VL+DV +EEK
Sbjct: 633 GYSWVEV-QNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEK 691
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFG+LT G +R+MKNLR+CEDCH + S+++GR I++RD+ R
Sbjct: 692 EHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHR 751
Query: 534 FHHFQDGKCSCGNYW 548
FHHF +G CSCG+YW
Sbjct: 752 FHHFNEGFCSCGDYW 766
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 19/297 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W +L+ GY G++ ++ ++ +M + S + + L A
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAY--- 183
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ A + DL N ++G +V+ LG +R +FD+MP RD +SW +
Sbjct: 184 --VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA G + A LF+E P +D WTAMV+GYVQN EA +F+ M E +
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNE 297
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +I+ Q + A + E P N+ + +I Y + G I A + F
Sbjct: 298 VSYNAMIAGYVQTKKMDIARELFESM------PCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M QR+ S++++I G+A G A+ +F ++ + N TF L+ C+ +
Sbjct: 352 DMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 23/345 (6%)
Query: 11 QVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL 70
+VK + W I ++ GH ++ ++ +M R + +S + L +L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
Q+ + DL+ N M+ YV+ LG +R++FD MPE+DVVSW L+ YA
Sbjct: 103 FDQMPER---------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYA 153
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NG ++ A +F+ +P K+ ++W ++ YV N + EA FE + + D ++
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNC 209
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++ + + A W+ + P+ + + + +I Y++ G + A R+F
Sbjct: 210 LMGGFVRKKKLGDARWLFDKM------PVRDAISWNTMISGYAQGGGLSQARRLFDESPT 263
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVS 309
R+VF++++M+ G+ +G A F +M K E N + V T + + +
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM 323
Query: 310 P--STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P + + M+ G+ G + +A K + MP + + W A++
Sbjct: 324 PCRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIA 367
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 118/245 (48%), Gaps = 60/245 (24%)
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
Y V+P++ HY CM+DLLGR LEE GALLGA +IH N E+ +
Sbjct: 794 YSVTPTSKHYTCMIDLLGRVDRLEE-----------------GALLGASRIHGNTELGEK 836
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
AA F++ P G +S++R + G++K PGYSW E + I
Sbjct: 837 AAQMFFKMGPQNSG-----------------ISKMRDV----GVQKVPGYSWFEV-QNKI 874
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
H F ++G L R + + G+ L + +EEK+R L SE L
Sbjct: 875 HTF---------------SVGLFLSRERENIGFLEEL-DLKMREREEEKERTLKYLSENL 918
Query: 485 ALAFGLLTTSPGATVRIMKN-LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
A A G+LT G R+MK + +CEDC + S+++GR I +RD+ H F + CS
Sbjct: 919 AAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESICS 975
Query: 544 CGNYW 548
CG YW
Sbjct: 976 CGEYW 980
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 319/555 (57%), Gaps = 24/555 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ W +I GY G L + L+ + FT +A+
Sbjct: 224 RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGY--- 276
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G A+T + N MI YV+ + +R++F+ MP R++ SW +
Sbjct: 277 --VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTM 334
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y GD+ A F+ +P +D V+W A++ GY Q+ EA+ F ++ G +
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNR 394
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +S CA + ++ + A G+G VG+AL+ MY KCGSID+A F
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYG--TGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+++++V S+++M+ G+A HG A+ +F M KP+ +T +GVL+ACSH GL
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLD 512
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YGV P++ HY CM+DLLGRAG LEEA ++ MP +P WGALLGA
Sbjct: 513 RGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH N E+ + AA +F++EP G Y++LSN+YA++G W D ++R ++ G++K P
Sbjct: 573 SRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVP 632
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + IH F GD +HP I L +L +++ +GY + VL+DV +EEK
Sbjct: 633 GYSWVEV-QNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEK 691
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFG+LT G +R+MKNLR+CEDCH + S+++GR I++RD+ R
Sbjct: 692 EHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHR 751
Query: 534 FHHFQDGKCSCGNYW 548
FHHF +G CSCG+YW
Sbjct: 752 FHHFNEGFCSCGDYW 766
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 19/297 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W +L+ GY G++ ++ ++ +M + S + + L A
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAY--- 183
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+ A + DL N ++G +V+ LG +R +FD+MP RD +SW +
Sbjct: 184 --VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA G + A LF+E P +D WTAMV+GYVQN EA +F+ M E +
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNE 297
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +I+ Q + A + E P N+ + +I Y + G I A + F
Sbjct: 298 VSYNAMIAGYVQTKKMDIARELFESM------PCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M QR+ S++++I G+A G A+ +F ++ + N TF L+ C+ +
Sbjct: 352 DMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 23/345 (6%)
Query: 11 QVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL 70
+VK + W I ++ GH ++ ++ +M R + +S + L +L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
Q+ + DL+ N M+ YV+ LG +R++FD MPE+DVVSW L+ YA
Sbjct: 103 FDQMPER---------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYA 153
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NG ++ A +F+ +P K+ ++W ++ YV N + EA FE + + D ++
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNC 209
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++ + + A W+ + P+ + + + +I Y++ G + A R+F
Sbjct: 210 LMGGFVRKKKLGDARWLFDKM------PVRDAISWNTMISGYAQGGGLSQARRLFDESPT 263
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVS 309
R+VF++++M+ G+ +G A F +M K E N + V T + + +
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM 323
Query: 310 P--STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
P + + M+ G+ G + +A K + MP + + W A++
Sbjct: 324 PCRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIA 367
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 326/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G+ K+++ L+ M + + P T+ ++ AC +
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I GF S+L + N +I +Y+KCG
Sbjct: 236 IELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCG------------------------- 269
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 270 ------EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 323
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACA LG I+ W+ G N ++LIDMY+KCG I+ A ++F
Sbjct: 324 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 383
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ R++ S+++MI GFAMHGRA+AA +F M K E +P+ +TF+G+L+ACSH G+
Sbjct: 384 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 443
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 444 RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 503
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+ + A +L ++EP G+Y++LSNIYA+AG W++V+++R LL G+KK PG
Sbjct: 504 MHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 563
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 564 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 622
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 623 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 682
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 683 HFRDGVCSCNDYW 695
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 222/413 (53%), Gaps = 20/413 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W + RG+ L ++ LY M G+ P +T L K+C +
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG + DLYV ++I MYV+ G L +RKVFD+ RDVVS+T LI
Sbjct: 104 FREGQQIHGHVLKLG-YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 162
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G + SA +F+E+P+KD V+W AM++GY + +EA+E F+ M V D T
Sbjct: 163 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 222
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ I+ V + GFG +N+ + +ALID+Y KCG ++ A +F G
Sbjct: 223 MVSVVSACAQSASIELGRQVHSWIDDHGFG--SNLKIVNALIDLYIKCGEVETACGLFEG 280
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC+H+G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ H ++D+ + G +E A ++ + + + + W A++
Sbjct: 341 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGF 399
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+H N + E+EPD I ++ L + + +GM D + R +K
Sbjct: 400 AMHGRANAAFDIFSRMRKNEIEPDDI-TFVGLLSACSHSGMLDLGRHIFRSMK 451
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/613 (35%), Positives = 336/613 (54%), Gaps = 78/613 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDS------------ISLYCSM----RREGIG 49
R VF ++ ++N W L+ Y+ G LK++ IS C M +R +G
Sbjct: 159 REVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLG 218
Query: 50 ---------PVSFTLS--ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMY 98
PV +S + +V D+S +++ ++ + D++ M+ Y
Sbjct: 219 DARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPI-----RDVFTWTAMVSGY 273
Query: 99 VKCGFLGCSRKVFDEMPE-------------------------------RDVVSWTELIV 127
V+ G + +RK FDEMP R++ SW +I
Sbjct: 274 VQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMIT 333
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y NG + A LF+ +P +D V+W A+++GY QN EA+ F M+ G ++ T
Sbjct: 334 GYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRST 393
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+S CA + ++ V +GF VG+AL+ MY KCGS D+A +F G
Sbjct: 394 FSCALSTCADIAALELGKQVHGQVVKAGFE--TGCFVGNALLGMYFKCGSTDEANDVFEG 451
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+++++V S+++MI G+A HG A+ LF M K KP+ +T +GVL+ACSH GL
Sbjct: 452 IEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRG 511
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V P++ HY CM+DLLGRAG LEEA ++ MP +P WGALLGA +
Sbjct: 512 TEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASR 571
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ + AA +F++EP G Y++LSN+YA++G W DV ++R ++ G++K GY
Sbjct: 572 IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGY 631
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + IH F GD HP I L +L +++ +GY + + VL+DV +EEK+
Sbjct: 632 SWVEV-QNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEH 690
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+AFG+LT G +R+MKNLR+C+DCH + S+++GR I++RD+ RFH
Sbjct: 691 MLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFH 750
Query: 536 HFQDGKCSCGNYW 548
HF +G CSCG+YW
Sbjct: 751 HFSEGICSCGDYW 763
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 152/324 (46%), Gaps = 36/324 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS-----A 57
S R +F+++ ++ F W ++ GY+ L ++ L+ M ++ + + LS
Sbjct: 94 SLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG 153
Query: 58 LFKACTEVLD-----------------VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
EV + V G+ A+ + +L N ++G YVK
Sbjct: 154 FVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVK 213
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
LG +R++FD MP RDV+SW +I YA GD+ A LFNE P++D WTAMV+GY
Sbjct: 214 RNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGY 273
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC--EIAEGSGFGP 218
VQN EA +YF+ M E Y ++ G ++Y V E+ E P
Sbjct: 274 VQNGMVDEARKYFDEMPVKN-EISYNAMLA--------GYVQYKKMVIAGELFEAM---P 321
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
N+ + +I Y + G I A ++F M QR+ S++++I G+A +G A+ +F +
Sbjct: 322 CRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVE 381
Query: 279 MVKTETKPNGVTFIGVLTACSHVG 302
M + N TF L+ C+ +
Sbjct: 382 MKRDGESSNRSTFSCALSTCADIA 405
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 166/345 (48%), Gaps = 25/345 (7%)
Query: 12 VKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVS 69
VK+K+P + W I ++ GH ++ ++ SM R S + +A+ S
Sbjct: 39 VKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRS----SVSYNAMISGYLRNAKFS 94
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
L + + + DL+ N M+ YV+ LG + K+FD MP++DVVSW ++ Y
Sbjct: 95 LARDLFDKMP-----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGY 149
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
A NG ++ A +FN++P ++ ++W ++ YV N + +EA FE ++++
Sbjct: 150 AQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFES------QSNW---- 199
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
+IS +G N + + + P+ +V+ + +I Y++ G + A R+F
Sbjct: 200 ELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESP 259
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGLKCYGV 308
R+VF++++M+ G+ +G A + F +M VK E N + V + + +
Sbjct: 260 IRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEA 319
Query: 309 SP--STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
P + + M+ G+ G + +A K+ + MP + + W A++
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMP-QRDCVSWAAII 363
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/563 (37%), Positives = 332/563 (58%), Gaps = 21/563 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSM-RREGIGPVSFTLSALFK 60
S+ +VF+ + FL+ +I+ DS + + S+ R E + P ++ + FK
Sbjct: 51 SYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFK 110
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C + V G+Q+ I LG ++L+V N +IGMYV F+ +RKVFD P RD+
Sbjct: 111 GCGSGVGVLEGEQVRVHAIKLG-LENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMY 169
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW ++ YA G M+ A LF+E+P KD V+WT M++G +Q EA++ F M G
Sbjct: 170 SWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKG 229
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + TL ++ACA L + W+ + + ++ G LIDMY+KCG ++
Sbjct: 230 MSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAG--LIDMYAKCGELEF 287
Query: 241 AYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F +R V+ +++MI GFA+HG++ AI++F M + PN VTF+ +L AC
Sbjct: 288 ASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNAC 347
Query: 299 SHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH Y V P +HY C+VDLLGRAG L+EA +++ M + P+ +
Sbjct: 348 SHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAI 407
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGALL AC+IH++ E+ + + EL+P+ +G +++L+NIY+ G W++ +R +
Sbjct: 408 WGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAE 467
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+G KK PG S +E + G+ H+F GD +HP + ++ L +++ +L+ GY P VL
Sbjct: 468 SGKKKTPGCSSIELN-GMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLL 526
Query: 467 DVSD-EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D+ D E+++ L+ HSEKLA+AFGL+ T+P +RI+KNLR+C DCHL + S+V RE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDRE 586
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD +R+HHF+DG CSC +YW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 316/555 (56%), Gaps = 60/555 (10%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFKACTE 64
L+F + N F A ++ H +I + P FT +++ KAC
Sbjct: 45 LIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAG 104
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ V GQ+IHA + GF S+L+V N++I MY K G+L +R +FDEM RD
Sbjct: 105 LAHVVNGQKIHAM-VTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRD------ 157
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVET 183
++ V W AM+ GY QN K +AIE F MQ + GV
Sbjct: 158 -----------------------RNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVP 194
Query: 184 DYVTLVGVISACAQLGVIKYANWV------CEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ VTLV V+ ACA LG + W+ E+A G + +G+AL DMY+KCG
Sbjct: 195 NDVTLVSVLPACAHLGALDLGKWIDGFISRREMALG--------LFLGNALADMYAKCGC 246
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I +A R+F M++R+V S+S +I G AM+G A A F +M+ KPN V F+G+LTA
Sbjct: 247 ITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTA 306
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+H GL K YGVSP +HY C+VDLL RAG L++A M+ MP++PN
Sbjct: 307 CTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVI 366
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+WGALLG C+I+R+ Q H+ EL+ D G+Y+ L+N+Y+S G DD ++ R ++
Sbjct: 367 IWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMR 426
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+ K PG SW+E D +HEF GDL+HP S +I + +L+ +++ GY+P V+
Sbjct: 427 ENGVLKTPGCSWIEVD-NTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVV 485
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+ + +EEK+ L HSEKLA+AFGL++TS G T+R++KNLRIC DCH S ++ RE
Sbjct: 486 HSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKRE 545
Query: 526 IVVRDNMRFHHFQDG 540
I+VRD RFHHF+DG
Sbjct: 546 IIVRDRSRFHHFKDG 560
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA--G 180
+LI A A++ ++ A +F L + A A + QN+ AI++F +
Sbjct: 28 VKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNA 87
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D T V+ ACA L + + + GF +N+ V ++LIDMY K G +
Sbjct: 88 PNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFE--SNLFVRNSLIDMYFKAGYLLL 145
Query: 241 AYRIFVGM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTA 297
A +F M + RNV +++MI G+A + + AI++F M + PN VT + VL A
Sbjct: 146 ARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPA 205
Query: 298 CSHVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKM 338
C+H+G + D + + D+ + GC+ EA ++ KM
Sbjct: 206 CAHLG--ALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKM 257
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 325/559 (58%), Gaps = 56/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+ + KN W A+I GY G +++++L+ M EG+ ++ A +AC E+
Sbjct: 216 RVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGEL 275
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G ++H + ++ G S++ V N +I MY KC + + VFD
Sbjct: 276 GCLDEGMRVH-ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFD------------- 321
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
EL + +V+W AM+ G QN +A+ F RMQ V+ D
Sbjct: 322 ------------------ELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI----NNVVVGSALIDMYSKCGSIDDA 241
TLV VI A A + A W+ G+ +V V +ALIDMY+KCG ++ A
Sbjct: 364 FTLVSVIPALADISDPLQARWI------HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIA 417
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++R+V ++++MI G+ HG AA++LF +M PN TF+ VL+ACSH
Sbjct: 418 RILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHA 477
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY MVDLLGRAG L+EA ++KMP++P V+GA
Sbjct: 478 GLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGA 537
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N E+A+ +A +FEL P + +++L+NIYA+A MW DV+RVR ++ GL
Sbjct: 538 MLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGL 597
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG+S ++ + IH F +G H + EI L L++ ++A GY P+ S+ +DV
Sbjct: 598 QKTPGWSIIQL-KNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVE 655
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+ K ++L THSEKLA+AFGL+ T+PG T++I KNLR+C DCH S V GREI++R
Sbjct: 656 DDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMR 715
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSCG+YW
Sbjct: 716 DIQRFHHFKDGKCSCGDYW 734
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 35/298 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+++ ++ W AL+ GY G + ++ + M+ E G P S TL ++ AC
Sbjct: 114 RRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACAN 173
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++ ++ HA I G + V ++ Y KCG + +R VFD MP ++ VSW
Sbjct: 174 ARALAACREAHAFAIR-SGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I YA NGD REA+ F RM GV+
Sbjct: 233 MIDGYAQNGD-------------------------------SREALALFNRMVEEGVDVT 261
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+++ + AC +LG + V E+ G +NV V +ALI MYSKC +D A +
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLD--SNVSVMNALITMYSKCKRVDLASHV 319
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + +R S+++MILG A +G + A++LF M KP+ T + V+ A + +
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
L +++ + +M G PV T ++L K C D++ G+ +HAQ + G S+
Sbjct: 40 LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQ-LAARGIDSEALAAT 98
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+ MY KC +R+VFD M P++D+VA
Sbjct: 99 ALANMYAKCRRPADARRVFDRM-------------------------------PVRDRVA 127
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
W A+V GY +N R A+E RMQ G D +TLV V+ ACA + A
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
SG + NV +A++D Y KCG I A +F M +N S+++MI G+A +G +
Sbjct: 188 IRSGLEELVNV--ATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
A+ LF MV+ V+ + L AC +G
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELG 276
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 313/554 (56%), Gaps = 47/554 (8%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++F V+ K W A+I GY+ G K+ + ++ M TL ++ AC +
Sbjct: 227 VLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLG 286
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D +LGQ I A+ G + ++ MY KCG
Sbjct: 287 DANLGQWI-AEYAEEKGMLRSRNLATALVDMYAKCG------------------------ 321
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+++ A LF+ + +D VAW+AM++GY Q+ + REA+ F MQ V + V
Sbjct: 322 -------ELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDV 374
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V V+SACA LG ++ WV P+ V++G+AL+D Y+KCG I DA + F
Sbjct: 375 TMVSVLSACAVLGALETGKWVHSYIRRKDL-PLT-VILGTALVDFYAKCGCIKDAVKAFE 432
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M RN ++++++I G A +GR+ A++LF M++ +P VTFIGVL ACSH L
Sbjct: 433 SMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE 492
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P +HY CMVDLLGRAG ++EA + + MP+EPN VW ALL AC
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSAC 552
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+H+N EI + A + L+P GNYI+LSN YAS G W + + VR+ +K G++K PG
Sbjct: 553 TVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPG 612
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
S +E + G I EF A D HP TEI + + ++++ ++ GY PN DV + EK+
Sbjct: 613 CSLIELE-GTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQ 671
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ HSEKLA+AFGL+ + PGAT+R+ KNLR+C DCH S+V REI+VRD RF
Sbjct: 672 VSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRF 731
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC +YW
Sbjct: 732 HHFKDGLCSCNDYW 745
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 47/344 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+ LIR ++ GH +D++ L+ M + + P T++ K+C+ + D+S+G+ + A
Sbjct: 138 YNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
GF D +V N++I MY CG D+ +A
Sbjct: 198 -FKRGFMVDQFVLNSLIHMYASCG-------------------------------DVVAA 225
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ + +K +AW AM+ GYV+N +E +E F+ M D VTL+ V +AC +L
Sbjct: 226 HVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRL 285
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G W+ E AE G N+ +AL+DMY+KCG +D A R+F M R+V ++S+
Sbjct: 286 GDANLGQWIAEYAEEKGMLRSRNL--ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSA 343
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYG 307
MI G+ R A+ +F +M TE PN VT + VL+AC+ H ++
Sbjct: 344 MISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKD 403
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ + +VD + GC+++A+K E MPV N W AL+
Sbjct: 404 LPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWTALI 446
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 318/558 (56%), Gaps = 56/558 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+ F + +IRGY+ ++++++ LY M G+ +FT ALFKAC +
Sbjct: 41 IFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRS 100
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIH I G DL+V N++I MY KCG + S VF+ M RDV SW+ +I
Sbjct: 101 IEEGMQIHG-YIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIA 159
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A+A+ G +F E+ + + +P E+I
Sbjct: 160 AHASLGMWSECLSVFGEMSREG-------------SCRPEESI----------------- 189
Query: 188 LVGVISACAQLGVI-----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
LV V+SAC LG + + + I E NV+V ++LIDMY KCG I+
Sbjct: 190 LVSVLSACTHLGALDLGRCTHVTLLRNIRE-------MNVIVQTSLIDMYVKCGCIEKGL 242
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M ++N SYS MI G AMHGR A+Q+F DM++ KP+ V ++GVL+AC+H G
Sbjct: 243 SLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAG 302
Query: 303 L-----KCY-------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +C+ G+ P+ HY C+V L+GRAG L +AL+ + MP++PN VW L
Sbjct: 303 LVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGL 362
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+ H N EI +IAA L EL G+Y++LSN+YA A W+DV+++R + G
Sbjct: 363 LSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFT 422
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
+ PG+S ++ +R I++F + D++HP + + + + +L+ +GY P+ VL+DV +
Sbjct: 423 QTPGFSLVQVERK-IYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDE 481
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++ L HS+KLA+AF L+ TS GA +RI +NLR+C DCH + S + REI VRD
Sbjct: 482 EEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRD 541
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 542 RNRFHHFKDGTCSCRDYW 559
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 317/554 (57%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ + L+ + RGY + +L+ + G+ P +T +L KAC
Sbjct: 77 LFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKA 136
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+H I LG + ++YV T+I MY C + C+R+VFD++ E VV++ +I
Sbjct: 137 LEEGRQLHCLAIKLG-LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMIT 195
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA + ++P EA+ F +Q ++ VT
Sbjct: 196 GYA-------------------------------RGSRPNEALSLFRELQARNLKPTDVT 224
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V+S+CA LG + W+ E + +GF V V +ALIDMY+KCGS+DDA +F
Sbjct: 225 MLSVLSSCALLGALDLGKWMHEYVKKNGFNRF--VKVDTALIDMYAKCGSLDDAVCVFEN 282
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+ ++S+MI+ +A+HG A+ LF +M K T+P+ +TF+G+L ACSH GL
Sbjct: 283 MAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEG 342
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YGV P HY CMVDLLGRAG LEEA + + +P+ P +W LL AC
Sbjct: 343 FEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACG 402
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+ + +FEL+ G+YIILSN+ A AG W+DV+ VR+L+ G+ K PG
Sbjct: 403 SHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGC 462
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVSDEEKK 474
S +E + V+HEF +GD H ST++ QAL +L+ L+ GY PN V + D+ DEEK+
Sbjct: 463 SSVEVN-NVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKE 521
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA+ FGLL T PG T+R++KNLR+C DCH S + R+I++RD RF
Sbjct: 522 VTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRF 581
Query: 535 HHFQDGKCSCGNYW 548
HHF+DGKCSC +YW
Sbjct: 582 HHFKDGKCSCEDYW 595
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
M+ A LF+++P D V + M GY + P A F ++ ++G+ D T ++ A
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA ++ + +A G NV V LI+MY+ C +D A R+F + + V
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLS--ENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVV 188
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------L 303
+Y++MI G+A R + A+ LF ++ KP VT + VL++C+ +G +
Sbjct: 189 TYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYV 248
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
K G + ++D+ + G L++A+ + E M V + W A++ A IH
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR-DTQAWSAMIMAYAIH 301
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 33/246 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + A+I GY +++SL+ ++ + P T+ ++ +C +
Sbjct: 176 RRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALL 235
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ +H + + GF + V +I MY KCG
Sbjct: 236 GALDLGKWMH-EYVKKNGFNRFVKVDTALIDMYAKCG----------------------- 271
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ A +F + ++D AW+AM+ Y + +A+ F+ M+ AG E D
Sbjct: 272 --------SLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDE 323
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G++ AC+ G+++ + +G I + ++D+ + G +++AY
Sbjct: 324 ITFLGLLYACSHTGLVE-EGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFI 382
Query: 246 VGMKQR 251
VG+ R
Sbjct: 383 VGLPIR 388
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 339/619 (54%), Gaps = 80/619 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K +WT LI Y+ ++++ ++ +G P +T+S++ ACTE+
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTEL 267
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF---LGCSRKVFDEMPERDVVSW 122
V LG Q+H+ + +G F SD V ++ MY K + + KVF+ M + DV+SW
Sbjct: 268 GSVRLGLQLHSLALRMG-FASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISW 326
Query: 123 TELIVAYANNGDMESA-----GGLFNELPLKDKVAWT----------------------- 154
T LI Y +G E+ G + NE + + ++
Sbjct: 327 TALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVI 386
Query: 155 ------------AMVTGYVQNAKPREAIEYF---------------------ERMQYAGV 181
A+V+ Y ++ EA F R+ +
Sbjct: 387 KSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDM 446
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T +ISA A +G++ + + +GFG ++ V ++L+ MYS+CG ++DA
Sbjct: 447 GISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFG--SDRFVSNSLVSMYSRCGYLEDA 504
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R F +K RNV S++SMI G A HG A A+ LF DM+ T KPN VT+I VL+ACSHV
Sbjct: 505 CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + +G+ P +HYACMVDLL R+G ++EAL+ + +MP++ + VW
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKT 624
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC+ H N E+ +IAA ++ ELEP Y++LSN+YA AG+WD+V+R+R ++ L
Sbjct: 625 LLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K G SW+E + HEFRAGD +HP + +I L L+ ++ GY P+ VL+D+S
Sbjct: 685 NKETGLSWMEVE-NTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMS 743
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
DE K++ L+ HSEK+A+AFGL+TTS +RI KNLR+C DCH + S+ REI++R
Sbjct: 744 DELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILR 803
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D+ RFH +DG+CSCG YW
Sbjct: 804 DSNRFHRMKDGECSCGEYW 822
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 164/351 (46%), Gaps = 52/351 (14%)
Query: 6 RLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+ ++ ++ WTA+ G ++S+ L M G+ P ++TL A+ AC
Sbjct: 104 RNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC-- 161
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYV--KCGFLGCSRKVFDEMPERDVVSW 122
F +LY + + + K G G D+
Sbjct: 162 -------------------FPHELYCLVGGVVLGLVHKMGLWGT-----------DIAVG 191
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ LI A NGD+ SA +F+ L K V WT +++ YVQ EA+E F G E
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFE 251
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG---SID 239
D T+ +ISAC +LG ++ + +A GF ++ V L+DMY+K ++D
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGFA--SDACVSCGLVDMYAKSNIEQAMD 309
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M++ +V S++++I G+ G + + + LFG+M+ KPN +T+ +L AC
Sbjct: 310 YANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKAC 369
Query: 299 SHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKM 338
+++ G + + ++ A +V + +GC+EEA ++ ++
Sbjct: 370 ANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 36/239 (15%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTEL 125
D+ LG+ +H + + D V N+++ +Y +CG + +R VFD M RD+VSW
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSW--- 119
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
TAM + +N RE++ M +G+ +
Sbjct: 120 ----------------------------TAMASCLARNGAERESLLLIGEMLESGLLPNA 151
Query: 186 VTLVGVISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TL V AC +L + + + + +G ++ VGSALIDM ++ G + A +
Sbjct: 152 YTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWG--TDIAVGSALIDMLARNGDLASARK 209
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F G+ ++ V ++ +I + A A+++F D ++ +P+ T +++AC+ +G
Sbjct: 210 VFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELG 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+ VV ++L+ +YS+CG++ A +F GM+ R++ S+++M A +G ++ L G+M
Sbjct: 83 DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM 142
Query: 280 VKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY-------------ACMVDLLGRAG 326
+++ PN T V AC L C + ++D+L R G
Sbjct: 143 LESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNG 202
Query: 327 CLEEALKMVEKMPVEPNGGVWGALL-----GACQIHRNPEIAQIAANHLFE-LEPDKIGN 380
L A K+ + + +E VW L+ G C E +I + L + EPD+
Sbjct: 203 DLASARKVFDGL-IEKTVVVWTLLISRYVQGECA----EEAVEIFLDFLEDGFEPDR--- 254
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
Y + S I A ++ VR L++ L G++
Sbjct: 255 YTMSSMISACT----ELGSVRLGLQLHSLALRMGFA 286
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 324/558 (58%), Gaps = 30/558 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACT 63
R F+ +K ++ W +I GY G + ++ L+ PV FT +A+
Sbjct: 234 RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE------SPVHDVFTWTAMVSGYI 287
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ V +++ + + N M+ YV+ + ++++FD MP R+V +W
Sbjct: 288 QNRMVEEARELFDRMP-----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWN 342
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA G + A LF+++P +D V+W AM+ GY Q+ EA+ F M+ G
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL 402
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ + +S CA + ++ + + +G G VG+AL+ MY KCGSI++A
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKG---GYETGCFVGNALLLMYCKCGSIEEAN 459
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +++ S+++MI G++ HG A++ F M + KP+ T + VL+ACSH G
Sbjct: 460 DLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTG 519
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YGV P++ HYACMVDLLGRAG LEEA +++ MP EP+ +WG L
Sbjct: 520 LVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTL 579
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA ++H N E+A+ AA+ +F +EP+ G Y++LSN+YAS+G W DV ++R ++ G+K
Sbjct: 580 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 639
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E + H F GD HP EI L DL R++ GY VL+DV +
Sbjct: 640 KVPGYSWIE-IQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEE 698
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+R++ HSE+LA+A+G++ S G +R++KNLR+CEDCH + ++V GR I++RD
Sbjct: 699 EEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRD 758
Query: 531 NMRFHHFQDGKCSCGNYW 548
N RFHHF+DG CSCG+YW
Sbjct: 759 NNRFHHFKDGSCSCGDYW 776
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 181/418 (43%), Gaps = 77/418 (18%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSA------ 57
R++F+++ ++ W +I+GY+ +L + L+ M + + LS
Sbjct: 108 LARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167
Query: 58 ------LFKACTEVLDVSL---------GQQIHAQTILLGGFTS-DLYVGNTMIGMYVKC 101
+F E DVS ++ +L G + L N ++G +VK
Sbjct: 168 VDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKK 227
Query: 102 GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
+ +R+ FD M RDVVSW +I YA NG+++ A LF+E P+ D WTAMV+GY+
Sbjct: 228 KKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYI 287
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN 221
QN EA E F+RM E + V+ +++ Q ++ A + ++ P N
Sbjct: 288 QNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVM------PCRN 337
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + +I Y++CG I +A +F M +R+ S+++MI G++ G ++ A++LF M +
Sbjct: 338 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMER 397
Query: 282 TETKPNGVTFIGVLTACSHVGL-------------------------------KCYGVSP 310
+ N +F L+ C+ V KC +
Sbjct: 398 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 457
Query: 311 STD-----------HYACMVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGALLGAC 354
+ D + M+ R G EEAL+ E M E P+ A+L AC
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 25/337 (7%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W I Y+ G +++ ++ M R S + +A+ + L + + +
Sbjct: 62 WNVAISSYMRTGRCSEALRVFKRMPRWS----SVSYNAMISGYLRNGEFELARMLFDEMP 117
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
DL N MI YV+ LG +R++F+ MPERDV SW ++ YA NG ++ A
Sbjct: 118 -----ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDAR 172
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETDYVTLVGVISACAQL 198
+F+ +P K+ V+W A+++ YVQN+K EA F R +A V + C
Sbjct: 173 RVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWN----------CLLG 222
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G +K + E + + +VV + +I Y++ G ID+A ++F +VF++++
Sbjct: 223 GFVKKKK-IVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTA 281
Query: 259 MILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVSP--STDHY 315
M+ G+ + A +LF M + E N + V + + + V P + +
Sbjct: 282 MVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTW 341
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
M+ + G + EA + +KMP + + W A++
Sbjct: 342 NTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA 377
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
SD+ N I Y++ G + +VF MP VS+ +I Y NG+ E A LF+E+
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P +D V+W M+ GYV+N +A E FERM E D + ++S AQ G + A
Sbjct: 117 PERDLVSWNVMIKGYVRNRNLGKARELFERMP----ERDVCSWNTILSGYAQNGCVDDAR 172
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
V + P N V +AL+ Y + +++A +F + + S++ ++ GF
Sbjct: 173 RVFDRM------PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK 226
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----LKCYGVSPSTD--HYACM 318
+ A Q F M + V++ ++T + G + + SP D + M
Sbjct: 227 KKKIVEARQFFDSMKVRDV----VSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAM 282
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP 375
V + +EEA ++ ++MP E N W A+L E+A+ LF++ P
Sbjct: 283 VSGYIQNRMVEEARELFDRMP-ERNEVSWNAMLAGYVQGERVEMAK----ELFDVMP 334
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 322/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G K+++ L+ M + + P T+ + AC +
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+Q+H+ I GF S+L + N +I +Y KCG
Sbjct: 214 VELGRQVHSW-IDDHGFGSNLKIVNALIDLYSKCG------------------------- 247
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E+A GLF L KD V+W ++ GY +EA+ F+ M +G + VT
Sbjct: 248 ------QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 301
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V ++ ACA LG I W+ + N + ++LIDMY+KCG I+ A+++F
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
M +++ S+++MI GFAMHGRA+A LF M K +P+ +TF+G+L+ACSH G
Sbjct: 362 MLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLG 421
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M++ MP+EP+G +W +LL AC+
Sbjct: 422 RHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACR 481
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+A+ A +L ++EP+ G+Y++LSNIYA+AG WD+V++VR LL G+KK PG
Sbjct: 482 RHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGC 541
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 542 SSIEIDSEV-HEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEG 600
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 601 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFH 660
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC ++W
Sbjct: 661 HFRDGVCSCNDFW 673
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 201/372 (54%), Gaps = 19/372 (5%)
Query: 1 MDSFPRL--VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL 58
D FP VF ++ N +W ++RGY L ++ LY M G+ P S+T L
Sbjct: 13 FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
K+C + GQQIH + LG + DLYV ++I MY + G L + KVFD RD
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLG-YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VVS+T LI YA++G++ SA +F+E+P+KD V+W AM++GY + +EA+E F+ M
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V D T+V V+SACAQ ++ V + GFG +N+ + +ALID+YSKCG +
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFG--SNLKIVNALIDLYSKCGQV 249
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ A +F G+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC
Sbjct: 250 ETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPAC 309
Query: 299 SHVGL-------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
+H+G K V+ + ++D+ + G +E A ++ M + +
Sbjct: 310 AHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLS 368
Query: 346 VWGALLGACQIH 357
W A++ +H
Sbjct: 369 SWNAMIFGFAMH 380
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 302/489 (61%), Gaps = 15/489 (3%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
Q A+ + L T ++ N MI YV+CG L + K+F++ P + VV+WT +I Y
Sbjct: 84 QMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMK 143
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G + A LF ++P K+ V W AM+ GY++N + + ++ F M G++ + TL
Sbjct: 144 LGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSA 203
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ C++L ++ V ++ S ++ G++LI MY KCG ++D +++FV + +R
Sbjct: 204 LLGCSELSALQLGRQVHQLVCKSPL--CDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRR 261
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
+V ++++MI G+A HG A+ LF +M++ KP+ +TF+ VL AC+H G
Sbjct: 262 DVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYF 321
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
K YG+ DHY CMVDLLGRAG L EA+ ++EKMP +P+ V+G LLGAC+IH+N
Sbjct: 322 HSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKN 381
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
E+A+ A+ L L+P Y+ L+N+YA+ WD V+RVR+ +K + K PGYSW+E
Sbjct: 382 TEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIE 441
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
+ + H+FR+GD HP I L +L +++ GY P+L L+DV +E+K+++L+
Sbjct: 442 V-KSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLW 500
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+A+GL+ PG +R+ KNLR+C DCH + SQ+ REI+VRD RFHHF+D
Sbjct: 501 HSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKD 560
Query: 540 GKCSCGNYW 548
G CSC +YW
Sbjct: 561 GHCSCADYW 569
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 24/306 (7%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
+ + GM K G L ++++F ++PE D VS+ ++ Y N +ME A F ++P+KD
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTP 70
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W M+TG+ QN + +A + F M V VT +IS + G + A + E A
Sbjct: 71 SWNTMITGFAQNQQMDKARDLFLIMPTKNV----VTWNAMISGYVECGDLDSALKLFEKA 126
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P +VV +A+I Y K G I A R+F M ++N+ ++++MI G+ + RA
Sbjct: 127 ------PFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAED 180
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--------VSPSTDHYAC---MVD 320
++LF MV +PN T L CS + G SP D ++
Sbjct: 181 GVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKI 378
+ + G LE+ K+ ++P + W A++ H + A + + E ++PD I
Sbjct: 241 MYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWI 299
Query: 379 GNYIIL 384
+L
Sbjct: 300 TFVAVL 305
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 41/245 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ KN W A+I GYI +D + L+ +M GI P S TLS+ C+E+
Sbjct: 153 LFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSA 212
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H Q + D G ++I MY KCG L K+F ++P RDVV+W +I
Sbjct: 213 LQLGRQVH-QLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMIS 271
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA +G+ + A GLF+E+ K G++ D++T
Sbjct: 272 GYAQHGEGKKALGLFDEMIEK-------------------------------GMKPDWIT 300
Query: 188 LVGVISACAQLGV----IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
V V+ AC G +KY + + +G + + ++D+ + G + +A
Sbjct: 301 FVAVLMACNHAGFTDLGVKYFH-----SMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVD 355
Query: 244 IFVGM 248
+ M
Sbjct: 356 LIEKM 360
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 312/582 (53%), Gaps = 58/582 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+ LIR +D++ L+ SMR G P +T K+C+ D+ LG QIH+
Sbjct: 89 FNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSA 148
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN------ 131
L ++YV ++ I MY +CG + +VFD MP RDVVSW +I +A
Sbjct: 149 VAKLR-LDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDR 207
Query: 132 -----------NGDMESAGGL---------------------FNELPLKDKVAWTAMVTG 159
G M AG + F+ + K+ ++W AM+
Sbjct: 208 AIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAV 267
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI 219
Y N +A+E F M+ VE D +TL V+ C +L + EI + P
Sbjct: 268 YANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCP- 326
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N+++ +AL+DMY+ CG + DA IF M R+V S++S+I + HG A+ LF M
Sbjct: 327 -NLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKM 385
Query: 280 VKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGC 327
+ +P+ + F+ VL ACSH GL Y + P +HY CMVDLLGRAGC
Sbjct: 386 LGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGC 445
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNI 387
+ EA + M +EPN VWGALL AC+IH N +I +AA++LF L P++ G Y++LSN+
Sbjct: 446 INEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNM 505
Query: 388 YASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALG 446
YA AG W DV+ VR ++ G+KK PG S +E GD+ +H F GD HP S I L
Sbjct: 506 YARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQ--VHTFHIGDRCHPQSEMIYHKLD 563
Query: 447 DLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLR 506
+LL +++ GY P + + L+DV +E+K+ L HSEKLA+AF LL TSPG +R+ NLR
Sbjct: 564 ELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLR 623
Query: 507 ICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
C DCHL S + REIV++D R HH G CSCG+YW
Sbjct: 624 TCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF+ +++K W A++ Y ++ L+ M ++ + P S TL+ + C
Sbjct: 245 FVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCG 304
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
E+ S+G++IH + I +L + N ++ MY CG L +R++FD M RDV+SWT
Sbjct: 305 ELSAFSVGKRIH-EIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWT 363
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I AY +G REA++ FE+M G+E
Sbjct: 364 SIISAYGKHG-------------------------------HGREAVDLFEKMLGQGLEP 392
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + V V++AC+ G++ + + S + I + ++D+ + G I++AY
Sbjct: 393 DSIAFVAVLAACSHAGLLADGKHYFD-SMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD 451
Query: 244 IFVGM 248
M
Sbjct: 452 FITTM 456
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/541 (38%), Positives = 317/541 (58%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GYI+ K ++ L+ + + G TL+ KAC ++ + G+QIHA I
Sbjct: 1075 WNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAI 1134
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
GF SDL+V + ++ MY+KCG DM +AG
Sbjct: 1135 K-AGFDSDLHVNSGILDMYIKCG-------------------------------DMVNAG 1162
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+FN + D VAWT+M++G V N +A+ + RM+ + V D T +I A + +
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + A +++ VG++L+DMY+KCG+I+DAYR+F M RN+ +++M
Sbjct: 1223 ALEQGRQLH--ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAM 1280
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YG 307
++G A HG A A+ LF M +P+ V+FIG+L+ACSH GL YG
Sbjct: 1281 LVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYG 1340
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY+C+VD LGRAG ++EA K++E MP + + + ALLGAC+I + E + A
Sbjct: 1341 IEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVA 1400
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
LF LEP Y++LSNIYA+A WDDV+ R+++K +KK+PG+SW++ + ++H
Sbjct: 1401 ARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV-KNMLHL 1459
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F D +HP + I + +++ ++ DGY P+ VL DV DEEK+R L HSEKLA+A
Sbjct: 1460 FVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIA 1519
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+GL++T T+R++KNLR+C DCH + S+V REIV+RD RFHHF+DG CSCG+Y
Sbjct: 1520 YGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDY 1579
Query: 548 W 548
W
Sbjct: 1580 W 1580
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 186/400 (46%), Gaps = 57/400 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF +K+ + W ++I ++S++L+ + EG+ P FTL+++ +AC+
Sbjct: 957 FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Query: 64 EVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++D +++ +QIH + G +D +V T+I +Y K
Sbjct: 1017 SLIDGLNISRQIHVHALKTGNI-ADSFVATTLIDVYSK---------------------- 1053
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+G ME A LF D W AM+ GY+ ++A+E F + +G +
Sbjct: 1054 ---------SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+D +TL AC L ++ + A +GF +++ V S ++DMY KCG + +A
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD--SDLHVNSGILDMYIKCGDMVNAG 1162
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + + +++SMI G +G A++++ M ++ P+ TF ++ A S V
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222
Query: 303 LKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + +D + +VD+ + G +E+A ++ +KM V N +W A+L
Sbjct: 1223 ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAML 1281
Query: 352 GACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILS 385
H N E A +LF+ +EPD++ ILS
Sbjct: 1282 VGLAQHGNAE----EAVNLFKSMKSHGIEPDRVSFIGILS 1317
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 160/391 (40%), Gaps = 65/391 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQ-----GHLKDSISLYCSMRREGIGPVSFTLSA 57
S R VF+ ++ W A++ Y G+ ++ + L+ +R TL+
Sbjct: 673 SSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP 732
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ K C + + +H I +G D++V ++ +Y KCG + +R +FD M ER
Sbjct: 733 VLKLCLNSGCLWAAEGVHGYAIKIG-LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER 791
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLK---------------------DKVAWTA- 155
DVV W ++ Y G + A LF+E D+ W A
Sbjct: 792 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLAD 851
Query: 156 MVTGYVQ--------------NAKPRE---------AIEYFERMQYAGVETDYVTLVGVI 192
V Y N K E AIE F M ++ D VTL+ V+
Sbjct: 852 QVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVL 911
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+A A ++ V IA SG ++V V ++L++MYSK G A +F MK +
Sbjct: 912 AAVAGTDDLELGKQVHGIAVKSGLD--SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------------H 300
+ S++SMI A ++ LF D++ KP+ T VL ACS H
Sbjct: 970 LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIH 1029
Query: 301 VGLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
V G + ++D+ ++G +EEA
Sbjct: 1030 VHALKTGNIADSFVATTLIDVYSKSGKMEEA 1060
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF + + WT++I G + G+ ++ +Y MR+ + P +T + L KA + V
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+HA I L SD +VG +++ MY KCG + + ++F +M R++ W ++
Sbjct: 1223 ALEQGRQLHANVIKL-DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 1281
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V A +G+ E EA+ F+ M+ G+E D V
Sbjct: 1282 VGLAQHGNAE-------------------------------EAVNLFKSMKSHGIEPDRV 1310
Query: 187 TLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +G++SAC+ G+ A ++ + G P + S L+D + G + +A ++
Sbjct: 1311 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP--EIEHYSCLVDALGRAGLVQEADKVI 1368
Query: 246 VGMKQRNVFSYSSMILG 262
M + S + +LG
Sbjct: 1369 ETMPFKASASINRALLG 1385
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L + ++ LG+ HA+ I++ G D ++ N ++ MY KCG L +R+VFD PER
Sbjct: 627 LLRTAISTHNLLLGKCTHAR-IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER 685
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+V+W ++ AYA + D + +E + F ++
Sbjct: 686 DLVTWNAILGAYAASVD--------------------------SNDGNAQEGLHLFRLLR 719
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG--FGPINNVVVGSALIDMYSKC 235
+ T +TL V+ C G + W E G G +V V AL+++YSKC
Sbjct: 720 ASLGSTTRMTLAPVLKLCLNSGCL----WAAEGVHGYAIKIGLEWDVFVSGALVNIYSKC 775
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + DA +F M++R+V ++ M+ G+ G A QLF + ++ +P+ + +L
Sbjct: 776 GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 835
Query: 296 TACSHV 301
S V
Sbjct: 836 NGVSEV 841
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 37/286 (12%)
Query: 16 NP--FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
NP F W + + G +I + +M I + TL + A D+ LG+Q
Sbjct: 866 NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQ 925
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+H + G SD+ V N+++ MY K G +R+VF++M D++S
Sbjct: 926 VHGIAVK-SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLIS------------ 972
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
W +M++ Q++ E++ F + + G++ D+ TL V+
Sbjct: 973 -------------------WNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013
Query: 194 ACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
AC+ L I N +I G I + V + LID+YSK G +++A +F +
Sbjct: 1014 ACSSL--IDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLD 1071
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ +++M+ G+ + A++LF + K+ K + +T AC
Sbjct: 1072 LACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKAC 1117
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 222 VVVGSA--------LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM-----HGR 268
VV GSA L+ MYSKCGS+ A ++F +R++ ++++++ +A G
Sbjct: 648 VVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGN 707
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA------------ 316
A + LF + + +T VL C + G C + YA
Sbjct: 708 AQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG--CLWAAEGVHGYAIKIGLEWDVFVS 765
Query: 317 -CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HLFEL 373
+V++ + G + +A + + M E + +W +L G Q+ E Q+ + H L
Sbjct: 766 GALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 824
Query: 374 EPDKIGNYIILSNIYASAGMWDD 396
PD+ +IL+ + S WD+
Sbjct: 825 RPDEFSVQLILNGV--SEVNWDE 845
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 320/529 (60%), Gaps = 22/529 (4%)
Query: 37 ISLYCSMRREGIGPVSFTLSAL---FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
+ L+ ++ R + +F L+++ A LG +HA + G DLYV N
Sbjct: 112 LRLFPNLPRRNLHSFTFLLASISNHLDATDHRASSFLGSHVHALAVKAGA-AGDLYVRNA 170
Query: 94 MIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+ Y CG +G R VFDE+P RDVV+W ++ Y G + +A +F E+P++D+V+
Sbjct: 171 LTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVS 230
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W+ +V GYV+ + A+ F M GV + +V +SA AQ+G++++ +V E+ +
Sbjct: 231 WSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQ 290
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
+G P++ V VG+AL+DM+SKCG + A +F GM +R+VF++++MI G A HG A
Sbjct: 291 RTGM-PVS-VNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDA 348
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVD 320
++LF + P +TF+GVL ACS GL Y + P +HY CMVD
Sbjct: 349 VELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVD 408
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
LLGRAG + EA++++E M + P+ +WG +L AC+ H ++ N L ELEP G+
Sbjct: 409 LLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGH 468
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTE 440
Y++L++IYA A WD+V VR+L+ G K+ G+S +E +G +H+F GD+ H +S +
Sbjct: 469 YVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEA-QGNLHKFLVGDMDHKDSVQ 527
Query: 441 IQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATV 499
I L D+++R AD GY P++ SVL+D+ DEEK + HSE+LA+A+G + T G+ +
Sbjct: 528 IYNML-DMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPI 586
Query: 500 RIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
RI+KNL++C DCH F ++V REI+VRD RFHH ++GKCSC +YW
Sbjct: 587 RIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGKCSCLDYW 635
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/569 (38%), Positives = 330/569 (57%), Gaps = 66/569 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLY-----------CSMRREGIGPVSFT 54
R VF+++ +N WT++IRGY L G+ D++SL+ +M + +G VS
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVS-- 188
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS--RKVFD 112
+ AC+ V L + IH+ ++ GF + VGNT++ Y K G G + RK+FD
Sbjct: 189 ---VISACSRVAAKGLTESIHS-FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
++ + KD+V++ ++++ Y Q+ EA +
Sbjct: 245 QIVD-------------------------------KDRVSYNSIMSVYAQSGMSNEAFDV 273
Query: 173 FERMQYAGVET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F R+ V T + +TL V+ A + G ++ C + G ++V+VG+++IDM
Sbjct: 274 FRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK--CIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y KCG ++ A F MK +NV S+++MI G+ MHG A A++LF M+ + +PN +TF
Sbjct: 332 YCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 292 IGVLTACSHVGLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+ VL ACSH GL +GV P +HY CMVDLLGRAG L++A +++KM
Sbjct: 392 VSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMK 451
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
+EP+ +W +LL AC+IH+N E+A+I+ LFEL+P G Y++LS+IYA +G W DV R
Sbjct: 452 MEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVER 511
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR +K GL K PG+S LE + G +H F GD HP +I + L +L +L GY
Sbjct: 512 VRMTMKNRGLVKPPGFSLLELN-GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
N SV +DV +EEK+ L HSEKLA+AFG++ T PG+TV ++KNLR+C DCH + S
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+++ RE VVRD RFHHF+DG CSCG+YW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 182/406 (44%), Gaps = 58/406 (14%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V + F W ++I G +++ + SMR+ + P + KAC+ +LD+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+Q H Q + G + SD++V + +I MY CG L +RKVFDE+P+R++VSWT +I Y
Sbjct: 96 KQTHQQAFVFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
NG+ A LF +L ++ E A + D + +V V
Sbjct: 155 NGNALDAVSLFKDLLIE-------------------------ENDDDATMFLDSMGMVSV 189
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS--IDDAYRIFVGMK 249
ISAC+++ + GF V VG+ L+D Y+K G + A +IF +
Sbjct: 190 ISACSRVAAKGLTESIHSFVIKRGFD--RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-NGVTFIGVLTACSHVGL----K 304
++ SY+S++ +A G ++ A +F ++K + N +T VL A SH G K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK 307
Query: 305 C-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
C G+ ++D+ + G +E A ++M N W A++ +H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 358 RNPEIAQIAANHLFELEPDKIG-----NYIILSNIYAS---AGMWD 395
+ A EL P I NYI ++ A+ AG+ D
Sbjct: 367 GHAAKA-------LELFPAMIDSGVRPNYITFVSVLAACSHAGLHD 405
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 141 LFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LFN K D +W +++ ++ EA+ F M+ + + I AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + + FG +++ V SALI MYS CG ++DA ++F + +RN+ S++SM
Sbjct: 91 DIFSGKQTHQ--QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF------IGVLTACSHVGLKCYGVSPSTD 313
I G+ ++G A A+ LF D++ E + F + V++ACS V K
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAK--------- 199
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE- 372
G E V K + V LL A + E A +F+
Sbjct: 200 ------------GLTESIHSFVIKRGFDRGVSVGNTLLDAYA--KGGEGGVAVARKIFDQ 245
Query: 373 -LEPDKIGNYIILSNIYASAGMWDDVSRV-RRLLK 405
++ D++ I+S +YA +GM ++ V RRL+K
Sbjct: 246 IVDKDRVSYNSIMS-VYAQSGMSNEAFDVFRRLIK 279
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/553 (38%), Positives = 319/553 (57%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + +++ LW ALI G G ++ S++ +R+EG+G TL+A+ K+ +
Sbjct: 267 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 326
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
S +Q+HA +G F D +V N +I Y KC L + +VF+E D++
Sbjct: 327 ASATRQVHALAEKIG-FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDII------- 378
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A T+M+T Q AI+ F M G+E D
Sbjct: 379 ------------------------AVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +++ACA L + V F +++ G+AL+ Y+KCGSI+DA F
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R V S+S+MI G A HG A++LFG MV PN +T VL AC+H GL
Sbjct: 473 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 532
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+ + +HY+CM+DLLGRAG L++A+++V MP + N VWGALLGA +
Sbjct: 533 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 592
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++PE+ ++AA LF LEP+K G +++L+N YAS+GMW++V++VR+L+K + +KK P
Sbjct: 593 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 652
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + +H F GD +HP + EI L +L D + GY PN+ L+D+ EK+
Sbjct: 653 SWVEV-KDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKEL 711
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LA+AF LL+T PGA +R+ KNLRIC DCH+ S ++ REI++RD RFH
Sbjct: 712 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFH 771
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 772 HFRDGTCSCGDYW 784
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 46/362 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++FE++ + W ALI G +L GH +I L M+ G+ P F LS++ KAC
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 224
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+QIH I SD Y+G ++ MY K FL + KVFD M
Sbjct: 225 AFDLGRQIHGFMIKANA-DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH---------- 273
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+D + W A+++G + EA F ++ G+ +
Sbjct: 274 ---------------------RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 312
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ + A L V +AE GF I + V + LID Y KC + DA R+F
Sbjct: 313 TLAAVLKSTASLEAASATRQVHALAEKIGF--IFDAHVVNGLIDSYWKCSCLSDAIRVFE 370
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
++ + +SMI + AI+LF +M++ +P+ +L AC+ +
Sbjct: 371 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430
Query: 307 GVSPS---------TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +D +A +V + G +E+A +P E W A++G
Sbjct: 431 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLA 489
Query: 356 IH 357
H
Sbjct: 490 QH 491
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 148/325 (45%), Gaps = 50/325 (15%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
MR EG+ F L + K V D LG Q+HA + GF SD++V N ++ MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMA-MATGFGSDVFVANALVAMYGGFG 56
Query: 103 FLGCSRKVFDEM-PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
F+ +R+VFDE ER+ VS W +++ YV
Sbjct: 57 FMDDARRVFDEAGSERNAVS-------------------------------WNGLMSAYV 85
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN 221
+N + +AI+ F M ++G++ V++AC I V + G+ +
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE--KD 143
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V +AL+DMY K G +D A IF M +V S++++I G ++G H AI+L M
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 203
Query: 282 TETKPNGVTFIGVLTACS-----HVGLKCYG----VSPSTDHY--ACMVDLLGRAGCLEE 330
+ PN +L AC+ +G + +G + +D Y +VD+ + L++
Sbjct: 204 SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDD 263
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQ 355
A+K+ + M + +W AL+ C
Sbjct: 264 AMKVFDWMS-HRDLILWNALISGCS 287
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 42/303 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R+ E +N W L+ Y+ D+I ++ M GI P F S +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT ++ G+Q+HA + +G + D++ N ++ M
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMG-YEKDVFTANALVDM----------------------- 153
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
Y G ++ A +F ++P D V+W A+++G V N AIE +M+ +G
Sbjct: 154 --------YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCG 236
+ + L ++ ACA G + GF N +G L+DMY+K
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQI------HGFMIKANADSDDYIGVGLVDMYAKNH 259
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+DDA ++F M R++ ++++I G + GR A +F + K N T VL
Sbjct: 260 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319
Query: 297 ACS 299
+ +
Sbjct: 320 STA 322
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/486 (41%), Positives = 301/486 (61%), Gaps = 16/486 (3%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+ H + + D+ NT+I Y G + ++++FDEMPER++VSW ++
Sbjct: 77 VKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLS 136
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ G++E A GLF+E+P +D V+W +M+ Y Q KP EA+ F++M+ GV+ T
Sbjct: 137 GFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 196
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V ++SACA LG + + + N +VG+AL+DMY+KCG I A ++F
Sbjct: 197 VVSLLSACAHLGALDKGLHLHTYINDNRIEV--NSIVGTALVDMYAKCGKISLATQVFNA 254
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
M+ ++V +++++I G A+HG A QLF +M + +PN +TF+ +L+ACSH G
Sbjct: 255 MESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEG 314
Query: 303 ---LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
L C YG+ P +HY C++DLL RAG LEEA++++ MP+EPN GALLG C+
Sbjct: 315 QKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCR 374
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ ++ L L+P G YI+LSNIYA+A WDD +VR L+K+ G+ K PG
Sbjct: 375 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 434
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKK 474
S +E +G++H F AGD +HP S +I L ++ RL+ A GY + +VL D+ +E+K+
Sbjct: 435 SVIEL-KGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKE 493
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA+A+GLL +RI+KNLR+C DCH S+V GREI+VRD RF
Sbjct: 494 HALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRF 553
Query: 535 HHFQDG 540
HHF+DG
Sbjct: 554 HHFEDG 559
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S VF ++ K+ W +I G + GH+K++ L+ M+ + P T A+ AC
Sbjct: 246 SLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSAC 305
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ V GQ++ G + + +I + + G L + ++ MP
Sbjct: 306 SHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 313/556 (56%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
F ++ ++ W +LI GY G ++I ++ +R I P + T+ + AC + D
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G IH + LG F SD +V N +I MY KCG
Sbjct: 547 LDQGTCIHGLIVKLG-FESDCHVKNALIDMYAKCG------------------------- 580
Query: 128 AYANNGDMESAGGLFNELPL-KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ SA LFN+ KD+V W ++ Y+QN +EAI F +M+ + V
Sbjct: 581 ------SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Query: 187 TLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V V+ A A L + A C I G ++N +VG++LIDMY+KCG +D + ++
Sbjct: 635 TFVSVLPAAAYLAAFREGMAFHACIIQ----MGFLSNTLVGNSLIDMYAKCGQLDYSEKL 690
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M ++ S+++M+ G+A+HG AI LF M +++ + + V+F+ VL+AC H GL
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 750
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P +HYACMVDLLGRAG +E L ++ MPVEP+ GVWGALLG
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C++H N ++ ++A +HL +LEP ++++LS+IYA +G W D + R + GLKK
Sbjct: 811 SCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT 870
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E + +H FR GD +HP + LL++++ GY P+ VL +V +E+
Sbjct: 871 PGCSWVEL-KNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L +HSE+LA+ F LL T PG+T++I+KNLR+C DCH S++ R I+VRD
Sbjct: 930 KEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDAT 989
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 990 RFHHFEDGICSCNDYW 1005
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + LW ++IR Y +++ +Y M +G+ P +T + + KACT
Sbjct: 83 RSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGA 142
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L++ G H + I G D+++G ++ MY K
Sbjct: 143 LNLQEGVWFHGE-IDRRGLERDVFIGAGLVDMYSKM------------------------ 177
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
GD++ A +F+++P +D VAW AM+ G Q+ P EA+++F MQ GVE
Sbjct: 178 -------GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSS 230
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+L+ + +L I+ +C G F + V + LID+YSKCG +D A R+F
Sbjct: 231 VSLLNLFPGICKLSNIE----LCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
M ++ S+ +M+ G+A +G ++LF M + N V+ + A +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA 340
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 174/397 (43%), Gaps = 46/397 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q+ ++ W ++ GY G + + L+ M+ + + + F A E
Sbjct: 283 RRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAET 342
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ G++IH GC+ + + D++ T L
Sbjct: 343 IDLEKGKEIH-----------------------------GCA---LQQRIDSDILVATPL 370
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+V YA G+ E A LF L +D VAW+A++ VQ P EA+ F+ MQ ++ +
Sbjct: 371 MVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNR 430
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTL+ ++ ACA L ++K + + +++ G+AL+ MY+KCG A F
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMD--SDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M R++ +++S+I G+A G + AI +F + + P+ T +GV+ AC+
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G ++D+ + G L A + K + W ++ A
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
+ + + A I++ H LE + +S + A+A
Sbjct: 609 MQNGHAKEA-ISSFHQMRLENFHPNSVTFVSVLPAAA 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 168/365 (46%), Gaps = 53/365 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W A+I G +++ + SM+ G+ P S +L LF ++
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ L + IH + F+S V N +I +Y KCG + +R+VFD+M ++D VSW +
Sbjct: 244 SNIELCRSIHGY-VFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA+NG +V E +E F++M+ V +
Sbjct: 301 MAGYAHNG-------------------------CFV------EVLELFDKMKLGNVRINK 329
Query: 186 VTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
V+ V A A+ ++ + C + + ++++V + L+ MY+KCG + A +
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRID----SDILVATPLMVMYAKCGETEKAKQ 385
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G++ R++ ++S++I G A+ LF +M + KPN VT + +L AC+ + L
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 304 -------KCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL- 351
C+ V D +V + + G AL +M + W +L+
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
Query: 352 GACQI 356
G QI
Sbjct: 505 GYAQI 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S T LI Y+ + A +F+ P ++ W +M+ Y ++ + EA+E + M G
Sbjct: 65 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 124
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+E D T V+ AC G + V E G +V +G+ L+DMYSK G +
Sbjct: 125 LEPDKYTFTFVLKACT--GALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA--- 297
A +F M +R+V ++++MI G + A+ F M +P+ V+ + +
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICK 242
Query: 298 ------CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
C + + S+ ++DL + G ++ A ++ ++M V+ + WG ++
Sbjct: 243 LSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMM 301
Query: 352 G 352
Sbjct: 302 A 302
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 326/560 (58%), Gaps = 50/560 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHL--KDSISLYCSMRREGIG-PVSFTLSALF 59
++ R VF Q+ + N F W +LI+GY Q H K+ I L+ + G P SFTL+ +
Sbjct: 41 NYARSVFAQIPHPNIFSWNSLIKGYS-QIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVL 99
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
KAC V G Q+H+ +L GF S L+V +++ Y KC +G +RKVF+EM
Sbjct: 100 KACAIVTAFGEGLQVHSH-VLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEM----- 153
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
P+++ VAWTAM++G+ + EA+E F MQ A
Sbjct: 154 --------------------------PVRNLVAWTAMISGHARVGAVDEAMELFREMQKA 187
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G++ D +TLV V+SACA G + W+ E + + ++ + +AL+DMY+KCG I+
Sbjct: 188 GIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEK--YFVLTDLELSTALVDMYAKCGCIE 245
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A ++FV M ++ ++SSMI+GFA HG A AI F M++TE P+ VTF+ VL+AC+
Sbjct: 246 RAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACA 305
Query: 300 HVGLKC-----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
H GL +G+ PS +HY C VDLL R+G +EEA ++ M + PN W
Sbjct: 306 HGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWR 365
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LL C+ + + +I A +L ELEP NYI++SN+Y+S W+ +S +R+++K
Sbjct: 366 SLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKC 425
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+K PG S +E D GV+HEF GD +HP +++ + ++ R++ GY+P++ VL+ V
Sbjct: 426 IKPVPGCSSIEVD-GVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKV 484
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
DEEK+ L HSE+ A+A+GLL T +R++KNLR+C DCH + S++ REI+V
Sbjct: 485 VDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIV 544
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFH F G CSC ++W
Sbjct: 545 RDRVRFHKFIKGTCSCKDFW 564
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ-NAKPREAIEYFERMQYAGVET-DY 185
A + G++ A +F ++P + +W +++ GY Q + +E I F+++ G +
Sbjct: 33 ALSPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNS 92
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL V+ ACA + V GFG +++ V ++L++ Y KC I A ++F
Sbjct: 93 FTLAFVLKACAIVTAFGEGLQVHSHVLKDGFG--SSLFVQTSLVNFYGKCEEIGFARKVF 150
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M RN+ ++++MI G A G A++LF +M K +P+ +T + V++AC+
Sbjct: 151 EEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALD 210
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H ++ Y V + +VD+ + GC+E A ++ MPV+ + W +++
Sbjct: 211 IGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVK-DTTAWSSMIMGF 269
Query: 355 QIHRNPEIAQIAANHLFELE--PDKIGNYIILSNIYASAGMWDDVSRVRRL 403
H + A A + E E PD + +LS A G+ VSR RR
Sbjct: 270 AYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSAC-AHGGL---VSRGRRF 316
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/551 (40%), Positives = 329/551 (59%), Gaps = 26/551 (4%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+T+ I + +G +++L M G+ P + TLSA AC +++G+ +H
Sbjct: 95 FYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACG---GLAVGRALHGY 151
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTELIVAYANNGDME 136
+ L + + YV ++GMY + G +R +FD M P+ VVS T ++ YA G ++
Sbjct: 152 AVKLA-LSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLD 210
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A LF+ LP KD + W AM+ GY Q+ +P EA+ F RM +GVE D V++V +SA A
Sbjct: 211 DARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVA 270
Query: 197 QLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNV 253
QLG + W+ S + N VG+ALIDMY KCGS++DA +F +G R++
Sbjct: 271 QLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDI 330
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---------- 303
++++M+ G+AMHG + A+ FG + P +TFIGVL ACSH GL
Sbjct: 331 VAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRS 390
Query: 304 --KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP-VEPNGGVWGALLGACQIHRNP 360
+ YG+ P +HY CMVDLLGRAG +EEA ++V+ M +P+ +W +LL AC++H+N
Sbjct: 391 MAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNM 450
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ Q A+HL G Y++LSN+YA+AG W +V RVR +++ +G++K PG S +E
Sbjct: 451 ELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEV 510
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS---DEEKKRIL 477
R V+ EF AGD +HP + EI L ++ +A G+ P VL+D+ K++ L
Sbjct: 511 GRRVV-EFVAGDRSHPRAAEIYAKLEEVNGMARARGHVPRTELVLHDLDDDDTAAKEQAL 569
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSEKLALAFGL++T PG ++I+KNLR C DCH + S+V GR+IV RD RFHHF
Sbjct: 570 AVHSEKLALAFGLISTPPGTAIKIVKNLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHF 629
Query: 538 QDGKCSCGNYW 548
DG C+CG+YW
Sbjct: 630 VDGSCTCGDYW 640
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 116/298 (38%), Gaps = 71/298 (23%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + K+ W A++ GY G +++ L+ M R G+ P ++ A ++
Sbjct: 213 RSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQL 272
Query: 66 LDVSLGQQIHAQTILLGGFTSDL--YVGNTMIGMYVKCGFLGCSRKVFDEM--PERDVVS 121
G+ +H+ L VG +I MY KCG L + VF ++ +RD+V+
Sbjct: 273 GTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVA 332
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W ++ GY + REA+ F +++ G+
Sbjct: 333 WNAMV-------------------------------NGYAMHGHSREALAAFGQLRAQGL 361
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+T +GV++AC+ G++ + +AE G P V ++D+ + G +++
Sbjct: 362 WPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEP--KVEHYGCMVDLLGRAGRVEE 419
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A+ + M T TKP+ V + +L AC
Sbjct: 420 AFELVQSM---------------------------------TRTKPDAVMWASLLAAC 444
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/579 (36%), Positives = 329/579 (56%), Gaps = 71/579 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R VF+ + + LW A+I GY G + ++ L+ M + G+ P + T++++ AC
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
S + IH + LG F D YV N ++ MY + G
Sbjct: 413 CEAFSNKESIHGYAVKLG-FKEDRYVQNALMDMYSRMG---------------------- 449
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY------ 178
M+ + +F+ + ++D+V+W M+TGYV + + A+ MQ
Sbjct: 450 ---------KMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKD 500
Query: 179 -----------AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
+ + +TL+ V+ CA L I + A + +++ VGSA
Sbjct: 501 VKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLA--SDITVGSA 558
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT----- 282
L+DMY+KCG ++ + R+F M +NV +++ +I+ MHG+ A++LF +MV
Sbjct: 559 LVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGG 618
Query: 283 ETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEE 330
E KPN VTFI V ACSH GL +GV P++DHYAC+VDLLGRAG LEE
Sbjct: 619 EAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEE 678
Query: 331 ALKMVEKMPVEPNG-GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYA 389
A ++V MP E + G W +LLGAC+IH+N E+ ++AA +L LEP+ +Y++LSNIY+
Sbjct: 679 AYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 738
Query: 390 SAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLL 449
SAG+W+ VR+ ++ G+KK PG SW+E R +H+F AGD++HP S ++ L L
Sbjct: 739 SAGLWNKAMEVRKNMRQMGVKKEPGCSWIEF-RDEVHKFMAGDVSHPQSEQLHGFLETLS 797
Query: 450 DRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICE 509
++++ +GY P+ VL++V ++EK+ +L HSEKLA+AFG+L T PG T+R+ KNLR+C
Sbjct: 798 EKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 857
Query: 510 DCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
DCH S+++ REI+VRD RFHHF++G CSCG+YW
Sbjct: 858 DCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R +++IS Y M G P +F A+ KA + + D+ G+QIHA +
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G +S + V NT++ MY KCG +G KVFD + +RD
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRD--------------------- 158
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+V+W + + + K +A+E F MQ +E TLV V AC+ LG
Sbjct: 159 ----------QVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLG 208
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
V+ ++ S +AL+ MY+K G +DD+ +F R++ S+++M
Sbjct: 209 VMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTM 268
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
I F+ R A+ F MV + +GVT VL ACSH+
Sbjct: 269 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 310
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 61/386 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +FE ++ W +I + ++++ + M EG+ T++++ AC+ +
Sbjct: 251 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 310
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IHA + + +VG+ ++ MY C + R+VFD + R + W +
Sbjct: 311 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAM 370
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG E A LF E+ ++ AG+ +
Sbjct: 371 ISGYARNGLDEKALILFIEM------------------------------IKVAGLLPNT 400
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ V+ AC + A GF + V +AL+DMYS+ G +D + IF
Sbjct: 401 TTMASVMPACVHCEAFSNKESIHGYAVKLGFK--EDRYVQNALMDMYSRMGKMDISETIF 458
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-----------------KPNG 288
M+ R+ S+++MI G+ + GR A+ L +M + E KPN
Sbjct: 459 DSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNA 518
Query: 289 VTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
+T + VL C+ + G ++ + +VD+ + GCL + ++ +
Sbjct: 519 ITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 578
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIA 363
MP N W L+ AC +H E A
Sbjct: 579 MP-NKNVITWNVLIMACGMHGKGEEA 603
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV-- 65
VF+++ ++ W + I + ++ + +M+ E + SFTL ++ AC+ +
Sbjct: 150 VFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGV 209
Query: 66 -LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ LG+Q+H ++ +G + N ++ MY K G + S+
Sbjct: 210 MHGLRLGKQLHGYSLRVGD--QKTFTNNALMAMYAKLGRVDDSK---------------- 251
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LF +D V+W M++ + Q+ + EA+ +F M GVE D
Sbjct: 252 ---------------ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 296
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT+ V+ AC+ L + + + I N VGSAL+DMY C ++ R+
Sbjct: 297 GVTIASVLPACSHLERLDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRV 355
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSH 300
F + R + +++MI G+A +G A+ LF +M+K PN T V+ AC H
Sbjct: 356 FDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P + +W + ++ REAI + M +G D V+ A + L +K
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ A G+G ++V V + L++MY KCG I D ++F + R+ S++S I
Sbjct: 113 QIHAAAVKFGYGS-SSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+ A++ F M + + T + V ACS++G+
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGV 209
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/592 (36%), Positives = 335/592 (56%), Gaps = 58/592 (9%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF+Q+ Y++ + LI + GH ++ + M+ +G P ++ +AC+++L
Sbjct: 110 VVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLL 169
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ G+QIH + I++ + +V N M MY KCG + +R +FD M +++VVSW +I
Sbjct: 170 DLRHGKQIHGR-IVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMI 228
Query: 127 VAYANNGDMESAGGLFNE-----------------------------------LPLKDKV 151
Y G+ LFNE LP KD++
Sbjct: 229 SGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEI 288
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
WT M+ GY QN + +A F M V+ D T+ ++S+CA+L + + ++
Sbjct: 289 CWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHG----QVV 344
Query: 212 EGS--GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
G G N+++V SAL+DMY KCG DA IF M RNV ++++MILG+A +G+
Sbjct: 345 HGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQV 404
Query: 270 HAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----------GLKCYGVSPSTDHYACM 318
A+ L+ M + KP+ +TF+GVL+AC + + +G++P+ DHYACM
Sbjct: 405 LEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACM 464
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
+ LLGR+G +++A+ +++ MP EPN +W LL C + + A++AA+HLFEL+P
Sbjct: 465 ITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAELAASHLFELDPRNA 523
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPN 437
G YI+LSN+YA+ G W DV+ VR L+K KK YSW+E G++ +H F + D HP
Sbjct: 524 GPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNK--VHRFVSEDHYHPE 581
Query: 438 STEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG- 496
+I L L+ LQ GY P+ VL++V +EEK R + HSEKLALAF L+ G
Sbjct: 582 VGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGV 641
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
A +RI+KN+R+C+DCH+FM AS I R I++RD+ RFHHF GKCSC + W
Sbjct: 642 APIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C D +++ + L D ++ N ++ +Y K G L ++ VFD M +RDV S
Sbjct: 32 CARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYS 91
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W L+ AYA G +E+ +F+++P +D V++ ++ + N +A++ RMQ G
Sbjct: 92 WNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF 151
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + V + AC+QL +++ + + G N V +A+ DMY+KCG ID A
Sbjct: 152 QPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLG--ENTFVRNAMTDMYAKCGDIDKA 209
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+F GM +NV S++ MI G+ G + I LF +M + KP+ VT VL A
Sbjct: 210 RLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA 265
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 34/262 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ K+ WT +I GY G +D+ L+ M R + P S+T+S++ +C ++
Sbjct: 276 RNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKL 335
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ GQ +H + +++ G + + V + ++ MY KCG +R +F+ MP R+V++W +
Sbjct: 336 ASLYHGQVVHGKVVVM-GIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAM 394
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ YA NG + EA+ +ERMQ + D
Sbjct: 395 ILGYAQNGQV-------------------------------LEALTLYERMQQENFKPDN 423
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T VGV+SAC ++K + G P + + +I + + GS+D A +
Sbjct: 424 ITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHY--ACMITLLGRSGSVDKAVDLI 481
Query: 246 VGMKQRNVFSYSSMILGFAMHG 267
GM + S +L G
Sbjct: 482 QGMPHEPNYRIWSTLLSVCAKG 503
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/564 (38%), Positives = 330/564 (58%), Gaps = 56/564 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM------RREGIGPVSFTLSALF 59
R VF+++ ++ WT++IRGY L G+ D++SL+ + + + S L ++
Sbjct: 131 RKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS--RKVFDEMPER 117
AC+ V L + IH+ ++ GF + VGNT++ Y K G G + RK+FD++ +
Sbjct: 191 SACSRVPAKGLTESIHS-FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD- 248
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
KD+V++ ++++ Y Q+ EA E F R+
Sbjct: 249 ------------------------------KDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 178 YAGVET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
V T + +TL V+ A + G ++ C + G ++V+VG+++IDMY KCG
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGK--CIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A + F MK +NV S+++MI G+ MHG A A++LF M+ + +PN +TF+ VL
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 297 ACSHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL +GV P +HY CMVDLLGRAG L++A ++++M ++P+
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+W +LL AC+IH+N E+A+I+ LFEL+ G Y++LS+IYA AG W DV RVR ++
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K GL K PG+S LE + G +H F GD HP +I + L +L +L GY N SV
Sbjct: 517 KNRGLVKPPGFSLLELN-GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+DV +EEK+ L HSEKLA+AFG++ T PG+TV ++KNLR+C DCH + S+++ R
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDR 635
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
E VVRD RFHHF+DG CSCG+YW
Sbjct: 636 EFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 178/398 (44%), Gaps = 55/398 (13%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V + F W ++I G +++ + SMR+ + P + KAC+ + D+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+Q H Q + G + SD++V + +I MY CG L +RKVFDE+P+RD+VSWT +I Y
Sbjct: 96 KQTHQQAFVFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDL 154
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
NG+ A LF +L + + AM D + LV V
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMF-------------------------LDSMGLVSV 189
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS--IDDAYRIFVGMK 249
ISAC+++ + GF V VG+ L+D Y+K G + A +IF +
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFD--RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-NGVTFIGVLTACSHVGL----K 304
++ SY+S++ +A G ++ A ++F +VK + N +T VL A SH G K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 305 C-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
C G+ ++D+ + G +E A K ++M N W A++ +H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 358 RNPEIAQIAANHLFELEPDKIG-----NYIILSNIYAS 390
+ A EL P I NYI ++ A+
Sbjct: 367 GHAAKA-------LELFPAMIDSGVRPNYITFVSVLAA 397
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 141 LFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LFN K D +W +++ ++ EA+ F M+ + + I AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + + FG +++ V SALI MYS CG ++DA ++F + +R++ S++SM
Sbjct: 91 DIFSGKQTHQ--QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSM 148
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF------IGVLTACSHVGLKCYGVSPSTD 313
I G+ ++G A A+ LF D++ E + F + V++ACS V K
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK--------- 199
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE- 372
G E V K + V LL A + E A +F+
Sbjct: 200 ------------GLTESIHSFVIKRGFDRGVSVGNTLLDAYA--KGGEGGVAVARKIFDQ 245
Query: 373 -LEPDKIGNYIILSNIYASAGMWDDVSRV-RRLLK 405
++ D++ I+S +YA +GM ++ V RRL+K
Sbjct: 246 IVDKDRVSYNSIMS-VYAQSGMSNEAFEVFRRLVK 279
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 326/559 (58%), Gaps = 24/559 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+FE + + W A+I GY G ++ + M + P FT++++ AC +
Sbjct: 250 LFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLG 309
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTE 124
VS+G+Q+HA IL V N +I MY K G + +R V + M + +V+S+T
Sbjct: 310 MVSIGKQVHAY-ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTA 368
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GDM+ A +F+ + +D VAWTAM+ GY QN EA+E F M +G E +
Sbjct: 369 LLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPN 428
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T+ V+S CA L ++Y + C+ + V ++++ MY++ GS+ A R
Sbjct: 429 SYTVAAVLSVCASLACLEYGKQIHCKAIRSL---QEQSSSVSNSIVTMYARSGSLPWARR 485
Query: 244 IFVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + R +++SMI+ A HG A+ LF +M++ KP+ +TF+GVL+AC+HVG
Sbjct: 486 VFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVG 545
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+G+ P HYACMVDLL RAG EA + +++MPVEP+ WG+L
Sbjct: 546 FVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSL 605
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++H+N ++A++AA L ++P G Y LSN+Y++ G W+D +++ + K +K
Sbjct: 606 LSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVK 665
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K G+SW G+R +H F A D+ HP + + + D ++ G+ P+L+SVL+DV
Sbjct: 666 KETGFSWTHIGNR--VHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVD 723
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
DE K+ +L HSEKLA+AFGL++T T+RIMKNLR+C DCH + S+V REI++R
Sbjct: 724 DELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILR 783
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSC +YW
Sbjct: 784 DATRFHHFKDGFCSCKDYW 802
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 203/431 (47%), Gaps = 58/431 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++P WT ++ G G ++I ++ M +G+ P FTL+ + +C
Sbjct: 116 RAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAAT 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+++H+ + LG +S + V N+++ MY KCG +R VF+ MPER V SW +
Sbjct: 176 EARGVGRKVHSFVVKLG-LSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAM 234
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
+ A+ G M+ A LF +P + V+W A++ GY QN +A+ +F RM Y+ + D
Sbjct: 235 VSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPD 294
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD---- 240
T+ V+SACA LG++ V S I V +ALI MY+K GS+++
Sbjct: 295 EFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT--NALISMYAKSGSVENARGV 352
Query: 241 -----------------------------AYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
A +F M R+V ++++MI+G+ +G
Sbjct: 353 MQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDE 412
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVD 320
A++LF M+++ +PN T VL+ C+ + YG S+ +V
Sbjct: 413 AMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVT 472
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LE 374
+ R+G L A ++ +++ W +++ A H E A LFE ++
Sbjct: 473 MYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGE----DAVGLFEEMLRVGVK 528
Query: 375 PDKIGNYIILS 385
PD+I +LS
Sbjct: 529 PDRITFVGVLS 539
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC-----SRKVFD 112
L + C + G+ IHA+ + G + Y+ N ++ Y G +R++FD
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVK-AGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFD 87
Query: 113 EMP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
E+P +R+V +W L+ YA +G + A +F E+P +D V+WT MV G + + EAI
Sbjct: 88 EIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAI 147
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
+ F M G+ TL V+S+CA V G V V +++++
Sbjct: 148 KMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSC--VPVANSVLN 205
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
MY KCG + A +F M +R+V S+++M+ A GR A+ LF +M
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM 254
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 37/270 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ WTA+I GY GH +++ L+ M R G P S+T++A+ C +
Sbjct: 383 REMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASL 442
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
+ G+QIH + I S V N+++ MY + G L +R+VFD + R + V+WT
Sbjct: 443 ACLEYGKQIHCKAIRSLQEQSS-SVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTS 501
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+IVA A +G E A GLF E M GV+ D
Sbjct: 502 MIVALAQHGLGEDAVGLFEE-------------------------------MLRVGVKPD 530
Query: 185 YVTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T VGV+SAC +G + + ++ + G P + + ++D+ ++ G +A
Sbjct: 531 RITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVP--EMSHYACMVDLLARAGLFSEAQE 588
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
M + + ++ S++ +H A A
Sbjct: 589 FIQQMPVEPDAIAWGSLLSACRVHKNADLA 618
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
NV ++L+ +Y+K G + DA +F M +R+ S++ M++G GR AI++F DMV
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 281 KTETKPNGVTFIGVLTACSH-----VGLKCY------GVSPSTDHYACMVDLLGRAGCLE 329
P T VL++C+ VG K + G+S ++++ G+ G E
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 330 EALKMVEKMPVEPNGGVWGALLG 352
A + E+MP E + W A++
Sbjct: 215 TARAVFERMP-ERSVSSWNAMVS 236
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 316/557 (56%), Gaps = 47/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ + ++ W +I Y +++ ++ MR EG FT+S++ AC
Sbjct: 116 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACG 175
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
D +++H + + +LYVG ++ +Y KCG + + +VF+ M +
Sbjct: 176 ANCDALECKKLHCLS-MKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQD------- 227
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
K V W++MV GYVQ+ EA+ + R Q +E
Sbjct: 228 ------------------------KSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQ 263
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL VI AC+ L + + + SGFG +NV V S+ +DMY+KCGS+ ++Y
Sbjct: 264 NQFTLSSVICACSNLAALIEGKQMHAVIRKSGFG--SNVFVASSAVDMYAKCGSLRESYI 321
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
IF ++++N+ ++++I GFA H R + LF M + PN VTF +L+ C H GL
Sbjct: 322 IFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 381
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
YG+SP+ HY+CMVD+LGRAG L EA ++++ +P EP +WG+LL
Sbjct: 382 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLL 441
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C++ +N E+A++AA LFELEP+ GN+++LSNIYA+ W+++++ R+LL+ +KK
Sbjct: 442 ASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 501
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW++ + +H FR G+ +HP EI L +L+ L+ GY+P++ L+DV
Sbjct: 502 VRGQSWID-IKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIG 560
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K+ +LM HSEKLAL FGL+ G+TVRIMKNLRIC DCH FM AS R I+VRD
Sbjct: 561 KKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDA 620
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF DG CSCG +W
Sbjct: 621 NRFHHFSDGHCSCGEFW 637
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 182/440 (41%), Gaps = 89/440 (20%)
Query: 15 KNPFLWTA--LIRGYIL-----QGHLKDSISLYCSMRREGIGPVSFT----------LSA 57
KN +TA LIR IL L +IS++ S +E + P ++
Sbjct: 9 KNILGFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIE 68
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ + C V + H +T+ + D+ + N +I Y KCGF+
Sbjct: 69 ILQLCARNGAVMEAKACHGKTMRME-LQGDVTLSNVLINAYSKCGFV------------- 114
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
E A +F+ + + V+W M+ Y +N EA++ F M+
Sbjct: 115 ------------------ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-------NVVVGSALID 230
G + T+ V+SAC AN C+ E ++ N+ VG+AL+D
Sbjct: 157 NEGFKFSEFTISSVLSACG-------AN--CDALECKKLHCLSMKTSLDLNLYVGTALLD 207
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
+Y+KCG I+DA ++F M+ ++ ++SSM+ G+ A+ L+ + + N T
Sbjct: 208 LYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFT 267
Query: 291 FIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
V+ ACS H ++ G + + VD+ + G L E+ + ++
Sbjct: 268 LSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 327
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGM 393
E N +W ++ H P+ I LFE + P+++ +LS + G+
Sbjct: 328 -EKNIELWNTIISGFAKHARPKEVMI----LFEKMQQDGMHPNEVTFSSLLS-VCGHTGL 381
Query: 394 WDDVSRVRRLLKMT-GLKKN 412
++ R +L++ T GL N
Sbjct: 382 VEEGRRFFKLMRTTYGLSPN 401
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/553 (38%), Positives = 319/553 (57%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + +++ LW ALI G G ++ S++ +R+EG+G TL+A+ K+ +
Sbjct: 360 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 419
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
S +Q+HA +G F D +V N +I Y KC L + +VF+E D++
Sbjct: 420 ASATRQVHALAEKIG-FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDII------- 471
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A T+M+T Q AI+ F M G+E D
Sbjct: 472 ------------------------AVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L +++ACA L + V F +++ G+AL+ Y+KCGSI+DA F
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R V S+S+MI G A HG A++LFG MV PN +T VL AC+H GL
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+ + +HY+CM+DLLGRAG L++A+++V MP + N VWGALLGA +
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 685
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++PE+ ++AA LF LEP+K G +++L+N YAS+GMW++V++VR+L+K + +KK P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + +H F GD +HP + EI L +L D + GY PN+ L+D+ EK+
Sbjct: 746 SWVEV-KDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKEL 804
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LA+AF LL+T PGA +R+ KNLRIC DCH+ S ++ REI++RD RFH
Sbjct: 805 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFH 864
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 865 HFRDGTCSCGDYW 877
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 50/362 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ W++L+ Y G + +I + MR EG+ F L + K V
Sbjct: 57 RRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---V 113
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTE 124
D LG Q+HA + GF SD++V N ++ MY GF+ +R+VFDE ER+ VSW
Sbjct: 114 PDAQLGAQVHAMA-MATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 172
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ A YV+N + +AI+ F M ++G++
Sbjct: 173 LMSA-------------------------------YVKNDQCGDAIQVFGEMVWSGIQPT 201
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V++AC I V + G+ +V +AL+DMY K G +D A I
Sbjct: 202 EFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE--KDVFTANALVDMYVKMGRVDIASVI 259
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F M +V S++++I G ++G H AI+L M + PN +L AC+
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 319
Query: 300 HVGLKCYG----VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G + +G + +D Y +VD+ + L++A+K+ + M + +W AL+
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISG 378
Query: 354 CQ 355
C
Sbjct: 379 CS 380
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 46/362 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++FE++ + W ALI G +L GH +I L M+ G+ P F LS++ KAC
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+QIH I SD Y+G ++ MY K FL + KVFD M
Sbjct: 318 AFDLGRQIHGFMIKANA-DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH---------- 366
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+D + W A+++G + EA F ++ G+ +
Sbjct: 367 ---------------------RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 405
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ + A L V +AE GF I + V + LID Y KC + DA R+F
Sbjct: 406 TLAAVLKSTASLEAASATRQVHALAEKIGF--IFDAHVVNGLIDSYWKCSCLSDAIRVFE 463
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
++ + +SMI + AI+LF +M++ +P+ +L AC+ +
Sbjct: 464 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 307 GVSPS---------TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +D +A +V + G +E+A +P E W A++G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLA 582
Query: 356 IH 357
H
Sbjct: 583 QH 584
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 42/303 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R+ E +N W L+ Y+ D+I ++ M GI P F S +
Sbjct: 151 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT ++ G+Q+HA + +G + D++ N ++ M
Sbjct: 211 ACTGSRNIDAGRQVHAMVVRMG-YEKDVFTANALVDM----------------------- 246
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
Y G ++ A +F ++P D V+W A+++G V N AIE +M+ +G
Sbjct: 247 --------YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 298
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCG 236
+ + L ++ ACA G + GF N +G L+DMY+K
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQI------HGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+DDA ++F M R++ ++++I G + GR A +F + K N T VL
Sbjct: 353 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 412
Query: 297 ACS 299
+ +
Sbjct: 413 STA 415
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 157/347 (45%), Gaps = 71/347 (20%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G +HA +L GF + L N +I Y KC C+R+VFDE+P+ VSW+ L+ AY+
Sbjct: 23 GAHLHAN-LLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NNG PR AI+ F M+ GV + L
Sbjct: 80 NNG-------------------------------LPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 191 VISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-VG 247
V+ AQLG +A +A +GFG ++V V +AL+ MY G +DDA R+F
Sbjct: 109 VLKCVPDAQLGAQVHA-----MAMATGFG--SDVFVANALVAMYGGFGFMDDARRVFDEA 161
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+RN S++ ++ + + + AIQ+FG+MV + +P F V+ AC+
Sbjct: 162 GSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG 221
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G +VD+ + G ++ A + EKMP + + W AL+ C +
Sbjct: 222 RQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Query: 357 ----HRNPEIAQIAANHLFELEPDK-IGNYIILSNIY---ASAGMWD 395
HR E+ L +++ + N +LS+I A AG +D
Sbjct: 281 NGHDHRAIEL-------LLQMKSSGLVPNVFMLSSILKACAGAGAFD 320
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 312/541 (57%), Gaps = 36/541 (6%)
Query: 41 CSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
C + + P +L + AC + G+ +H + G F DL+VGN ++ MY K
Sbjct: 2 CKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSF-EDLFVGNALVDMYAK 60
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD----KVAWTAM 156
CG + + KVFD + E+DVVSW ++ Y+ G E A GLF ++ ++ V+W+A+
Sbjct: 61 CGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAV 120
Query: 157 VTGYVQNAKPREAIEYFERMQYAG-----------------VETDYVTLVGVISACAQLG 199
+ + Q E ++ F MQ+ V+ + T+ + ACA+L
Sbjct: 121 IAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLA 180
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + + F + V + LIDMY+K G ID A +F +KQ+N S++S+
Sbjct: 181 ALRLGRQIHAYILRNHFDSAF-LYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSL 239
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
+ G+ MHGR A+++F +M + +P+GVT + VL ACSH G+ K +G
Sbjct: 240 MTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFG 299
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
V P +HYACMVDLLGRAG L EA++++E M +EP+ VW ALL C+IH N E+ + AA
Sbjct: 300 VIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAA 359
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L EL + G+Y +LSNIYA+A W DV+RVR L+K +G++K PG SW++G +G
Sbjct: 360 KQLLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTT-T 418
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F D THP S +I + L L R++ GY P L+DV DEEK +L HSEKLALA
Sbjct: 419 FYVADKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALA 478
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+G+L ++PGA +RI KNLR+C DCH + S +I EI++RD+ RFHHF+ G CSC Y
Sbjct: 479 YGILISAPGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGY 538
Query: 548 W 548
W
Sbjct: 539 W 539
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 99/331 (29%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI------------------- 48
VF+++K K+ W A++ GY G +D++ L+ MR E I
Sbjct: 70 VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGL 129
Query: 49 ---------------------------------GPVSFTLSALFKACTEVLDVSLGQQIH 75
P FT+S AC + + LG+QIH
Sbjct: 130 GCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIH 189
Query: 76 AQTILLGGFTSD-LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
A IL F S LYV N +I MY K G + +R VFD + +++ VSWT L+
Sbjct: 190 A-YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM-------- 240
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
TGY + + +EA+E F+ M+ G++ D VTL+ V+ A
Sbjct: 241 -----------------------TGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYA 277
Query: 195 CAQLGV----IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK- 249
C+ G+ I++ N + FG I + ++D+ + G +++A + GM+
Sbjct: 278 CSHSGMIDQGIEFFN-----SMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQM 332
Query: 250 QRNVFSYSSMILGFAMHGRA----HAAIQLF 276
+ + + +++ G +H HAA QL
Sbjct: 333 EPSSIVWVALLSGCRIHANVELGEHAAKQLL 363
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ +K KN WT+L+ GY + G K+++ ++ MRR G+ P TL + AC+
Sbjct: 222 RFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACS 279
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 326/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G+ K+++ L+ M + + P T+ ++ AC +
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I GF S+L + N +I +Y+KCG
Sbjct: 251 IELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCG------------------------- 284
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 285 ------EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 338
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACA LG I+ W+ G N ++LIDMY+KCG I+ A ++F
Sbjct: 339 MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ R++ S+++MI GFAMHGRA+AA +F M K E +P+ +TF+G+L+ACSH G+
Sbjct: 399 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 458
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 459 RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 518
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
++ N E+ + A +L ++EP G+Y++LSNIYA+AG W++V+++R LL G+KK PG
Sbjct: 519 MYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 578
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 579 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 698 HFRDGVCSCNDYW 710
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 222/413 (53%), Gaps = 20/413 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W + RG+ L ++ LY M G+ P +T L K+C +
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG + DLYV ++I MYV+ G L +RKVFD+ RDVVS+T LI
Sbjct: 119 FREGQQIHGHVLKLG-YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 177
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G + SA +F+E+P+KD V+W AM++GY + +EA+E F+ M V D T
Sbjct: 178 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 237
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ I+ V + GFG +N+ + +ALID+Y KCG ++ A +F G
Sbjct: 238 MVSVVSACAQSASIELGRQVHSWIDDHGFG--SNLKIVNALIDLYIKCGEVETACGLFEG 295
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC+H+G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ H ++D+ + G +E A ++ + + + + W A++
Sbjct: 356 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGF 414
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+H N + E+EPD I ++ L + + +GM D + R +K
Sbjct: 415 AMHGRANAAFDIFSRMRKNEIEPDDI-TFVGLLSACSHSGMLDLGRHIFRSMK 466
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 312/554 (56%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ K+ WT+LI GY +++I L M + P FT ++L KA
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D +G+QIHA + + D+YVG+ ++ MY +CG
Sbjct: 166 ADSGIGRQIHALAVKCD-WHEDVYVGSALLDMYARCGM---------------------- 202
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F++L K+ V+W A+++G+ + A+ F M G E +
Sbjct: 203 ---------MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATH 253
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V S+ A+LG ++ WV A G+ L+DMY+K GS+ DA ++F
Sbjct: 254 FTYSSVFSSIARLGALEQGKWVH--AHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVF 311
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +++ ++++M+ FA +G A+ F +M K+ N VTF+ +LTACSH GL
Sbjct: 312 DRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVK 371
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y + P DH+ +V LLGRAG L AL + KMP+EP VWGALL AC
Sbjct: 372 EGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAAC 431
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N ++ Q AA+H+FEL+PD G ++L NIYAS G WD +RVRR++K TG+KK P
Sbjct: 432 RMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPA 491
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP + EI + G + +++ +GY P++ VL V D+E++
Sbjct: 492 CSWVEMENSV-HMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQERE 550
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLALAF L+ GAT+RIMKN+RIC DCH S+V GREIVVRD RF
Sbjct: 551 ANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRF 610
Query: 535 HHFQDGKCSCGNYW 548
HHF +G CSC +YW
Sbjct: 611 HHFSNGSCSCADYW 624
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P AC + ++ +++HA + F D ++ N++I +Y KCG + +
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAH-LASSRFAGDAFLDNSLIHLYCKCGSVLEA 105
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
RKVFDEM +D+VSWT LI YA N E A GL LP M+ G KP
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGL---LP--------GMLKGRF---KP- 150
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
+ ++ AG D G+ L V C+ E +V VGSA
Sbjct: 151 NGFTFASLLKAAGAHAD----SGIGRQIHALAV------KCDWHE--------DVYVGSA 192
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+DMY++CG +D A +F + +N S++++I GFA G A+ F +M++ +
Sbjct: 193 LLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEAT 252
Query: 288 GVTFIGVLTACSHVG 302
T+ V ++ + +G
Sbjct: 253 HFTYSSVFSSIARLG 267
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
I+ACAQ ++ A V S F + + ++LI +Y KCGS+ +A ++F M+++
Sbjct: 58 ITACAQSKNLEDARKVHAHLASSRFA--GDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----SHVGLKCY 306
++ S++S+I G+A + AI L M+K KPNG TF +L A S +G + +
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH 175
Query: 307 GVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
++ D + + ++D+ R G ++ A + +K+ + NG W AL+ +
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSK-NGVSWNALISGFARKGDG 234
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYAS--------AGMWDDVSRVRRLLKMTGLKKN 412
E A + + L + S++++S G W ++ KMT N
Sbjct: 235 ETALMTFAEM--LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN 292
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/606 (34%), Positives = 333/606 (54%), Gaps = 72/606 (11%)
Query: 4 FPRLVFEQVKYKNPFLW---TALIRGYILQGHLKDSISLY-----CSMRREGI----GPV 51
+PRL+ K+ NP L ++ G+ + I+LY C + R P
Sbjct: 55 YPRLL-SSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPS 113
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
+++ +A T + +++ + GG D+++G ++ MY K G L +R+VF
Sbjct: 114 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVF 173
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY----------- 160
D+MP+RDVV+W +I + + D A +F+++ +D V+W M+ GY
Sbjct: 174 DKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLE 233
Query: 161 -------------------VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI 201
+QN +EAI F +M+ + VT V V+ A A L
Sbjct: 234 LFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 293
Query: 202 KYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
+ EG F G ++N +VG++LIDMY+KCG +D + ++F M ++
Sbjct: 294 R---------EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 344
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S+++M+ G+A+HG AI LF M +++ + + V+F+ VL+AC H GL
Sbjct: 345 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 404
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
Y + P +HYACMVDLLGRAG +E L ++ MPVEP+ GVWGALLG+C++H N ++
Sbjct: 405 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 464
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
++A +HL +LEP ++++LS+IYA +G W D + R + GLKK PG SW+E +
Sbjct: 465 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL-K 523
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
+H FR GD +HP + LL++++ GY P+ VL +V +E+K+ L +HSE
Sbjct: 524 NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSE 583
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
+LA+ F LL T PG+T++I+KNLR+C DCH S++ R I+VRD RFHHF+DG C
Sbjct: 584 RLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGIC 643
Query: 543 SCGNYW 548
SC +YW
Sbjct: 644 SCNDYW 649
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 327/557 (58%), Gaps = 51/557 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N +L+TALI G++ G+ D+I LY M + I P ++ ++++ KAC L
Sbjct: 86 IFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLA 145
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE----RDVVSWT 123
+ G+++H++ + L G +S+ V ++ +Y KCG LG +R+VF+EMPE +D V WT
Sbjct: 146 LREGREVHSRALKL-GLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWT 204
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
AM+ G+V+N + A+E F MQ V
Sbjct: 205 -------------------------------AMIDGFVRNEEMNRALEAFRGMQGENVRP 233
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T+V V+SAC+QLG ++ WV F N+ VG+ALI+MYS+CGSID+A
Sbjct: 234 NEFTIVCVLSACSQLGALEIGRWVHSYMR--KFEIELNLFVGNALINMYSRCGSIDEAQT 291
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F MK R+V +Y++MI G +M+G++ AI+LF M+ +P VTF+GVL ACSH GL
Sbjct: 292 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 351
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YGV P +HY CMVDLLGR G LEEA ++ M + P+ + G LL
Sbjct: 352 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 411
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++H+N E+ + A L + G Y++LS++YAS+G W + ++VR +K G++K
Sbjct: 412 SACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 471
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG S +E + IHEF GDL HP I + L +L L+ +GY P VL D+ D
Sbjct: 472 EPGCSSIEVN-NEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDG 530
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ L HSE+LA+ +GL++T P +R+MKNLR+C DCH + +++ R++VVRD
Sbjct: 531 EKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDR 590
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH+F++G CSCG+YW
Sbjct: 591 NRFHYFENGACSCGDYW 607
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+ SKC +ID A RIF NV+ Y+++I GF G AIQL+ M+ P+
Sbjct: 70 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 129
Query: 288 GVTFIGVLTAC-SHVGLK----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+L AC S + L+ G+S + +++L G+ G L +A ++ E
Sbjct: 130 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 189
Query: 337 KMP---VEPNGGVWGALL 351
+MP V + W A++
Sbjct: 190 EMPEDVVAKDTVCWTAMI 207
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 324/559 (57%), Gaps = 58/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKACTE 64
R VF ++ N WTAL+ GY+ +G + + L+C M EGI P T S++ KAC
Sbjct: 313 REVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372
Query: 65 VLDVSLGQQIHAQTILLGGFTSDL-YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D G+QIH + +DL VGN ++ MY
Sbjct: 373 LGDQDSGRQIHTHCV--KSNLADLNVVGNALVSMY------------------------- 405
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY-FERMQYAGVE 182
A +G +E A F++L K+ V+++ + G + + +Y ERM+ G+
Sbjct: 406 ------AESGSIEEARHAFDQLYEKNMVSFSGNLDG---DGRSNTYQDYQIERMEL-GIS 455
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T T +ISA A +G++ + ++ +GFG ++ +G++L+ MYS+CG + DA
Sbjct: 456 T--FTFGSLISAAASVGMLTKGQRLHALSLKAGFG--SDRAIGNSLVSMYSRCGYLVDAC 511
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M NV S++SMI G A HG A A++LF DM+ KPN VT+I VL+ACSH G
Sbjct: 512 QVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAG 571
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L K +G+ P +HYACMVDLLGR+G +E+AL + +MP + + VW L
Sbjct: 572 LVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTL 631
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+ H N +I +IAANH+ +LEP Y++LSN+YA AG+WD V+R+R L++ L
Sbjct: 632 LGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLM 691
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G SW+ D IHEFRAGD +HP + EI L L+ ++ GY P+ VL+D+SD
Sbjct: 692 KEKGLSWMHVD-NTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSD 750
Query: 471 EEKKRILMTHSEKLALAFGLLT-TSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
E K+ L+ HSEK+A+AFGL++ TS +RI KNLR+C DCH + S+ GREI++R
Sbjct: 751 ELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILR 810
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D+ RFH +DG+CSCG YW
Sbjct: 811 DSNRFHRMKDGECSCGEYW 829
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 78/393 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + + +WT LI Y G+ +++ L+ M G P +TLS++ ACTE+
Sbjct: 209 RRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTEL 268
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LGQQ+H+ + LG SD V ++ MY K
Sbjct: 269 GSFRLGQQLHSLALRLG-LESDSCVSCGLVDMYAKS------------------------ 303
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGVETD 184
N + +A +FN +P + +AWTA+++GYVQ ++ + + F +M G+ +
Sbjct: 304 ----HNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPN 359
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
++T ++ ACA LG + S +N VVG+AL+ MY++ GSI++A
Sbjct: 360 HITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLN--VVGNALVSMYAESGSIEEARHA 417
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHA-------------AIQLFGDMVKTET------- 284
F + ++N+ S+S + G GR++ + FG ++
Sbjct: 418 FDQLYEKNMVSFSGNLDG---DGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTK 474
Query: 285 ----------------KPNGVTFIGVLTACSHVGLKCYGVSPSTDH----YACMVDLLGR 324
+ G + + + + C ++ C DH + M+ L +
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534
Query: 325 AGCLEEALKMVEKM---PVEPNGGVWGALLGAC 354
G AL++ M V+PN + A+L AC
Sbjct: 535 HGYAARALELFHDMIAAGVKPNDVTYIAVLSAC 567
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 42/305 (13%)
Query: 6 RLVFE--QVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ V ++ WTA+ G +++ L+ EG+ P +FTL A +AC
Sbjct: 104 RSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC- 162
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLY--VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
F S+L+ G ++G+ K GF G DV
Sbjct: 163 --------------------FASELFHLAGGAVLGLVFKLGFWGT-----------DVSV 191
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
LI +A NGD+ + +F+ L + V WT ++T Y Q+ EA+E F M G
Sbjct: 192 GCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGF 251
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSI 238
+ D TL ++SAC +LG + + +A G + V G L+DMY+K S+
Sbjct: 252 QPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCG--LVDMYAKSHNGQSL 309
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+A +F M + NV ++++++ G+ G + + + LF M+ +PN +T+ +L A
Sbjct: 310 HNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKA 369
Query: 298 CSHVG 302
C+++G
Sbjct: 370 CANLG 374
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 59/307 (19%)
Query: 67 DVSLGQQIHAQTILLGGF-TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ LG+ + + G +D V N+++ +Y KC + +R VFD MP
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMP---------- 111
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ L+D V+WTAM + +N EA+ F G+ +
Sbjct: 112 -------------------VGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNA 152
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI-------NNVVVGSALIDMYSKCGSI 238
TL AC +A+ + +A G+ G + +V VG ALIDM++K G +
Sbjct: 153 FTLCAATQAC-------FASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDL 205
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
R+F G+ +R V ++ +I +A G + A++LF DM++ +P+ T +L+AC
Sbjct: 206 VAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSAC 265
Query: 299 SHVG-------LKCYGVSPSTDHYAC----MVDLLGRA---GCLEEALKMVEKMPVEPNG 344
+ +G L + + +C +VD+ ++ L A ++ +MP + N
Sbjct: 266 TELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP-KHNV 324
Query: 345 GVWGALL 351
W ALL
Sbjct: 325 MAWTALL 331
>gi|255547321|ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546322|gb|EEF47824.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 399
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/298 (64%), Positives = 243/298 (81%), Gaps = 2/298 (0%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD +PR +F QVK+ NPFL++A+IRGY ++G L +S+ +Y MR E +GPVSFT SA+FK
Sbjct: 89 MDPYPRSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFSAIFK 148
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC V D+ LG+Q+HAQ+IL+GGF SDL+V NT+I MY+KCG L C RKVF+ MPE+DV+
Sbjct: 149 ACGAVGDLHLGRQMHAQSILIGGFCSDLFVSNTLIDMYIKCGVLECGRKVFNAMPEKDVI 208
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWTE+IVAYA +GDM+SA LF+ LP+KD VAWTAMVTG+ QNAKPREAI++FERMQ AG
Sbjct: 209 SWTEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPREAIQFFERMQDAG 268
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSID 239
+ TD VTLVGVISAC+QLG +YA+W+ +IAE G+ +VV+GSALIDMYSKCGS+D
Sbjct: 269 IGTDEVTLVGVISACSQLGAAEYADWIRDIAEKQYGYDWGYSVVLGSALIDMYSKCGSVD 328
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
AY++F G+K RNVFSYSSMI+GFAMHGRA AAI+LF +M+KT T PN V F+ L A
Sbjct: 329 CAYKVFKGLKDRNVFSYSSMIMGFAMHGRADAAIKLFHEMIKTGTAPNKV-FLADLEA 385
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+FN++ + ++A++ GY E+++ + M+ V T + AC +G
Sbjct: 95 SIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFSAIFKACGAVG 154
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ + + G G +++ V + LIDMY KCG ++ ++F M +++V S++ M
Sbjct: 155 DLHLGRQMHAQSILIG-GFCSDLFVSNTLIDMYIKCGVLECGRKVFNAMPEKDVISWTEM 213
Query: 260 IL-------------------------------GFAMHGRAHAAIQLFGDMVKTETKPNG 288
I+ GF+ + + AIQ F M +
Sbjct: 214 IVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPREAIQFFERMQDAGIGTDE 273
Query: 289 VTFIGVLTACSHVGLKCYG 307
VT +GV++ACS +G Y
Sbjct: 274 VTLVGVISACSQLGAAEYA 292
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 337/566 (59%), Gaps = 60/566 (10%)
Query: 3 SFPRLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFK 60
S+ VF ++ K N F+W LIRGY G+ ++SLY MR G + P + T L K
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLK 129
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A ++ DV LG+ IH+ ++ GF S +YV N+++ +Y CG
Sbjct: 130 AVGKMADVRLGETIHS-VVIRSGFGSLIYVQNSLLHLYANCG------------------ 170
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
D+ SA +F+++P KD VAW +++ G+ +N KP EA+ + M G
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKG 217
Query: 181 VETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
++ D T+V ++SACA++G + ++ ++ ++ G N+ + L+D+Y++CG
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV------GLTRNLHSSNVLLDLYARCG 271
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVL 295
+++A +F M +N S++S+I+G A++G AI+LF +M E P +TF+G+L
Sbjct: 272 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGIL 331
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
ACSH G+ + Y + P +H+ CMVDLL RAG +++A + + KMP++PN
Sbjct: 332 YACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPN 391
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+W LLGAC +H + ++A++A + +LEP+ G+Y++LSN+YAS W DV ++R+
Sbjct: 392 VVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQ 451
Query: 404 LKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
+ G++K PG+S +E G+R +HEF GD +HP + I L ++ DRL+ +GY P +
Sbjct: 452 MLRDGVRKVPGHSLVEVGNR--VHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQIS 509
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
+V DV +EEK+ L+ HSEK+A+AF L++T +R++KNL++C DCHL + S+V
Sbjct: 510 NVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVY 569
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
REIVVRD RFHHF++G CSC +YW
Sbjct: 570 NREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/555 (38%), Positives = 322/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +++ L ALI G G +++SL+ +R+EG+G TL+A+ K+ +
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL 417
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S +Q+HA + +G F D +V N +I Y KC L + +VF+E D++
Sbjct: 418 EAASTTRQVHALAVKIG-FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDII----- 471
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A T+M+T Q AI+ F M G+E D
Sbjct: 472 --------------------------ACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L +++ACA L + V F +++ G+AL+ Y+KCGSI+DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R V S+S+MI G A HG A++LFG MV PN +T VL AC+H GL
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+ + +HY+CM+DLLGRAG L++A+++V MP + N +WGALLGA
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++H++PE+ ++AA LF LEP+K G +++L+N YASAGMW++V++VR+L+K + +KK P
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEP 743
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F GD +HP + EI L +L D + G+ PN+ L+D+ EK
Sbjct: 744 AMSWIEV-KDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEK 802
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSE+LA+AF LL+T PGA +R+ KNLRIC DCH+ S+++ REI++RD R
Sbjct: 803 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINR 862
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 863 FHHFRDGTCSCGDYW 877
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 186/412 (45%), Gaps = 56/412 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+++ W++L+ Y G + +I + MR EG+ F L + K V
Sbjct: 57 RRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---V 113
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D LG Q+HA + GF SD++V N ++ MY GF+ +R+VF
Sbjct: 114 PDARLGAQVHAMA-MATGFGSDVFVANALVAMYGGFGFMDDARRVF-------------- 158
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
N D E ++ V+W +++ YV+N + +AI+ F M ++G++
Sbjct: 159 -----NEADSE-----------RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V++AC I+ V + G+ +V +AL+DMY K G +D A IF
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD--KDVFTANALVDMYMKMGRVDIASVIF 260
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
M +V S++++I G ++G H AI+L M + PN T +L ACS
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 301 VGLKCYG----VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+G + +G + +D Y +VD+ + L++A K+ + M + + AL+ C
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIG-NYIILSNIYASAGMWDDVSRVRRL 403
H R+ E A + +EL + +G N L+ + S + S R++
Sbjct: 380 S-HGGRHDE----ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 46/362 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++FE++ + W ALI G +L GH +I L M+ G+ P FTLS++ KAC+
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+QIH I SD Y+G ++ MY K FL +RKVFD M R
Sbjct: 318 AFDLGRQIHGFMIKANA-DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR--------- 367
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D + A+++G + EA+ F ++ G+ +
Sbjct: 368 ----------------------DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ + A L V +A GF I + V + LID Y KC + DA R+F
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVKIGF--IFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
++ + +SMI + AI+LF +M++ +P+ +L AC+ +
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 307 GVSPS---------TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +D +A +V + G +E+A +P E W A++G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLA 582
Query: 356 IH 357
H
Sbjct: 583 QH 584
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 42/301 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R+ E +N W L+ Y+ D+I ++ M GI P F S +
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT ++ G+Q+HA + +G + D++ N ++ MY+K
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMG-YDKDVFTANALVDMYMKM------------------- 250
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
G ++ A +F ++P D V+W A+++G V N AIE +M+Y+G
Sbjct: 251 ------------GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCG 236
+ + TL ++ AC+ G + GF N +G L+DMY+K
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQI------HGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+DDA ++F M R++ +++I G + GR A+ LF ++ K N T VL
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 297 A 297
+
Sbjct: 413 S 413
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 137/310 (44%), Gaps = 60/310 (19%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G +HA + G S N +I Y KC C+R+ FDE+P+ VSW+ L+ AY+
Sbjct: 23 GAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYS 79
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NNG PR AI+ F M+ GV + L
Sbjct: 80 NNG-------------------------------LPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 191 VISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-VG 247
V+ A+LG +A +A +GFG ++V V +AL+ MY G +DDA R+F
Sbjct: 109 VLKCVPDARLGAQVHA-----MAMATGFG--SDVFVANALVAMYGGFGFMDDARRVFNEA 161
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+RN S++ ++ + + + AIQ+FG+MV + +P F V+ AC+
Sbjct: 162 DSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG 221
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G +VD+ + G ++ A + EKMP + + W AL+ C +
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Query: 357 ----HRNPEI 362
HR E+
Sbjct: 281 NGHDHRAIEL 290
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 320/564 (56%), Gaps = 22/564 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ ++ W +I Y G L ++ L+ M+ + P L + AC
Sbjct: 166 NYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSAC 225
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + I+ ++ D ++ ++ MY G + + + F +M R++
Sbjct: 226 GRTGNMRYNRAIY-DFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVS 284
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T ++ Y+ G ++ A +F++ +KD V WT M++ Y ++ P+EA+ FE M +G++
Sbjct: 285 TAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIK 344
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D VT++ VISAC LG + A WV +G + + + +ALI+MY+KCG +D A
Sbjct: 345 PDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESV--LPIDNALINMYAKCGGLDAAR 402
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M RNV S+SSMI FAMHG A ++ LF M + +PN VTF+GVL CSH G
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L Y ++P +HY CMVDL GRA L EAL+++E MP+ PN +WG+L
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
+ AC++H E+ ++AA + +LEPD G +++SNIYA WD V +R +++ +
Sbjct: 523 MSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVF 582
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G S ++ + G HEF GD H S EI L +++ +L+ GY P+ SVL DV +
Sbjct: 583 KEKGLSRIDLN-GKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEE 641
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPG------ATVRIMKNLRICEDCHLFMCGASQVIGR 524
EEKK +++ HSEKLAL FGL+ +RI+KNLR+CEDCH F S+V
Sbjct: 642 EEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYEL 701
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI+VRD RFH ++DG CSC +YW
Sbjct: 702 EIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 161/354 (45%), Gaps = 23/354 (6%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
++ +L+R G + +I Y +R G + + KA ++V + G ++H
Sbjct: 81 VFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFA 140
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
+ SD +V ++ MY CG + +R VFDEM +RDVV+W +I Y G ++ A
Sbjct: 141 FKIATL-SDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199
Query: 139 GGLFNELP----LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
LF E+ + D++ +V+ + R ++ + V D L +++
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A G + A E + N+ V +A++ YSK G +DDA IF + +++
Sbjct: 260 YAGAGCMDMA------MEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLV 313
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------L 303
+++MI +A A+++F +M + KP+ VT + V++AC ++G
Sbjct: 314 CWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G+ ++++ + G L+ A + EKMP N W +++ A +H
Sbjct: 374 HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMH 426
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/555 (38%), Positives = 322/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +++ L ALI G G +++SL+ +R+EG+G TL+A+ K+ +
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL 417
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S +Q+HA + +G F D +V N +I Y KC L + +VF+E D++
Sbjct: 418 EAASTTRQVHALAVKIG-FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDII----- 471
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A T+M+T Q AI+ F M G+E D
Sbjct: 472 --------------------------ACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L +++ACA L + V F +++ G+AL+ Y+KCGSI+DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R V S+S+MI G A HG A++LFG MV PN +T VL AC+H GL
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+ + +HY+CM+DLLGRAG L++A+++V MP + N +WGALLGA
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++H++PE+ ++AA LF LEP+K G +++L+N YASAGMW++V++VR+L+K + +KK P
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEP 743
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F GD +HP + EI L +L D + G+ PN+ L+D+ EK
Sbjct: 744 AMSWIEV-KDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEK 802
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSE+LA+AF LL+T PGA +R+ KNLRIC DCH+ S+++ REI++RD R
Sbjct: 803 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINR 862
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 863 FHHFRDGTCSCGDYW 877
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 187/412 (45%), Gaps = 56/412 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ W++L+ Y G + +I + MR EG+ F L + K V
Sbjct: 57 RRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---V 113
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D LG Q+HA + GF SD++V N ++ MY GF+ +R+VF
Sbjct: 114 PDARLGAQVHAMA-MATGFGSDVFVANALVAMYGGFGFMDDARRVF-------------- 158
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
N D E ++ V+W +++ YV+N + +AI+ F M ++G++
Sbjct: 159 -----NEADSE-----------RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V++AC I+ V + G+ +V +AL+DMY K G +D A IF
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD--KDVFTANALVDMYMKMGRVDIASVIF 260
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
M +V S++++I G ++G H AI+L M + PN T +L ACS
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 301 VGLKCYG----VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+G + +G + +D Y +VD+ + L++A K+ + M + + AL+ C
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIG-NYIILSNIYASAGMWDDVSRVRRL 403
H R+ E A + +EL + +G N L+ + S + S R++
Sbjct: 380 S-HGGRHDE----ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 46/362 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++FE++ + W ALI G +L GH +I L M+ G+ P FTLS++ KAC+
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+QIH I SD Y+G ++ MY K FL +RKVFD M R
Sbjct: 318 AFDLGRQIHGFMIKANA-DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR--------- 367
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D + A+++G + EA+ F ++ G+ +
Sbjct: 368 ----------------------DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ + A L V +A GF I + V + LID Y KC + DA R+F
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVKIGF--IFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
++ + +SMI + AI+LF +M++ +P+ +L AC+ +
Sbjct: 464 ECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 307 GVSPS---------TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +D +A +V + G +E+A +P E W A++G
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLA 582
Query: 356 IH 357
H
Sbjct: 583 QH 584
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 42/301 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R+ E +N W L+ Y+ D+I ++ M GI P F S +
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT ++ G+Q+HA + +G + D++ N ++ MY+K
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMG-YDKDVFTANALVDMYMKM------------------- 250
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
G ++ A +F ++P D V+W A+++G V N AIE +M+Y+G
Sbjct: 251 ------------GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCG 236
+ + TL ++ AC+ G + GF N +G L+DMY+K
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQI------HGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+DDA ++F M R++ +++I G + GR A+ LF ++ K N T VL
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 297 A 297
+
Sbjct: 413 S 413
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 60/310 (19%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G +HA + G S N +I Y KC C+R+VFDE+P+ VSW+ L+ AY+
Sbjct: 23 GAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NNG PR AI+ F M+ GV + L
Sbjct: 80 NNG-------------------------------LPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 191 VISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-VG 247
V+ A+LG +A +A +GFG ++V V +AL+ MY G +DDA R+F
Sbjct: 109 VLKCVPDARLGAQVHA-----MAMATGFG--SDVFVANALVAMYGGFGFMDDARRVFNEA 161
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+RN S++ ++ + + + AIQ+FG+MV + +P F V+ AC+
Sbjct: 162 DSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG 221
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G +VD+ + G ++ A + EKMP + + W AL+ C +
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Query: 357 ----HRNPEI 362
HR E+
Sbjct: 281 NGHDHRAIEL 290
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 315/572 (55%), Gaps = 55/572 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W AL+ GY+ G + ++ L+ M + + +S + G + A+ +
Sbjct: 196 WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR---------GDMVEARRL 246
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY---------- 129
D++ ++ Y + G L +R+VFD MPER+ VSW ++ AY
Sbjct: 247 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 306
Query: 130 ---------------------ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
A G +E A +F+ +P KD V+W AM+ Y Q E
Sbjct: 307 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
++ F M G + V+S CA + ++ + +G+G VG+AL
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV--GCFVGNAL 424
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ MY KCG+++DA F M++R+V S+++MI G+A HG A+++F M T TKP+
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+T +GVL ACSH GL +GV+ +HY CM+DLLGRAG L EA +++
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
MP EP+ +WGALLGA +IHRNPE+ + AA +FELEP+ G Y++LSNIYAS+G W D
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 604
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
++R +++ G+KK PG+SW+E V H F AGD HP +I L DL R++ G
Sbjct: 605 ARKMRVMMEERGVKKVPGFSWIEVQNKV-HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAG 663
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
Y VL+DV +EEK+ +L HSEKLA+A+G+L PG +R++KNLR+C DCH
Sbjct: 664 YVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S + GR I++RD+ RFHHF+ G CSCG+YW
Sbjct: 724 YISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 30/338 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + ++ + A++ GY G L + SL+ ++ R P +++ + L A +
Sbjct: 60 LFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA--VS 113
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
SL A+ + D N MI + G + +R FD PE+D VSW ++
Sbjct: 114 SSLAD---ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLA 170
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY NG +E A GLFN D ++W A+++GYVQ K EA E F+RM D V+
Sbjct: 171 AYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMP----GRDVVS 226
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++S A+ G + A + + A P+ +V +A++ Y++ G +++A R+F
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAA------PVRDVFTWTAVVSGYAQNGMLEEARRVFDA 280
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +RN S+++M+ + A +LF M N ++ +LT + G+
Sbjct: 281 MPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEA 336
Query: 304 -KCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM 338
+ P D +A M+ + GC EE L++ +M
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D+ N ++ YV+ G + +R++FD MP RDVVSW ++ YA GDM A LF+ P
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
++D WTA+V+GY QN EA F+ M E + V+ +++A Q ++
Sbjct: 252 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMD---- 303
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
E E P NV + ++ Y++ G +++A +F M Q++ S+++M+ ++
Sbjct: 304 --EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQG 361
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GLKC 305
G + +QLF +M + N F VL+ C+ + L+C
Sbjct: 362 GCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALEC 401
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + K+ W A++ Y G ++++ L+ M R G + + C ++
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+H + ++ G+ +VGN ++ MY KCG + +R F+EM ERDVVSW +
Sbjct: 397 AALECGMQLHGR-LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G F +EA+E F+ M+ + D
Sbjct: 456 IAGYARHG--------FG-----------------------KEALEIFDMMRTTSTKPDD 484
Query: 186 VTLVGVISACAQLGVIK 202
+TLVGV++AC+ G+++
Sbjct: 485 ITLVGVLAACSHSGLVE 501
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 33/156 (21%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V+ + I + + G + DA R+F M +R+ +Y++M+ G++ +GR A LF +
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----R 93
Query: 282 TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+P+ ++ +L A L + L +A + ++MPV
Sbjct: 94 AIPRPDNYSYNTLLHA------------------------LAVSSSLADARGLFDEMPVR 129
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+ + ++ + H N + + A H F+L P+K
Sbjct: 130 -DSVTYNVMISS---HANHGLVSL-ARHYFDLAPEK 160
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/555 (38%), Positives = 318/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + ++ LW ALI G +++SL+C MR+EG TL+A+ K+ +
Sbjct: 358 KKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASL 417
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S +Q+HA LG F SD +V N +I Y KC L + +VF++ D++
Sbjct: 418 EAISDTRQVHALAEKLG-FLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDII----- 471
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A+T+M+T Q +AI+ F M G++ D
Sbjct: 472 --------------------------AFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDP 505
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
L +++ACA L + V F +++V G+AL+ Y+KCGSI+DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAF 563
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+ ++ V S+S+MI G A HG A+ +F MV PN +T VL AC+H GL
Sbjct: 564 SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVD 623
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+ + +HYACM+DLLGRAG L++A+++V MP + N VWGALL A
Sbjct: 624 EAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++HR+PE+ ++AA LF LEP+K G +++L+N YASAGMWDDV++VR+L+K + +KK P
Sbjct: 684 SRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEP 743
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F GD +HP + +I L +L D + GY PN+ L+DV EK
Sbjct: 744 AMSWVEL-KDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEK 802
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSE+LA+AF L++T GA +R+ KNLRIC DCH S ++ REI++RD R
Sbjct: 803 ELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINR 862
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 863 FHHFRDGACSCRDYW 877
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 190/423 (44%), Gaps = 56/423 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF +V + W A I G +L GH + ++ L M+ G+ P FTLS++ KAC
Sbjct: 258 VVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSG 317
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+LG+QIH ++ SD Y+ ++ MY K G L ++KV
Sbjct: 318 AFNLGRQIHG-FMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV---------------- 360
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
F+ +P +D V W A+++G A+ EA+ F RM+ G + +
Sbjct: 361 ---------------FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRT 405
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ + A L I V +AE GF ++VV G LID Y KC ++ AYR+F
Sbjct: 406 TLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNG--LIDSYWKCDCLNYAYRVFE 463
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
++ +++SMI + AI+LF +M++ P+ +L AC+ +
Sbjct: 464 KHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQ 523
Query: 307 GVSPS---------TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +D +A +V + G +E+A +P E W A++G
Sbjct: 524 GKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLA 582
Query: 356 IHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYAS---AGMWDDVSRVRRLLK-MTGL 409
H + + A + + + + P N+I ++++ + AG+ D+ R +K M G+
Sbjct: 583 QHGHGKRALDVFHRMVDEHISP----NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGI 638
Query: 410 KKN 412
++
Sbjct: 639 ERT 641
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 164/362 (45%), Gaps = 50/362 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ W++L+ Y +D++ + SMR + F L + K
Sbjct: 57 RRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP-- 114
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
D G Q+HA + G D++V N ++ MY GF+ +R VFDE ER+ VSW
Sbjct: 115 -DAGFGTQLHALA-MATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNG 172
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ A YV+N + A++ F M + GV+ +
Sbjct: 173 LMSA-------------------------------YVKNDRCSHAVKVFGEMVWGGVQPN 201
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V++AC ++ V + +G+ +V +AL+DMYSK G I A +
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD--KDVFTANALVDMYSKLGDIRMAAVV 259
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F + + +V S+++ I G +HG A++L M + PN T +L AC+
Sbjct: 260 FGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAF 319
Query: 300 HVGLKCYG----VSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++G + +G + +D+Y +VD+ + G L++A K+ + +P + + +W AL+
Sbjct: 320 NLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISG 378
Query: 354 CQ 355
C
Sbjct: 379 CS 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 48/345 (13%)
Query: 6 RLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R+VF++ +N W L+ Y+ ++ ++ M G+ P F S + ACT
Sbjct: 155 RMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTG 214
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
D+ G+++HA I G + D++ N ++ MY K
Sbjct: 215 SRDLEAGRKVHAMVIRTG-YDKDVFTANALVDMYSKL----------------------- 250
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
GD+ A +F ++P D V+W A ++G V + + A+E +M+ +G+ +
Sbjct: 251 --------GDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPN 302
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL ++ ACA G + + N + G L+DMY+K G +DDA ++
Sbjct: 303 VFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG--LVDMYAKHGLLDDAKKV 360
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHA-AIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
F + QR++ ++++I G + HG HA A+ LF M K N T VL + +
Sbjct: 361 FDWIPQRDLVLWNALISGCS-HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
H + G + ++D + CL A ++ EK
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 140/330 (42%), Gaps = 59/330 (17%)
Query: 46 EGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG 105
E IGP L + A +L G IHA + G F N ++ Y KC G
Sbjct: 5 ETIGP----LLTRYAATQSLLQ---GAHIHAHLLKSGLFA---VFRNHLLSFYSKCRLPG 54
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+R+VFDE+P+ VSW+ L+ AY+N NA
Sbjct: 55 SARRVFDEIPDPCHVSWSSLVTAYSN-------------------------------NAM 83
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
PR+A+ F M+ V + L V+ G + + +A +G G ++ V
Sbjct: 84 PRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLG--GDIFVA 138
Query: 226 SALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
+AL+ MY G +D+A +F +RN S++ ++ + + R A+++FG+MV
Sbjct: 139 NALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGV 198
Query: 285 KPNGVTFIGVLTACS-----HVGLKCYGVSPSTDH------YACMVDLLGRAGCLEEALK 333
+PN F V+ AC+ G K + + T + +VD+ + G + A
Sbjct: 199 QPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAV 258
Query: 334 MVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ K+P E + W A + C +H + + A
Sbjct: 259 VFGKVP-ETDVVSWNAFISGCVLHGHDQHA 287
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/555 (37%), Positives = 314/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R + ++++ ++ WTA+I GY +++ L+ M +GI + S+ AC +
Sbjct: 470 RGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGI 529
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ GQQIHAQ+ + G++ DL +GN ++ +Y +CG
Sbjct: 530 QALNQGQQIHAQS-YISGYSEDLSIGNALVSLYARCG----------------------- 565
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A F ++ KD ++W A+++G+ Q+ EA++ F +M AGVE +
Sbjct: 566 --------RAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANL 617
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +SA A IK + + +G+ + + LI +YSKCGSI+DA R F
Sbjct: 618 FTFGSAVSATANTANIKQGKQIHAMMIKTGYD--SETEASNVLITLYSKCGSIEDAKREF 675
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++NV S+++MI G++ HG A+ LF +M + PN VTF+GVL+ACSHVGL
Sbjct: 676 FEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVN 735
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P +HY C+VDLLGRA L A + +E+MP+EP+ +W LL A
Sbjct: 736 EGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSA 795
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N EI + AA HL ELEP+ Y++LSN+YA +G WD R R+++K G+KK P
Sbjct: 796 CTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEP 855
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + IH F GD HP + +I + + DL +R GY + ++L DV E+K
Sbjct: 856 GRSWIEV-KNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQK 914
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
HSEKLA+AFGLL+ + +R++KNLR+C DCH ++ S++ R IVVRD R
Sbjct: 915 DPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYR 974
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 975 FHHFEGGVCSCKDYW 989
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 171/360 (47%), Gaps = 46/360 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + +N LW ++ Y G+L +S ++ M+ EG+ P +T ++ + CT + +
Sbjct: 372 FLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGAL 431
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+QIH Q ++ GF ++YV + +I MY K
Sbjct: 432 DLGEQIHTQ-VIKSGFQFNVYVCSVLIDMYAK---------------------------- 462
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+G++++A G+ L +D V+WTAM+ GY Q+ EA++ F+ M+ G+ +D +
Sbjct: 463 ---HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGF 519
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
ISACA + + + + SG+ ++ +G+AL+ +Y++CG DAY F +
Sbjct: 520 SSAISACAGIQALNQGQQIHAQSYISGYS--EDLSIGNALVSLYARCGRAQDAYLAFEKI 577
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------- 299
++ S++++I GFA G A+Q+F M + + N TF ++A +
Sbjct: 578 DAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGK 637
Query: 300 --HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
H + G T+ ++ L + G +E+A + +MP E N W A++ H
Sbjct: 638 QIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQH 696
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 174/369 (47%), Gaps = 54/369 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+LVFE++ K+ W A+I G G ++I L+C M + + P + S++ ACT
Sbjct: 165 LAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT 224
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ LG+Q+H I+ G +S+ +V N ++ +Y + W
Sbjct: 225 KIELFKLGEQLHG-FIVKWGLSSETFVCNALVTLYSR---------------------WG 262
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI +A +F+++ +D++++ ++++G Q A++ FE+MQ ++
Sbjct: 263 NLI----------AAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKP 312
Query: 184 DYVTLVGVISACAQLGV----IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D VT+ ++SACA +G + ++V ++ G +++++ +L+D+Y KC I+
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKM------GMSSDLIIEGSLLDLYVKCFDIE 366
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A+ F+ + NV ++ M++ + G + +F M PN T+ +L C+
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 300 HVGLKCYGVSPST---------DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+G G T + Y C ++D+ + G L+ A +++++ E + W
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWT 485
Query: 349 ALLGACQIH 357
A++ H
Sbjct: 486 AMIAGYTQH 494
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
+F+ + N W +I G + + + L+ M E + P T +++ +AC+
Sbjct: 67 LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +QIHA+ I+ GF S V N +I +Y K
Sbjct: 127 PFQVTEQIHAK-IIHHGFGSSPLVCNPLIDLYSK-------------------------- 159
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
NG ++ A +F L LKD V+W AM++G QN + EAI F +M + V
Sbjct: 160 -----NGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPY 214
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAY 242
V+SAC ++ + K + GF G + V +AL+ +YS+ G++ A
Sbjct: 215 VFSSVLSACTKIELFKLGEQL------HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE 268
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+IF M +R+ SY+S+I G A G + A+QLF M KP+ VT +L+AC+ VG
Sbjct: 269 QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
++F + + V + LI Y +G++++A LF+++P + W +++G + +
Sbjct: 35 RIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQ 94
Query: 169 AIEYFERMQYAGVETDYVTLVGVISAC----AQLGVIKYANWVCEIAEGSGFGPINNVVV 224
+ F M V D T V+ AC A V + + I G G P+ V
Sbjct: 95 VLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI-IHHGFGSSPL----V 149
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
+ LID+YSK G +D A +F + ++ S+ +MI G + +GR AI LF M K+
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209
Query: 285 KPNGVTFIGVLTACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALK 333
P F VL+AC+ + L +G+S T +V L R G L A +
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 334 MVEKM 338
+ KM
Sbjct: 270 IFSKM 274
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/586 (36%), Positives = 319/586 (54%), Gaps = 55/586 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + W AL+ GY+ G + ++ L+ M + + +S +
Sbjct: 182 RGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR---- 237
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G + A+ + D++ ++ Y + G L +R+VFD MPER+ VSW +
Sbjct: 238 -----GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAM 292
Query: 126 IVAY-------------------------------ANNGDMESAGGLFNELPLKDKVAWT 154
+ AY A G +E A +F+ +P KD V+W
Sbjct: 293 VAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
AM+ Y Q E ++ F M G + V+S CA + ++ + +
Sbjct: 353 AMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRA 412
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G+G VG+AL+ MY KCG+++DA F M++R+V S+++MI G+A HG A++
Sbjct: 413 GYGV--GCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLL 322
+F M T TKP+ +T +GVL ACSH GL +GV+ +HY CM+DLL
Sbjct: 471 IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
GRAG L EA +++ MP EP+ +WGALLGA +IHRNPE+ + AA +FELEP+ G Y+
Sbjct: 531 GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590
Query: 383 ILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQ 442
+LSNIYAS+G W D ++R +++ G+KK PG+SW+E V H F AGD HP +I
Sbjct: 591 LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV-HTFSAGDCVHPEKEKIY 649
Query: 443 QALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIM 502
L DL R++ GY VL+DV +EEK+ +L HSEKLA+A+G+L PG +R++
Sbjct: 650 AFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVI 709
Query: 503 KNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
KNLR+C DCH S + GR I++RD+ RFHHF+ G CSCG+YW
Sbjct: 710 KNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 30/338 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + ++ + A++ GY G L + SL+ ++ R P +++ + L A +
Sbjct: 60 LFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA--VS 113
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
SL A+ + D N MI + G + +R FD PE+D VSW ++
Sbjct: 114 SSLAD---ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLA 170
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY NG +E A GLFN D ++W A+++GYVQ K EA E F+RM D V+
Sbjct: 171 AYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMP----GRDVVS 226
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++S A+ G + A + + A P+ +V +A++ Y++ G +++A R+F
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAA------PVRDVFTWTAVVSGYAQNGMLEEARRVFDA 280
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +RN S+++M+ + A +LF M N ++ +LT + G+
Sbjct: 281 MPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEA 336
Query: 304 -KCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM 338
+ P D +A M+ + GC EE L++ +M
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 33/156 (21%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V+ + I + + G + DA R+F M +R+ +Y++M+ G++ +GR A LF +
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF----R 93
Query: 282 TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+P+ ++ +L A L + L +A + ++MPV
Sbjct: 94 AIPRPDNYSYNTLLHA------------------------LAVSSSLADARGLFDEMPVR 129
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+ + ++ + H N + + A H F+L P+K
Sbjct: 130 -DSVTYNVMISS---HANHGLVSL-ARHYFDLAPEK 160
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 324/559 (57%), Gaps = 56/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ ++ +N W A+I+GY G ++++L+ M EG+ ++ A AC E+
Sbjct: 382 RKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGEL 441
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+++H + +G S++ V N +I MY KC + +VFD
Sbjct: 442 GFLDEGRRVHELLVRIG-LESNVNVMNALITMYCKCKRTDLAAQVFD------------- 487
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
EL K +V+W AM+ G QN +A+ F RMQ V+ D
Sbjct: 488 ------------------ELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDS 529
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI----NNVVVGSALIDMYSKCGSIDDA 241
TLV +I A A + A W+ G+ +V V +ALIDMY+KCG + A
Sbjct: 530 FTLVSIIPALADISDPLQARWI------HGYSIRLHLDQDVYVLTALIDMYAKCGRVSIA 583
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F + R+V ++++MI G+ HG A++LF +M + PN TF+ VL+ACSH
Sbjct: 584 RSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHA 643
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P +HY MVDLLGRAG L EA ++KMP+EP V+GA
Sbjct: 644 GLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGA 703
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N E+A+ +A +FELEP++ +++L+NIYA+A +W DV+RVR ++ GL
Sbjct: 704 MLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGL 763
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG+S ++ + IH F +G H + +I L L++ ++A GY P+ S+ +DV
Sbjct: 764 QKTPGWSIVQL-KNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVE 821
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+ K ++L THSEKLA+A+GL+ T+PG T++I KNLR+C+DCH S V GREI++R
Sbjct: 822 DDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMR 881
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSCG+YW
Sbjct: 882 DIQRFHHFKDGKCSCGDYW 900
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 36/284 (12%)
Query: 22 ALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTIL 80
A +R + L+ +++ + +M G GPV T ++L K C D++ G+ +HAQ +
Sbjct: 194 ARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQ-LA 252
Query: 81 LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGG 140
G + + + MY KC G +R+VFD MP R
Sbjct: 253 ARGLSPEALAATALANMYAKCRRPGDARRVFDRMPAR----------------------- 289
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLG 199
D+VAW A+V GY +N A+ RMQ G D VTLV V+ ACA
Sbjct: 290 --------DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQ 341
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ V A GF V V +A++D+Y KCG++D A ++F GM+ RN S+++M
Sbjct: 342 ALGACREVHAFAVRGGFD--EQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
I G+A +G A A+ LF MV V+ + L AC +G
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 143/297 (48%), Gaps = 35/297 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+++ ++ W AL+ GY G + ++ + M+ E G P + TL ++ AC +
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +++HA + GGF + V ++ +Y KCG + +RKVFD M +R+ VSW
Sbjct: 340 AQALGACREVHAFAVR-GGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I YA NGD EA+ F+RM GV+
Sbjct: 399 MIKGYAENGDAT-------------------------------EALALFKRMVGEGVDVT 427
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+++ + AC +LG + V E+ G +NV V +ALI MY KC D A ++
Sbjct: 428 DVSVLAALHACGELGFLDEGRRVHELLVRIGLE--SNVNVMNALITMYCKCKRTDLAAQV 485
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
F + + S+++MILG +G + A++LF M KP+ T + ++ A + +
Sbjct: 486 FDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADI 542
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F + ++ W A+I GY G K ++ L+ M+ G P T ++ AC
Sbjct: 581 SIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSAC 640
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ V GQ+ + G + TM+ + + G L + +MP
Sbjct: 641 SHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 330/562 (58%), Gaps = 52/562 (9%)
Query: 3 SFPRLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFK 60
S+ VF ++ K N F+W LIRGY G+ + SLY MR G + P + T L K
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A T + DV LG+ IH+ ++ GF S +YV N+++ +Y CG
Sbjct: 130 AVTTMADVRLGETIHS-VVIRSGFGSLIYVQNSLLHLYANCG------------------ 170
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
D+ SA +F+++P KD VAW +++ G+ +N KP EA+ + M G
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D T+V ++SACA++G + V G N+ + L+D+Y++CG +++
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL--TRNLHSSNVLLDLYARCGRVEE 275
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS 299
A +F M +N S++S+I+G A++G AI+LF M TE P +TF+G+L ACS
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H G+ + Y + P +H+ CMVDLL RAG +++A + ++ MP++PN +W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LLGAC +H + ++A+ A + +LEP+ G+Y++LSN+YAS W DV ++R+ +
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 408 GLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK PG+S +E G+R +HEF GD +HP S I L ++ RL+++GY P + +V
Sbjct: 456 GVKKVPGHSLVEVGNR--VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +EEK+ ++ HSEK+A+AF L++T + + ++KNLR+C DCHL + S+V REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
VVRD RFHHF++G CSC +YW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/623 (36%), Positives = 317/623 (50%), Gaps = 86/623 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F N LW ++ Y L S ++ M+ GI P FT + + CT
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQ 361
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH+ +I GF SD+YV +I MY K G L +RK+ + + +RDVVSWT +I
Sbjct: 362 IELGEQIHSLSIK-NGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 128 AYANNGDMESAGGLFNELP---------------------------------------LK 148
Y + E A F E+
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQY------------------------------ 178
D W +V Y + + EA F +++
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMG 540
Query: 179 -AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
AG + + T + ISA A L IK V A +G + V +ALI +Y KCGS
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH--TSETEVANALISLYGKCGS 598
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+DA IF M RN S++++I + HGR A+ LF M + KPN VTFIGVL A
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSHVGL YG++P DHYAC+VD+LGRAG L+ A + V++MP+ N
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM 718
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL AC++H+N EI ++AA HL ELEP +Y++LSN YA G W + +VR+++K
Sbjct: 719 IWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMK 778
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G++K PG SW+E + +H F GD HP S +I + L +L DRL GY+ ++
Sbjct: 779 DRGIRKEPGRSWIEV-KNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLF 837
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ E+K HSEKLA+AFGL+T P +R++KNLR+C+DCH +M S+V RE
Sbjct: 838 HEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRRE 897
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IV+RD RFHHF G CSCG+YW
Sbjct: 898 IVLRDVYRFHHFNSGSCSCGDYW 920
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 45/344 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W A++ GY G K++ LY M + P + LS++ ACT+
Sbjct: 98 RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IHAQ + F S+ +VGN +I +Y+ G + +VF +M D V++ L
Sbjct: 158 KLFAQGRMIHAQ-VYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +A G E A++ F+ MQ +G+ D
Sbjct: 217 ISGHAQCGHGEC-------------------------------ALQIFDEMQLSGLRPDC 245
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ +++ACA +G ++ + +G + + GS L+D+Y KCG I+ A+ IF
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLKAGMS-FDYITEGS-LLDLYVKCGDIETAHDIF 303
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
+ NV ++ M++ + + ++FG M T PN T+ +L C+
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363
Query: 301 VGLKCYGVSPS----TDHY--ACMVDLLGRAGCLEEALKMVEKM 338
+G + + +S +D Y ++D+ + GCL++A K++E +
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI YA NG + A +F EL +D V+W AM++GY Q+ +EA + +M + V
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
L V+SAC + + + F + VG+ALI +Y GS A R+
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAF--CSETFVGNALIALYLGFGSFKLAERV 201
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M + +++++I G A G A+Q+F +M + +P+ VT +L AC+ VG
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG 259
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 318/559 (56%), Gaps = 49/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ +F + N F+W +IRGY + +I+LY M GI P S+T + KAC
Sbjct: 58 AYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC 117
Query: 63 TEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
++L + GQ++H+Q + +G F + L N +I +Y CG
Sbjct: 118 CKLLRLCEGQELHSQIVKVGLDFETPLV--NGLIKLYAACGC------------------ 157
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
M+ A +F+E+P D +W+ MV+GY QN + EA++ F MQ V
Sbjct: 158 -------------MDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENV 204
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+D TL V+ C LG + WV + G +VV+G+AL+ MYSKCGS+D+A
Sbjct: 205 SSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKI--DVVLGTALVGMYSKCGSLDNA 262
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F GM +R+V ++S+MI G+A+HG A+QLF M +++T PN VTF VL+ACSH
Sbjct: 263 LKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHS 322
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL Y ++P HY CMVDL RAG + A K ++ MP+EPN +W
Sbjct: 323 GLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRT 382
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC+ H ++ + + + +L+P NY+++SN+YAS G W V +VR L+K
Sbjct: 383 LLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAP 442
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK G+S +E + ++H+F GD +HP +I L + +L+ G+ + VL+D+
Sbjct: 443 KKQHGWSSIEINF-MVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDID 501
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSE+LA+A+GLL T G+ +RI+KNLR+C DCH + S+V REI+VR
Sbjct: 502 EEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVR 561
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFHHF++ CSC +YW
Sbjct: 562 DRVRFHHFRERGCSCNDYW 580
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +LV I C ++G +K A + + + ++ S+ + + G + A+R
Sbjct: 6 DQGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTL---SGHVAYAHR 62
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
IF N+F ++++I G+++ AI L+ DM PN TF VL AC
Sbjct: 63 IFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLR 122
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H + G+ T ++ L GC++ A M ++MP EP+ W ++
Sbjct: 123 LCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPDSASWSTMVS 181
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/477 (42%), Positives = 291/477 (61%), Gaps = 14/477 (2%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G +D +V + ++ MY G + SR F E+ DVV T ++ A A GD+++A LF
Sbjct: 144 GHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCVTAMVAALAAGGDVDAARDLF 203
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+ +P +D VAW+AM+ GY+ + REA+ F+ M AG TLV V++ACAQ+G +
Sbjct: 204 DGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLD 263
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
WV G ++ +G+AL+DMYSKCG++ A +F M +RNV++++S + G
Sbjct: 264 RGKWVHWYVRSRGMQ--MSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSG 321
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC------YGVSPS 311
AM+G +QLF M +PNGV+F+ VL CS GL C YGV P
Sbjct: 322 LAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPW 381
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
+HY CMVDL GRAG L++A+ + MP+EP+ GVWGALL A +IH + ++ + A + L
Sbjct: 382 PEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLL 441
Query: 372 ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAG 431
+E + ++ LSNIYA + W VSRVR ++K G+KK PG+S +E D G +HEF G
Sbjct: 442 AIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVD-GKVHEFYVG 500
Query: 432 DLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLL 491
HP EI+ L ++ RL+ GY N R VL+D+ +EEK+ + HSEKLALAFGL+
Sbjct: 501 GRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLI 560
Query: 492 TTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH ++ S+V REIV+RD RFHHF+ G+CSC +YW
Sbjct: 561 VLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W+A+I GY+ G ++++ L+ M G TL ++ AC ++
Sbjct: 200 RDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQI 259
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + G + +G ++ MY KCG + + +VF+ M ER+V +W
Sbjct: 260 GTLDRGKWVH-WYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTW--- 315
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T+ V+G N E ++ F+RM+ AG++ +
Sbjct: 316 ----------------------------TSAVSGLAMNGMGTECLQLFKRMEGAGIQPNG 347
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
V+ V V+ C+ G++ + + G P ++D+Y + G +DDA
Sbjct: 348 VSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHY--GCMVDLYGRAGRLDDA 401
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 320/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL FE + Y + L + +I Y + + L+ + R + P ++LS++ +ACT +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+QIH I +G SDL+VGN ++ Y KC
Sbjct: 378 VQLDFGKQIHNHAIKIG-HESDLFVGNALMDFYAKCN----------------------- 413
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DM+S+ +F+ L ++V+W +V G+ Q+ EA+ F MQ A +
Sbjct: 414 --------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V+ ACA I++A + E S F N+ V+G++LID Y+KCG I DA ++F
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFN--NDTVIGNSLIDTYAKCGYIRDALKVF 523
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ +R++ S++++I G+A+HG+A A++LF M K+ + N +TF+ +L+ CS GL
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583
Query: 306 YGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+S PS +HY C+V LLGRAG L +AL+ + +P P+ VW ALL +
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C IH+N + + +A + E+EP Y++LSN+YA+AG D V+ +R+ ++ G++K P
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH F G + HP+ I L L + +GY P++ VL+DV E+K
Sbjct: 704 GLSWVE-IKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQK 762
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
R+L HSE+LALA+GL+ T PG +RI+KNLR C DCH S+++ REI+VRD R
Sbjct: 763 TRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINR 822
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG+YW
Sbjct: 823 FHHFEDGKCSCGDYW 837
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ +WTA++ Y +++ ++ MR G P F L+++ KA +
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+ IH I T + +VG ++ MY KCG
Sbjct: 279 VVLGKGIHGCAIKTLNDT-EPHVGGALLDMYAKCG------------------------- 312
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D++ A F +P D + + M++ Y Q+ + +A E F R+ + V + +
Sbjct: 313 ------DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 366
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC + + + + A G +++ VG+AL+D Y+KC +D + +IF
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHA--IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------HV 301
++ N S++++++GF+ G A+ +F +M + VT+ VL AC+ H
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484
Query: 302 GLKCYGVSPSTDHY-----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
G + ST + ++D + G + +ALK+ + + +E + W A++ +
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYAL 543
Query: 357 H 357
H
Sbjct: 544 H 544
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 34/250 (13%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCS 107
G SF + + C D G+ +H + GG DL+ N ++ MY K G L +
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
R++FD MPER++VS+ L+ A+A GD E+A LF L + ++T ++ A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA--- 172
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
+ D L G + +CA W G +N VGS
Sbjct: 173 -------------IAMDAAGLAGGVHSCA---------W--------KLGHDHNAFVGSG 202
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LID YS C + DA +F G+ +++ +++M+ ++ + A ++F M + KPN
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 288 GVTFIGVLTA 297
VL A
Sbjct: 263 PFALTSVLKA 272
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N + L++ + +G + + +L+ +R EG F L+ + K +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +H+ LG + +VG+ +I Y C +
Sbjct: 176 DAAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLV--------------------- 213
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A +FN + KD V WTAMV+ Y +N P A F +M+ +G + +
Sbjct: 214 ----------SDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNP 263
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV--VGSALIDMYSKCGSIDDAYR 243
L V+ A L + + G +N+ VG AL+DMY+KCG I DA
Sbjct: 264 FALTSVLKAAVCLPSVVLGKGI----HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARL 319
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
F + +V S MI +A + A +LF ++++ PN + VL AC+++
Sbjct: 320 AFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 313/555 (56%), Gaps = 51/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ ++ WTAL GY G +++I L+ M G+ P S+ + + AC V D
Sbjct: 168 VFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGD 227
Query: 68 VSLGQQI--HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ I H + + + + +V T++ +Y KCG
Sbjct: 228 LDSGEWIVKHMEEMEM---QKNSFVRTTLVNLYAKCG----------------------- 261
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
ME A +F+ + KD V W+ M+ GY N+ P+E IE+F +M ++ D
Sbjct: 262 --------KMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQ 313
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++VG +S+CA LG + W + + F + N+ + +ALIDMY+KCG++ + +F
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEF--LTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
MK++++ ++ I G A +G + +FG K P+G TF+G+L C H GL
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 304 ---------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
C Y + + +HY CMVDL GRAG L++A +++ MP+ PN VWGALL
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ ++ ++A+ L LEP GNY+ LSNIY+ +G WD+ + VR ++ G+KK P
Sbjct: 492 CRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIP 551
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + G +HEF A D +HP S +I L DL + ++ G+ P V +DV DEEK
Sbjct: 552 GYSWIELE-GTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEK 610
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+R+L HSEKLA+AFGL++T G +R++KNLR+C DCH M S++ REIVVRDN R
Sbjct: 611 ERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNR 670
Query: 534 FHHFQDGKCSCGNYW 548
FH F +G CSC +YW
Sbjct: 671 FHCFTNGSCSCNDYW 685
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 167/346 (48%), Gaps = 45/346 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ L+F ++ N FL+ LI G++ +++ L+ S+R+ G+ FT + KACT
Sbjct: 63 YSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACT 122
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG +H+ + VKCGF DV + T
Sbjct: 123 RASNRKLGIDLHS--------------------LVVKCGF------------NHDVAAMT 150
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ Y+ +G + A +F E+P + V WTA+ +GY K REAI+ F++M GV
Sbjct: 151 SLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRP 210
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +V V+SAC +G + W+ + E N V + L+++Y+KCG ++ A
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQ--KNSFVRTTLVNLYAKCGKMEKARS 268
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F M ++++ ++S+MI G+A + I+ F M++ KP+ + +G L++C+ +G
Sbjct: 269 VFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 303 --LKCYGVSPSTDH--------YACMVDLLGRAGCLEEALKMVEKM 338
L +G+S H ++D+ + G + ++ ++M
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 53/327 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W+ +I+GY K+ I + M +E + P F++ +C +
Sbjct: 267 RSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ I F ++L++ N +I MY KCG + +VF EM E+D+
Sbjct: 327 GALDLGEW-GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI------ 379
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
V A ++G +N + + F + + G+ D
Sbjct: 380 -------------------------VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 186 VTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T +G++ C G+I ++ N + + + V ++D++ + G +DDA
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCV-----YALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 242 YRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
YR+ M R N + +++ G +L D ET + + A ++
Sbjct: 470 YRLICDMPMRPNAIVWGALLSG----------CRLVKDTQLAETVLKELIALEPWNAGNY 519
Query: 301 VGL-KCYGVSPSTDHYACMVDLLGRAG 326
V L Y VS D A + D++ R G
Sbjct: 520 VQLSNIYSVSGRWDEAAEVRDMMNRKG 546
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 315/572 (55%), Gaps = 55/572 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W AL+ GY+ G + ++ L+ M + + +S + G + A+ +
Sbjct: 71 WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR---------GDMVEARRL 121
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY---------- 129
D++ ++ Y + G L +R+VFD MPER+ VSW ++ AY
Sbjct: 122 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 181
Query: 130 ---------------------ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
A G +E A +F+ +P KD V+W AM+ Y Q E
Sbjct: 182 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 241
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
++ F M G + V+S CA + ++ + +G+G VG+AL
Sbjct: 242 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV--GCFVGNAL 299
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ MY KCG+++DA F M++R+V S+++MI G+A HG A+++F M T TKP+
Sbjct: 300 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 359
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+T +GVL ACSH GL +GV+ +HY CM+DLLGRAG L EA +++
Sbjct: 360 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 419
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
MP EP+ +WGALLGA +IHRNPE+ + AA +FELEP+ G Y++LSNIYAS+G W D
Sbjct: 420 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 479
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
++R +++ G+KK PG+SW+E V H F AGD HP +I L DL R++ G
Sbjct: 480 ARKMRVMMEERGVKKVPGFSWIEVQNKV-HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAG 538
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
Y VL+DV +EEK+ +L HSEKLA+A+G+L PG +R++KNLR+C DCH
Sbjct: 539 YVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 598
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S + GR I++RD+ RFHHF+ G CSCG+YW
Sbjct: 599 YISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D+ N ++ YV+ G + +R++FD MP RDVVSW ++ YA GDM A LF+ P
Sbjct: 67 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 126
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
++D WTA+V+GY QN EA F+ M E + V+ +++A Q ++
Sbjct: 127 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMD---- 178
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
E E P NV + ++ Y++ G +++A +F M Q++ S+++M+ ++
Sbjct: 179 --EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQG 236
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GLKC 305
G + +QLF +M + N F VL+ C+ + L+C
Sbjct: 237 GCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALEC 276
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 21/254 (8%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N MI + G + +R FD PE+D VSW ++ AY NG +E A GLFN D +
Sbjct: 10 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W A+++GYVQ K EA E F+RM D V+ ++S A+ G + A + + A
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAA 125
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P+ +V +A++ Y++ G +++A R+F M +RN S+++M+ +
Sbjct: 126 ------PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 179
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTD--HYACMVDLLGR 324
A +LF M N ++ +LT + G+ + P D +A M+ +
Sbjct: 180 AKELFNMM----PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 235
Query: 325 AGCLEEALKMVEKM 338
GC EE L++ +M
Sbjct: 236 GGCSEETLQLFIEM 249
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + K+ W A++ Y G ++++ L+ M R G + + C ++
Sbjct: 212 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 271
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+H + ++ G+ +VGN ++ MY KCG + +R F+EM ERDVVSW +
Sbjct: 272 AALECGMQLHGR-LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 330
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G F +EA+E F+ M+ + D
Sbjct: 331 IAGYARHG--------FG-----------------------KEALEIFDMMRTTSTKPDD 359
Query: 186 VTLVGVISACAQLGVIK 202
+TLVGV++AC+ G+++
Sbjct: 360 ITLVGVLAACSHSGLVE 376
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 22/247 (8%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP RD V++ +I ++AN+G + A F+ P KD V+W M+ YV+N + EA F
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+ E D ++ ++S Q G + E E P +VV + ++ Y+
Sbjct: 61 N----SRTEWDVISWNALMSGYVQWGKMS------EARELFDRMPGRDVVSWNIMVSGYA 110
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
+ G + +A R+F R+VF++++++ G+A +G A ++F M + N V++
Sbjct: 111 RRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWNA 166
Query: 294 VLTACSHVGL-----KCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
++ A + + + + P + + M+ +AG LEEA + + MP + +
Sbjct: 167 MVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVS 225
Query: 347 WGALLGA 353
W A+L A
Sbjct: 226 WAAMLAA 232
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 317/553 (57%), Gaps = 56/553 (10%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+++ +K+ W +I GY +G ++ + L+ SM E +V
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-------------------MEKNEV 187
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S N MI Y++CG L + F P R VV+WT +I
Sbjct: 188 SW---------------------NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 129 YANNGDMESAGGLFNELPL-KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y +E A +F ++ + K+ V W AM++GYV+N++P + ++ F M G+ +
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L + C++L ++ + +I S N+V ++LI MY KCG + DA+++F
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTL--CNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+++V ++++MI G+A HG A A+ LF +M+ + +P+ +TF+ VL AC+H GL
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V P DHY CMVDLLGRAG LEEALK++ MP P+ V+G LLGAC+
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 464
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N E+A+ AA L +L Y+ L+NIYAS W+DV+RVR+ +K + + K PGY
Sbjct: 465 VHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGY 524
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E R +H FR+ D HP I + L +L +++ GY+P L L++V +E+K++
Sbjct: 525 SWIE-IRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEK 583
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L+ HSEKLA+AFG + G+ +++ KNLRIC DCH + S++ REI+VRD RFH
Sbjct: 584 LLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFH 643
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 644 HFKDGSCSCGDYW 656
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+ ++FDE+PE D S+ ++ Y N + E A F+ +P KD +W M+TGY + +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
+A E F Y+ +E + V+ +IS + G ++ A+ ++A P+ VV +
Sbjct: 172 EKARELF----YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA------PVRGVVAWT 221
Query: 227 ALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
A+I Y K ++ A +F M +N+ ++++MI G+ + R ++LF M++ +
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 286 PNGVTFIGVLTACSHVGLKCYG------VSPST-----DHYACMVDLLGRAGCLEEALKM 334
PN L CS + G VS ST ++ + + G L +A K+
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 335 VEKMPVEPNGGVWGALLGACQIHRNPEIA 363
E M + + W A++ H N + A
Sbjct: 342 FEVMK-KKDVVAWNAMISGYAQHGNADKA 369
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 37/302 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + KN W A+I GYI G L+ + + G+ + ++ KA
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 66 L------DVSLGQQIHAQTILLGGFTSD------LYVGNTMIGMYVK-------CGFLGC 106
L D+++ + + ++ G+ + L + M+ ++ LGC
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 107 S--------RKVFDEMPE----RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
S R++ + + DV + T LI Y G++ A LF + KD VAW
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE-IAEG 213
AM++GY Q+ +A+ F M + D++T V V+ AC G++ E +
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
P + + ++D+ + G +++A ++ M R + +LG R H +
Sbjct: 415 YKVEPQPDHY--TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC---RVHKNV 469
Query: 274 QL 275
+L
Sbjct: 470 EL 471
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 321/554 (57%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ K+ L+ + RGY + SL+ + G+ P +T S+L KAC
Sbjct: 86 LFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKA 145
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +H + LG ++Y+ T+I MY +C
Sbjct: 146 LREGMGLHCFAVKLG-LNHNIYICPTLINMYAECN------------------------- 179
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
DM +A G+F+E+ V++ A++TGY ++++P EA+ F +Q + +E VT
Sbjct: 180 ------DMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVT 233
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ VI +CA LG + W+ E + GF V V +ALIDM++KCGS+ DA IF G
Sbjct: 234 MLSVIMSCALLGALDLGKWIHEYVKKKGFDKY--VKVNTALIDMFAKCGSLTDAISIFEG 291
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+ R+ ++S+MI+ FA HG AI +F +M + +P+ +TF+G+L ACSH GL
Sbjct: 292 MRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG 351
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG++P HY CMVDLLGRAG L+EA V+K+ ++ +W LL AC
Sbjct: 352 RGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACS 411
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+A+ +FEL+ G+Y+ILSN+YA G W+DV+ +R+L+K G+ K PG
Sbjct: 412 THGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGC 471
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVSDEEKK 474
S +E + V+HEF +GD H S E+++AL +L+ ++ GY P+ V + D+ +E K+
Sbjct: 472 SSVEVN-NVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKE 530
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSEKLA+AFGLL T PG T+R+ KNLRIC DCH S + GR+IV+RD RF
Sbjct: 531 LVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRF 590
Query: 535 HHFQDGKCSCGNYW 548
H F+DGKCSCG++W
Sbjct: 591 HRFEDGKCSCGDFW 604
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
M+ A LF+++ KD + + M GY ++ P A F + +G+ D T ++ A
Sbjct: 80 MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA ++ + A G +N+ + LI+MY++C ++ A +F M+Q +
Sbjct: 140 CASSKALREGMGLHCFAVKLGLN--HNIYICPTLINMYAECNDMNAARGVFDEMEQPCIV 197
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------L 303
SY+++I G+A + + A+ LF ++ + +P VT + V+ +C+ +G +
Sbjct: 198 SYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYV 257
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
K G ++D+ + G L +A+ + E M V + W A++ A H
Sbjct: 258 KKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVR-DTQAWSAMIVAFATH 310
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 35/238 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++++ + A+I GY +++SL+ ++ I P T+ ++ +C +
Sbjct: 185 RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALL 244
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ IH + + GF + V +I M+ KCG L + +F+ M RD +W+ +
Sbjct: 245 GALDLGKWIH-EYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAM 303
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IVA+A +GD GL +AI FE M+ GV D
Sbjct: 304 IVAFATHGD-----GL--------------------------KAISMFEEMKREGVRPDE 332
Query: 186 VTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+T +G++ AC+ G+++ + +++ G P + ++D+ + G +D+AY
Sbjct: 333 ITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITP--GIKHYGCMVDLLGRAGHLDEAY 388
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 323/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + K+ W +I G G +++++ M + P SFTLS++ E
Sbjct: 254 RKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAEN 313
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+S G++IH +I G +++YV +++I MY KC + S +VF + ERD +S
Sbjct: 314 VDISKGKEIHGCSIR-QGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS---- 368
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +++ G VQN E +++F +M A ++
Sbjct: 369 ---------------------------WNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKS 401
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ ACA L + + +GF N+ + S+L+DMY+KCG+I A +IF
Sbjct: 402 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFD--ENIFIASSLVDMYAKCGNIRTARQIF 459
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M+ R++ S+++MI+G A+HG A AI+LF M +PN V F+ VLTACSH GL
Sbjct: 460 DRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVD 519
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G++P +HYA + DLLGRAG LEEA + MP+ P G VW LL A
Sbjct: 520 EAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA 579
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N ++A+ AN + E++P G YI+L+NIY++A W + ++ R L+ TG++K P
Sbjct: 580 CRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTP 639
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E R ++ F AGD +HP +I++A+ L++ ++ +GY P+ V +DV +E+K
Sbjct: 640 ACSWIEV-RNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQK 698
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
K ++ +HSE+LA+ FG++ T G T+R+ KNLR+C DCH S+++GREIVVRDN R
Sbjct: 699 KYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSR 758
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 759 FHHFKNGTCSCGDYW 773
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 188/469 (40%), Gaps = 92/469 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + + W ++IR Y G S+ + M G+ P ++ KAC ++D
Sbjct: 64 LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS-------RKVFDEMPERDVV 120
++LG+ +H I + G DLY GN ++ MY K FL S +V DEM ER
Sbjct: 124 LNLGESLHGYIIRV-GLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRS 182
Query: 121 SWTELIVAYANNGDMESAGGLFN---------------ELPLKDKVAWTAM--------- 156
T ++ N G S FN E+ K + + M
Sbjct: 183 VRTASVLV-GNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQI 241
Query: 157 ------------------------------VTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ G +N E + M A ++ D
Sbjct: 242 KDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSF 301
Query: 187 TLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+ A+ I + C I +G V V S+LIDMY+KC + D+YR+
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLD----AEVYVASSLIDMYAKCTRVVDSYRV 357
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F + +R+ S++S+I G +G ++ F M+ + KP +F ++ AC+H+
Sbjct: 358 FTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTL 417
Query: 303 -----LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
L Y D + +VD+ + G + A ++ ++M + + W A++
Sbjct: 418 HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMG 476
Query: 354 CQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWDD 396
C +H + + A LFE +EP+ + +L+ + AG+ D+
Sbjct: 477 CALHGHA----LDAIELFEQMKTEGIEPNYVAFMAVLTAC-SHAGLVDE 520
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/477 (42%), Positives = 291/477 (61%), Gaps = 14/477 (2%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G +D +V + ++ MY G + SR F E+ DVV T ++ A A GD+++A LF
Sbjct: 1349 GHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCVTAMVAALAAGGDVDAARDLF 1408
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+ +P +D VAW+AM+ GY+ + REA+ F+ M AG TLV V++ACAQ+G +
Sbjct: 1409 DGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLD 1468
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
WV G ++ +G+AL+DMYSKCG++ A +F M +RNV++++S + G
Sbjct: 1469 RGKWVHWYVRSRGMQ--MSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSG 1526
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KC------YGVSPS 311
AM+G +QLF M +PNGV+F+ VL CS GL C YGV P
Sbjct: 1527 LAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPW 1586
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
+HY CMVDL GRAG L++A+ + MP+EP+ GVWGALL A +IH + ++ + A + L
Sbjct: 1587 PEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLL 1646
Query: 372 ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAG 431
+E + ++ LSNIYA + W VSRVR ++K G+KK PG+S +E D G +HEF G
Sbjct: 1647 AIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVD-GKVHEFYVG 1705
Query: 432 DLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLL 491
HP EI+ L ++ RL+ GY N R VL+D+ +EEK+ + HSEKLALAFGL+
Sbjct: 1706 GRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLI 1765
Query: 492 TTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH ++ S+V REIV+RD RFHHF+ G+CSC +YW
Sbjct: 1766 VLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W+A+I GY+ G ++++ L+ M G TL ++ AC ++
Sbjct: 1405 RDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQI 1464
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + G + +G ++ MY KCG + + +VF+ M ER+V +W
Sbjct: 1465 GTLDRGKWVH-WYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTW--- 1520
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T+ V+G N E ++ F+RM+ AG++ +
Sbjct: 1521 ----------------------------TSAVSGLAMNGMGTECLQLFKRMEGAGIQPNG 1552
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
V+ V V+ C+ G++ + + G P ++D+Y + G +DDA
Sbjct: 1553 VSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHY--GCMVDLYGRAGRLDDA 1606
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 327/558 (58%), Gaps = 22/558 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+FE + ++ W +I GY G ++ + M + P +FT++++ AC +
Sbjct: 435 MFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLR 494
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTE 124
+ +G+Q+H+ IL G + N +I Y K G + +R++ D+ + + +V+S+T
Sbjct: 495 MLKMGKQMHSY-ILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTA 553
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GD + A +F+ + +D +AWTAM+ GY QN + EA+E F M G E +
Sbjct: 554 LLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPN 613
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TL V+SACA L + Y + C+ +V V +A+I +Y++ GS+ A R
Sbjct: 614 SHTLAAVLSACASLAYLDYGKQIHCKAIRSL---QEQSVSVSNAIITVYARSGSVPLARR 670
Query: 244 IFVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + R +++SMI+ A HG A+ LF +MV+ KP+ +T++GVL+AC+H G
Sbjct: 671 VFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAG 730
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+G+ P HYACMVDL RAG L EA + +++MPV P+ VWG+L
Sbjct: 731 FVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSL 790
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++ +N ++A++AA L ++P G Y L+N+Y++ G W+D +R+ +L K G+K
Sbjct: 791 LAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVK 850
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G+SW RG +H F A D+ HP I + ++ + ++ G+ P+L SVL+DV D
Sbjct: 851 KETGFSWTHV-RGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDD 909
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K+ +L HSEKLA+AFGL++T T+RIMKNLR+C DCH + S+ + REI+VRD
Sbjct: 910 ELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRD 969
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 970 ATRFHHFRDGYCSCKDYW 987
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 202/442 (45%), Gaps = 55/442 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF ++ ++ WT +I G G D++ + M EG P FTL+ + +C +
Sbjct: 302 VVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAME 361
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+G+++H + LG +S + V N+++ MY KCG +R VF+ M R V SW ++
Sbjct: 362 ACGVGRKVHPFVVKLG-LSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMV 420
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDY 185
Y + G ME A +F + + V+W ++ GY QN A+++F RM A +E D
Sbjct: 421 SLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDA 480
Query: 186 VTLVGVISACAQLGVIKYANWV----------CE-------IAEGSGFGPIN-------- 220
T+ V+SACA L ++K + C I+ + G +
Sbjct: 481 FTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQ 540
Query: 221 ------NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
NV+ +AL++ Y K G A IF M R+V ++++MI+G+ +G+ A++
Sbjct: 541 AVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAME 600
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVDLLG 323
LF M+ +PN T VL+AC+ + YG S ++ +
Sbjct: 601 LFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYA 660
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDK 377
R+G + A ++ +++ W +++ A H E A + LFE ++PD
Sbjct: 661 RSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVV----LFEEMVRVGVKPDH 716
Query: 378 IGNYIILSNIYASAGMWDDVSR 399
I Y+ + + A AG D R
Sbjct: 717 I-TYVGVLSACAHAGFVDKGKR 737
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF-LGCSRK---VFDE 113
L + C ++ S G+ IHA + G S Y+ N ++ Y G GC R+ +FD+
Sbjct: 215 LLQLCRTAVNPSAGRAIHAHAVKAGLLVST-YLCNNLLAYYASVGVSRGCFREARCLFDD 273
Query: 114 MP--ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
+P R+ +W L+ YA +G + A +F E+P +D V+WT M+ G ++ + +A++
Sbjct: 274 IPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVK 333
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F M G TL V+S+CA + V G + V V ++++ M
Sbjct: 334 TFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLS--SCVPVANSVLYM 391
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
Y KCG + A +F M+ R+V S++ M+ + GR A+ +F +MV+
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 34/244 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ WTA+I GY G +++ L+ SM G P S TL+A+ AC +
Sbjct: 568 REIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASL 627
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
+ G+QIH + I S + V N +I +Y + G + +R+VFD++ R + ++WT
Sbjct: 628 AYLDYGKQIHCKAIRSLQEQS-VSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTS 686
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+IVA A +G E +A+ FE M GV+ D
Sbjct: 687 MIVAMAQHGLGE-------------------------------QAVVLFEEMVRVGVKPD 715
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
++T VGV+SACA G + E + G + + + ++D++++ G + +A+
Sbjct: 716 HITYVGVLSACAHAGFVDKGKRYYEQMQNE-HGIVPQMSHYACMVDLHARAGLLTEAHEF 774
Query: 245 FVGM 248
M
Sbjct: 775 IQRM 778
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N ++L+ +Y+K G + DA+ +F M R+ S++ MI+G GR A++ F DMV
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 281 KTETKPNGVTFIGVLTACSH-----VGLKCY------GVSPSTDHYACMVDLLGRAGCLE 329
P+ T VL++C+ VG K + G+S ++ + G+ G E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 330 EALKMVEKMPVE 341
A + E+M V
Sbjct: 400 TARAVFERMQVR 411
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 318/570 (55%), Gaps = 61/570 (10%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+F+ ++ +N L WTA+I GY +G ++++L+ M G P T+ ++ AC
Sbjct: 353 LFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACA 412
Query: 64 EVLDVSLGQQIHAQTIL---------LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ S G +IHA ++ GG DL V N +I MY KC +R +
Sbjct: 413 SLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI---- 468
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEY 172
F+++PL+++ V WT M+ G+ Q +A++
Sbjct: 469 ---------------------------FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 501
Query: 173 FERM--QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F M + GV + T+ ++ ACA L I+ + + V + LID
Sbjct: 502 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLID 561
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG +D A +F M Q++ S++SM+ G+ MHGR A+ +F M K P+ +T
Sbjct: 562 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 621
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ VL ACSH G+ YG++P +HYAC +DLL R+G L++A + V+ M
Sbjct: 622 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDM 681
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P+EP VW ALL AC++H N E+A+ A N L E+ + G+Y ++SNIYA+AG W DV+
Sbjct: 682 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 741
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
R+R L+K +G+KK PG SW++G +G F GD +HP S +I L L+DR++A GY
Sbjct: 742 RIRHLMKKSGIKKRPGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 800
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P L+DV +EEK +L+ HSEKLALA+GLLTTSPG +RI KNLR+C DCH
Sbjct: 801 PETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYI 860
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EIVVRD RFHHF++G CSCG YW
Sbjct: 861 SKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 50/394 (12%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----------RREGIGPVSF 53
++F+++ + + W +++ ++ + ++ L+ M R I
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI----I 266
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
++ + AC + V +++H I G F D++VGN +I Y KCG + + KVF+
Sbjct: 267 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFP-DVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPRE 168
M +DVVSW ++ Y+ +G+ E+A LF + PL D V WTA++ GY Q E
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHE 384
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIAEGSGF-GPIN 220
A+ F +M ++G + VT++ V+SACA LG Y+ C + + F G
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+++V +ALIDMYSKC S A IF + +++RNV +++ MI G A +G ++ A++LF +
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 279 MVKTE--TKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYA--------CMVDLLG 323
M+ PN T +L AC+H +G + + Y C++D+
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G ++ A + + M + + W +++ +H
Sbjct: 565 KCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 597
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 36/311 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ LV E+V W LIR +I QG L +I++ C M R G P FTL + KAC
Sbjct: 107 YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACG 166
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVV 120
E+ G H I GF S++++ N ++ MY +CG L + +FDE+ +R DV+
Sbjct: 167 ELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 225
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW ++ A+ + + +A LF+++ L + + KP ER
Sbjct: 226 SWNSIVSAHVKSSNAWTALDLFSKMTL-------------IVHEKPTN-----ER----- 262
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+D +++V ++ AC L + V A +G P +V VG+ALID Y+KCG +++
Sbjct: 263 --SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP--DVFVGNALIDAYAKCGLMEN 318
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT---- 296
A ++F M+ ++V S+++M+ G++ G AA +LF +M K + VT+ V+
Sbjct: 319 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 378
Query: 297 -ACSHVGLKCY 306
CSH L +
Sbjct: 379 RGCSHEALNLF 389
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT+++ GY + G +++ ++ MR+ G P T + AC+
Sbjct: 573 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 632
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G G T I + + G L + + +MP E V W
Sbjct: 633 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 692
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + ++E A N E+ ++ ++T + Y + ++ M+ +G+
Sbjct: 693 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 752
Query: 182 E 182
+
Sbjct: 753 K 753
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 318/570 (55%), Gaps = 61/570 (10%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+F+ ++ +N L WTA+I GY +G ++++L+ M G P T+ ++ AC
Sbjct: 360 LFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACA 419
Query: 64 EVLDVSLGQQIHAQTIL---------LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ S G +IHA ++ GG DL V N +I MY KC +R +
Sbjct: 420 SLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI---- 475
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEY 172
F+++PL+++ V WT M+ G+ Q +A++
Sbjct: 476 ---------------------------FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 508
Query: 173 FERM--QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F M + GV + T+ ++ ACA L I+ + + V + LID
Sbjct: 509 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLID 568
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG +D A +F M Q++ S++SM+ G+ MHGR A+ +F M K P+ +T
Sbjct: 569 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 628
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ VL ACSH G+ YG++P +HYAC +DLL R+G L++A + V+ M
Sbjct: 629 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDM 688
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P+EP VW ALL AC++H N E+A+ A N L E+ + G+Y ++SNIYA+AG W DV+
Sbjct: 689 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 748
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
R+R L+K +G+KK PG SW++G +G F GD +HP S +I L L+DR++A GY
Sbjct: 749 RIRHLMKKSGIKKRPGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 807
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P L+DV +EEK +L+ HSEKLALA+GLLTTSPG +RI KNLR+C DCH
Sbjct: 808 PETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYI 867
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EIVVRD RFHHF++G CSCG YW
Sbjct: 868 SKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 50/394 (12%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----------RREGIGPVSF 53
++F+++ + + W +++ ++ + ++ L+ M R I
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI----I 273
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
++ + AC + V +++H I G F D++VGN +I Y KCG + + KVF+
Sbjct: 274 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFP-DVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPRE 168
M +DVVSW ++ Y+ +G+ E+A LF + PL D V WTA++ GY Q E
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHE 391
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIAEGSGF-GPIN 220
A+ F +M ++G + VT++ V+SACA LG Y+ C + + F G
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+++V +ALIDMYSKC S A IF + +++RNV +++ MI G A +G ++ A++LF +
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 279 MVKTE--TKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYA--------CMVDLLG 323
M+ PN T +L AC+H +G + + Y C++D+
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G ++ A + + M + + W +++ +H
Sbjct: 572 KCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 604
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 36/311 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ LV E+V W LIR +I QG L +I++ C M R G P FTL + KAC
Sbjct: 114 YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACG 173
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVV 120
E+ G H I GF S++++ N ++ MY +CG L + +FDE+ +R DV+
Sbjct: 174 ELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 232
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW ++ A+ + + +A LF+++ L + + KP ER
Sbjct: 233 SWNSIVSAHVKSSNAWTALDLFSKMTL-------------IVHEKPTN-----ER----- 269
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+D +++V ++ AC L + V A +G P +V VG+ALID Y+KCG +++
Sbjct: 270 --SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP--DVFVGNALIDAYAKCGLMEN 325
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT---- 296
A ++F M+ ++V S+++M+ G++ G AA +LF +M K + VT+ V+
Sbjct: 326 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 385
Query: 297 -ACSHVGLKCY 306
CSH L +
Sbjct: 386 RGCSHEALNLF 396
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT+++ GY + G +++ ++ MR+ G P T + AC+
Sbjct: 580 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 639
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G G T I + + G L + + +MP E V W
Sbjct: 640 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 699
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + ++E A N E+ ++ ++T + Y + ++ M+ +G+
Sbjct: 700 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 759
Query: 182 E 182
+
Sbjct: 760 K 760
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 323/561 (57%), Gaps = 53/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT-- 63
R VF++ + + ++W AL R + G K+ + LY M GI FT + + KAC
Sbjct: 133 RKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVS 192
Query: 64 --EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
V + G++IHA IL G+ ++++V T++ +Y K G
Sbjct: 193 ELSVSPLQKGKEIHAH-ILRHGYEANIHVMTTLLDVYAKFGS------------------ 233
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
V+YAN+ +F +P K+ V+W+AM+ + +N P +A+E F+ M
Sbjct: 234 -----VSYANS--------VFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAH 280
Query: 182 ET--DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ + VT+V V+ ACA L ++ + G I + V +ALI MY +CG I
Sbjct: 281 DSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSI--LPVLNALITMYGRCGEIL 338
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
R+F MK R+V S++S+I + MHG AIQ+F +M+ + P+ ++FI VL ACS
Sbjct: 339 MGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACS 398
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL Y + P +HYACMVDLLGRA L+EA+K++E M EP VW
Sbjct: 399 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVW 458
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LLG+C+IH N E+A+ A+ LFELEP GNY++L++IYA A MW + V +LL+
Sbjct: 459 GSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEAR 518
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GL+K PG SW+E R V + F + D +P EI L L + ++A GY P VLYD
Sbjct: 519 GLQKLPGCSWIEVKRKV-YSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYD 577
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +EEK+RI++ HSEKLA+AFGL+ T G T+RI KNLR+CEDCH S+ REI+
Sbjct: 578 LDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREIL 637
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSCG+YW
Sbjct: 638 VRDVNRFHHFKDGVCSCGDYW 658
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 44/296 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ +K N L +L +G G+LK +I L C P T L +C +
Sbjct: 42 LMNDIKGNNNQLIQSLCKG----GNLKQAIHLLCCEP----NPTQRTFEHLICSCAQQNS 93
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S G +H + ++ GF D ++ +I MY + G + +RKVFDE ER + W L
Sbjct: 94 LSDGLDVH-RRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFR 152
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A A M G +E ++ + +M + G+ +D T
Sbjct: 153 ALA----MVGCG---------------------------KELLDLYVQMNWIGIPSDRFT 181
Query: 188 LVGVISAC--AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ AC ++L V A G N+ V + L+D+Y+K GS+ A +F
Sbjct: 182 YTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVF 241
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS 299
M +N S+S+MI FA + A++LF M+ ++ PN VT + VL AC+
Sbjct: 242 CAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACA 297
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 21/224 (9%)
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +I +CAQ + V SGF + + + LI+MY + GSID A ++F
Sbjct: 80 TFEHLICSCAQQNSLSDGLDVHRRLVSSGFD--QDPFLATKLINMYYELGSIDRARKVFD 137
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------- 299
++R ++ ++++ AM G + L+ M + T+ VL AC
Sbjct: 138 ETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVS 197
Query: 300 --------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + +G + ++D+ + G + A + MP + N W A++
Sbjct: 198 PLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSAMI 256
Query: 352 GACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIY-ASAGM 393
AC + + L LE D + N + + N+ A AG+
Sbjct: 257 -ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGL 299
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 322/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G+ K+++ L+ M + + P T+ + AC +
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I G S+L + N +I +Y KCG
Sbjct: 251 IQLGRQVHSW-IDDHGLGSNLKIVNALIDLYSKCG------------------------- 284
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W M+ GY +EA+ F+ M +G + VT
Sbjct: 285 ------EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVT 338
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACAQLG I + W+ + G N + ++LIDMY+KCG I+ A+++F
Sbjct: 339 MLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 398
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R + + ++MI GFAMHGRA+AA +F M K +P+ +TF+G+L+ACSH G+
Sbjct: 399 MHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 459 RRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACK 518
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+ + A L ++EP+ G+Y++LSNIYA+AG W++V+ +R LL G+KK PG
Sbjct: 519 MHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGC 578
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 579 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQG 637
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 698 HFRDGVCSCNDYW 710
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 213/409 (52%), Gaps = 18/409 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W + RG+ L +I LY M G+ P S+T L K+C ++
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG + DLYV ++I MYVK G + KVFD RDVVS+T LI
Sbjct: 119 SKEGQQIHGHVLKLG-YELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALIT 177
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G +ESA +F+E+P+KD V+W A+++GY +EA++ F+ M V+ D T
Sbjct: 178 GYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDEST 237
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ G I+ V + G G +N+ + +ALID+YSKCG ++ A +F G
Sbjct: 238 MVTVVSACAQSGSIQLGRQVHSWIDDHGLG--SNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S+++MI G+ A+ LF +M+++ PN VT + +L AC+ +G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG-A 353
+ GV+ ++ ++D+ + G +E A ++ M + G A
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
N + +EPD I ++ L + + +GM D R+ R
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDI-TFVGLLSACSHSGMLDLGRRIFR 463
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 278/438 (63%), Gaps = 15/438 (3%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T L Y+ ++ESA LF+E K +W AM++GY QN +AI F+ MQ V
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVR 406
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT+ ++SACAQLG + WV ++ F +N+ V +ALIDMY+KCGSI +A
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRESFE--SNIFVSTALIDMYAKCGSITEAQ 464
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M ++N ++++MI G+ +HG H A+ LF +M+ + P GVTF+ VL ACSH G
Sbjct: 465 RLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAG 524
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +G P +HYACMVDLLGRAG L++AL + KMPVEP VWGAL
Sbjct: 525 LVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGAL 584
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC IH++ +A++A++ LFEL+P +G Y++LSNIY++ + + + VR ++K L
Sbjct: 585 LGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLA 644
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG + +E +H F +GD +HP +T I L L +++ G+Q + L+DV +
Sbjct: 645 KTPGCTLIE-VANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEE 703
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ ++ HSEKLA+AFGL+T+ PG +RI+KNLR+C DCH S++ R IVVRD
Sbjct: 704 EEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRD 763
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 764 ANRFHHFKDGICSCGDYW 781
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 46/363 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ LW ++ G + ++I ++ M + GIG S T++A+ E+
Sbjct: 161 RKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAEL 220
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D++LG I + + GF S YV + +Y KCG + +R +F ++ + D+VS+ +
Sbjct: 221 QDLALGMGIQCLAMKV-GFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAM 279
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y N + ES+ LF EL +V+G N+ +
Sbjct: 280 ISGYTCNNETESSVRLFKEL----------LVSGEKVNS------------------SSI 311
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V L+ V L + + + C + G ++N V +AL +YS+ I+ A +F
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFC-----TKSGVVSNSSVSTALTTVYSRLNEIESARLLF 366
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
++++ S+++MI G+A +G AI LF +M K E +PN VT +L+AC+ +G
Sbjct: 367 DESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALS 426
Query: 306 YGV---------SPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G S ++ + ++D+ + G + EA ++ MP E N W A++
Sbjct: 427 LGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGY 485
Query: 355 QIH 357
+H
Sbjct: 486 GLH 488
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 180/452 (39%), Gaps = 97/452 (21%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEV 65
L+F + + FL+ LIR + L ++SLY +R+ + P +FT + + + +
Sbjct: 63 LLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSL 122
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L ++ GF SDL+VG+ ++ Y K + +RKVFD M ERD V
Sbjct: 123 GLGLLLHAHS----IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTV----- 173
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W MV+G V+N+ EAI F M G+ D
Sbjct: 174 --------------------------LWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDS 207
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ V+ A+L + + +A GF V+ G A +YSKCG I+ A +F
Sbjct: 208 TTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC--LYSKCGEIETARLLF 265
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV----------- 294
+ Q ++ SY++MI G+ + ++++LF +++ + K N + +G+
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325
Query: 295 LTACSH---------------VGLKCY----------------GVSPSTDHYACMVDLLG 323
LT C H L S + M+
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385
Query: 324 RAGCLEEALKMVEKM---PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
+ G E+A+ + ++M V PN ++L AC AQ+ A L + D I
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSAC--------AQLGALSLGKWVHDLINR 437
Query: 381 YIILSNIYASAGMWD------DVSRVRRLLKM 406
SNI+ S + D ++ +RL M
Sbjct: 438 ESFESNIFVSTALIDMYAKCGSITEAQRLFSM 469
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 35/237 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F++ K+ W A+I GY G + +ISL+ M++ + P T++++ AC ++
Sbjct: 363 RLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQL 422
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+SLG+ +H I F S+++V +I MY KCG + ++++F MPE++ V+W +
Sbjct: 423 GALSLGKWVH-DLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAM 481
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y +G A LFNE+ L +V+ T
Sbjct: 482 ISGYGLHGYGHEALNLFNEM-LHSRVSPTG------------------------------ 510
Query: 186 VTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT + V+ AC+ G+++ + + + GF P+ + ++D+ + G++D A
Sbjct: 511 VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY--ACMVDLLGRAGNLDKA 565
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+V+ T+L ++ ++ A LF+ +P D + ++ + N P A+ + ++
Sbjct: 41 DLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLR 100
Query: 178 YAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ +E D T VIS + LG+ + +A GFG +++ VGSA++ Y K
Sbjct: 101 KSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA---GFG--SDLFVGSAIVACYFKFS 155
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+ A ++F GM +R+ +++M+ G + AI +FGDMVK + T VL
Sbjct: 156 RVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 318/558 (56%), Gaps = 18/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + W A+I GY+ G +++++L MR GI T + + AC V
Sbjct: 243 REVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANV 302
Query: 66 LDVSLGQQIHAQTI---LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+G+Q+HA + L + L V N +I +Y K + +RK+F MP R++++W
Sbjct: 303 GSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITW 362
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y N G ME A F E+P+K+ + T M++G QN E ++ F++M+ G E
Sbjct: 363 NAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
G ++AC+ LG ++ + A+ G +++ VG+A+I MY+KCG ++ A
Sbjct: 423 PCDFAFAGALTACSVLGALENGRQL--HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAE 480
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+FV M ++ S++SMI HG AI+LF M+K P+ +TF+ VLTACSH G
Sbjct: 481 SVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YG++P DHYA MVDL RAG A +++ MP +P VW AL
Sbjct: 541 LVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEAL 600
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+IH N ++ AA LF+L P G Y++LSNIYA G W++V++VR+L++ ++
Sbjct: 601 LAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVR 660
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K P SW+E + V H F D HP + + L L ++ GY P+ + VL+D+
Sbjct: 661 KEPACSWIEVENKV-HVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEY 719
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+ L THSEKLA+ FG++ PGATVR+ KN+RIC DCH S+V REI+VRD
Sbjct: 720 EQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 779
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 780 RKRFHHFKNGDCSCRDYW 797
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 174/398 (43%), Gaps = 58/398 (14%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ- 73
++ + A+I GY G ++ L+ +MRR+ P FT +++ A VL V QQ
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL--VLFVGNEQQC 167
Query: 74 --IHAQTILLGGFTSDLYVGNTMIGMYVK--------CGFLGCSRKVFDEMPERDVVSWT 123
+H + G V N ++ +YVK C + +RK+FDEMP+RD ++WT
Sbjct: 168 GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWT 227
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y N D+ A +F + AW AM++GYV +EA+ +M++ G++
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQF 287
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN--VVVGSALIDMYSKCGSIDDA 241
D +T +ISACA +G + V + P ++ + V +ALI +Y K +D+A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAA----------------------------- 272
+IF M RN+ ++++++ G+ GR A
Sbjct: 348 RKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGD 407
Query: 273 --IQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
++LF M +P F G LTACS H L G S M+
Sbjct: 408 EGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMI 467
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ + G +E A + MP + W +++ A H
Sbjct: 468 SMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 85/410 (20%)
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
SL + +HA I GF + N ++ MY K L +R++F+E+P D ++ T LI A
Sbjct: 30 SLARAVHAHMIA-SGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITA 88
Query: 129 YANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y G++E +FN PL +D V + AM+TGY N A+E F M+ D
Sbjct: 89 YCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 187 TLVGVISA----------CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK-- 234
T V+SA C Q+ C + + +G G +++ V+ +AL+ +Y K
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMH--------CAVVK-TGMGCVSSSVL-NALLSVYVKRA 198
Query: 235 ------CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT------ 282
C ++ A ++F M +R+ ++++MI G+ + + A ++F MV+
Sbjct: 199 SELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258
Query: 283 -------------------------ETKPNGVTFIGVLTACSHVGLKCYGVSP------- 310
+ + +T+ +++AC++VG G
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN 318
Query: 311 --STDHYAC------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPE 361
+ +H C ++ L + ++EA K+ MPV N W A+L G R E
Sbjct: 319 ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEE 377
Query: 362 IAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
A FE P K + ++ + A G D+ ++ + +++ G +
Sbjct: 378 -----AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 321/557 (57%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A + +L+G D+++ + R EG P T A AC
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA 222
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q+H +L GF +D+ V N +I Y KC +GCS +F + +
Sbjct: 223 SYLRLGRQLHG-FVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISK--------- 272
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ V+W +M+ YVQN + +A F R + G+E
Sbjct: 273 ----------------------PNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTD 310
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ V+SACA L V++ V +A + + N+ VGSAL+DMY KCGSI+DA R F
Sbjct: 311 FMVSSVLSACAGLSVLEVGKSVHTLAVKACV--VGNIFVGSALVDMYGKCGSIEDAERAF 368
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS---- 299
M +RN+ ++++MI G+A G+A A+ LF +M PN VTF+ VL+ACS
Sbjct: 369 DEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS 428
Query: 300 -HVGLKC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+VG++ YG+ P +HYAC+VDLLGRAG +E+A + ++KMP+ P VWGALL
Sbjct: 429 VNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA ++ E+ ++AA++LFEL+P GN+++LSN++A+AG W++ + VR+ +K G+KK
Sbjct: 489 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKK 548
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+ V H F+A D +H ++EIQ L L ++A GY P+ L+D+ +E
Sbjct: 549 GAGCSWITAGNAV-HVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEE 607
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK + HSEK+ALAFGL++ G +RI KNLRIC DCH + S ++GREI+VRDN
Sbjct: 608 EKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDN 667
Query: 532 MRFHHFQDGKCSCGNYW 548
FH F+D +CSC +YW
Sbjct: 668 NLFHRFRDNQCSCRDYW 684
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 159/360 (44%), Gaps = 50/360 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+ ++ WTALI G + G ++ + +MRR+ I P FT FKA +
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+Q+HA + G SD++VG + MY K G +RK+FDEMPER++ +W
Sbjct: 122 RSPLVGKQVHALAVKAGQI-SDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWN-- 178
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AY +N +E + +A+ F ++ G E +
Sbjct: 179 --AYLSNSVLE---------------------------GRYDDALTAFIEFRHEGWEPNL 209
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T ++ACA ++ + SGF +V V + LID Y KC + + IF
Sbjct: 210 ITFCAFLNACAGASYLRLGRQLHGFVLQSGFEA--DVSVANGLIDFYGKCHQVGCSEIIF 267
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
G+ + N S+ SMI+ + + A +F K +P VL+AC+ GL
Sbjct: 268 SGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA--GLSV 325
Query: 306 YGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
V S A +VD+ G+ G +E+A + ++MP E N W A++G
Sbjct: 326 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMIG 384
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ L+ Y+ SA L + P + V WTA++ G VQN + A+ +F M+ +
Sbjct: 45 YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI 104
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + T A L V +A +G I++V VG + DMYSK G ++A
Sbjct: 105 QPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG--QISDVFVGCSAFDMYSKAGLTEEA 162
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
++F M +RN+ ++++ + + GR A+ F + +PN +TF L AC+
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACA 220
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 296/488 (60%), Gaps = 16/488 (3%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
+HA + L G D +V + + MY G +G +R F E+ DVV T ++ A A
Sbjct: 223 SVHA-SALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATG 281
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G+ ++A LF+ +P +D VAW AM+ GYV + REA+ F+ M++AG VTLV +
Sbjct: 282 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 341
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ACAQLG ++ WV A G +V +G+ALIDMYSKCG++ A +F M +RN
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRL--SVTLGTALIDMYSKCGAVAAAMEVFDSMGERN 399
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCY- 306
V++++S + G AM+G + LF M T +PNGVTF+ VL CS GL C+
Sbjct: 400 VYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFD 459
Query: 307 ------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
G+ P +HY CMVDL GRAG L++A+ + MP+EP+ GVWGALL A +IH+N
Sbjct: 460 SMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNV 519
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ + A + L +E +++LSNIYA + W VS VR ++K G+KK PG S +E
Sbjct: 520 ELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEV 579
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
G +HEF G THP EI+ L ++ RL+ GY N + VL+D+ +E+K+ + H
Sbjct: 580 G-GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLH 638
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SEKLA+AFGL+ +RI+KNLR+CEDCH + S+V REIV+RD RFHHF+DG
Sbjct: 639 SEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDG 698
Query: 541 KCSCGNYW 548
CSC +YW
Sbjct: 699 ACSCKDYW 706
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A+I GY+ G ++++ L+ MR G TL + AC ++
Sbjct: 288 RELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQL 347
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ G + +G +I MY KCG + + +VFD M ER+V +W
Sbjct: 348 GALERGKWVHS-CAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTW--- 403
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T+ V+G N R+ + F+RM+ GVE +
Sbjct: 404 ----------------------------TSAVSGLAMNGMGRDCLALFKRMESTGVEPNG 435
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V V+ C+ G++ C + S G + ++D+Y + G +DDA
Sbjct: 436 VTFVVVLRGCSMAGLVDEGR-ACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFI 494
Query: 246 VGM 248
GM
Sbjct: 495 NGM 497
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 296/488 (60%), Gaps = 16/488 (3%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
+HA + L G D +V + + MY G +G +R F E+ DVV T ++ A A
Sbjct: 223 SVHA-SALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATG 281
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G+ ++A LF+ +P +D VAW AM+ GYV + REA+ F+ M++AG VTLV +
Sbjct: 282 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 341
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ACAQLG ++ WV A G +V +G+ALIDMYSKCG++ A +F M +RN
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRL--SVTLGTALIDMYSKCGAVAAAMEVFDSMGERN 399
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCY- 306
V++++S + G AM+G + LF M T +PNGVTF+ VL CS GL C+
Sbjct: 400 VYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFD 459
Query: 307 ------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
G+ P +HY CMVDL GRAG L++A+ + MP+EP+ GVWGALL A +IH+N
Sbjct: 460 SMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNV 519
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ + A + L +E +++LSNIYA + W VS VR ++K G+KK PG S +E
Sbjct: 520 ELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEV 579
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
G +HEF G THP EI+ L ++ RL+ GY N + VL+D+ +E+K+ + H
Sbjct: 580 G-GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLH 638
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SEKLA+AFGL+ +RI+KNLR+CEDCH + S+V REIV+RD RFHHF+DG
Sbjct: 639 SEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDG 698
Query: 541 KCSCGNYW 548
CSC +YW
Sbjct: 699 ACSCKDYW 706
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A+I GY+ G ++++ L+ MR G TL + AC ++
Sbjct: 288 RELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQL 347
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ G + +G +I MY KCG + + +VFD M ER+V +W
Sbjct: 348 GALERGKWVHS-CAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTW--- 403
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T+ V+G N R+ + F+RM+ GVE +
Sbjct: 404 ----------------------------TSAVSGLAMNGMGRDCLALFKRMESTGVEPNG 435
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V V+ C+ G++ C + S G + ++D+Y + G +DDA
Sbjct: 436 VTFVVVLRGCSMAGLVDEGR-ACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFI 494
Query: 246 VGM 248
GM
Sbjct: 495 NGM 497
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 325/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N W A+I GY G+ ++++L+ M +EG+ ++ A +AC E+
Sbjct: 174 RAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGEL 233
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +++H + ++ G +S++ V N +I Y KC + +VF+E+ +
Sbjct: 234 GYLDEVRRVH-ELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNK-------- 284
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
K +++W AM+ G+ QN P +A F RMQ V D
Sbjct: 285 ----------------------KTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDS 322
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLV VI A A + A W+ + +V V +ALIDMYSKCG + A R+F
Sbjct: 323 FTLVSVIPAVADISDPLQARWIHGYSIRHQLD--QDVYVLTALIDMYSKCGRVSIARRLF 380
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ R+V ++++MI G+ HG AA++LF +M T + PN TF+ VL ACSH GL
Sbjct: 381 DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 440
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K YG+ P +HY MVDLLGRAG L+EA ++ MP+EP V+GA+LGA
Sbjct: 441 EGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N E+A+ +A +FEL P++ +++L+NIYA+A MW DV+RVR ++ GL+K P
Sbjct: 501 CKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTP 560
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+S ++ + +H F +G H ++ +I L L++ ++ GY P+ S+ +DV D+ K
Sbjct: 561 GWSIIQL-KNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVK 618
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++L THSEKLA+A+GL+ T+PG T++I KNLR+C DCH S + GREI++RD R
Sbjct: 619 AQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQR 678
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG+YW
Sbjct: 679 FHHFKDGKCSCGDYW 693
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 118/256 (46%), Gaps = 36/256 (14%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
GPV T +AL K C D++ G+ +HAQ + G S+ + MY KC +R
Sbjct: 13 GPVLRTFTALLKLCAARADLATGRAVHAQ-LEARGLASESIASTALANMYFKCRRPADAR 71
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+VFD MP R D+VAW A+V GY +N P
Sbjct: 72 RVFDRMPSR-------------------------------DRVAWNAVVAGYARNGLPSS 100
Query: 169 AIEYFERMQ--YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
A+E RMQ G D VTLV V+ ACA + V A +G + NV +
Sbjct: 101 AMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNV--ST 158
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
A++D Y KCG+++ A +F M RN S+++MI G+A +G A A+ LF MV+
Sbjct: 159 AVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDV 218
Query: 287 NGVTFIGVLTACSHVG 302
+ + L AC +G
Sbjct: 219 TDASVLAALQACGELG 234
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 37/299 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACT 63
R VF+++ ++ W A++ GY G ++ M+ E G P S TL ++ AC
Sbjct: 71 RRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACA 130
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + +++HA L G + V ++ Y KCG +
Sbjct: 131 DARALHACREVHA-FALRAGLDELVNVSTAVLDAYCKCGAV------------------- 170
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
E+A +F+ +P+++ V+W AM+ GY N EA+ F RM GV+
Sbjct: 171 ------------EAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDV 218
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+++ + AC +LG + V E+ G +NV V +ALI Y+KC D A +
Sbjct: 219 TDASVLAALQACGELGYLDEVRRVHELLVRVGLS--SNVSVTNALITTYAKCKRADLAAQ 276
Query: 244 IFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F + ++ S+++MILGF + A +LF M +P+ T + V+ A + +
Sbjct: 277 VFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADI 335
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/554 (38%), Positives = 310/554 (55%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT+LI GY +++ L M R P FT ++L KA
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+QIHA T+ + D+YVG+ ++ MY +CG
Sbjct: 179 ASSGIGEQIHALTVKYD-WHDDVYVGSALLDMYARCG----------------------- 214
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F++L K+ V+W A++ G+ + + F MQ G E +
Sbjct: 215 --------RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V SA A +G ++ WV A G + VG+ ++DMY+K GS+ DA ++F
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVH--AHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +++V +++SM+ FA +G A+ F +M K N +TF+ +LTACSH GL
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK 384
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y + P DHY +VDLLGRAG L +AL + KMP++P VWGALLG+C
Sbjct: 385 EGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N +I Q AA+H+FEL+PD G ++L NIYAS G WD +RVR+++K TG+KK P
Sbjct: 445 RMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPA 504
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP S EI + ++ +++ GY PN VL V ++E++
Sbjct: 505 CSWVEIENSV-HMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQ 563
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF L+ GAT+RIMKN+RIC DCH S+V REIVVRD RF
Sbjct: 564 AKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRF 623
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSCG+YW
Sbjct: 624 HHFSSGSCSCGDYW 637
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 58/258 (22%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGG-FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+L AC + + IHA L G F +++ N++I +Y KCG + +R+VFD M
Sbjct: 69 SLITACARYRSLDDARAIHAH--LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
P +D +WT+++ GY QN P EA+
Sbjct: 126 ------------------------------PARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 176 MQYAGVETD---YVTLVGVISACAQLGV--------IKYANWVCEIAEGSGFGPINNVVV 224
M + + + +L+ A A G+ +KY +W ++V V
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKY-DWH------------DDVYV 202
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
GSAL+DMY++CG +D A +F ++ +N S++++I GFA G + +F +M +
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262
Query: 285 KPNGVTFIGVLTACSHVG 302
+ T+ V +A + +G
Sbjct: 263 EATHFTYSSVFSAIAGIG 280
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
R+ ++ + + A Y +L I+ACA+ + A + GS F +V + +
Sbjct: 49 RDTLDSVDARELAATPRLYHSL---ITACARYRSLDDARAIHAHLAGSQFA--GSVFLDN 103
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+LI +Y KCG++ DA R+F GM R++ S++S+I G+A + A+ L M++ KP
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 287 NGVTFIGVL-----TACSHVGLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMV 335
NG TF +L +A S +G + + ++ D + + ++D+ R G ++ A+ +
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223
Query: 336 EKMPVEPNGGVWGALLG 352
+++ + NG W AL+
Sbjct: 224 DQLESK-NGVSWNALIA 239
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 324/554 (58%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VF+ + ++ WT++I GY G +++ ++ MR G+ P L ++ +A T+V
Sbjct: 209 KVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDV 268
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH I +G + + ++ Y KCG + ++ FD+M +V
Sbjct: 269 DDLEQGRSIHGFVIKMG-LEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNV------ 321
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ W AM++GY +N EA+ F M ++ D
Sbjct: 322 -------------------------IMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDS 356
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ + A AQ+G ++ A W+ + S +G +++ V ++LIDMY+KCGS++ A R+F
Sbjct: 357 VTVRSAVLASAQVGSLELAQWMDDYVSKSNYG--SDIFVNTSLIDMYAKCGSVEFARRVF 414
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++V +S+MI+G+ +HG+ AI L+ M + PN VTFIG+LTAC+H GL
Sbjct: 415 DRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVK 474
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K + + P +HY+C+VDLLGRAG L EA + K+P+EP VWGALL AC
Sbjct: 475 EGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSAC 534
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+I+R + + AAN LF L+P G+Y+ LSN+YAS+ +WD V+ VR L++ GL K+ G
Sbjct: 535 KIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLG 594
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
YS +E + G + F GD +HP + EI L L RL+ G+ P SVL+D++ EEK+
Sbjct: 595 YSVIEIN-GKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKE 653
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSE++A+A+GL++T+PG T+RI KNLR C +CH + S+++ REI+VRD RF
Sbjct: 654 ENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRF 713
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSCG+YW
Sbjct: 714 HHFKDGLCSCGDYW 727
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 50/367 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F++ Y + F+W A+IR Y +D++ +Y MR G+ P FT + KACT
Sbjct: 106 YARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACT 165
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
E+LD L IH Q I+ GF SD++V N ++ +Y KCG +G ++ VFD + R +VSWT
Sbjct: 166 ELLDFGLSCIIHGQ-IIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWT 224
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA NG K EA+ F +M+ GV+
Sbjct: 225 SIISGYAQNG-------------------------------KAVEALRMFSQMRNNGVKP 253
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D++ LV ++ A + ++ + G +++ +L Y+KCG + A
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLI--SLTAFYAKCGLVTVAKS 311
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F MK NV +++MI G+A +G A A+ LF M+ KP+ VT + A + VG
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG- 370
Query: 304 KCYGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
++ D Y ++D+ + G +E A ++ ++ + + +W A+
Sbjct: 371 -SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNS-DKDVVMWSAM 428
Query: 351 LGACQIH 357
+ +H
Sbjct: 429 IMGYGLH 435
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 32/213 (15%)
Query: 108 RKVFDEMPERDVVS--------WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
++ D++ R V+S T+L+ +N G + A LF+E D W A++
Sbjct: 69 KRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRS 128
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL-----------GVIKYANWVC 208
Y +N R+ +E + M++ GV D T V+ AC +L +IKY
Sbjct: 129 YSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKY----- 183
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
GFG ++V V + L+ +Y+KCG I A +F G+ R + S++S+I G+A +G+
Sbjct: 184 ------GFG--SDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGK 235
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
A A+++F M KP+ + + +L A + V
Sbjct: 236 AVEALRMFSQMRNNGVKPDWIALVSILRAYTDV 268
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF++ K+ +W+A+I GY L G ++I+LY M++ G+ P T L AC
Sbjct: 409 FARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACN 468
Query: 64 E 64
Sbjct: 469 H 469
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 329/555 (59%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ +K ++ WT +I GY G+++D+ L+ +M+ EGI P T + AC
Sbjct: 314 RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAIS 373
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++ ++IH+Q + + GF +DL V ++ MY KCG + +R+
Sbjct: 374 ANLNHAREIHSQ-VDIAGFGTDLLVSTALVHMYAKCGAIKDARQ---------------- 416
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+F+ +P +D V+W+AM+ YV+N EA E F M+ + +E D
Sbjct: 417 ---------------VFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDG 461
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + +++AC LG + + A + +++V +G+ALI M +K GS++ A IF
Sbjct: 462 VTYINLLNACGHLGALDVGMEIYTQAIKADL--VSHVPLGNALIIMNAKHGSVERARYIF 519
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +R+V ++++MI G+++HG A A+ LF M+K +PN VTF+GVL+ACS G
Sbjct: 520 DTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVD 579
Query: 303 ---------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
L+ G+ P+ Y CMVDLLGRAG L+EA +++ MPV+P +W +LL A
Sbjct: 580 EGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N ++A+ AA ++P Y+ LS++YA+AGMW++V++VR++++ G++K
Sbjct: 640 CRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQ 699
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G +W+E G +H F D +HP EI L L++ ++ +GY P ++VL+DV +++K
Sbjct: 700 GCTWIE-VAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQK 758
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+A+G+L+ G +RI KNLR+C DCH S+V GREI+ RD R
Sbjct: 759 EEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASR 818
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 819 FHHFKDGVCSCGDYW 833
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 183/369 (49%), Gaps = 46/369 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ + ++ GY G + + L+ M++ G+ P + ++ C
Sbjct: 213 RQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTP 272
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ +HAQ + G D+ V ++I MY CG + +R+VFD M RDVVSWT +
Sbjct: 273 EALAWGKAVHAQC-MNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVM 331
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG++E A GL F MQ G++ D
Sbjct: 332 IEGYAENGNIEDAFGL-------------------------------FATMQEEGIQPDR 360
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T + +++ACA + +A + + +GFG +++V +AL+ MY+KCG+I DA ++F
Sbjct: 361 ITYMHIMNACAISANLNHAREIHSQVDIAGFG--TDLLVSTALVHMYAKCGAIKDARQVF 418
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH----- 300
M +R+V S+S+MI + +G A + F M ++ +P+GVT+I +L AC H
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALD 478
Query: 301 VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
VG++ Y + D + ++ + + G +E A + + M V + W A++G
Sbjct: 479 VGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGY 537
Query: 355 QIHRNPEIA 363
+H N A
Sbjct: 538 SLHGNAREA 546
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 193/404 (47%), Gaps = 51/404 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ V+ K W ALI GY GH+K++ +L+ M EG+ P T ++ AC+
Sbjct: 112 RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP 171
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+++HAQ ++ GF SD +G ++ MYVK G + +R+VFD + RDV ++ +
Sbjct: 172 AGLNWGKEVHAQ-VVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA +GD E +A E F RMQ G++ +
Sbjct: 231 VGGYAKSGDWE-------------------------------KAFELFYRMQQVGLKPNK 259
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ + ++ C + + V A+ G ++++ V ++LI MY+ CGSI+ A R+F
Sbjct: 260 ISFLSILDGCWTPEALAWGKAVH--AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVF 317
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
MK R+V S++ MI G+A +G A LF M + +P+ +T++ ++ AC+
Sbjct: 318 DNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLN 377
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G +V + + G +++A ++ + MP + W A++GA
Sbjct: 378 HAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAMIGA- 435
Query: 355 QIHRNPEIAQIAANHLFE---LEPDKIGNYIILSNIYASAGMWD 395
+ HL + +EPD + YI L N G D
Sbjct: 436 YVENGYGTEAFETFHLMKRSNIEPDGV-TYINLLNACGHLGALD 478
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 36/248 (14%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
S T LF+ CTE+ D +LG+Q+ I+ GG ++Y NT+I +Y CG + +R++F
Sbjct: 57 SRTYVKLFQRCTELRDAALGKQVRDH-IIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
D + + V V W A++ GY Q +EA
Sbjct: 116 DSVENKTV-------------------------------VTWNALIAGYAQVGHVKEAFA 144
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALID 230
F +M G+E +T + V+ AC+ + NW E+ A+ G +++ +G+AL+
Sbjct: 145 LFRQMVDEGLEPSIITFLSVLDACSSPAGL---NWGKEVHAQVVTAGFVSDFRIGTALVS 201
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY K GS+DDA ++F G+ R+V +++ M+ G+A G A +LF M + KPN ++
Sbjct: 202 MYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKIS 261
Query: 291 FIGVLTAC 298
F+ +L C
Sbjct: 262 FLSILDGC 269
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 55/333 (16%)
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSA 227
A + +R+ G D T V + C +L V + I +G G N+ +
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQG---GRQLNIYELNT 97
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI +YS CG++ +A +IF ++ + V +++++I G+A G A LF MV +P+
Sbjct: 98 LIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157
Query: 288 GVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+TF+ VL ACS H + G +V + + G +++A ++ +
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYA- 389
+ + + + ++G + E A LF L+P+KI IL +
Sbjct: 218 GLHIR-DVSTFNVMVGGYAKSGDWE----KAFELFYRMQQVGLKPNKISFLSILDGCWTP 272
Query: 390 --------------SAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT- 434
+AG+ DD+ L++M + +EG R V + D+
Sbjct: 273 EALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGS-----IEGARRVFDNMKVRDVVS 327
Query: 435 -------HPNSTEIQQALGDLLDRLQADGYQPN 460
+ + I+ A G L +Q +G QP+
Sbjct: 328 WTVMIEGYAENGNIEDAFG-LFATMQEEGIQPD 359
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 314/566 (55%), Gaps = 52/566 (9%)
Query: 1 MDSFP---RLVF--EQVKYKNPFLWTALIRGYILQGHLK-DSISLYCSMRREGIGPVSFT 54
+D+ P LVF E + + FL++ +IR Y K ++I Y M GI P +
Sbjct: 52 LDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYA 111
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ KAC + D++LG+ +H + G F D++V NTM+ MY C
Sbjct: 112 FPFVLKACAGLRDLNLGKAVHGSLVKFG-FDDDIFVQNTMVHMYCCC------------- 157
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
+G ME A LF+E+P D V WTAM+ GY + + A+ F
Sbjct: 158 -----------------SGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFR 200
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+MQ AGV D VT+V V+SAC LG ++ W+ E + V + +AL+DM++K
Sbjct: 201 KMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERV--LKTVELSNALVDMFAK 258
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG +D A +F M +R + S++S+I+G AMHGR A+ LF +M + P + FIG+
Sbjct: 259 CGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGL 318
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L+ACSH GL + +G+ P +HY CMVDLL RAG + EAL+ VE+MP+EP
Sbjct: 319 LSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEP 378
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
N +W L+ AC++H ++ + + L EP NY++LSNIY W+ S++R
Sbjct: 379 NPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRV 438
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
+ G++K PG + +E D IHEF GD +H EI + + ++ ++ GY P
Sbjct: 439 AMGKKGIQKVPGSTMIELDNE-IHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTT 497
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
V D+ +E+K+ L HSEKLA+AF LL T PG+ +RI KNLR+C DCH S++
Sbjct: 498 EVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIY 557
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
REIV+RD RFHHF+DG+CSCG++W
Sbjct: 558 NREIVMRDRSRFHHFRDGQCSCGDFW 583
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 320/553 (57%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W+ ++ G+ G + + + R G P ++TL + +AC ++ +
Sbjct: 792 LFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 851
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH + G D +V ++ MY KC
Sbjct: 852 LQMGRLIH-HIVYKFGLDLDHFVCAALVDMYGKCR------------------------- 885
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E A LF+++ +D V WT M+ GY + E++ F++M+ GV D V
Sbjct: 886 ------EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 939
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ ACA+LG + A + + + F +V++G+A+IDM++KCG ++ A IF
Sbjct: 940 MVTVVFACAKLGAMHKARTIDDYIQRKKFQL--DVILGTAMIDMHAKCGCVESAREIFDR 997
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++NV S+S+MI + HG+ A+ LF M+++ PN +T + +L ACSH GL
Sbjct: 998 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 1057
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V HY C+VDLLGRAG L+EALK++ M E + G+WGA LGAC+
Sbjct: 1058 LRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACR 1117
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H++ +A+ AA L EL+P G+YI+LSNIYA+AG W+DV+++R L+ LKK PG+
Sbjct: 1118 THKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGW 1177
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
+W+E D H+F GD THP S EI + L L ++L+ GY P+ VL+DV +E K
Sbjct: 1178 TWIEVDNKS-HQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIG 1236
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL THSEKLA+AFGL+ T +RI+KNLR+C DCH F S + GR I+VRD RFH
Sbjct: 1237 ILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFH 1296
Query: 536 HFQDGKCSCGNYW 548
HF++G CSCG+YW
Sbjct: 1297 HFKEGACSCGDYW 1309
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 291/511 (56%), Gaps = 47/511 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W+ ++ G+ G + + + R G P ++TL + +AC ++ +
Sbjct: 116 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 175
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH + G D +V ++ MYVKC
Sbjct: 176 LQMGRLIH-HIVYKFGLDLDHFVCAALVDMYVKCR------------------------- 209
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E A LF+++ +D V WT M+ GY + K E++ FE+M+ GV D V
Sbjct: 210 ------EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 263
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ ACA+LG + A + + + F +V++G+A+IDMY+KCG ++ A IF
Sbjct: 264 MVTVVFACAKLGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCVESAREIFDR 321
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M+++NV S+S+MI + HG+ A+ LF M+ + P+ +T +L ACSH GL
Sbjct: 322 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEG 381
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y V HY C+VDLLGRAG L+EALK+++ M +E + G+WGA LGAC+
Sbjct: 382 LRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACR 441
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H++ +A+ AA L EL+ G+Y++LSNIYA+AG W+DV+++R L+ LKK PG+
Sbjct: 442 THKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGW 501
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
+W+E D H+F GD THP S EI + L L ++L+ GY P+ VL+DV +E K
Sbjct: 502 TWIEVDNKS-HQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIG 560
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLR 506
IL THSEKLA+AFGL+ T +RI+KNLR
Sbjct: 561 ILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 182/429 (42%), Gaps = 67/429 (15%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
++V +LI Y+ ++ A GLF+ + ++D V+W+ MV G+ + F +
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G D TL VI AC L ++ + I FG + V +AL+DMY KC
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV--YKFGLDLDHFVCAALVDMYVKCRE 210
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+DA +F M++R++ +++ MI G+A G+A+ ++ LF M + P+ V + V+ A
Sbjct: 211 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 270
Query: 298 CSHVGLKCYGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C+ +G + D Y M+D+ + GC+E A ++ ++M E N
Sbjct: 271 CAKLG--AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNV 327
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYAS------------ 390
W A++ A H A + + PDKI + S +YA
Sbjct: 328 ISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKI---TLASLLYACSHAGLVEEGLRF 384
Query: 391 -AGMWDDVS----------------RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
+ MW+D S R RL + L K+ +E D G+ F
Sbjct: 385 FSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT---IEKDEGLWGAFLGACR 441
Query: 434 THPNSTEIQQALGDLLD-RLQADGYQPNLRSVLYDV---SDEEKKRILMTHSEKLALAFG 489
TH + ++A LL+ + Q G+ L ++ + D K R LM+
Sbjct: 442 THKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRR------- 494
Query: 490 LLTTSPGAT 498
L +PG T
Sbjct: 495 -LKKTPGWT 502
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
++++ +L+ Y+ ++ A GLF+ + ++D V+W+ MV G+ + F +
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
G D TL VI AC L ++ + I FG + V +AL+DMY KC
Sbjct: 828 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV--YKFGLDLDHFVCAALVDMYGKCR 885
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
I+DA +F M +R++ +++ MI G+A G A+ ++ LF M + P+ V + V+
Sbjct: 886 EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 945
Query: 297 ACSHVGLKCYGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPN 343
AC+ +G + + D Y M+D+ + GC+E A ++ ++M E N
Sbjct: 946 ACAKLG--AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKN 1002
Query: 344 GGVWGALLGACQIH 357
W A++ A H
Sbjct: 1003 VISWSAMIAAYGYH 1016
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ ++ WT +I GY G +S+ L+ MR EG+ P + + AC +
Sbjct: 215 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK- 273
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +I I F D+ +G MI MY KCG + +R++FD M E++V+SW+ +
Sbjct: 274 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 333
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AY +G + R+A++ F M +G+ D
Sbjct: 334 IAAYGYHG-------------------------------QGRKALDLFPMMLSSGMLPDK 362
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+TL ++ AC+ G+++ + + E + +V + ++D+ + G +D+A ++
Sbjct: 363 ITLASLLYACSHAGLVEEGLRFFSSMWE--DYSVRTDVKHYTCVVDLLGRAGRLDEALKL 420
Query: 245 FVGM 248
M
Sbjct: 421 IKSM 424
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 43/248 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ WT +I GY G+ +S+ L+ MR EG+ P + + AC +
Sbjct: 891 RFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAK- 949
Query: 66 LDVSLGQQIHAQTI----LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
LG A+TI F D+ +G MI M+ KCG + +R++FD M E++V+S
Sbjct: 950 ----LGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 1005
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W+ +I AY +G + R+A++ F M +G+
Sbjct: 1006 WSAMIAAYGYHG-------------------------------QGRKALDLFPMMLRSGI 1034
Query: 182 ETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ +TLV ++ AC+ G+++ + + E + +V + ++D+ + G +D+
Sbjct: 1035 LPNKITLVSLLYACSHAGLVEEGLRFFSXMWE--DYSVRXDVKHYTCVVDLLGRAGRLDE 1092
Query: 241 AYRIFVGM 248
A ++ M
Sbjct: 1093 ALKLIXSM 1100
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
+ S G + N++V + L+ YS ++DDAY +F GM R+ S+S M+ GFA G
Sbjct: 760 QASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMN 819
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSH---------VGLKCYGVSPSTDHYAC--MVD 320
F ++++ +P+ T V+ AC + Y DH+ C +VD
Sbjct: 820 CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 879
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKI 378
+ G+ +E+A + +KM E + W ++G N + + + + E + PDK+
Sbjct: 880 MYGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 938
Query: 379 GNYIILSNIYASAGM 393
+++ ++A A +
Sbjct: 939 A---MVTVVFACAKL 950
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
A+ S G + N+VV + LI YS ++DDAY +F GM R+ S+S M+ GFA G
Sbjct: 83 AQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYI 142
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSH---------VGLKCYGVSPSTDHYAC--MV 319
F ++++ +P+ T V+ AC + Y DH+ C +V
Sbjct: 143 NCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 202
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
D+ + +E+A + +KM E + W ++G
Sbjct: 203 DMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIG 234
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 312/556 (56%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
F ++ ++ W +LI GY G ++I ++ +R I P + T+ + AC + D
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G IH + LG F SD +V N +I MY KCG
Sbjct: 547 LDQGTCIHGLIVKLG-FESDCHVKNALIDMYAKCG------------------------- 580
Query: 128 AYANNGDMESAGGLFNELPL-KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ SA LFN+ KD+V W ++ Y+QN +EAI F +M+ + V
Sbjct: 581 ------SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSV 634
Query: 187 TLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V V+ A A L + A C I G ++N +VG++LIDMY+KCG + + ++
Sbjct: 635 TFVSVLPAAAYLAAFREGMAFHACIIQ----MGFLSNTLVGNSLIDMYAKCGQLXYSEKL 690
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M ++ S+++M+ G+A+HG AI LF M +++ + + V+F+ VL+AC H GL
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLV 750
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P +HYACMVDLLGRAG +E L ++ MPVEP+ GVWGALLG
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C++H N ++ ++A +HL +LEP ++++LS+IYA +G W D + R + GLKK
Sbjct: 811 SCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT 870
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E + +H FR GD +HP + LL++++ GY P+ VL +V +E+
Sbjct: 871 PGCSWVEL-KNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L +HSE+LA+ F LL T PG+T++I+KNLR+C DCH S++ R I+VRD
Sbjct: 930 KEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDAT 989
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 990 RFHHFEDGICSCNDYW 1005
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + LW ++IR Y +++ +Y M +G+ P +T + + KACT
Sbjct: 83 RSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGA 142
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L++ G H + I G D+++G ++ MY K
Sbjct: 143 LNLQEGVWFHGE-IDRRGLERDVFIGAGLVDMYSKM------------------------ 177
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
GD++ A +F+++P +D VAW AM+ G Q+ P EA+++F MQ GVE
Sbjct: 178 -------GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSS 230
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+L+ + +L I+ +C G F + V + LID+YSKCG +D A R+F
Sbjct: 231 VSLLNLFPGICKLSNIE----LCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
M ++ S+ +M+ G+A +G ++LF M + N V+ + A +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA 340
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 174/397 (43%), Gaps = 46/397 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q+ ++ W ++ GY G + + L+ M+ + + + F A E
Sbjct: 283 RRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAET 342
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+ G++IH GC+ + + D++ T L
Sbjct: 343 IDLEKGKEIH-----------------------------GCA---LQQRIDSDILVATPL 370
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+V YA G+ E A LF L +D VAW+A++ VQ P EA+ F+ MQ ++ +
Sbjct: 371 MVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNR 430
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTL+ ++ ACA L ++K + + +++ G+AL+ MY+KCG A F
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMD--SDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M R++ +++S+I G+A G + AI +F + + P+ T +GV+ AC+
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G ++D+ + G L A + K + W ++ A
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
+ + + A I++ H LE + +S + A+A
Sbjct: 609 MQNGHAKEA-ISSFHQMRLENFHPNSVTFVSVLPAAA 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 168/365 (46%), Gaps = 53/365 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W A+I G +++ + SM+ G+ P S +L LF ++
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ L + IH + F+S V N +I +Y KCG + +R+VFD+M ++D VSW +
Sbjct: 244 SNIELCRSIHGY-VFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA+NG +V E +E F++M+ V +
Sbjct: 301 MAGYAHNG-------------------------CFV------EVLELFDKMKLGNVRINK 329
Query: 186 VTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
V+ V A A+ ++ + C + + ++++V + L+ MY+KCG + A +
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRID----SDILVATPLMVMYAKCGETEKAKQ 385
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G++ R++ ++S++I G A+ LF +M + KPN VT + +L AC+ + L
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 304 -------KCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL- 351
C+ V D +V + + G AL +M + W +L+
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
Query: 352 GACQI 356
G QI
Sbjct: 505 GYAQI 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S T LI Y+ + A +F+ P ++ W +M+ Y ++ + EA+E + M G
Sbjct: 65 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 124
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+E D T V+ AC G + V E G +V +G+ L+DMYSK G +
Sbjct: 125 LEPDKYTFTFVLKACT--GALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA--- 297
A +F M +R+V ++++MI G + A+ F M +P+ V+ + +
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICK 242
Query: 298 ------CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
C + + S+ ++DL + G ++ A ++ ++M V+ + WG ++
Sbjct: 243 LSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMM 301
Query: 352 G 352
Sbjct: 302 A 302
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 311/554 (56%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ WT LI GY D++ + M R G P FTLS++ KA
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Q+H + G F S+++VG+ ++ +Y + G
Sbjct: 175 RRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL---------------------- 211
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F+ L ++ V+W A++ G+ + + +A+E F+ M G +
Sbjct: 212 ---------MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + AC+ G ++ WV SG + G+ L+DMY+K GSI DA +IF
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIF 320
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R+V S++S++ +A HG A+ F +M + +PN ++F+ VLTACSH GL
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K G+ P HY +VDLLGRAG L AL+ +E+MP+EP +W ALL AC
Sbjct: 381 EGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA H+FEL+PD G ++IL NIYAS G W+D +RVR+ +K +G+KK P
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + IH F A D HP EI + ++L +++ GY P+ V+ V +E++
Sbjct: 501 CSWVEIE-NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQERE 559
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF LL T PG+T+ I KN+R+C DCH + AS+V+GREI+VRD RF
Sbjct: 560 VNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRF 619
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC +YW
Sbjct: 620 HHFKDGNCSCKDYW 633
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 46/313 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ L K CT + G+ +HA IL F D+ +GNT++ MY KCG
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMYAKCG------------- 109
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+E A +F ++P +D V WT +++GY Q+ +P +A+ +F +
Sbjct: 110 ------------------SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M G + TL VI A A + + GF +NV VGSAL+D+Y++
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD--SNVHVGSALLDLYTRY 209
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +DDA +F ++ RN S++++I G A A++LF M++ +P+ ++ +
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 296 TACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACS G + Y + A ++D+ ++G + +A K+ +++ + +
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDV 328
Query: 345 GVWGALLGACQIH 357
W +LL A H
Sbjct: 329 VSWNSLLTAYAQH 341
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 319/554 (57%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE + + L+ ++ RGY +ISL+ + P +T +L KAC
Sbjct: 83 LFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKA 142
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+H I LG + YV T+I MY C
Sbjct: 143 FQQGKQLHCLAIKLG-LNENPYVCPTLINMYAGCN------------------------- 176
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D++ A +F+E+ V++ A++TGY ++++P EA+ F ++Q ++ + VT
Sbjct: 177 ------DVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVT 230
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V+S+CA LG + W+ E + +G V V +ALIDMY+KCGS+D A +F
Sbjct: 231 VLSVLSSCALLGALDLGKWIHEYVKKNGLD--KYVKVNTALIDMYAKCGSLDGAISVFES 288
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+ ++S+MI+ +AMHG+ + +F +M + + +P+ +TF+G+L ACSH GL
Sbjct: 289 MSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEG 348
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P HY CMVDLLGRAG L EA K ++++P++P +W LL +C
Sbjct: 349 FRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCS 408
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+A+ N + EL+ G+Y+ILSN+ A AG W+DV +R+L+ G K PG
Sbjct: 409 SHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGC 468
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVSDEEKK 474
S +E D V+HEF +GD H ST + +AL +L+ L++ GY P+ V++ D+ DEEK+
Sbjct: 469 SSIEVD-NVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKE 527
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA++FGLL T PG T+R++KNLR+C DCH S +I REI++RD RF
Sbjct: 528 ITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRF 587
Query: 535 HHFQDGKCSCGNYW 548
HHF+DGKCSCG+YW
Sbjct: 588 HHFKDGKCSCGDYW 601
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 19/257 (7%)
Query: 116 ERDVVSWTELIVAYANN---GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ D+ T+LI + N M+ A LF +P D V + +M GY ++ P +AI
Sbjct: 55 QNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISL 114
Query: 173 F-ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F + + Y + DY T ++ AC + + +A G N V LI+M
Sbjct: 115 FIKALNYNLLPDDY-TFPSLLKACVVAKAFQQGKQLHCLAIKLGLN--ENPYVCPTLINM 171
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y+ C +D A R+F + + V SY+++I G+A R + A+ LF + + KPN VT
Sbjct: 172 YAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTV 231
Query: 292 IGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+ VL++C+ +G +K G+ ++D+ + G L+ A+ + E M V
Sbjct: 232 LSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSV 291
Query: 341 EPNGGVWGALLGACQIH 357
+ W A++ A +H
Sbjct: 292 R-DTQAWSAMIVAYAMH 307
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 296/488 (60%), Gaps = 16/488 (3%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
+HA + L G D +V + + MY G +G +R F E+ DVV T ++ A A
Sbjct: 216 SVHA-SALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATG 274
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G+ ++A LF+ +P +D VAW AM+ GYV + REA+ F+ M++AG VTLV +
Sbjct: 275 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 334
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ACAQLG ++ WV A G +V +G+ALIDMYSKCG++ A +F M +RN
Sbjct: 335 TACAQLGALERGKWVHSCAHSRGMRL--SVTLGTALIDMYSKCGAVAAAMEVFDSMGERN 392
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCY- 306
V++++S + G AM+G + LF M T +PNGVTF+ VL CS GL C+
Sbjct: 393 VYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFD 452
Query: 307 ------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
G+ P +HY CMVDL GRAG L++A+ + MP+EP+ GVWGALL A +IH+N
Sbjct: 453 SMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNV 512
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ + A + L +E +++LSNIYA + W VS VR ++K G+KK PG S +E
Sbjct: 513 ELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEV 572
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
G +HEF G THP EI+ L ++ RL+ GY N + VL+D+ +E+K+ + H
Sbjct: 573 G-GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLH 631
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SEKLA+AFGL+ +RI+KNLR+CEDCH + S+V REIV+RD RFHHF+DG
Sbjct: 632 SEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDG 691
Query: 541 KCSCGNYW 548
CSC +YW
Sbjct: 692 ACSCKDYW 699
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A+I GY+ G ++++ L+ MR G TL + AC ++
Sbjct: 281 RELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQL 340
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H+ G S + +G +I MY KCG + + +VFD M ER+V +W
Sbjct: 341 GALERGKWVHSCAHSRGMRLS-VTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTW--- 396
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
T+ V+G N R+ + F+RM+ GVE +
Sbjct: 397 ----------------------------TSAVSGLAMNGMGRDCLALFKRMESTGVEPNG 428
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V V+ C+ G++ C + S G + ++D+Y + G +DDA
Sbjct: 429 VTFVVVLRGCSMAGLVDEGR-ACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFI 487
Query: 246 VGM 248
GM
Sbjct: 488 NGM 490
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 322/558 (57%), Gaps = 28/558 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ + + L+ + G + L+ SM + + +S L K+
Sbjct: 69 RHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKS---- 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
G A+ + L + N M+ + + + + F PE+ D V WT
Sbjct: 125 -----GAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTA 179
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVET 183
++ Y + G++ A F +P+++ V+W A+V GYV+N+ +A+ F M + A V+
Sbjct: 180 MVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAY 242
+ TL V+ C+ L + + +I + P++ N+ VG++L+ MY KCG + A
Sbjct: 240 NASTLSSVLLGCSNLSALGFGK---QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R+V ++++MI G+A HG AI LF M +PN +TF+ VLTAC H G
Sbjct: 297 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 303 L-----KC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +C YG+ P DHY+CMVDLL RAG LE A+ ++ MP EP+ +G L
Sbjct: 357 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTL 416
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++++N E A++AA L E +P G Y+ L+NIYA A WDDVSRVRR +K +
Sbjct: 417 LAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVV 476
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E +GV+HEFR+ D HP I + LG L +R++A GY P+L VL+DV +
Sbjct: 477 KTPGYSWIE-IKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDE 535
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
K ++LM HSEKLA++FGL++T+PG T+RI KNLR+C DCH S++ REI++RD
Sbjct: 536 TLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRD 595
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 596 TTRFHHFRGGHCSCGDYW 613
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 92 NTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
N ++ Y + G L +R +FD +P D VS+ L+ + +GD + A LF +P++D
Sbjct: 52 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 111
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS--ACAQLGVIKYANWVC 208
V+W MV+G ++ EA F M + V+ ++S AC++ + W
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAMPV----RNSVSWNAMVSGFACSR-DMSAAEEWFR 166
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E + V+ +A++ Y G++ A F M RN+ S+++++ G+ +
Sbjct: 167 NAPEK------GDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSH 220
Query: 269 AHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGR 324
A A++LF MV+ +PN T VL CS++ +G H CM L R
Sbjct: 221 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG---KQIHQWCMKLPLSR 274
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 34/186 (18%)
Query: 100 KCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
+C FL +R + T + A GD+ A F P K + ++ G
Sbjct: 5 RCPFLASARSHTCSLS-------TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAG 57
Query: 160 YVQN-AKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG- 217
Y + + +A F+R+ Y TL+ C A G G
Sbjct: 58 YARALGRLADARHLFDRIPTPDA-VSYNTLLS-----------------CHFASGDADGA 99
Query: 218 -------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
P+ +VV + ++ SK G++++A +F+ M RN S+++M+ GFA
Sbjct: 100 RRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMS 159
Query: 271 AAIQLF 276
AA + F
Sbjct: 160 AAEEWF 165
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 322/558 (57%), Gaps = 28/558 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ + + L+ + G + L+ SM + + +S L K+
Sbjct: 118 RHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKS---- 173
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
G A+ + L + N M+ + + + + F PE+ D V WT
Sbjct: 174 -----GAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTA 228
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVET 183
++ Y + G++ A F +P+++ V+W A+V GYV+N+ +A+ F M + A V+
Sbjct: 229 MVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 288
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAY 242
+ TL V+ C+ L + + +I + P++ N+ VG++L+ MY KCG + A
Sbjct: 289 NASTLSSVLLGCSNLSALGFGK---QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 345
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R+V ++++MI G+A HG AI LF M +PN +TF+ VLTAC H G
Sbjct: 346 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
Query: 303 L-----KC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +C YG+ P DHY+CMVDLL RAG LE A+ ++ MP EP+ +G L
Sbjct: 406 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTL 465
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC++++N E A++AA L E +P G Y+ L+NIYA A WDDVSRVRR +K +
Sbjct: 466 LAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVV 525
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E +GV+HEFR+ D HP I + LG L +R++A GY P+L VL+DV +
Sbjct: 526 KTPGYSWIE-IKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDE 584
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
K ++LM HSEKLA++FGL++T+PG T+RI KNLR+C DCH S++ REI++RD
Sbjct: 585 TLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRD 644
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 645 TTRFHHFRGGHCSCGDYW 662
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 92 NTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
N ++ Y + G L +R +FD +P D VS+ L+ + +GD + A LF +P++D
Sbjct: 101 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 160
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS--ACAQLGVIKYANWVC 208
V+W MV+G ++ EA F M + V+ ++S AC++ + W
Sbjct: 161 VSWNTMVSGLSKSGAVEEAKAVFLAMPV----RNSVSWNAMVSGFACSR-DMSAAEEWFR 215
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
E + V+ +A++ Y G++ A F M RN+ S+++++ G+ +
Sbjct: 216 NAPEK------GDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSH 269
Query: 269 AHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGR 324
A A++LF MV+ +PN T VL CS++ +G H CM L R
Sbjct: 270 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG---KQIHQWCMKLPLSR 323
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGV 181
T + A GD+ A F P K + ++ GY + + +A F+R+
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 129
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG--------PINNVVVGSALIDMYS 233
Y TL+ C A G G P+ +VV + ++ S
Sbjct: 130 -VSYNTLLS-----------------CHFASGDADGARRLFASMPVRDVVSWNTMVSGLS 171
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
K G++++A +F+ M RN S+++M+ GFA AA + F
Sbjct: 172 KSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 214
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/623 (37%), Positives = 319/623 (51%), Gaps = 86/623 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N LW ++ Y L S L+C M G+ P FT L + CT +
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360
Query: 68 VSLGQQIHAQTILLGGFTSDLYVG-------------------------------NTMIG 96
++LG+QIH +I G F SD+YV +MI
Sbjct: 361 INLGEQIHLLSIKTG-FESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419
Query: 97 MYVKCGFLGCSRKVFDEM------PER--------------------------------- 117
YV+ F + + F +M P+
Sbjct: 420 GYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSA 479
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV W L+ YA G + A LF + KDK+ W MV+G+ Q+ EA+E F +M
Sbjct: 480 DVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMY 539
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
AGV+ + T V ISA A L IK + +G + V +ALI +Y KCGS
Sbjct: 540 QAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG--CTSETEVANALISLYGKCGS 597
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+DA F M +RN S++++I + HG A+ LF M + KPN VTFIGVL A
Sbjct: 598 IEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAA 657
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSHVGL +G+ P DHYAC+VD+LGRAG L+ A K VE+MPV N
Sbjct: 658 CSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAM 717
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
VW LL AC++H+N EI ++AA +L ELEP +Y++LSN YA G W VR+++K
Sbjct: 718 VWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMK 777
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G++K PG SW+E + V+H F GD HP + +I + L DL DRL GY +
Sbjct: 778 DRGVRKEPGRSWIE-VKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLF 836
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ E+K HSEKLA+AFGL++ P +R++KNLR+C DCH +M S+V+GRE
Sbjct: 837 HEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGRE 896
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IV+RD RFHHF +G CSCG++W
Sbjct: 897 IVLRDVYRFHHFNNGNCSCGDFW 919
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 51/401 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFEQ+ ++ W A++ GY G ++++ LY M G+ P + LS++ ACT+
Sbjct: 97 RRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKA 156
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+ +HAQ + G S+ VGN +I +Y++ G L + +VF EMP D V++ L
Sbjct: 157 ALFEQGRLVHAQ-VYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTL 215
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +A G+ ES A+E FE M+ +G D
Sbjct: 216 ISRHAQCGNGES-------------------------------ALEIFEEMRLSGWTPDC 244
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ +++ACA +G + + +G P + ++ +L+D+Y KCG I +A IF
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSP--DYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
+ NV ++ M++ + + LF MV +PN T+ +L C++ G
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362
Query: 303 ------LKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
L +D Y ++D+ + G L++A +++E + + + W +++
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGY 421
Query: 355 QIHR--NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
H + LF + PD IG + S I A AG+
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIG---LASAISACAGI 459
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 158/361 (43%), Gaps = 49/361 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S VF ++ Y + + LI + G+ + ++ ++ MR G P T+++L AC
Sbjct: 195 SLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAAC 254
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D++ G+Q+H+ +L G + D + +++ +YVKCG + + ++F +VV W
Sbjct: 255 ASIGDLNKGKQLHSY-LLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLW 313
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++VAY D+ + LF + M AGV
Sbjct: 314 NLMLVAYGQISDLAKSFDLFCQ-------------------------------MVAAGVR 342
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T ++ C G I + ++ +GF +++ V LIDMYSK G +D A
Sbjct: 343 PNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFE--SDMYVSGVLIDMYSKYGWLDKAR 400
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
RI ++ ++V S++SMI G+ H A++ F DM P+ + ++AC+
Sbjct: 401 RILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIK 460
Query: 300 --------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE----KMPVEPNGGVW 347
H + G S + +V+L R G +EA + E K + NG V
Sbjct: 461 AMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVS 520
Query: 348 G 348
G
Sbjct: 521 G 521
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 24 IRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILL 81
+ G++ + +SL+ + R+ G+G V F AL + V L IHA+ I
Sbjct: 13 LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFA-CALRECRGSVKHWPLVPVIHAKAITC 71
Query: 82 GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGL 141
G D GN +I +Y K G + +R+VF+++ RD VSW ++ YA NG E A GL
Sbjct: 72 G-LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGL 130
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI 201
+++ M +GV L V+SAC + +
Sbjct: 131 YHQ-------------------------------MHCSGVVPTPYVLSSVLSACTKAALF 159
Query: 202 KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
+ V A+ G + VVG+ALI +Y + GS+ A R+F M + +++++I
Sbjct: 160 EQGRLV--HAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLIS 217
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCY----GVSP 310
A G +A+++F +M + P+ VT +L AC+ +G L Y G+SP
Sbjct: 218 RHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSP 277
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++DL + G + EAL++ K N +W +L A
Sbjct: 278 DYIIEGSLLDLYVKCGVIVEALEIF-KSGDRTNVVLWNLMLVA 319
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/547 (37%), Positives = 320/547 (58%), Gaps = 17/547 (3%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N WT LI GY G +++ + SM +GI P T+ L AC ++ D+ G+ +
Sbjct: 200 RNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSL 259
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELIVAYANNG 133
H G S V +I MY KCG +G + +VFD + R SW +I Y G
Sbjct: 260 HKLVGEKGMLMSGKLV-VALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLG 318
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
++ A LF+++ +D V + +++TGY+ + REA+ F +M+ + D T+V +++
Sbjct: 319 HVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLT 378
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
ACA LG + + E ++ +G+AL+DMY KCG +++A +F M R+V
Sbjct: 379 ACASLGALPQGRALHACIEQRLVEV--DIYLGTALLDMYLKCGRVEEASLVFQAMSVRDV 436
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--------- 304
++S+MI G A +G AA++ F M +PN VT+I +LTACSH L
Sbjct: 437 HTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEE 496
Query: 305 ---CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+ + P +HY CM+DLLGR+G L+EA+ +V MP++PN +W ++L AC++H++
Sbjct: 497 MRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDAN 556
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+A+ AA HL +LEPD+ Y+ L NIY + W+D S++RRL++ G+KK GYS +
Sbjct: 557 LARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVA 616
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
G +H+F D THP EI + ++ RL++ GY P + DV +EEK+ L+ HS
Sbjct: 617 -GQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHS 675
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EK+A+AFGL++ +P + I+KNLR+CEDCH + S++ REI+VRD RFHHF+DG
Sbjct: 676 EKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGT 735
Query: 542 CSCGNYW 548
CSC ++W
Sbjct: 736 CSCNDFW 742
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 183/389 (47%), Gaps = 47/389 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
+F+++ TAL + + + LY MRR G+ +FT LFK C
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V L Q +HA ++ V N +I MYV+ G G +R+ FD++P +D V+WT +I
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A G ++ A L P ++ ++WT +++GY + + EA++ F M G+E D V
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEV 238
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T++G++SACAQL + + + ++ G +VV ALIDMY+KCG I A+ +F
Sbjct: 239 TVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVV--ALIDMYAKCGDIGRAWEVFD 296
Query: 247 G--------------------------------MKQRNVFSYSSMILGFAMHGRAHAAIQ 274
M+ R++ +++S+I G+ GR A+
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALL 356
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDLLG 323
LF M + + + + T + +LTAC+ +G G + D Y ++D+
Sbjct: 357 LFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYL 416
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ G +EEA + + M V + W A++
Sbjct: 417 KCGRVEEASLVFQAMSVR-DVHTWSAMIA 444
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q++ ++ + +LI GYI G L++++ L+ MRR + +FT+ +L AC +
Sbjct: 324 RYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASL 383
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +HA I D+Y+G ++ MY+KCG + + VF M RDV +W
Sbjct: 384 GALPQGRALHA-CIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTW--- 439
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+AM+ G N + A+EYF M+ G + +
Sbjct: 440 ----------------------------SAMIAGLAFNGMGKAALEYFFWMKVDGFQPNS 471
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG-SALIDMYSKCGSIDDAYRI 244
VT + +++AC+ ++ E E I ++ +ID+ + G +D+A +
Sbjct: 472 VTYIAILTACSHSCLLDEGRLYFE--EMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDL 529
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
M Q N ++S++ +H A+ A ++K E + V
Sbjct: 530 VRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAV 575
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 324/558 (58%), Gaps = 30/558 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS--FTLSALFKACT 63
R F+ + ++ W +I GY G + ++ L+ PV FT +A+
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGYI 292
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ V +++ + + N M+ YV+ + ++++FD MP R+V +W
Sbjct: 293 QNRMVEEARELFDKMP-----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA G + A LF+++P +D V+W AM+ GY Q+ EA+ F +M+ G
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ + +S CA + ++ + + +G G VG+AL+ MY KCGSI++A
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKG---GYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +++ S+++MI G++ HG A++ F M + KP+ T + VL+ACSH G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YGV P++ HYACMVDLLGRAG LE+A +++ MP EP+ +WG L
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA ++H N E+A+ AA+ +F +EP+ G Y++LSN+YAS+G W DV ++R ++ G+K
Sbjct: 585 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PGYSW+E + H F GD HP EI L +L R++ GY VL+DV +
Sbjct: 645 KVPGYSWIE-IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEE 703
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+R++ HSE+LA+A+G++ S G +R++KNLR+CEDCH + +++ GR I++RD
Sbjct: 704 EEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRD 763
Query: 531 NMRFHHFQDGKCSCGNYW 548
N RFHHF+DG CSCG+YW
Sbjct: 764 NNRFHHFKDGSCSCGDYW 781
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 19/296 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + ++ W ++ GY G + D+ S++ M + + LSA
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY------- 198
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V + A + L N ++G +VK + +R+ FD M RDVVSW +
Sbjct: 199 --VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTI 256
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G ++ A LF+E P++D WTAMV+GY+QN EA E F++M E +
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNE 312
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +++ Q ++ A + ++ P NV + +I Y++CG I +A +F
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVM------PCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
M +R+ S+++MI G++ G + A++LF M + + N +F L+ C+ V
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 31/340 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W I Y+ G +++ ++ M R + +S + L L ++ +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER-- 124
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
DL N MI YV+ LG +R++F+ MPERDV SW ++ YA NG ++ A
Sbjct: 125 -------DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE-RMQYAGVETDYVTLVGVISACAQL 198
+F+ +P K+ V+W A+++ YVQN+K EA F+ R +A V + C
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN----------CLLG 227
Query: 199 GVIKYANWVCEIAEGSGFGP---INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
G +K +I E F + +VV + +I Y++ G ID+A ++F ++VF+
Sbjct: 228 GFVKKK----KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 256 YSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGLKCYGVSP--ST 312
+++M+ G+ + A +LF M + E N + V + + + V P +
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 313 DHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ M+ + G + EA + +KMP + + W A++
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA 382
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 27/311 (8%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
Q+ + +L G SD+ N I Y++ G + +VF MP VS+ +I Y
Sbjct: 49 QKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLR 107
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
NG+ E A LF+E+P +D V+W M+ GYV+N +A E FE M E D + +
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTM 163
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+S AQ G + A V + P N V +AL+ Y + +++A +F +
Sbjct: 164 LSGYAQNGCVDDARSVFDRM------PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----LKCY 306
+ S++ ++ GF + A Q F M + V++ ++T + G + +
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLF 273
Query: 307 GVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
SP D + MV + +EEA ++ +KMP E N W A+L E+A+
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAK 332
Query: 365 IAANHLFELEP 375
LF++ P
Sbjct: 333 ----ELFDVMP 339
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 326/562 (58%), Gaps = 61/562 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ K+ WTA+I G+ G +++I L+ MR E + +T ++ AC V
Sbjct: 228 RQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGV 287
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+Q+HA I+ + +++VG+ ++ MY KC
Sbjct: 288 MALQEGKQVHA-YIIRTDYQDNIFVGSALVDMYCKCK----------------------- 323
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++SA +F ++ K+ V+WTAM+ GY QN EA++ F MQ G+E D
Sbjct: 324 --------SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDD 375
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSI 238
TL VIS+CA L ++ EG+ F G I+ + V +AL+ +Y KCGSI
Sbjct: 376 FTLGSVISSCANLASLE---------EGAQFHCRALVSGLISFITVSNALVTLYGKCGSI 426
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+D++R+F M + S+++++ G+A G+A+ ++LF M+ KP+ VTFIGVL+AC
Sbjct: 427 EDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSAC 486
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S GL K + + P DHY CM+DL RAG LEEA K + KMP P+
Sbjct: 487 SRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIG 546
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W +LL +C+ HRN EI + AA L +LEP +YI+LS+IYA+ G W++V+ +R+ ++
Sbjct: 547 WASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRD 606
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
GL+K PG SW++ + +H F A D ++P S +I L L ++ +GY P++ SVL+
Sbjct: 607 KGLRKEPGCSWIKY-KNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLH 665
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV D EK ++L HSEKLA+AFGL+ PG +R++KNLR+C DCH S++ REI
Sbjct: 666 DVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREI 725
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD RFH F+DG+CSCG++W
Sbjct: 726 LVRDAARFHLFKDGRCSCGDFW 747
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 198/392 (50%), Gaps = 18/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
VF + ++ W +LI Y +G L S+ Y M G ++ LS + ++
Sbjct: 97 VFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQG 156
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V LG Q+H + G F S ++VG+ ++ MY K G + C+R+ FDEMPE++VV + LI
Sbjct: 157 CVHLGLQVHGHVVKFG-FQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLI 215
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+E + LF ++ KD ++WTAM+ G+ QN REAI+ F M+ +E D
Sbjct: 216 AGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQY 275
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V++AC + ++ V + + +N+ VGSAL+DMY KC SI A +F
Sbjct: 276 TFGSVLTACGGVMALQEGKQVHAYIIRTDYQ--DNIFVGSALVDMYCKCKSIKSAETVFR 333
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M +NV S+++M++G+ +G + A+++F DM +P+ T V+++C+++
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393
Query: 303 ---LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GAC 354
C + + +V L G+ G +E++ ++ +M W AL+ G
Sbjct: 394 GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVS-WTALVSGYA 452
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E ++ + L +PDK+ +LS
Sbjct: 453 QFGKANETLRLFESMLAHGFKPDKVTFIGVLS 484
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 63/342 (18%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L K C + ++IH I+ ++++ N ++ Y K + +R+VFD+MP+R
Sbjct: 21 LLKHCRDT------KKIHCH-IIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR 73
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
++ SW L+ +Y+ + +F+ +P +D V+W ++++ Y ++++ + M
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 178 YAG------VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
Y G + + ++ C LG+ + + V FG + V VGS L+DM
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVV-------KFGFQSYVFVGSPLVDM 186
Query: 232 YSK-------------------------------CGSIDDAYRIFVGMKQRNVFSYSSMI 260
YSK C I+D+ ++F M++++ S+++MI
Sbjct: 187 YSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMI 246
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY 315
GF +G AI LF +M + + TF VLTAC V G + + TD+
Sbjct: 247 AGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQ 306
Query: 316 ------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +VD+ + ++ A + KM + N W A+L
Sbjct: 307 DNIFVGSALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAML 347
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/557 (35%), Positives = 318/557 (57%), Gaps = 24/557 (4%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +FE++ N + ++ + + D+ + SM + + + +SAL
Sbjct: 91 YARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISAL----- 145
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+G A+ + + + M+ YV CG L + + F P R V++WT
Sbjct: 146 ----AQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWT 201
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y G +E A LF E+ ++ V W AM+ GYV+N + + + F M GV+
Sbjct: 202 AMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKP 261
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ ++L V+ C+ L ++ V ++ ++ G++L+ MYSKCG + DA+
Sbjct: 262 NALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLS--SDTTAGTSLVSMYSKCGDLKDAWE 319
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F+ + +++V +++MI G+A HG A++LF +M K KP+ +TF+ VL AC+H GL
Sbjct: 320 LFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGL 379
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +G+ +HYACMVDLLGRAG L EA+ +++ MP +P+ ++G LL
Sbjct: 380 VDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLL 439
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N +A+ AA +L EL+P Y+ L+N+YA+ WD V+ +RR +K + K
Sbjct: 440 GACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVK 499
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E + V+H FR+ D HP I + L DL +++ GY P+L VL+DV +E
Sbjct: 500 IPGYSWIEIN-SVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEE 558
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+++L+ HSEKLA+AFGLL G +R+ KNLR+C DCH S + GREI+VRD
Sbjct: 559 LKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDT 618
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 619 TRFHHFKDGFCSCRDYW 635
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 153/328 (46%), Gaps = 44/328 (13%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V+L + + + T +++ N +I YV+CG + + +VF++M + V+W ++
Sbjct: 21 VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80
Query: 128 AYANN-GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A+A G E A LF ++P + V++ M+ + + +A +F+ M D
Sbjct: 81 AFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPL----KDVA 136
Query: 187 TLVGVISACAQLGVIKYA----------NWVCEIAEGSGF---------------GPINN 221
+ +ISA AQ+G++ A N V A SG+ P+ +
Sbjct: 137 SWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRS 196
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V+ +A+I Y K G ++ A R+F M R + ++++MI G+ +GRA ++LF M++
Sbjct: 197 VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLE 256
Query: 282 TETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLE 329
T KPN ++ VL CS++ KC +S T +V + + G L+
Sbjct: 257 TGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC-PLSSDTTAGTSLVSMYSKCGDLK 315
Query: 330 EALKMVEKMPVEPNGGVWGALLGACQIH 357
+A ++ ++P + W A++ H
Sbjct: 316 DAWELFIQIP-RKDVVCWNAMISGYAQH 342
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 327/563 (58%), Gaps = 54/563 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +FE ++ W +I + ++++ + M EG+ T++++ AC+ +
Sbjct: 168 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 227
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G++IHA + + +VG+ ++ MY C + R+VFD + R +
Sbjct: 228 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRI------ 281
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA-IEYFERMQYAGVETD 184
EL W AM++GY +N +A I + E ++ AG+ +
Sbjct: 282 ------------------EL-------WNAMISGYARNGLDEKALILFIEMIKVAGLLPN 316
Query: 185 YVTLVGVISACAQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T+ V+ AC L I + A + +++ VGSAL+DMY+KCG ++ + R
Sbjct: 317 TTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLA--SDITVGSALVDMYAKCGCLNLSRR 374
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-----ETKPNGVTFIGVLTAC 298
+F M +NV +++ +I+ MHG+ A++LF +MV E KPN VTFI V AC
Sbjct: 375 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 434
Query: 299 SHVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-G 345
SH GL +GV P++DHYAC+VDLLGRAG LEEA ++V MP E + G
Sbjct: 435 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG 494
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
W +LLGAC+IH+N E+ ++AA +L LEP+ +Y++LSNIY+SAG+W+ VR+ ++
Sbjct: 495 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 554
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+KK PG SW+E R +H+F AGD++HP S ++ L L ++++ +GY P+ VL
Sbjct: 555 QMGVKKEPGCSWIEF-RDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVL 613
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++V ++EK+ +L HSEKLA+AFG+L T PG T+R+ KNLR+C DCH S+++ RE
Sbjct: 614 HNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMERE 673
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD RFHHF++G CSCG+YW
Sbjct: 674 IIVRDVRRFHHFKEGTCSCGDYW 696
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R +++IS Y M G P +F A+ KA + + D+ G+QIHA +
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G +S + V NT++ MY KCG +G K F L+ YA G ++ +
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIG--DKTFTN---------NALMAMYAKLGRVDDSK 168
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF +D V+W M++ + Q+ + EA+ +F M GVE D VT+ V+ AC+ L
Sbjct: 169 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 228
Query: 200 VIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + + + I N VGSAL+DMY C ++ R+F + R + +++
Sbjct: 229 RLDVGKEIHAYVLRNNDL--IENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNA 286
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA- 316
MI G+A +G A+ LF +M+K PN T V+ AC H L YA
Sbjct: 287 MISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH-SLAAIAKGKEIHAYAI 345
Query: 317 ------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+VD+ + GCL + ++ +MP N W L+ AC +H E A
Sbjct: 346 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGEEA 403
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
P + +W + ++ REAI + M +G D V+ A + L +K
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI--------------------DDAYRIF 245
+ A G+G ++V V + L++MY KCG I DD+ +F
Sbjct: 113 QIHAAAVKFGYGS-SSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R++ S+++MI F+ R A+ F MV + +GVT VL ACSH+
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 227
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 320/549 (58%), Gaps = 47/549 (8%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
+++ + W +LI G + +G +D++S + MR + +TL ++ + + +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+H I+ GF + V N +I MY K G L C+ V
Sbjct: 61 ISVHC-LIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMV--------------------- 98
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
F+++ KD V+WT++VTGY N EAI+ F +M+ +GV D + + V
Sbjct: 99 ----------FSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASV 148
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+SACA+L V+ + + SG +++ V ++L+ MY+KCGSI DA R F M R
Sbjct: 149 LSACAELTVMDFGQQIHATLVKSGLE--SSLSVDNSLVTMYAKCGSIVDANRAFDNMPTR 206
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
+V S++++I+G+A +GR ++Q + M+ T TKP+ +TFIG+L ACSH GL
Sbjct: 207 DVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYF 266
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
K YG+ P +HYACM+DLLGR+G L EA ++ +M V P+ VW ALL AC++H+
Sbjct: 267 EAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKE 326
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
E+ ++AA +LFELEP Y++LSN+Y++AG W+D +R+RRL++ G+ K PGYSW+E
Sbjct: 327 LELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIE 386
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
+ V F + D HP EI + +++ ++ GY P++ L+D DE K+ L
Sbjct: 387 TNSKV-STFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAY 445
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+AFGLLT GA +RI KNLR+C DCH M S+V R I++RD+ FHHF +
Sbjct: 446 HSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTE 505
Query: 540 GKCSCGNYW 548
G+CSCG+YW
Sbjct: 506 GRCSCGDYW 514
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 67/292 (22%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF ++ K+ WT+L+ GY G +++I L+C MR G+ P ++++ AC E+
Sbjct: 97 MVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELT 156
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ GQQIHA T++ G S L V N+++ MY KCG + + + FD MP RDV+SWT LI
Sbjct: 157 VMDFGQQIHA-TLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALI 215
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V GY QN + + +++++++M G + DY+
Sbjct: 216 V-------------------------------GYAQNGRGKHSLQFYDQMIATGTKPDYI 244
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +G++ AC+ G++ GSG ++D Y I
Sbjct: 245 TFIGLLFACSHNGLL-----------GSGRAYFE----------------AMDKVYGIKP 277
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
G + Y+ MI G+ A L MV P+ V + +L AC
Sbjct: 278 GPEH-----YACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAAC 321
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/555 (37%), Positives = 319/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL FE + Y + L + +I Y + + L+ + R + P ++LS++ +ACT +
Sbjct: 299 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 358
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+QIH I +G SDL+VGN ++ Y KC
Sbjct: 359 VQLDFGKQIHNHAIKIG-HESDLFVGNALMDFYAKCN----------------------- 394
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DM+S+ +F+ L ++V+W +V G+ Q+ EA+ F MQ A +
Sbjct: 395 --------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 446
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V+ ACA I++A + E S F N+ V+G++LID Y+KCG I DA ++F
Sbjct: 447 VTYSSVLRACASTASIRHAGQIHCSIEKSTFN--NDTVIGNSLIDTYAKCGYIRDALKVF 504
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ +R++ S++++I G+A+HG+A A++LF M K+ + N +TF+ +L+ C GL
Sbjct: 505 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVN 564
Query: 306 YGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+S PS +HY C+V LLGRAG L +AL+ + +P P+ VW ALL +
Sbjct: 565 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 624
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C IH+N + + +A + E+EP Y++LSN+YA+AG D V+ +R+ ++ G++K P
Sbjct: 625 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 684
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH F G + HP+ I L L + +GY P++ VL+DV E+K
Sbjct: 685 GLSWVE-IKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQK 743
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
R+L HSE+LALA+GL+ T PG +RI+KNLR C DCH S+++ REI+VRD R
Sbjct: 744 TRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINR 803
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DGKCSCG+YW
Sbjct: 804 FHHFEDGKCSCGDYW 818
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 177/414 (42%), Gaps = 66/414 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N + L++ + +G + + +L+ +R EG F L+ + K +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +H+ LG + +VG+ +I Y C + + VF+ + +D V WT +
Sbjct: 176 DAAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 126 IVAYANN---------------------------------------------------GD 134
+ Y+ N GD
Sbjct: 235 VSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 294
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
++ A F +P D + + M++ Y Q+ + +A E F R+ + V + +L V+ A
Sbjct: 295 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 354
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C + + + + A G +++ VG+AL+D Y+KC +D + +IF ++ N
Sbjct: 355 CTNMVQLDFGKQIHNHA--IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 412
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------HVGLKCYGV 308
S++++++GF+ G A+ +F +M + VT+ VL AC+ H G +
Sbjct: 413 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 472
Query: 309 SPSTDHY-----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
ST + ++D + G + +ALK+ + + +E + W A++ +H
Sbjct: 473 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 525
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCS 107
G SF + + C D G+ +H + GG DL+ N ++ MY K G L +
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
R++FD MPER++VS+ L+ A+A GD E+A LF L + ++T ++ A
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA--- 172
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
+ D L G + +CA W G +N VGS
Sbjct: 173 -------------IAMDAAGLAGGVHSCA---------W--------KLGHDHNAFVGSG 202
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
LID YS C + DA +F G+ +++ +++M+
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/628 (35%), Positives = 340/628 (54%), Gaps = 90/628 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ RLVF Q+ + ++IRG + ++++ Y M +G+ P +T +LFK+C
Sbjct: 40 YARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR 99
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGN------------------------------- 92
+ S G+QIH + LG F SD Y N
Sbjct: 100 ---NSSEGKQIHCHSTKLG-FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWA 155
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPE------------------------------------ 116
TMIG++ + + ++FD M +
Sbjct: 156 TMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDE 215
Query: 117 ----RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
R VV T L+ Y G ++ A LF++ K+ +W M+ G+V+++ EA+
Sbjct: 216 HGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLL 275
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F MQ G++ D VT+ ++ AC LG ++ W+ + +V +G+AL+DMY
Sbjct: 276 FREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDV--DVALGTALVDMY 333
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCGSI+ A ++F M +++V +++++ILG AM G+A A+Q F +M KP+ +TF+
Sbjct: 334 AKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFV 393
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL ACSH G YG+ P+ +HY +VD+LGRAG + EA ++++ MP+
Sbjct: 394 GVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPM 453
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
P+ V G LLGAC+IH N E A+ AA L E++P G Y++LSNIY S+ W++ R
Sbjct: 454 APDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRT 513
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R L+ G++K PG S +E GV+HEF GD +H S+EI + L D++ +L+ GY P+
Sbjct: 514 RELMAERGMRKPPGCSQIEV-HGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPD 572
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
VL+D+++EEK+ L HSEKLA+AFGLL+TS G +R++KNLRIC DCH S+
Sbjct: 573 KSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISK 632
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ REI+VRD RFHHF+DG CSC +W
Sbjct: 633 LYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 22/254 (8%)
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FD +V++ L +G ++ A +F+++P +++ G +EA+
Sbjct: 18 FDPFTASKIVAFCSL----QESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEAL 73
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
+++ M G+ D T + +C K + + G ++ + L++
Sbjct: 74 LFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIH-----CHSTKLGFASDTYAQNTLMN 128
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGV 289
MYS CG + A ++F M+ + V S+++MI A + + A++LF M+K+E KPN V
Sbjct: 129 MYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEV 188
Query: 290 TFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
T + VLTAC+ H + +G ++D+ + GC++ A + +K
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248
Query: 339 PVEPNGGVWGALLG 352
E N W ++
Sbjct: 249 Q-EKNLFSWNIMIN 261
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 317/558 (56%), Gaps = 18/558 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + W A+I GY+ G +++++L MR GI T + + AC V
Sbjct: 243 REVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANV 302
Query: 66 LDVSLGQQIHAQTI---LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+G+Q+HA + L + L V N +I +Y K + +RK+F MP R++++W
Sbjct: 303 GSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITW 362
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ Y N G ME A F E+P+K+ + T M++G QN E ++ F++M+ G E
Sbjct: 363 NAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
G ++AC+ LG ++ + A+ G +++ VG+A+I MY+KCG ++ A
Sbjct: 423 PCDFAFAGALTACSVLGALENGRQL--HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAE 480
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+FV M ++ S++SMI HG AI+LF M+K P+ +TF+ VLTACSH G
Sbjct: 481 SVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + YG++P DHYA MVDL RAG A +++ MP +P VW AL
Sbjct: 541 LVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEAL 600
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+IH N ++ AA LF+L P G Y++LSNIYA G W+DV++VR+L++ ++
Sbjct: 601 LAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVR 660
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K P SW+E + V H F D HP + + L L ++ GY P+ + VL+D+
Sbjct: 661 KEPACSWIEVENKV-HVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEY 719
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+ L THSEKLA+ FG++ P ATVR+ KN+RIC DCH S+V REI+VRD
Sbjct: 720 EQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 779
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 780 RKRFHHFKNGDCSCRDYW 797
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 58/398 (14%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ- 73
++ + A+I GY G ++ L+ +MRR+ P FT +++ A VL V QQ
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL--VLFVGNEQQC 167
Query: 74 --IHAQTILLGGFTSDLYVGNTMIGMYVK--------CGFLGCSRKVFDEMPERDVVSWT 123
+H + G V N ++ +YVK C + +RK+FDEMP+RD ++WT
Sbjct: 168 GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWT 227
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y N D+ A +F + AW AM++GYV +EA+ +M++ G++
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQF 287
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN--VVVGSALIDMYSKCGSIDDA 241
D +T +ISACA +G + + + P ++ + V +ALI +Y K +D+A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAA----------------------------- 272
+IF M RN+ ++++++ G+ GR A
Sbjct: 348 RKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGD 407
Query: 273 --IQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMV 319
++LF M +P F G LTACS H L G S M+
Sbjct: 408 EGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMI 467
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ + G +E A + MP + W +++ A H
Sbjct: 468 SMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 178/410 (43%), Gaps = 85/410 (20%)
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
SL + +HA I GF + N ++ MY K + +R++F+E+P D ++ T LI A
Sbjct: 30 SLARAVHAHMIA-SGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITA 88
Query: 129 YANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y G++E +FN PL +D V + AM+TGY N A+E F M+ D
Sbjct: 89 YCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 187 TLVGVISA----------CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK-- 234
T V+SA C Q+ C + + +G G +++ V+ +AL+ +Y K
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMH--------CAVVK-TGMGCVSSSVL-NALLSVYVKRA 198
Query: 235 ------CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT------ 282
C ++ A ++F M +R+ ++++MI G+ + + A ++F MV+
Sbjct: 199 SELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258
Query: 283 -------------------------ETKPNGVTFIGVLTACSHVG-------LKCYGVSP 310
+ + +T+ +++AC++VG + Y +
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN 318
Query: 311 --STDHYAC------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPE 361
+ +H C ++ L + ++EA K+ MPV N W A+L G R E
Sbjct: 319 ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEE 377
Query: 362 IAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
A FE P K + ++ + A G D+ ++ + +++ G +
Sbjct: 378 -----AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/623 (36%), Positives = 315/623 (50%), Gaps = 86/623 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F N LW ++ Y L S ++ M+ GI P FT + + CT
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH+ +I GF SD+YV +I MY K L +RK+ + + +RDVVSWT +I
Sbjct: 362 IELGEQIHSLSIK-NGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 128 AYANNGDMESAGGLFNELP---------------------------------------LK 148
Y + E A F E+
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFE-------------------------------RMQ 177
D W +V Y + + EA F +M
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMS 540
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
AG + + T + ISA A L IK V A +G + V +ALI +Y KCGS
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH--TSETEVANALISLYGKCGS 598
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+DA IF M RN S++++I + HGR A+ LF M + KPN VTFIGVL A
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSHVGL YG++P DHYAC+VD+LGRAG L+ A + V++MP+ N
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM 718
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL AC++H+N EI ++AA HL ELEP +Y++LSN YA G W + +VR+++K
Sbjct: 719 IWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMK 778
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G++K PG SW+E + +H F GD HP S +I + L +L DRL GY+ ++
Sbjct: 779 DRGIRKEPGRSWIEV-KNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLF 837
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ E+K HSEKLA+AFGL+T P +R++KNLR+C+DCH +M S+V RE
Sbjct: 838 HEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRRE 897
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IV+RD RFHHF G CSCG+YW
Sbjct: 898 IVLRDVYRFHHFNSGSCSCGDYW 920
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 171/414 (41%), Gaps = 84/414 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W A++ GY +G K++ LY M + P + LS++ ACT+
Sbjct: 98 RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYV-------------------------- 99
+ G+ IHAQ + F S+ +VGN +I +Y+
Sbjct: 158 KLFAQGRMIHAQ-VYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTL 216
Query: 100 -----KCGFLGCSRKVFDEMP----ERDVVSWTELIVA---------------------- 128
+CG C+ ++FDEM D V+ L+ A
Sbjct: 217 ISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGM 276
Query: 129 -------------YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
Y GD+E+A +FN + V W M+ Y Q + ++ E F +
Sbjct: 277 SFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQ 336
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
MQ G+ + T ++ C G I+ + ++ +GF +++ V LIDMYSK
Sbjct: 337 MQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE--SDMYVSGVLIDMYSKY 394
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+D A +I +++R+V S++SMI G+ H A+ F +M P+ +
Sbjct: 395 RCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 296 TACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
+AC+ H + G + + +V+L R G EEA + ++
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI YA NG + A +F EL +D V+W AM++GY Q +EA + +M + V
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
L V+SAC + + + F + VG+ALI +Y GS A R+
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAF--CSETFVGNALIALYLGFGSFKLAERV 201
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M + +++++I G A G A+Q+F +M + +P+ VT +L AC+ VG
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG 259
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 321/553 (58%), Gaps = 22/553 (3%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ WT L+ + G L +S+ L+ MRR+ + ++ LF C ++ D+ QQ
Sbjct: 74 KDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG 133
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + +G TS + V N ++ MY KCG + +++F+E+ E+ VVSWT ++
Sbjct: 134 HGVAVKMGVLTS-VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVIS 193
+E +F+E+P ++ VAWT MV GY+ RE +E M + G ++VTL ++S
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 194 ACAQLGVIKYANWVCEIAEGSGF-----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
ACAQ G + WV A ++V+VG+AL+DMY+KCG+ID + +F M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------ 302
++RNV +++++ G AMHG+ I +F M++ E KP+ +TF VL+ACSH G
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 303 -----LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
L+ YG+ P DHYACMVDLLGRAG +EEA ++ +MPV PN V G+LLG+C +H
Sbjct: 372 RCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
EIA+ L ++ P I++SN+Y + G D +R L+ G++K PG S
Sbjct: 432 GKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSS 491
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD--EEKKR 475
+ + V H F +GD +HP + EI L ++++R+++ GY P++ ++ EEK++
Sbjct: 492 IYVNDSV-HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQ 550
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+ FGLL T P + + KNLRIC DCH M S+V REI++RD RFH
Sbjct: 551 ALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFH 610
Query: 536 HFQDGKCSCGNYW 548
F+ G CSC +YW
Sbjct: 611 QFKGGSCSCSDYW 623
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 65/339 (19%)
Query: 129 YANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA++G+M +A LF+E+PL KD V WT +++ + + +++ F M+ VE D V
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSG----FGPINNVVVGSALIDMYSKCGSIDDAY 242
++V + CA+L + +A +G G G + +V V +AL+DMY KCG + +
Sbjct: 113 SVVCLFGVCAKLEDLGFAQ------QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 243 RIFV-------------------------------GMKQRNVFSYSSMILGFAMHGRAHA 271
RIF M +RN +++ M+ G+ G
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 272 AIQLFGDMV-KTETKPNGVTFIGVLTACSHVG------------LK---CYGVSPSTDHY 315
++L +MV + N VT +L+AC+ G LK G S D
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 316 ---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLF 371
+VD+ + G ++ ++ + M + N W AL +H + + + +
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR 345
Query: 372 ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
E++PD + +LS + +G+ D+ R L+ GL+
Sbjct: 346 EVKPDDLTFTAVLSAC-SHSGIVDEGWRCFHSLRFYGLE 383
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 18/289 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
R VF ++ +N WT ++ GY+ G ++ + L M R G G TL ++ AC +
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 65 VLDVSLGQQIHA----QTILLGGFTS--DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
++ +G+ +H + +++G S D+ VG ++ MY KCG + S VF M +R+
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLK---DKVAWTAMVTGYVQNAKPREAIEYFER 175
VV+W L A +G +F ++ + D + +TA+++ + E F
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+++ G+E ++ + G+I+ A EI P N VV+GS L+ S
Sbjct: 377 LRFYGLEPKVDHYACMVDLLGRAGLIEEA----EILMREMPVPPNEVVLGS-LLGSCSVH 431
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMH---GRAHAAIQLFGDMVK 281
G ++ A RI + Q + + IL M+ GR+ A L G + K
Sbjct: 432 GKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRK 480
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 337/572 (58%), Gaps = 31/572 (5%)
Query: 3 SFPRLVFEQV--KYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREGIGPVSFTLSALF 59
S R +F Q+ +K+ WT L+ + G + + MR+EG+ + ++F
Sbjct: 70 SSARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVF 129
Query: 60 KACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
CT V D+ +G+Q AQ L+ G + V N ++ MYVKCG + R+VF EM ER+
Sbjct: 130 VLCTRVEDLGMGRQ--AQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERN 187
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VVSW+ L+ +E+ +F+E+P +++V WT M+ GYV N RE + M
Sbjct: 188 VVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVL 247
Query: 179 A-GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ ++VTL ++SACAQ G + WV + G G +++VG+AL+DMY+KCG
Sbjct: 248 RFRLGLNFVTLSSILSACAQSGDVLMGRWV-HVYALKGMGREMHIMVGTALVDMYAKCGP 306
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
ID A+++F + +RNV ++++M+ G AMHGR + +F M++ E KP+ +TF+ VL+A
Sbjct: 307 IDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIE-EAKPDDLTFMAVLSA 365
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH GL YG +P +HYACMVD+LGRAG LEEA+ +++KMP+ PN
Sbjct: 366 CSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEV 425
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
V G+LLG+C H ++ + L +++ +++LSN+Y G D + +R++LK
Sbjct: 426 VLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILK 485
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G++K PG S + G IH+F AGD +HP + EI AL +++ RL+ GY PN + +
Sbjct: 486 SKGIRKVPGVSSIYVG-GNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQV 544
Query: 466 YDVSD---------EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
+ SD EEK++ L HSEKLA+ FG ++T PGA + I KNLRIC+DCH +
Sbjct: 545 FPGSDGREGSSEEMEEKEQALFLHSEKLAVCFGHISTKPGAPLYIFKNLRICQDCHSAIK 604
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ REIV+RD RFH F+ G CSC +YW
Sbjct: 605 IVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/554 (36%), Positives = 323/554 (58%), Gaps = 24/554 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ ++ + W +LI G + G +D++ L+ MRR + F L + C+
Sbjct: 333 KRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGP 392
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S G+ +H TI G S VGN +I MY KCG + VF MP R+ +SWT +
Sbjct: 393 DYASTGELLHGYTIK-SGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAM 451
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A++ +GD+ A G F+ +P ++ V W +M++ YVQN E ++ + M+ GV+ D+
Sbjct: 452 ITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDW 511
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T I ACA L ++K V + + FG NV V ++++ MYS+CG I +A F
Sbjct: 512 ITFTTSIRACADLAIVKLGMQV--VTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTF 569
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +++ S+++M+ FA +G I F DM+KTE KPN ++++ VL+ CSH+GL
Sbjct: 570 DSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVA 629
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+SP+ +H++CMVDLLGRAG LE+A ++E MP +PN VW ALLG+
Sbjct: 630 EGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGS 689
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H + +A+ AA L EL+ + Y++LSN+Y+ +G D+V+ +R+L+K+ G++ +
Sbjct: 690 CRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSR 749
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E D V H F + +HP E+ L +++ ++ G + S ++
Sbjct: 750 GCSWIEVDNRV-HVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVH------- 801
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
R HSEKLA AFGLL + +MKNLR+C+DCHL + S V RE+++RD R
Sbjct: 802 -RSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYR 860
Query: 534 FHHFQDGKCSCGNY 547
FHHF+DG CSC +Y
Sbjct: 861 FHHFKDGICSCKDY 874
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 177/382 (46%), Gaps = 25/382 (6%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACTEVLD 67
V+ K+ WT +I GY G S + M R+ G F+ +++ KAC + D
Sbjct: 102 VRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGD 161
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
L Q+HA LG F + + N+++GMYVKCG + + VF ++ + W +I
Sbjct: 162 SRLAIQLHALVSKLG-FGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIY 220
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ A +FN +P +D+V+W +++ + Q+ + + F M G +++T
Sbjct: 221 GYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMT 280
Query: 188 LVGVISACAQLGVIKY-ANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+SACA +K+ A+ I ++V G+ LIDMY+KCG +D A R+F
Sbjct: 281 YGSVLSACASTSDLKWGAHLHARILR---MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFK 337
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------- 299
+++ + S++S+I G G A+ LF M ++ + +L CS
Sbjct: 338 SLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAST 397
Query: 300 ----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
H G+ S ++ + + G ++A + MP+ N W A++ A
Sbjct: 398 GELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA-- 454
Query: 356 IHRNPEIAQIAANHLFELEPDK 377
R+ +I + A F++ P++
Sbjct: 455 FSRSGDIGK--ARGYFDMMPER 474
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 175/381 (45%), Gaps = 51/381 (13%)
Query: 59 FKACTEVLDV-SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
FK C+ + +++HAQ ++L G S L++ N ++ MY CG + +VF E R
Sbjct: 14 FKQCSFTHKSPHIARKLHAQ-LILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHR 72
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFER 175
++ +W +I A ++ M A LF+E+P +KD V+WT M++GY QN + E F
Sbjct: 73 NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132
Query: 176 M----QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGP---INNVVVGSAL 228
M G D + V+ AC LG + A + + GFG I N VVG
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG--- 189
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
MY KCG +D A +F +++ ++F ++SMI G++ + A+Q+F M + +
Sbjct: 190 --MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDE---- 243
Query: 289 VTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
V++ +++ S G +GV CL ++M + PN +G
Sbjct: 244 VSWNTLISIFSQHG---FGVQ-----------------CLAMFVEMCNQ-GFSPNFMTYG 282
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPD---KIGNYIILSNIYASAGMWDDVSRVRRLLK 405
++L AC + + + +E GN +I ++YA G D RV +
Sbjct: 283 SVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLI--DMYAKCGCLDLAKRVFK--- 337
Query: 406 MTGLKKNPGYSWLEGDRGVIH 426
L+++ SW GV+H
Sbjct: 338 --SLREHDHISWNSLITGVVH 356
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 23/361 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ ++ W LI + G ++++ M +G P T ++ AC D
Sbjct: 234 IFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSD 293
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +HA+ IL + DL GN +I MY KCG L +++VF + E D +SW LI
Sbjct: 294 LKWGAHLHAR-ILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLIT 352
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ----YAGVET 183
+ G E A LFN++ V ++ + + E + +G+ +
Sbjct: 353 GVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGS 412
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+I+ A+ G A+ V + P+ N + +A+I +S+ G I A
Sbjct: 413 SAPVGNAIITMYAKCGDTDKADLVFRLM------PLRNTISWTAMITAFSRSGDIGKARG 466
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F M +RN+ +++SM+ + +G + ++L+ M +P+ +TF + AC+ + +
Sbjct: 467 YFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAI 526
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G+S + +V + R G ++EA + + + + W A+L
Sbjct: 527 VKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLA 585
Query: 353 A 353
A
Sbjct: 586 A 586
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 328/553 (59%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ + W+ +I Y +++I ++C MRR + P FTL++L +AC ++D
Sbjct: 303 VFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVD 362
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG QIH + +G +++V N ++ MY KCG
Sbjct: 363 LQLGNQIHCHVVKVG-LDMNVFVSNALMDMYAKCG------------------------- 396
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME++ LF+E P V+W ++ GYVQ +A+ F+ M V+ VT
Sbjct: 397 ------RMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVT 450
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA + ++ + + ++ + + N VVG+ALIDMY+KCG+I DA +F
Sbjct: 451 YSSVLRACAGIAALEPGSQIHSLSVKTIYD--KNTVVGNALIDMYAKCGNIKDARLVFDM 508
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+++ + S+++MI G+++HG A++ F M++TE KP+ VTF+G+L+ACS+ GL
Sbjct: 509 LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y + P +HY CMV LLGR+G L++A K+V ++P EP+ VW ALL AC
Sbjct: 569 QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACV 628
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH + E+ +I+A + E+EP+ +++LSNIYA+A W +V+ +R +K G++K PG
Sbjct: 629 IHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGL 688
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++G +H F GD +HP++ I L L + + +GY P+ SVL DV D +K++
Sbjct: 689 SWIE-NQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQ 747
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LALA+GL+ T + +RI+KNLRIC DCH + S+++ R+I++RD RFH
Sbjct: 748 RLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFH 807
Query: 536 HFQDGKCSCGNYW 548
HF +G CSCG+YW
Sbjct: 808 HFHEGICSCGDYW 820
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 196/404 (48%), Gaps = 51/404 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ ++YK+ WT ++ Y+ ++S+ L+ MR G P +FT +++ KAC +
Sbjct: 200 RQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGL 259
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++G+ +H + +L+VG +I +Y+K
Sbjct: 260 EVFNVGKAVHG-CAFKTSYLEELFVGVELIDLYIK------------------------- 293
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+GD++ A +F E+P D + W+ M+ Y Q+ + EAIE F RM+ V +
Sbjct: 294 ------SGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQ 347
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL ++ ACA L ++ N + C + + G NV V +AL+DMY+KCG ++++ ++
Sbjct: 348 FTLASLLQACASLVDLQLGNQIHCHVVK---VGLDMNVFVSNALMDMYAKCGRMENSLQL 404
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV--- 301
F S++++I+G+ G A+ LF DM++ + + VT+ VL AC+ +
Sbjct: 405 FSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAAL 464
Query: 302 --GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + + +S T + ++D+ + G +++A ++V M E + W A++
Sbjct: 465 EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISG 523
Query: 354 CQIHRNPEIAQIAANHLFELE--PDKIGNYIILSNIYASAGMWD 395
+H A + E E PDK+ ILS ++AG+ D
Sbjct: 524 YSVHGLYGEALKTFESMLETECKPDKVTFVGILSAC-SNAGLLD 566
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 47/351 (13%)
Query: 2 DSFPRL--VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALF 59
DS P +F+++ +N + LI+GY ++I L+ ++ EG F S +
Sbjct: 93 DSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
K LG +HA LG F SD +VG +I Y CG+ C+R+V
Sbjct: 153 KLLVSAEWAKLGFSVHACVYKLG-FDSDAFVGTALIDCYSVCGYAECARQV--------- 202
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
F+ + KD V+WT MV YV+N E+++ F RM+
Sbjct: 203 ----------------------FDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIV 240
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G + + T V+ AC L V V A + + + + VG LID+Y K G +D
Sbjct: 241 GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSY--LEELFVGVELIDLYIKSGDVD 298
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA ++F M + +V +S MI +A ++ AI++F M + PN T +L AC+
Sbjct: 299 DALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACA 358
Query: 300 HV-------GLKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMP 339
+ + C+ V D ++D+ + G +E +L++ + P
Sbjct: 359 SLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ ++ + W A+I GY + G +++ + SM P T + AC+
Sbjct: 503 RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNA 562
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ GQ + M+ + + G L + K+ E+P E V+ W
Sbjct: 563 GLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRA 622
Query: 125 LIVAYANNGDME 136
L+ A + D+E
Sbjct: 623 LLSACVIHNDVE 634
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/542 (37%), Positives = 314/542 (57%), Gaps = 48/542 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GYI + ++ + M GI TL+ KA ++++ G+QI A I
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
LG F +DL+V + ++ MY+KCG DM +A
Sbjct: 1127 KLG-FNNDLWVSSGVLDMYIKCG-------------------------------DMPNAL 1154
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF E+ D+VAWT M++GY++N A+ + M+ +GV+ D T +I A + L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + + + VG++L+DMY KCGS+ DAYR+F M R V +++M
Sbjct: 1215 ALEQGKQIHANVVKLDYSL--DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
+LG A HG A+ LF M +P+ VTFIGVL+ACSH GL K YG
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
++P +HY+C+VD LGRAG ++EA ++ MP + + ++ ALLGAC+ + E A+ A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ L L+P Y++LSNIYA++ WDDV+ R ++K+ +KK+PG+SW++ + +H
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDV-KNKVHL 1451
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADG-YQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F D +HP ++ I + + DL+ R++ +G Y P+ L DV +EEK+R L HSEKLA+
Sbjct: 1452 FVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAI 1511
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL++T P AT+R++KNLR+C DCH + S++ REIV+RD RFHHF++G CSCG+
Sbjct: 1512 AFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571
Query: 547 YW 548
YW
Sbjct: 1572 YW 1573
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 51/382 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---EVLDVSLGQQIHA 76
W +I Y ++I + + R+G+ P FTL+++ +AC+ E +LG Q+H
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
I KCG + D T LI Y+ G M+
Sbjct: 1023 YAI--------------------KCGIIN------------DSFVSTALIDLYSKGGKMD 1050
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A L + D +W A++ GY+++ K R+A+E+F M G+ D +TL I A
Sbjct: 1051 EAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASG 1110
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
L +K + A GF N++ V S ++DMY KCG + +A +F + + + ++
Sbjct: 1111 CLINLKQGKQIQAYAIKLGFN--NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAW 1168
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---------HVGLKCYG 307
++MI G+ +G A+ ++ M + +P+ TF ++ A S +
Sbjct: 1169 TTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK 1228
Query: 308 VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA-LLGACQI-HRNPEIA 363
+ S DH+ +VD+ + G +++A ++ KM V W A LLG Q H + +
Sbjct: 1229 LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEALN 1287
Query: 364 QIAANHLFELEPDKIGNYIILS 385
++PDK+ +LS
Sbjct: 1288 LFRTMQSNGIQPDKVTFIGVLS 1309
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 79/396 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY----------ILQGHLKDSISLYCSMRREGIGPVSFTL 55
R VF++ ++ W +++ Y +L+G L+ +R G TL
Sbjct: 666 RQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEG-----FRLFGLLREFGFSITRLTL 720
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ L K C V + + +H + +G F DL+V ++ +Y K G +G +R +FD+MP
Sbjct: 721 APLLKLCLLSGFVQVSETVHGYAVKIG-FELDLFVSGALVNIYCKYGLVGQARLLFDKMP 779
Query: 116 ERDVVSWTELIVAYANNGDMESA-----------------------GGLFNELPLKDK-- 150
ERD V W ++ AY N + A GG+ +++ K
Sbjct: 780 ERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRH 839
Query: 151 --------------------VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
AW +T ++ + AI+ F+ + + + D VTLV
Sbjct: 840 AEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++SA + + + S F P+ V V ++L++MYSK G + A + F+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPV--VPVSNSLMNMYSKAGVVYAAEKTFINSPE 957
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----------- 299
++ S+++MI +A + AI F D+++ KP+ T VL ACS
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 300 ---HV-GLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
HV +KC G+ + ++DL + G ++EA
Sbjct: 1018 SQVHVYAIKC-GIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ + WT +I GYI G ++S+Y MR G+ P +T + L KA + +
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA + L ++ D +VG +++ MY KCG + + +VF +M R VV W +++
Sbjct: 1216 LEQGKQIHANVVKL-DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +G ++ EA+ F MQ G++ D VT
Sbjct: 1275 GLAQHGHVD-------------------------------EALNLFRTMQSNGIQPDKVT 1303
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+GV+SAC+ G+ A + A +G + S L+D + G I +A +
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFD-AMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362
Query: 248 MKQRNVFSYSSMILG 262
M + S +LG
Sbjct: 1363 MPFKASASMYRALLG 1377
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M FP F+Q N F W + ++ G + +I + ++ R IG S TL +
Sbjct: 848 MKMFP---FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A D+ LG+QIHA ++ F + V N+++ MY K G + + K F PE D++
Sbjct: 903 AAVGADDLDLGEQIHA-LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S W M++ Y QN EAI F + G
Sbjct: 962 S-------------------------------WNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ D TL V+ AC+ +Y ++ G IN+ V +ALID+YSK G +D
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMD 1050
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A + G ++ S+++++ G+ ++ A++ F M + + +T + A
Sbjct: 1051 EAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
++ + D+ LG++ HA+ I+ G D Y+ N +I MY KCG L +R+VFD+ +RD+
Sbjct: 619 RSAIAMADLKLGKRAHAR-IVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDL 677
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
V+W ++ AYA D L E F ++
Sbjct: 678 VTWNSILAAYAQFADSSYENVL--------------------------EGFRLFGLLREF 711
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G +TL ++ C G ++ + V A GF ++ V AL+++Y K G +
Sbjct: 712 GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL--DLFVSGALVNIYCKYGLVG 769
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
A +F M +R+ ++ M+ + + A++ F ++ P+
Sbjct: 770 QARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD 817
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 322/553 (58%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ + W+ +I Y K+++ L+ MR+ + P +FT +++ +AC +
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH+ +L G S+++V N ++ +Y KCG
Sbjct: 354 LDLGKQIHS-CVLKFGLNSNVFVSNAIMDVYAKCG------------------------- 387
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E++ LF ELP ++ V W ++ GYVQ A+ F M ++ VT
Sbjct: 388 ------EIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVT 441
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ A A L ++ + + + + + VV ++LIDMY+KCG I+DA F
Sbjct: 442 YSSVLRASASLAALEPGLQIHSLTIKTMYN--KDTVVANSLIDMYAKCGRINDARLTFDK 499
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +R+ S+++MI G++MHG + A+ LF M T+ KPN +TF+GVL+ACS+ GL
Sbjct: 500 MNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K Y + P +HY CMV LLGR G +EA+K++ ++ +P+ VW ALLGAC
Sbjct: 560 QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACV 619
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+ ++ ++ A H+ E+EP +++LSN+YA+AG WD+V+ VR+ ++ ++K PG
Sbjct: 620 IHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGL 679
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++GV+H F GD +HP+ I L L + + GY P+ +VL DV D+EK+R
Sbjct: 680 SWVE-NQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKER 738
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LALA+GL+ T ++RI+KNLRIC DCH M S+V+ REIV+RD RFH
Sbjct: 739 HLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFH 798
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSCG+YW
Sbjct: 799 HFRHGVCSCGDYW 811
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 178/365 (48%), Gaps = 50/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT ++ Y ++S+ L+ MR G P +FT+S K+C +
Sbjct: 191 RHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGL 250
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++G+ +H L G + DL+VG ++ +Y K G + ++++F+EMP+ D++ W+ +
Sbjct: 251 EAFNVGKSVHG-CALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLM 309
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA Q+ + +EA++ F RM+ V +
Sbjct: 310 IARYA-------------------------------QSDRSKEALDLFLRMRQTSVVPNN 338
Query: 186 VTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T V+ ACA + + C + FG +NV V +A++D+Y+KCG I+++ +
Sbjct: 339 FTFASVLQACASSVSLDLGKQIHSCVLK----FGLNSNVFVSNAIMDVYAKCGEIENSMK 394
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-- 301
+F + RN +++++I+G+ G A+ LF M++ + +P VT+ VL A + +
Sbjct: 395 LFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAA 454
Query: 302 ---GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
GL+ + ++ T + ++D+ + G + +A +KM + + W A++
Sbjct: 455 LEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMIC 513
Query: 353 ACQIH 357
+H
Sbjct: 514 GYSMH 518
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 46/355 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ N + L +GY ++ + +EG F + L K +
Sbjct: 92 LFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDL 151
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
L +HA LG +D +VG T LI
Sbjct: 152 AHLCWTLHACVYKLGHH-ADAFVG-------------------------------TALID 179
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY+ G+++ A +F+++ KD V+WT MV Y +N E+++ F +M+ G + + T
Sbjct: 180 AYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFT 239
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G + +C L V A + +++ VG AL+++Y+K G I DA R+F
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYD--HDLFVGIALLELYAKSGEIIDAQRLFEE 297
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
M + ++ +S MI +A R+ A+ LF M +T PN TF VL AC+
Sbjct: 298 MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG 357
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + +G++ + ++D+ + G +E ++K+ E++P + N W ++
Sbjct: 358 KQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNTII 411
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 49/282 (17%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +H IL G + DL+ N ++ YV+ L + K+FDEMP+ + +S+ L
Sbjct: 54 GKHLHCH-ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTL----- 107
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
GY ++ + +A+ + R+ G E +
Sbjct: 108 --------------------------AQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTT 141
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++ + + + W A G + VG+ALID YS G++D A +F +
Sbjct: 142 LLKLLVSMD-LAHLCWTLH-ACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICC 199
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP 310
+++ S++ M+ +A + ++QLF M KPN T G L +C +GL+ + V
Sbjct: 200 KDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC--LGLEAFNVGK 257
Query: 311 ST---------DHY----ACMVDLLGRAGCLEEALKMVEKMP 339
S DH +++L ++G + +A ++ E+MP
Sbjct: 258 SVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/542 (37%), Positives = 314/542 (57%), Gaps = 48/542 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GYI + ++ + M GI TL+ KA ++++ G+QI A I
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
LG F +DL+V + ++ MY+KCG DM +A
Sbjct: 1127 KLG-FNNDLWVSSGVLDMYIKCG-------------------------------DMPNAL 1154
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF E+ D+VAWT M++GY++N A+ + M+ +GV+ D T +I A + L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + + + VG++L+DMY KCGS+ DAYR+F M R V +++M
Sbjct: 1215 ALEQGKQIHANVVKLDYSL--DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
+LG A HG A+ LF M +P+ VTFIGVL+ACSH GL K YG
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
++P +HY+C+VD LGRAG ++EA ++ MP + + ++ ALLGAC+ + E A+ A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ L L+P Y++LSNIYA++ WDDV+ R ++K+ +KK+PG+SW++ + +H
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDV-KNKVHL 1451
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADG-YQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F D +HP ++ I + + DL+ R++ +G Y P+ L DV +EEK+R L HSEKLA+
Sbjct: 1452 FVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAI 1511
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL++T P AT+R++KNLR+C DCH + S++ REIV+RD RFHHF++G CSCG+
Sbjct: 1512 AFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571
Query: 547 YW 548
YW
Sbjct: 1572 YW 1573
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 51/382 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---EVLDVSLGQQIHA 76
W +I Y ++I + + R+G+ P FTL+++ +AC+ E +LG Q+H
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
I KCG + D T LI Y+ G M+
Sbjct: 1023 YAI--------------------KCGIIN------------DSFVSTALIDLYSKGGKMD 1050
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
A L + D +W A++ GY+++ K R+A+E+F M G+ D +TL I A
Sbjct: 1051 EAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASG 1110
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
L +K + A GF N++ V S ++DMY KCG + +A +F + + + ++
Sbjct: 1111 CLINLKQGKQIQAYAIKLGFN--NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAW 1168
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---------HVGLKCYG 307
++MI G+ +G A+ ++ M + +P+ TF ++ A S +
Sbjct: 1169 TTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK 1228
Query: 308 VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA-LLGACQI-HRNPEIA 363
+ S DH+ +VD+ + G +++A ++ KM V W A LLG Q H + +
Sbjct: 1229 LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEALN 1287
Query: 364 QIAANHLFELEPDKIGNYIILS 385
++PDK+ +LS
Sbjct: 1288 LFRTMQSNGIQPDKVTFIGVLS 1309
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 79/396 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY----------ILQGHLKDSISLYCSMRREGIGPVSFTL 55
R VF++ ++ W +++ Y +L+G L+ +R G TL
Sbjct: 666 RQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEG-----FRLFGLLREFGFSITRLTL 720
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ L K C V + + +H + +G F DL+V ++ +Y K G +G +R +FD+MP
Sbjct: 721 APLLKLCLLSGFVQVSETVHGYAVKIG-FELDLFVSGALVNIYCKYGLVGQARLLFDKMP 779
Query: 116 ERDVVSWTELIVAYANNGDMESA-----------------------GGLFNELPLKDK-- 150
ERD V W ++ AY N + A GG+ +++ K
Sbjct: 780 ERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRH 839
Query: 151 --------------------VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
AW +T ++ + AI+ F+ + + + D VTLV
Sbjct: 840 AEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++SA + + + S F P+ V V ++L++MYSK G + A + F+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPV--VPVSNSLMNMYSKAGVVYAAEKTFINSPE 957
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----------- 299
++ S+++MI +A + AI F D+++ KP+ T VL ACS
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 300 ---HV-GLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
HV +KC G+ + ++DL + G ++EA
Sbjct: 1018 SQVHVYAIKC-GIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ + WT +I GYI G ++S+Y MR G+ P +T + L KA + +
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA + L ++ D +VG +++ MY KCG + + +VF +M R VV W +++
Sbjct: 1216 LEQGKQIHANVVKL-DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +G ++ EA+ F MQ G++ D VT
Sbjct: 1275 GLAQHGHVD-------------------------------EALNLFRTMQSNGIQPDKVT 1303
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+GV+SAC+ G+ A + A +G + S L+D + G I +A +
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFD-AMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362
Query: 248 MKQRNVFSYSSMILG 262
M + S +LG
Sbjct: 1363 MPFKASASMYRALLG 1377
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M FP F+Q N F W + ++ G + +I + ++ R IG S TL +
Sbjct: 848 MKMFP---FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A D+ LG+QIHA ++ F + V N+++ MY K G + + K F PE D++
Sbjct: 903 AAVGADDLDLGEQIHA-LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S W M++ Y QN EAI F + G
Sbjct: 962 S-------------------------------WNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSID 239
++ D TL V+ AC+ +Y ++ G IN+ V +ALID+YSK G +D
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMD 1050
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A + G ++ S+++++ G+ ++ A++ F M + + +T + A
Sbjct: 1051 EAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
++ + D+ LG++ HA+ I+ G D Y+ N +I MY KCG L +R+VFD+ +RD+
Sbjct: 619 RSAIAMADLKLGKRAHAR-IVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDL 677
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
V+W ++ AYA D L E F ++
Sbjct: 678 VTWNSILAAYAQFADSSYENVL--------------------------EGFRLFGLLREF 711
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G +TL ++ C G ++ + V A GF ++ V AL+++Y K G +
Sbjct: 712 GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL--DLFVSGALVNIYCKYGLVG 769
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
A +F M +R+ ++ M+ + + A++ F ++ P+
Sbjct: 770 QARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD 817
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 318/559 (56%), Gaps = 56/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF+ + +N W +I GY G +++ + + M EG+ P + ++ AC +
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANL 357
Query: 66 LDVSLGQQIHAQTILLG----GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
D+ G+ +H LL GF D+ V N++I MY KC
Sbjct: 358 GDLERGRYVHR---LLDEKKIGF--DVSVMNSLISMYSKCK------------------- 393
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
++ A +F L K V W AM+ GY QN EA+ F MQ +
Sbjct: 394 ------------RVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDI 441
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D TLV VI+A A L V + A W+ +A + NV V +ALID ++KCG+I A
Sbjct: 442 KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMD--KNVFVCTALIDTHAKCGAIQTA 499
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M++R+V ++++MI G+ +G A+ LF +M KPN +TF+ V+ ACSH
Sbjct: 500 RKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHS 559
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + YG+ P+ DHY MVDLLGRAG L++A K ++ MPV+P V GA
Sbjct: 560 GLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGA 619
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC+IH+N E+ + A+ LF+L+PD G +++L+N+YASA MWD V+RVR ++ G+
Sbjct: 620 MLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGI 679
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG S +E R +H F +G HP S I L L D ++A GY P+ S+ +DV
Sbjct: 680 QKTPGCSLVEL-RNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVE 737
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
++ K+++L +HSE+LA+AFGLL T G + I KNLR+C DCH S V GREI+VR
Sbjct: 738 EDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVR 797
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF++G CSCG+YW
Sbjct: 798 DLRRFHHFKNGICSCGDYW 816
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 151/295 (51%), Gaps = 34/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE V++K L+ +++GY L+D++ Y MR + + PV + + L + E LD
Sbjct: 98 VFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLD 157
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH ++ GF S+L+ ++ +Y KC R++
Sbjct: 158 LRRGREIHGM-VITNGFQSNLFAMTAVVNLYAKC------RQI----------------- 193
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A +F +P +D V+W +V GY QN R A++ +MQ AG + D +T
Sbjct: 194 --------EDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSIT 245
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV V+ A A L ++ + A +GF + NV +A++D Y KCGS+ A +F G
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNV--ATAMLDTYFKCGSVRSARLVFKG 303
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M RNV S+++MI G+A +G + A F M+ +P V+ +G L AC+++G
Sbjct: 304 MSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG 358
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 46/355 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ ++ W ++ GY G + ++ + M+ G P S TL ++ A ++
Sbjct: 199 MFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+ IH GF + V M+ Y KCG + +R VF M R+V
Sbjct: 259 LRIGRSIHGYA-FRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNV-------- 309
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
V+W M+ GY QN + EA F +M GVE V+
Sbjct: 310 -----------------------VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS 346
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++G + ACA LG ++ +V + + G +V V ++LI MYSKC +D A +F
Sbjct: 347 MMGALHACANLGDLERGRYVHRLLDEKKIG--FDVSVMNSLISMYSKCKRVDIAASVFGN 404
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
+K + V ++++MILG+A +G + A+ LF +M + KP+ T + V+TA + + +
Sbjct: 405 LKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA 464
Query: 305 --CYGVSPST----DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G++ T + + C ++D + G ++ A K+ + M E + W A++
Sbjct: 465 KWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ-ERHVITWNAMI 518
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+LI + + A +F + K V + M+ GY +N+ R+A+ ++ERM+ V
Sbjct: 80 TKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVM 139
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++ + ++ + + +GF +N+ +A++++Y+KC I+DAY
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQ--SNLFAMTAVVNLYAKCRQIEDAY 197
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M QR++ S+++++ G+A +G A A+Q+ M + KP+ +T + VL A +
Sbjct: 198 KMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVA--D 255
Query: 303 LKCYGVSPSTDHYA 316
LK + S YA
Sbjct: 256 LKALRIGRSIHGYA 269
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 330/558 (59%), Gaps = 51/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ W +I G G ++++++ M +E + P SFTLS++ TE
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+V+ G++IH I GF D+++G+++I MY KC + EL
Sbjct: 213 ANVTKGKEIHGYAIR-HGFDKDVFIGSSLIDMYAKC-------------------TQVEL 252
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
V F+ L +D ++W +++ G VQN + + + +F RM V+
Sbjct: 253 SVC------------AFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQ 300
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ VI ACA L + + GF +N + S+L+DMY+KCG+I A IF
Sbjct: 301 VSFSSVIPACAHLTALNLGKQLHAYIIRLGFD--DNKFIASSLLDMYAKCGNIKMARYIF 358
Query: 246 --VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+ M R++ S++++I+G AMHG A A+ LF +M+ KP V F+ VLTACSH GL
Sbjct: 359 NKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGL 418
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +GV+P +HYA + DLLGRAG LEEA + M EP G VW LL
Sbjct: 419 VDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLL 478
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+ H+N E+A+ N + ++P +G ++I+SNIY++A W D +++R ++ TGLKK
Sbjct: 479 AACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKK 538
Query: 412 NPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
P SW+E G++ +H F AGD +HP +I +AL LL++++ +GY + VL+DV +
Sbjct: 539 TPACSWIEVGNK--VHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDE 596
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E K+ +L THSE+LA+AFG+++T+ G T+R++KN+R+C DCH + ++++GREI+VRD
Sbjct: 597 EHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRD 656
Query: 531 NMRFHHFQDGKCSCGNYW 548
N RFHHF++G CSCG+YW
Sbjct: 657 NSRFHHFKNGSCSCGDYW 674
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 34/355 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +I+ Y G L+ S++ + +R GI P +L +A T +L Q +HA I
Sbjct: 44 WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVI 103
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD----- 134
LG F DLY N ++ MY K E P+ A N+ +
Sbjct: 104 RLG-FHFDLYTANALMNMYSK---FHPHLSPLHEFPQ-----------ARHNHNNKYSVK 148
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
++S LF+ +P++D V+W ++ G QN EA+ + M + D TL ++
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
+ + + A GF +V +GS+LIDMY+KC ++ + F + R+
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFD--KDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAI 266
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYG 307
S++S+I G +GR + F M+K + KP V+F V+ AC+H+ L Y
Sbjct: 267 SWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYI 326
Query: 308 VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGV-WGALLGACQIH 357
+ D + ++D+ + G ++ A + K+ + V W A++ C +H
Sbjct: 327 IRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/568 (36%), Positives = 325/568 (57%), Gaps = 34/568 (5%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++P +F + + F L+R +L L ++L+ RR P SFT L +
Sbjct: 96 AYPLALFRRANSTSAFASNNLLR--VLPHPL--PLTLFSRFRRRN--PHSFTF--LLASI 147
Query: 63 TEVLDVS---------LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
+ L+ + LG +HA + G DL+V N ++ Y G +G R+VFDE
Sbjct: 148 SNHLNAAGPSASACSFLGSHVHALAVKAGA-AGDLFVRNALVHFYGVSGDVGAMRRVFDE 206
Query: 114 MPE-RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P RDV++W E++ Y G M A +F+E+P++D+++W+ +V GYV+ + A+
Sbjct: 207 LPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGV 266
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M GV + +V +SA A+LG++++ +V + + SG NV G+AL+DMY
Sbjct: 267 FRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNV--GAALVDMY 324
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG + A +F GM++R+VF++++MI G A HG A++LF + P VTF+
Sbjct: 325 AKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFV 384
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL CS GL + Y + P +HY CMVDLLGRAG + EA++++E M +
Sbjct: 385 GVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHI 444
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
P+ +WG +L +C+ H ++ N L EL+P G Y++LS IYA A WD+V V
Sbjct: 445 APDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREV 504
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R+L+ G K+ G+S +E G +H+F GD H +S +I L + RL GY P+
Sbjct: 505 RKLMSSRGTNKSAGWSLMEA-HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ SVL+D+ +EEK + HSE+LA+A+G + G+ +RI+KNLR+C DCH F +
Sbjct: 564 VSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTM 623
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V REI+VRD RFHH ++GKCSC +YW
Sbjct: 624 VFQREIIVRDGSRFHHMKEGKCSCLDYW 651
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 67/309 (21%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M + R VF+++ ++ W+ L+ GY+ + L+ ++ ++ +M +G+ P +
Sbjct: 228 MMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALS 287
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + + G+ +H + G + VG ++ MY KCG + +R+VFD M RDV
Sbjct: 288 AAARLGLLEHGKFVH-NVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVF 346
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W AM+ G + R+A+E FER G
Sbjct: 347 AW-------------------------------NAMICGLAAHGLGRDAVELFERFISEG 375
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ VT VGV++ C++ G+ +AEG + + I +
Sbjct: 376 LSPTNVTFVGVLNGCSRSGL---------VAEGRRYFKL------------------IVE 408
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
YRI M+ Y M+ G AI+L M P+ V + +L++C
Sbjct: 409 KYRIEPEMEH-----YGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCKT 460
Query: 301 VGLKCYGVS 309
GL GVS
Sbjct: 461 HGLVDLGVS 469
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 322/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G+ K+++ L+ M + I P T+ + AC +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I GF S+L + N+++ +Y KCG
Sbjct: 282 IELGRQVHSW-IDDHGFGSNLKIVNSLMDLYSKCG------------------------- 315
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 316 ------ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVT 369
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACA LG I W+ + N + ++LIDMY+KCG I+ A+++F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +++ S+++MI GFAMHGRA AA +F M K +P+ +TF+G+L+ACS G+
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG 489
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 490 RHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACK 549
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
I N E+ + A +L ++EP+ G Y++LSNIYA+AG W++V+++R LL G+KK PG
Sbjct: 550 IRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 609
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 610 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 221/403 (54%), Gaps = 20/403 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W + RG+ L ++ LY M G+ P S+T L K+C +
Sbjct: 90 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 149
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG + DL+V ++I +YV+ G L +RKVFD P RDVVS+T LI
Sbjct: 150 FKEGQQIHGHVLKLG-YDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIK 208
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G +ESA LF+E+P+KD V+W AM++GY + +EA+E F+ M + D T
Sbjct: 209 GYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDEST 268
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ G I+ V + GFG +N+ + ++L+D+YSKCG ++ A +F G
Sbjct: 269 MVTVVSACAQSGSIELGRQVHSWIDDHGFG--SNLKIVNSLMDLYSKCGELETACGLFEG 326
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ +PN VT + +L AC+H+G
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG 386
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + ++ ++D+ + G +E A ++ + + + W A++
Sbjct: 387 RWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGF 445
Query: 355 QIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWD 395
+H + A + + + +EPD I ++ L + + +GM D
Sbjct: 446 AMHGRADAAFDIFSRMRKIGIEPDDI-TFVGLLSACSRSGMLD 487
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 319/558 (57%), Gaps = 49/558 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I G+ G + ++ ++C MR G+ P TL +L A +
Sbjct: 225 RKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQC 284
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ +H + G D+ GN ++ MY K
Sbjct: 285 GDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS----------------------- 321
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
+E+A +F+ +P++D V+W ++TGY+QN EAI ++ MQ + G++
Sbjct: 322 --------KIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPI 373
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V V+ A + LG ++ + ++ +G +V VG+ +ID+Y+KCG +D+A +
Sbjct: 374 QGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL--DVYVGTCVIDLYAKCGKLDEAMLL 431
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F +R+ ++++I G +HG A+ LF M + P+ VTF+ +L ACSH GL
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG+ P HYACMVD+ GRAG L++A + MP++P+ +WGALLG
Sbjct: 492 DQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLG 551
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+ ++A+ +LFEL+P +G Y+++SN+YA G WD V VR L++ L+K
Sbjct: 552 ACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKT 611
Query: 413 PGYSWLEGDRGVIHEFRAGDL--THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
PG+S +E R V + F +G+ HP EIQ+ L DLL ++++ GY P+ VL DV +
Sbjct: 612 PGWSSIEVKRSV-NVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEE 670
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK++IL HSE+LA+AFG++ T P + I KNLR+C DCH S++ REI+VRD
Sbjct: 671 DEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRD 730
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF+DG CSCG++W
Sbjct: 731 SNRFHHFKDGYCSCGDFW 748
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 176/361 (48%), Gaps = 46/361 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+++++++ W A++ G +++ L+ M EG+ + T+S++ C + D
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+L +H + G +L+V N MI +Y K G L RKVFD M RD+V+W +I
Sbjct: 187 ALALAMHLYAVK-HGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSII-- 243
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+G+ Q + A+E F M+ +GV D +TL
Sbjct: 244 -----------------------------SGHEQGGQVASAVEMFCGMRDSGVSPDVLTL 274
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+ + SA AQ G I V G+ + +++ G+A++DMY+K I+ A R+F M
Sbjct: 275 LSLASAIAQCGDICGGRSVHCYMVRRGWD-VGDIIAGNAIVDMYAKLSKIEAAQRMFDSM 333
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHV-----G 302
R+ S++++I G+ +G A AI ++ M K E KP TF+ VL A SH+ G
Sbjct: 334 PVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQG 393
Query: 303 LKCYGVSPST----DHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ + +S T D Y C++DL + G L+EA+ + E+ P + G W A++ +
Sbjct: 394 TRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP-RRSTGPWNAVISGVGV 452
Query: 357 H 357
H
Sbjct: 453 H 453
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 17/307 (5%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D + L+ AY G + A F+E+ +D AW AM++G +NA+ EA+ F RM
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV D VT+ V+ C LG A + A G + + V +A+ID+Y K G
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLD--DELFVCNAMIDVYGKLGM 220
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+++ ++F GM R++ +++S+I G G+ +A+++F M + P+ +T + + +A
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 298 CSHVG-------LKCYGVSPSTD-----HYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
+ G + CY V D +VD+ + +E A +M + MPV +
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAV 339
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKI--GNYIILSNIYASAGMWDDVSRVRRL 403
W L+ + A +H+ + E K G ++ + Y+ G +R+ L
Sbjct: 340 SWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHAL 399
Query: 404 LKMTGLK 410
TGL
Sbjct: 400 SIKTGLN 406
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 329/557 (59%), Gaps = 21/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F+++ ++ W +++ + + ++S+ +M +G+ P F + + +AC+ +
Sbjct: 60 LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+Q+HA+ +L F D V +++I MY KCG +R VFD + ++ VSWT +I
Sbjct: 120 YLRLGKQVHAR-FMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMI 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDY 185
YA +G A LF + P+++ +WTA+++G +Q+ + F M+ G++ D
Sbjct: 179 SGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDP 238
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ L V+ CA L +++ + + GF + + +AL+DMY+KC I A IF
Sbjct: 239 LVLSSVVGGCANLALLELGKQIHGLVIALGFESC--LFISNALVDMYAKCSDILAAKDIF 296
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +++V S++S+I+G A HG+A A+ L+ +MV + KPN VTF+G+L ACSH GL
Sbjct: 297 YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVS 356
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y ++PS HY C++DLL R+G L+EA +++K+P +P+ W +LL A
Sbjct: 357 RGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C H N E+ A+ + +L+P+ YI+LSN+YA A MW VS+VR+L+ ++K P
Sbjct: 417 CMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEP 476
Query: 414 GYSWLE--GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
GYS ++ D V H + D HP EI L DL ++ GY PN VLYD+ +
Sbjct: 477 GYSSIDFGKDSQVFHAGESCD--HPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQ 534
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK++ L HSE+LA+A+GLL PG +RI+KNLRIC DCH + S ++ REI+VRD
Sbjct: 535 EKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDA 594
Query: 532 MRFHHFQDGKCSCGNYW 548
R+HHF++GKCSC ++W
Sbjct: 595 TRYHHFKEGKCSCNDFW 611
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 65/268 (24%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY-------------------------------ILQGHLK 34
R VF+ + +KN WT++I GY I GH
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219
Query: 35 DSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
S SL+ MRREGI V LS++ C + + LG+QIH I L GF S L++ N
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIAL-GFESCLFISNA 278
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY KC + ++ +F MP +DV+SWT +IV A +G E A L++E+ L
Sbjct: 279 LVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVL------ 332
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
KP E VT VG++ AC+ G++ + +
Sbjct: 333 --------SRIKPNE-----------------VTFVGLLYACSHAGLVSRGRELFR-SMT 366
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + ++ + L+D+ S+ G +D+A
Sbjct: 367 TDYSINPSLQHYTCLLDLLSRSGHLDEA 394
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ C S ++H+Q I+ GF + NT++ +Y KCG + P+
Sbjct: 10 LQLCARRQSASAAGELHSQ-IIKAGFDKSSLLSNTLLDVYGKCGLI----------PQ-- 56
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-Q 177
A LF+E+P +D V+W +++T + + PR + M
Sbjct: 57 -------------------ALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFT 97
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ G++ D+ ++ AC+ LG ++ V S F ++ VV S+LIDMY+KCG
Sbjct: 98 HDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXF--CDDEVVKSSLIDMYTKCGQ 155
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
D+A +F + +N S++SMI G+A GR A+ LF
Sbjct: 156 PDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLF 194
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/624 (34%), Positives = 330/624 (52%), Gaps = 84/624 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I GY+ H +D++ L+ M EG+ P + T + KAC +
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 66 LDVSLGQQIH------------------------------AQTILLGGFTSDLYVGNTMI 95
+ G+++H A+ I D+ MI
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202
Query: 96 GMYVKCG---------------------------FLGCS------------RKVFDEMPE 116
G Y + G C+ R D E
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
DV T L+ YA +G ++ A +F+ + ++D V+W M+ + ++ + EA + F +M
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
Q G + D + + +++ACA G +++ + A SG +V VG+AL+ MYSK G
Sbjct: 323 QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV--DVRVGTALVHMYSKSG 380
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
SIDDA +F MK RNV S+++MI G A HG A+++F M KP+ VTF+ VL+
Sbjct: 381 SIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLS 440
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL + YG+ P H CMVDLLGRAG L EA ++ M V+P+
Sbjct: 441 ACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDE 500
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
WGALLG+C+ + N E+ ++ A +L+P Y++LSNIYA AG WD VS VR ++
Sbjct: 501 ATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMM 560
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
+ G++K PG SW+E D IH+F D +HP EI ++ ++++++A+GY P+ R V
Sbjct: 561 RERGIRKEPGRSWIEVDNK-IHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLV 619
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L + + ++K+ + +HSEKLA+ +GL+ T PG +R+ KNLR+C DCH S+V GR
Sbjct: 620 LKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGR 679
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI+VRD RFHHF+DG CSCG+YW
Sbjct: 680 EIIVRDANRFHHFKDGVCSCGDYW 703
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 178/391 (45%), Gaps = 49/391 (12%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
L ++I + + + G+ SF + K C + D+ +Q+H I+ + +V N
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVH-DCIIKSRMEQNAHVMN 67
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
++ +Y++CG L +R VFD + + K +
Sbjct: 68 NLLHVYIECGRLQEARCVFDALVK-------------------------------KSGAS 96
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W AM+ GYV++ +A+ F M + GV+ + T + ++ ACA L +K+ V
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
G ++V VG+AL+ MY KCGSI++A RIF + ++ S++ MI +A G A
Sbjct: 157 HGGLE--SDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEA 214
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY-----------GVSPSTDHYACMVDL 321
+L M + KPN +T++ +L AC+ G + G+ +V +
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM 274
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFE-LEPDKIG 379
++G +++A + ++M V + W ++GA H R E + E +PD I
Sbjct: 275 YAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAI- 332
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
++ + N ASAG + V ++ R +GL+
Sbjct: 333 MFLSILNACASAGALEWVKKIHRHALDSGLE 363
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/595 (36%), Positives = 349/595 (58%), Gaps = 55/595 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF++V +++ W ++I YI G K++I +Y M +GI P FT S++FKA +
Sbjct: 129 YARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFS 188
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ V GQ+ H Q+++LG S+++VG+ ++ MY K G + +R V D++ +DVV +T
Sbjct: 189 DLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFT 248
Query: 124 ELIVAYANNGD----------MESAG----------------------------GLFNEL 145
LIV Y+++G+ M G GL +
Sbjct: 249 ALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA 308
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
L+ V WT+++ G VQN + A+ F +M + + + TL V+ AC+ L +++
Sbjct: 309 GLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGK 368
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ I FG + VG+ALID Y KCGS + A +F G+ + +V S +SMI +A
Sbjct: 369 QIHAIV--MKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQ 426
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---KCY---------GVSPSTD 313
+G H A+QLF M T +PN VT++GVL+AC++ GL C+ + + D
Sbjct: 427 NGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKD 486
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL 373
HYACMVDLLGRAG L+EA ++ ++ + + +W LL AC+IH + E+A+ N + +L
Sbjct: 487 HYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDL 545
Query: 374 EPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
P+ G +++LSN+YAS G W V ++ ++ LKKNP SW++ +R IH F AGD
Sbjct: 546 APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVERE-IHTFMAGDW 604
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
+HPN +I++ L +L+++++ GY P+ R VL D+ +E+K R L HSEKLA+AF L +
Sbjct: 605 SHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRS 664
Query: 494 S-PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+ T+RI+KNLR+C DCH +M S+++GR+I+ RD RFHHF++G CSCG+Y
Sbjct: 665 NYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 185/434 (42%), Gaps = 102/434 (23%)
Query: 33 LKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGN 92
+S+ LY S+ ++ IG K+ T++ + Q HA L GF L GN
Sbjct: 74 FSESLQLYSSLIQQCIG---------IKSITDITKI----QSHA---LKRGFHHSL--GN 115
Query: 93 TMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+I Y+KCG + +RKVF +E+P + VA
Sbjct: 116 KLIDAYLKCGSVVYARKVF-------------------------------DEVPHRHIVA 144
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W +M+ Y++N + +EAI+ ++RM G+ D T V A + LG++ +
Sbjct: 145 WNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSV 204
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
G G ++NV VGSAL+DMY+K G + DA + + ++V ++++I+G++ HG +
Sbjct: 205 VLGVG-VSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGES 263
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHV----------GLKCYGVSPSTDHYACMVDLL 322
+Q+F +M K + N T VL C ++ GL S + ++ L
Sbjct: 264 LQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVTWTSVIVGL 323
Query: 323 GRAGCLEEALKMVEKM---PVEPNGGVWGALLGAC----------QIHR----------- 358
+ G E AL +M + PN ++L AC QIH
Sbjct: 324 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK 383
Query: 359 --------------NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+ EIA+ N L E++ + N +I S YA G + ++ +
Sbjct: 384 YVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSV-NSMIYS--YAQNGFGHEALQLFSGM 440
Query: 405 KMTGLKKNPGYSWL 418
K TGL+ N +WL
Sbjct: 441 KDTGLEPN-NVTWL 453
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 315/538 (58%), Gaps = 47/538 (8%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
++ GYI+ K ++ L+ + + G TL+ KAC ++ + G+QIHA I
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK-A 59
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF SDL+V + ++ MY+KCG DM +AG +F
Sbjct: 60 GFDSDLHVNSGILDMYIKCG-------------------------------DMVNAGIVF 88
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
N + D VAWT+M++G V N +A+ + RM+ + V D T +I A + + ++
Sbjct: 89 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 148
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ A +++ VG++L+DMY+KCG+I+DAYR+F M RN+ +++M++G
Sbjct: 149 QGRQLH--ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 206
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSP 310
A HG A A+ LF M +P+ V+FIG+L+ACSH GL YG+ P
Sbjct: 207 LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP 266
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
+HY+C+VD LGRAG ++EA K++E MP + + + ALLGAC+I + E + A L
Sbjct: 267 EIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARL 326
Query: 371 FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA 430
F LEP Y++LSNIYA+A WDDV+ R+++K +KK+PG+SW++ + ++H F
Sbjct: 327 FALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV-KNMLHLFVV 385
Query: 431 GDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGL 490
D +HP + I + +++ ++ DGY P+ VL DV DEEK+R L HSEKLA+A+GL
Sbjct: 386 DDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGL 445
Query: 491 LTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++T T+R++KNLR+C DCH + S+V REIV+RD RFHHF+DG CSCG+YW
Sbjct: 446 ISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF + + WT++I G + G+ ++ +Y MR+ + P +T + L KA + V
Sbjct: 86 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 145
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+HA I L SD +VG +++ MY KCG + + ++F +M R++ W ++
Sbjct: 146 ALEQGRQLHANVIKL-DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 204
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V A +G+ E EA+ F+ M+ G+E D V
Sbjct: 205 VGLAQHGNAE-------------------------------EAVNLFKSMKSHGIEPDRV 233
Query: 187 TLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +G++SAC+ G+ A ++ + G P + S L+D + G + +A ++
Sbjct: 234 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP--EIEHYSCLVDALGRAGLVQEADKVI 291
Query: 246 VGMKQRNVFSYSSMILG 262
M + S + +LG
Sbjct: 292 ETMPFKASASINRALLG 308
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 329/557 (59%), Gaps = 21/557 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F+++ ++ W +++ + + ++S+ +M +G+ P F + + +AC+ +
Sbjct: 60 LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+Q+HA+ +L F D V +++I MY KCG +R VFD + ++ VSWT +I
Sbjct: 120 YLRLGKQVHAR-FMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMI 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDY 185
YA +G A LF + P+++ +WTA+++G +Q+ + F M+ G++ D
Sbjct: 179 SGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDP 238
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ L V+ CA L +++ + + GF + + +AL+DMY+KC I A IF
Sbjct: 239 LVLSSVVGGCANLALLELGKQIHGLVIALGFESC--LFISNALVDMYAKCSDILAAKDIF 296
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +++V S++S+I+G A HG+A A+ L+ +MV + KPN VTF+G+L ACSH GL
Sbjct: 297 YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVS 356
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y ++PS HY C++DLL R+G L+EA +++K+P +P+ W +LL A
Sbjct: 357 RGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C H N E+ A+ + +L+P+ YI+LSN+YA A MW VS+VR+L+ ++K P
Sbjct: 417 CMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEP 476
Query: 414 GYSWLE--GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
GYS ++ D V H + D HP EI L DL ++ GY PN VLYD+ +
Sbjct: 477 GYSSIDFGKDSQVFHAGESCD--HPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQ 534
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK++ L HSE+LA+A+GLL PG +RI+KNLRIC DCH + S ++ REI+VRD
Sbjct: 535 EKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDA 594
Query: 532 MRFHHFQDGKCSCGNYW 548
R+HHF++GKCSC ++W
Sbjct: 595 TRYHHFKEGKCSCNDFW 611
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 65/268 (24%)
Query: 6 RLVFEQVKYKNPFLWTALIRGY-------------------------------ILQGHLK 34
R VF+ + +KN WT++I GY I GH
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219
Query: 35 DSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
S SL+ MRREGI V LS++ C + + LG+QIH I L GF S L++ N
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIAL-GFESCLFISNA 278
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY KC + ++ +F MP +DV+SWT +IV A +G E A L++E+ L
Sbjct: 279 LVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVL------ 332
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
KP E VT VG++ AC+ G++ + +
Sbjct: 333 --------SRIKPNE-----------------VTFVGLLYACSHAGLVSRGRELFR-SMT 366
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + ++ + L+D+ S+ G +D+A
Sbjct: 367 TDYSINPSLQHYTCLLDLLSRSGHLDEA 394
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ C S ++H+Q I+ GF + NT++ +Y KCG + P+
Sbjct: 10 LQLCARRQSASAAGELHSQ-IIKAGFDKSSLLSNTLLDVYGKCGLI----------PQ-- 56
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-Q 177
A LF+E+P +D V+W +++T + + PR + M
Sbjct: 57 -------------------ALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFT 97
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ G++ D+ ++ AC+ LG ++ V S F ++ VV S+LIDMY+KCG
Sbjct: 98 HDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFF--CDDEVVKSSLIDMYTKCGQ 155
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
DDA +F + +N S++SMI G+A GR A+ LF
Sbjct: 156 PDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLF 194
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 318/595 (53%), Gaps = 69/595 (11%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA-----CTEVLDVSLGQQI 74
+T+L+RGY+ G L D+I L+ M + L L A + D + +
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV 174
Query: 75 HAQTILLGGF-----------------TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
A T +L G+ ++ MI Y + G + +RK+F+ MPER
Sbjct: 175 VAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPL------------------------------ 147
+ VSWT ++V Y G +E A LFN +P
Sbjct: 235 NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMR 294
Query: 148 -KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D W+AM+ Y QN EA+ F M + GV +Y +++ +++ CA L V+ Y
Sbjct: 295 ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V F +V SALI MY KCG++D A R+F + +++ ++SMI G+A H
Sbjct: 355 VHAAMLRCSFD--MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQH 412
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDH 314
G A+ +F DM P+G+T+IG LTACS+ G G + P +H
Sbjct: 413 GLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEH 472
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y+CMVDLLGR+G +EEA +++ MPVEP+ +WGAL+GAC++HRN EIA++AA L ELE
Sbjct: 473 YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELE 532
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGD-L 433
P G Y++LS+IY S G W+D S++R+ + L K+PG SW+E D+ V H F +GD L
Sbjct: 533 PGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV-HLFTSGDVL 591
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
HP I + L L L GY + VL+D+ +E+K L HSE+ A+A+GLL
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +R+MKNLR+C DCH + +++ REIV+RD RFHHF+DG CSC +YW
Sbjct: 652 PEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 48/347 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE + + + AL+ GY ++ L+ M + + +S L +
Sbjct: 37 RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D A + F + +++ YV+ G L + ++F +MPER+ VS+T L
Sbjct: 97 PDA-------AAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + G + A LF+E+P +D VAWTAM++GY Q + EA F+ M V
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +IS AQ G + A + E+ P N V +A++ Y + G ++DA +F
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAMLVGYIQAGHVEDAAELF 259
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---------------------- 283
M + V + ++M++GF G AA +F M + +
Sbjct: 260 NAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALS 319
Query: 284 ---------TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDL 321
+PN + I +LT C+ + + YG C D+
Sbjct: 320 TFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 49/299 (16%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-- 149
N I + G + +R F+ MP R S+ L+ Y N ++A GLF +P +D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 150 -------------------------------KVAWTAMVTGYVQNAKPREAIEYFERMQY 178
V++T+++ GYV++ +AI F++M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMP- 139
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
E ++V+ ++ G + A + + P +VV +A++ Y + G I
Sbjct: 140 ---ERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYCQAGRI 190
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A +F M +RNV S+++MI G+A +G + A +LF M + +G + A
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA- 249
Query: 299 SHV--GLKCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
HV + + P AC M+ G+ G ++ A + EKM E + G W A++ A
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM-RERDDGTWSAMIKA 307
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 36/261 (13%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A G++E A F +PL+ ++ A++ GY +N P A+ F RM + + Y
Sbjct: 24 IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS-Y 82
Query: 186 VTLVGVIS--------ACAQLGVIKYANWVCEIAE-GSGF---------------GPINN 221
L+ +S A A L I + V G+ P N
Sbjct: 83 NALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERN 142
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + L+ G +++A R+F M R+V ++++M+ G+ GR A LF +M K
Sbjct: 143 HVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 282 TETKPNGVTFIGVLTACSHVG-----LKCYGVSPSTDHYACMVDLLG--RAGCLEEALKM 334
N V++ +++ + G K + V P + + L+G +AG +E+A ++
Sbjct: 203 R----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 335 VEKMPVEPNGGVWGALLGACQ 355
MP P ++G Q
Sbjct: 259 FNAMPEHPVAACNAMMVGFGQ 279
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 322/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A I GY G+ K+++ L+ M + + P T+ + AC +
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I GF +L + N +I +Y KCG
Sbjct: 251 IELGRQVHSW-INDHGFGXNLKIVNALIDLYSKCG------------------------- 284
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + + VT
Sbjct: 285 ------ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVT 338
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++SACA LG I W+ + G N + ++LIDMY+KCG I+ A ++F
Sbjct: 339 MLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R++ S+++MI GFAMHGRA+AA +F M K +P+ +TF+G+L+ACSH G+
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y + P +HY CM+DL G +G +EA KM+ M +EP+G +W +LL AC+
Sbjct: 459 RHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACK 518
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+ + A +L ++EP+ G+Y++LSNIYA+A W++V++ R LL G+KK PG
Sbjct: 519 MHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGC 578
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 579 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 536 HFQDGKCSCGNYW 548
HF+DG+CSC +YW
Sbjct: 698 HFRDGECSCNDYW 710
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 221/403 (54%), Gaps = 20/403 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ +W + RG+ L ++ LY M G+ P S+T L K+C +
Sbjct: 59 VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQ+H Q +L GF DLY+ ++I MYV+ G L ++KV D+ RDVVS+T LI
Sbjct: 119 FKEGQQLHGQ-VLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G +ESA +F+E+P+KD V+W A ++GY + +EA+E F++M V D T
Sbjct: 178 GYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDEST 237
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ G I+ V GFG N+ + +ALID+YSKCG ++ A +F G
Sbjct: 238 MVTVLSACAQSGSIELGRQVHSWINDHGFG--XNLKIVNALIDLYSKCGELETACGLFQG 295
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF DM+++ KPN VT + +L+AC+H+G
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ ++D+ + G +E A ++ + M + + W A++
Sbjct: 356 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGF 414
Query: 355 QIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWD 395
+H A + + + +EPD I ++ L + + +GM D
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDI-TFVGLLSACSHSGMLD 456
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/552 (38%), Positives = 318/552 (57%), Gaps = 46/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ WT LI GY G ++++L+ M G P FTLS+L KA
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+HA + L G+ +++VG++++ MY + W
Sbjct: 222 DHHGRQLHAFS-LKYGYDMNVHVGSSLLDMYAR---------------------WAH--- 256
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M A +FN L K+ V+W A++ G+ + + + F +M G E + T
Sbjct: 257 -------MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFT 309
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V +ACA G ++ WV SG PI +G+ LIDMY+K GSI DA ++F
Sbjct: 310 YSSVFTACASSGSLEQGKWVHAHVIKSGGQPI--AYIGNTLIDMYAKSGSIKDAKKVFRR 367
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++++ S++S+I G+A HG A+QLF M+K + +PN +TF+ VLTACSH GL
Sbjct: 368 LVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG 427
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
K + + H+ +VDLLGRAG L EA K +E+MP++P VWGALLG+C++
Sbjct: 428 QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRM 487
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+N ++ AA +FEL+P G +++LSNIYASAG D ++VR+++K +G+KK P S
Sbjct: 488 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 547
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E + V H F A D +HP EIQ+ + +++ GY P+ VL+ ++ ++++
Sbjct: 548 WVEIENEV-HVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELK 606
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEKLALAF +L T PG T+RI KN+RIC DCH AS+V+GREI+VRD RFHH
Sbjct: 607 LQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHH 666
Query: 537 FQDGKCSCGNYW 548
F G CSC +YW
Sbjct: 667 FLHGMCSCRDYW 678
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 167/372 (44%), Gaps = 49/372 (13%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
+ P S + CT + + G+ IHA I F DL + N ++ MY KCG
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCG---- 154
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+E A LF+++P KD V+WT +++GY Q+ +
Sbjct: 155 ---------------------------SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQA 187
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+ F +M + G + + TL ++ A + + + G+ NV VGS
Sbjct: 188 SEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD--MNVHVGS 245
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+L+DMY++ + +A IF + +NV S++++I G A G ++LF M++ +P
Sbjct: 246 SLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEP 305
Query: 287 NGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
T+ V TAC+ H + G P ++D+ ++G +++A K+
Sbjct: 306 THFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVF 365
Query: 336 EKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHL-FELEPDKIGNYIILSNIYASAGM 393
++ V+ + W +++ G Q E Q+ L +++P++I +L+ + +G+
Sbjct: 366 RRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC-SHSGL 423
Query: 394 WDDVSRVRRLLK 405
D+ L+K
Sbjct: 424 LDEGQYYFELMK 435
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 39/276 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+++F + KN W ALI G+ +G + + L+ M R+G P FT S++F AC
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 320
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +HA I GG Y+GNT+I MY K G + ++KVF + ++D+VSW +
Sbjct: 321 GSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSI 379
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G G EA++ FE+M A V+ +
Sbjct: 380 ISGYAQHG----LGA---------------------------EALQLFEQMLKAKVQPNE 408
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T + V++AC+ G++ + E+ + V ++D+ + G +++A +
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA--QVAHHVTVVDLLGRAGRLNEANKFI 466
Query: 246 VGMKQRNVFSYSSMILGFA-MHGR----AHAAIQLF 276
M + + +LG MH +AA Q+F
Sbjct: 467 EEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIF 502
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 309/541 (57%), Gaps = 54/541 (9%)
Query: 26 GYILQGHLKDSISLYCSMRREGIGPVSFTLSAL--FKACTEVLDVSLGQQIHAQTILLGG 83
GY+ + S+ L+ +M V +AL F A V D + +HA I G
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHA-LIAKIG 228
Query: 84 FTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGL 141
F + V NTM+ Y K G L +RKVFD M ERDV
Sbjct: 229 FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDV---------------------- 265
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--VETDYVTLVGVISACAQLG 199
V+W +M+ Y QN EAI + +M G ++ + V L V+ ACA G
Sbjct: 266 ---------VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAG 316
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I+ + G NV VG++++DMYSKCG ++ A R F +K++N+ S+S+M
Sbjct: 317 AIQTGKRIHNQVVRMGLE--ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAM 374
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I G+ MHGR A+++F +M ++ +PN +TFI VL ACSH GL + +G
Sbjct: 375 ITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFG 434
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ +HY CMVDLLGRAGCL+EA ++++M V+P+ +WGALL AC+IH+N E+A+++
Sbjct: 435 IEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSV 494
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
LFEL+ G Y++LSNIYA A MW DV R+R L+K ++K PGYS E +G I+
Sbjct: 495 KRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFE-LKGKIYL 553
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD +HP EI L LL+R+Q GY PN SVL+D+ +EEK+ L HSEKLA+A
Sbjct: 554 FYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVA 613
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
F L+ + P + + I+KNLR+C DCH M +++ REI++RD RFHHF+DG CSC +Y
Sbjct: 614 FALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDY 673
Query: 548 W 548
W
Sbjct: 674 W 674
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 36/246 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACT 63
R VF+ ++ ++ W ++I Y G ++I LY M G I + LSA+ AC
Sbjct: 255 RKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACA 313
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ G++IH Q + +G ++YVG +++ MY KCG + + + F ++ E++++SW+
Sbjct: 314 HAGAIQTGKRIHNQVVRMG-LEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWS 372
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I TGY + + +EA+E F M+ +G+
Sbjct: 373 AMI-------------------------------TGYGMHGRGQEALEIFTEMKRSGLRP 401
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+Y+T + V++AC+ G++ + A FG V ++D+ + G +D+AY
Sbjct: 402 NYITFISVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYS 460
Query: 244 IFVGMK 249
+ MK
Sbjct: 461 LIKEMK 466
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F ++K KN W+A+I GY + G ++++ ++ M+R G+ P T ++ AC+ +
Sbjct: 360 FRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLL 419
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELIV 127
G+ + G + + M+ + + G L + + EM + D W L+
Sbjct: 420 DEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLS 479
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
A + ++E A E+ +K A +GY
Sbjct: 480 ACRIHKNVELA-----EMSVKRLFELDASNSGY 507
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 318/556 (57%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF +++++ WTA+I G QG +I L+ M+ EG PV T S++ K CT
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSS 646
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+++ A IL G+ D VGN L
Sbjct: 647 ACLDEGKKVIA-YILNSGYELDTGVGNA-------------------------------L 674
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AY+ +G M A +F+++P +D V+W ++ GY QN + A+E+ +MQ V +
Sbjct: 675 ISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNK 734
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ V +++AC+ ++ V EI + G +V VG+ALI MY+KCGS +A +
Sbjct: 735 FSFVSLLNACSSFSALEEGKRVHAEIVKRKLQG---DVRVGAALISMYAKCGSQGEAQEV 791
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++NV ++++MI +A HG A A+ F M K KP+G TF +L+AC+H GL
Sbjct: 792 FDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLV 851
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YGV P+ +HY C+V LLGRA +EA ++ +MP P+ VW LLG
Sbjct: 852 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLG 911
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N +A+ AAN+ +L YI+LSN+YA+AG WDDV+++RR+++ G++K
Sbjct: 912 ACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 971
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E D +IHEF A D +HP + EI L L ++ GY P+ + VL+D+
Sbjct: 972 PGRSWIEVD-NIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAH 1030
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
++ L THSE+LA+A+GL+ T PG +RI KNLRIC DCH S+++GREI+ RD+
Sbjct: 1031 QETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSN 1090
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F++GKCSC +YW
Sbjct: 1091 RFHSFKNGKCSCEDYW 1106
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 167/360 (46%), Gaps = 46/360 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+ ++ ++ ALI GH ++ Y MR +G+ T ++ AC+
Sbjct: 284 KQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH+ I G +SD+ +GN +I MY +CG L +R++F MP+RD++SW +
Sbjct: 344 KALEAGKLIHSH-ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA D EA+ +++MQ GV+
Sbjct: 403 IAGYARREDRG-------------------------------EAMRLYKQMQSEGVKPGR 431
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + ++SACA + E SG +N + +AL++MY +CGS+ +A +F
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRSGIK--SNGHLANALMNMYRRCGSLMEAQNVF 489
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
G + R+V S++SMI G A HG A +LF +M E +P+ +TF VL+ C
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G+ + ++++ R G L++A + + + W A++G C
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 45/345 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ W A+I GY + +++ LY M+ EG+ P T L AC
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH + IL G S+ ++ N ++ MY +CG L ++ VF+ RDV+S
Sbjct: 445 SAYADGKMIH-EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS---- 499
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +M+ G+ Q+ A + F+ MQ +E D
Sbjct: 500 ---------------------------WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V+S C ++ + SG +V +G+ALI+MY +CGS+ DA +F
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQL--DVNLGNALINMYIRCGSLQDARNVF 590
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL-----TACSH 300
++ R+V S+++MI G A G AI+LF M +P TF +L +AC
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 301 VGLKCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
G K G T ++ ++G + +A ++ +KMP
Sbjct: 651 EGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 204/464 (43%), Gaps = 93/464 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W +LI Y QG K + L+ M+ G P T ++ AC +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH+Q I+ G+ D V N+++ MY KCG L +R+VF + RDVVS+ ++
Sbjct: 144 LENGKKIHSQ-IIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 128 AYANNGDMESAGGLFNELPLK----DKVAW------------------------------ 153
YA ++ GLF ++ + DKV +
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 154 -----TAMVT-----GYVQNAKP-------REAIEY----------------FE---RMQ 177
TA+VT G V +AK R+ + Y FE RM+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV + T + +++AC+ ++ + I+E G ++V +G+ALI MY++CG
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED---GHSSDVQIGNALISMYARCG 379
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ A +F M +R++ S++++I G+A A++L+ M KP VTF+ +L+
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439
Query: 297 ACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC+ H + G+ + ++++ R G L EA + E +
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVI 498
Query: 346 VWGALLGACQIHRNPEIA----QIAANHLFELEPDKIGNYIILS 385
W +++ H + E A Q N ELEPD I +LS
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNE--ELEPDNITFASVLS 540
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 34/244 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T AL + CT + ++IHAQ ++ D+++ N +I MYVKC + + +VF E
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQ-MVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP RDV+SW LI YA G ++A + F
Sbjct: 88 MPRRDVISWNSLISCYAQQG-------------------------------FKKKAFQLF 116
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E MQ AG + +T + +++AC ++ + +G+ + V ++L+ MY
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ--RDPRVQNSLLSMYG 174
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + A ++F G+ R+V SY++M+ +A + LFG M P+ VT+I
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 294 VLTA 297
+L A
Sbjct: 235 LLDA 238
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 23/248 (9%)
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
ET+ T V ++ C + ++ A + + GP ++ + + LI+MY KC S+ D
Sbjct: 23 TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGP--DIFLSNLLINMYVKCRSVLD 80
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-- 298
A+++F M +R+V S++S+I +A G A QLF +M PN +T+I +LTAC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 299 -----------SHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV- 346
S + Y P + ++ + G+ G L A ++ + P V
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF--AGISPRDVVS 196
Query: 347 WGALLG--ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+ +LG A + + + + PDK+ YI L + + + M D+ R+ +L
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKV-TYINLLDAFTTPSMLDEGKRIHKLT 255
Query: 405 KMTGLKKN 412
GL +
Sbjct: 256 VEEGLNSD 263
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 315/557 (56%), Gaps = 50/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+++ KN W+A+I + K+ SL+ M EG P + A+ A
Sbjct: 63 LSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMA 119
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V ++ + ++ G D V + GM+ +CG + +RK
Sbjct: 120 CVRSHEEADDVY-RVVVENGLDFDQSVQSAAAGMFARCGRVEVARK-------------- 164
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF+ + KD V W + YV+ P EA+ ++M G+
Sbjct: 165 -----------------LFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFP 207
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +TL+GVI AC+ L + A+ V I +GF + V +ALID+Y KCGS+ A +
Sbjct: 208 DAITLLGVIRACSTLASFQLAHIVHGIIT-TGFFYNQLLAVETALIDLYVKCGSLTYARK 266
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F GM++RN+ ++S+MI G+ MHG A+ LF D +K KP+ +TF+ +L+ACSH GL
Sbjct: 267 VFDGMQERNIITWSAMISGYGMHGWGREALNLF-DQMKASVKPDHITFVSILSACSHSGL 325
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +GV+P +HYACMVD+LGRAG L+EA +E+MPV PN VWGALL
Sbjct: 326 VAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH N ++A++ A LF+L+P G Y+IL NIY G + +R L+K G+KK
Sbjct: 386 GACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKK 445
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
GYS +E + ++ F AGD +HP + I L L+DR++ +GY P++ VL+DV +E
Sbjct: 446 IAGYSVIE-IKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEE 504
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA+ FGLL PG+ +RI KNLR+C DCH S+V GREIVVRD
Sbjct: 505 TKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDA 564
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 565 HRFHHFKNGACSCRDYW 581
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 157/356 (44%), Gaps = 51/356 (14%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R GI P +FT + KAC+ + G +IH Q ++ G+ S +++ N++I MY KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIH-QDVVKFGYQSQVFISNSLITMYGKCD 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
SR+VFDEMP+++ VSW +A++ +Q
Sbjct: 60 KYELSRQVFDEMPDKNAVSW-------------------------------SAIIGACLQ 88
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
+ + +E F +M G + +++A A + + A+ V + +G +
Sbjct: 89 DDRCKEGFSLFRQMLSEGSRP---SRGAILNAMACVRSHEEADDVYRVVVENGLD--FDQ 143
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V SA M+++CG ++ A ++F G+ +++ ++++ I + A+ L M+
Sbjct: 144 SVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQ 203
Query: 283 ETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHY-------ACMVDLLGRAGCLEE 330
P+ +T +GV+ ACS + +G+ + Y ++DL + G L
Sbjct: 204 GIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTY 263
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHR-NPEIAQIAANHLFELEPDKIGNYIILS 385
A K+ + M E N W A++ +H E + ++PD I ILS
Sbjct: 264 ARKVFDGMQ-ERNIITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSILS 318
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 312/549 (56%), Gaps = 51/549 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+A+I GY +GH +++ ++ M+ G+ P TL++L C V + G+Q HA I
Sbjct: 338 WSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVI 397
Query: 80 L------LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
DL V N +I MY KC +R +FD + +D
Sbjct: 398 KNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKD--------------- 442
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM--QYAGVETDYVTLVGV 191
K+ V WT M+ GY Q+ + +A++ F ++ Q ++ + TL
Sbjct: 443 --------------KNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+ ACA+LG ++ + A + + VG+ LIDMYSK G ID A +F MK R
Sbjct: 489 LMACARLGELRLGRQLHAYALRNE-NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR 547
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
NV S++S++ G+ MHGR A+ LF M K +G+TF+ VL ACSH G+
Sbjct: 548 NVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYF 607
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
K +G++P +HYACMVDLLGRAG L EA+++++ M +EP VW ALL A +IH N
Sbjct: 608 HDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHAN 667
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
E+ + AA+ L EL + G+Y +LSN+YA+A W DV+R+R L+K TG++K PG SW++
Sbjct: 668 IELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQ 727
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
G + F GD +HP S +I L DL+ R++ GY P L+DV DEEK +L
Sbjct: 728 GKKSTT-TFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFE 786
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+A+G+LTT+PG +RI KNLRIC DCH + S +I EIV+RD+ RFHHF+
Sbjct: 787 HSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKK 846
Query: 540 GKCSCGNYW 548
G CSC +YW
Sbjct: 847 GSCSCRSYW 855
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 38/403 (9%)
Query: 8 VFEQV---KYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE---GIGPVSFTLSALFKA 61
+F++V K ++ W +++ Y+ G + ++ + M + P + TL + A
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C V + G+Q+H ++ G D++VGN ++ MY KC + + KVF+ + ++DVVS
Sbjct: 244 CASVFALQHGKQVHGFSVR-NGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVS 302
Query: 122 WTELIVAYANNGDMESAGGLF---NELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
W ++ Y+ G +SA LF E +K D + W+A++ GY Q EA++ F +MQ
Sbjct: 303 WNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQ 362
Query: 178 YAGVETDYVTLVGVISACAQLGVIKY-----ANWVCEIAEGSGFGPINNVVVGSALIDMY 232
G+E + VTL ++S CA +G + Y A + I + ++++V + LIDMY
Sbjct: 363 LYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMY 422
Query: 233 SKCGSIDDAYRIFVGM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET--KPNG 288
+KC S A IF + K +NV +++ MI G+A HG A+ A++LF + K +T KPN
Sbjct: 423 AKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNA 482
Query: 289 VTFIGVLTACSHVG-------LKCYGVSPSTDHYA-----CMVDLLGRAGCLEEALKMVE 336
T L AC+ +G L Y + + C++D+ ++G ++ A + +
Sbjct: 483 FTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFD 542
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
M + N W +L+ +H E A HLF+ + K+G
Sbjct: 543 NMKLR-NVVSWTSLMTGYGMHGRGE----EALHLFD-QMQKLG 579
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 166/329 (50%), Gaps = 45/329 (13%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+ F W ALIR + G L D++ YC M+R G P +T + KAC E+ + G
Sbjct: 89 HSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGAS 148
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+HA + G S++++ N+++ MY +CG L + ++FDE+ ER +
Sbjct: 149 VHA-IVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI-------------- 193
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM--QYA-GVETDYVTLVG 190
+D V+W +++ YVQ + R A+ RM Y+ + D +TLV
Sbjct: 194 --------------EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVN 239
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++ ACA + +++ V + +G +++V VG+AL+ MY+KC +++A ++F G+K+
Sbjct: 240 ILPACASVFALQHGKQVHGFSVRNGL--VDDVFVGNALVSMYAKCSKMNEANKVFEGIKK 297
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------- 302
++V S+++M+ G++ G +A+ LF M + + K + +T+ V+ + G
Sbjct: 298 KDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDV 357
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCL 328
++ YG+ P+ A ++ G L
Sbjct: 358 FRQMQLYGLEPNVVTLASLLSGCASVGAL 386
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ +K +N WT+L+ GY + G ++++ L+ M++ G T + AC+
Sbjct: 538 RAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHS 597
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G + G T M+ + + G L + ++ M E V W
Sbjct: 598 GMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVA 657
Query: 125 LIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A +AN E A EL ++ ++T + Y + ++ M++ G+
Sbjct: 658 LLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGI 717
Query: 182 E 182
Sbjct: 718 R 718
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 318/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ +N W A++ +L G ++I Y +R G P + A F AC
Sbjct: 174 RHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGA 233
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +SLG+Q H ++ GF D+ V N+M+ Y KC G +R VFD M R+ VS
Sbjct: 234 MYLSLGEQFHG-FVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVS---- 288
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +MV Y QN EA + + +G E
Sbjct: 289 ---------------------------WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTD 321
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ CA L + + +A S N+ V SAL+DMY KCG ++DA +IF
Sbjct: 322 FMVSSALTTCAGLLGLHLGRALHAVAVRSCIDA--NIFVASALVDMYGKCGCVEDAEQIF 379
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVGL- 303
QRN+ ++++MI G+A G A A+ +F DM+++ ET PN +T + V+T+CS GL
Sbjct: 380 YETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLT 439
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ P T+HYAC+VDLLGRAG E+A ++++ MP+ P+ VWGALLG
Sbjct: 440 KDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLG 499
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H E+ +IAA LFEL+P GN+++LSN++ASAG W + + +R+ +K G+KK+
Sbjct: 500 ACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKD 559
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+ + V+H FRA D H EIQ L L ++QA GY P+ + LYD+ +EE
Sbjct: 560 PGCSWVTW-KNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEE 618
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSEKLALAFGL+ PG +RIMKNLRIC DCH S ++GREI+VRDN
Sbjct: 619 KESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNN 678
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ +CSCG+YW
Sbjct: 679 RFHHFKQYQCSCGDYW 694
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 163/387 (42%), Gaps = 55/387 (14%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVS-LGQQIHAQT 78
+TA I G G ++S + M R G+ P FT + FKA S +G QIH+
Sbjct: 85 YTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLA 144
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I G D +V + MY K G L +R +F EMP R+V
Sbjct: 145 IRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNV------------------- 185
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
VAW A++T V + +P E IE + ++ AG L V+SACA
Sbjct: 186 ------------VAWNAVMTNAVLDGRPLETIEAYFGLREAG------GLPNVVSACAFF 227
Query: 199 GVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A ++ + GF G +V V ++++D Y KC A +F GM RN
Sbjct: 228 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 287
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVG--LKCYG 307
S+ SM+ +A +G A + ++ +P LT C+ H+G L
Sbjct: 288 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 347
Query: 308 VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
V D + +VD+ G+ GC+E+A ++ + P + N W A++G + + A
Sbjct: 348 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP-QRNLVTWNAMIGGYAHIGDAQNA 406
Query: 364 QIAANHLFELEPDKIGNYIILSNIYAS 390
+ + + + NYI L N+ S
Sbjct: 407 LLVFDDMIR-SGETAPNYITLVNVITS 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 16/221 (7%)
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV-IKYA 204
P V++TA ++G Q+ +P A+ F M G+ + T A A
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
+ +A G+ P++ V +AL DMY K G + A +F M RNV ++++++
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAAL-DMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPST 312
+ GR I+ + + + PN V+ AC+ +KC G
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKC-GFEMDV 255
Query: 313 DHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
MVD G+ C +A + + M V N W +++ A
Sbjct: 256 SVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWCSMVAA 295
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
P + + + L+++YSK A V SY++ I G A HGR A+ F
Sbjct: 46 APALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAF 105
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYAC-MVDLLG 323
M++ +PN TF A + + +G P +C +D+
Sbjct: 106 AGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYF 165
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ G L+ A + +MP N W A++
Sbjct: 166 KTGRLKLARHLFGEMP-NRNVVAWNAVM 192
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 322/558 (57%), Gaps = 64/558 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ N F+W +IRGY ++++ LY M + ++T L KAC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + QQIHA I +G F S++Y N+++ +Y K
Sbjct: 129 SSMSALEETQQIHAHIIKMG-FGSEIYTTNSLLNVYSK---------------------- 165
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+GD++SA LF+++ +D EA+ F RMQ AG++
Sbjct: 166 ---------SGDIKSARLLFDQVDQRDT-----------------EALNLFHRMQTAGIK 199
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D V LV + ACA LGV+ W+ + + ++G LIDMY+KCG +++A
Sbjct: 200 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI--DPILGCVLIDMYAKCGDLEEAI 257
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+++ V +++MI G+A+HGR A++ F M +PN +TF G+LTACSH G
Sbjct: 258 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 317
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G PS +HY CMVDLLGRAG L+EA +++E MPV+PN +WGAL
Sbjct: 318 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 377
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC IH N E+ + L +++P G YI L++I+A+AG W+ +RVRR +K G+
Sbjct: 378 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 437
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG S + + G HEF AGD +HP EI L +++RL+ +GY+P L +L D+ D
Sbjct: 438 KLPGCSVISVN-GTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLED 496
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK+ + HSEKLA+ FGL++T PG T+RI+KNLR+CEDCH + S+V REI++RD
Sbjct: 497 KEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRD 556
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F+DG C+CG+YW
Sbjct: 557 RTRFHLFKDGNCTCGDYW 574
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 41/293 (13%)
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQT+ L S++ + G +K G + DE+P ++++ A N+G +
Sbjct: 19 AQTLHLLQRCSNMEELRQIHGQMLKTGL------ILDEIPASKLLAF----CASPNSGSL 68
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A +F+ + + W M+ GY + +P EA+ + M Y V + T ++ AC
Sbjct: 69 AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
+ + ++ + GFG + + ++L+++YSK G I A +F + QR+
Sbjct: 129 SSMSALEETQQIHAHIIKMGFG--SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-- 184
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LK 304
A+ LF M K + V + L AC+ +G +K
Sbjct: 185 ---------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIK 229
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ + ++D+ + G LEEA+++ KM E VW A++ IH
Sbjct: 230 KHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYAIH 281
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 317/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+Q+ N F WTA+I GY+ +G + ++++ L+ M + P FT S+ KAC
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + +G+Q+ + LG F+S V N++I MY
Sbjct: 389 LAALRIGEQVFTHAVKLG-FSSVNCVANSLISMY-------------------------- 421
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ++ A F+ L K+ +++ ++ Y +N EA+E F ++ G+
Sbjct: 422 -----ARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G I + SG N V +ALI MYS+CG+I+ A+++
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL--NQSVCNALISMYSRCGNIESAFQV 534
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++S+I GFA HG A A++LF M++ +PN VT+I VL+ACSHVGL
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLV 594
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+GV P +HYACMVD+LGR+G L EA++ + MP + + VW LG
Sbjct: 595 NEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLG 654
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EP YI+LSN+YAS WD+VS +R+ +K L K
Sbjct: 655 ACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKE 714
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H+F GD +HP + EI L +L +++ GY PNL VL+DV +E+
Sbjct: 715 AGCSWVEVENKV-HKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQ 773
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+++L HSEK+A+AFGL++TS +R+ KNLRIC DCH + S GREI+VRD
Sbjct: 774 KEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDAN 833
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH +DG+CSC YW
Sbjct: 834 RFHHIKDGRCSCNEYW 849
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 50/365 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ +N WT +I + G+ ++I L+ M G P FTLS + AC +
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMEL 286
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
+ LGQQ+H+Q I G T D VG +I MY KC G + +RK+FD++ + +V SWT
Sbjct: 287 LLLGQQLHSQAI-RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT- 344
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGVET 183
AM+TGYVQ EA++ F M V
Sbjct: 345 ------------------------------AMITGYVQKGGYDEEALDLFRGMILTHVIP 374
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ T + ACA L ++ V A GF +N V ++LI MY++ G IDDA +
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN--CVANSLISMYARSGRIDDARK 432
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + ++N+ SY+++I +A + + A++LF ++ + TF +L+ + +G
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 304 ---------KCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + C ++ + R G +E A ++ E M + N W +++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Query: 353 ACQIH 357
H
Sbjct: 552 GFAKH 556
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+A++ + ++ + M G P + +A +AC+ VS+G I +
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVV 195
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G SD+ VG +I M+VK GD+ SA
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVK------------------------------GRGDLVSAF 225
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F ++P ++ V WT M+T +Q EAI+ F M +G E D TL GVISACA +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDDAYRIFVGMKQRNVFSY 256
++ + A G + VG LI+MY+KC GS+ A +IF + NVFS+
Sbjct: 286 LLLLGQQLHSQAIRHGLTL--DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343
Query: 257 SSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++MI G+ G A+ LF M+ T PN TF L AC+++
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 35/296 (11%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+ NP T + I G L +IS M +G P T S K C +G
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+H + + D N++I +Y KCG W
Sbjct: 88 VH-EKLTQSDLQLDSVTLNSLISLYSKCG------------------QW----------- 117
Query: 134 DMESAGGLFNEL-PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
E A +F + +D ++W+AMV+ + N A+ F M G +
Sbjct: 118 --EKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAAT 175
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSIDDAYRIFVGMKQR 251
AC+ + + + +G+ ++V VG LIDM+ K G + A+++F M +R
Sbjct: 176 RACSTAEFVSVGDSIFGFVVKTGYLQ-SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER 234
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
N +++ MI G A AI LF +M+ + +P+ T GV++AC+++ L G
Sbjct: 235 NAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 320/558 (57%), Gaps = 51/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ KN WTA+I Y GH +++S++ M R P FT + + +C
Sbjct: 106 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRA 165
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++LG+QIH I+ + S ++VG++++ MY K G
Sbjct: 166 SGLALGKQIHG-LIVKWNYDSHIFVGSSLLDMYAKAG----------------------- 201
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+E A +F LP +D V+ TA++ GY Q EA+E F+R+Q G+ +Y
Sbjct: 202 --------QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNY 253
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +++A + L ++ + C + P V+ S LIDMYSKCG++ A R+
Sbjct: 254 VTYASLLTALSGLALLDHGKQAHCHVLRREL--PFYAVLQNS-LIDMYSKCGNLSYAQRL 310
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSH--- 300
F M +R S+++M++G++ HG ++LF M + KP+ VT + VL+ CSH
Sbjct: 311 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKM 370
Query: 301 --VGLKCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL Y G+ P T+HY C+VD+LGRAG ++EA + +++MP +P GV G+L
Sbjct: 371 EDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 430
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H + +I + + L E+EP+ GNY+ILSN+YASAG W+DV+ VR ++ +
Sbjct: 431 LGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVT 490
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW++ ++ +H F A D THP E+ + ++ +++ GY P++ VLYDV +
Sbjct: 491 KEPGRSWIQHEQ-TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDE 549
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+++L+ HSEKLAL FGL+TT G +R+ KNLRIC DCH F S+V RE+ +RD
Sbjct: 550 EQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRD 609
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH G CSCG+YW
Sbjct: 610 KNRFHQIVKGICSCGDYW 627
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+ Y KC ++DA ++ M ++NV S+++MI ++ G + A+ +F +M++++ K
Sbjct: 90 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGK 149
Query: 286 PNGVTFIGVLTACSH-----VGLKCYG--VSPSTDHY----ACMVDLLGRAGCLEEALKM 334
PN TF VLT+C +G + +G V + D + + ++D+ +AG +EEA ++
Sbjct: 150 PNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREI 209
Query: 335 VEKMP 339
E +P
Sbjct: 210 FECLP 214
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 309/555 (55%), Gaps = 40/555 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCS-MRREGIGPVSFTLSALFKACTEV 65
+F + FL+ LI ++ H + SLY + + P FT +LFKAC
Sbjct: 62 IFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQ 121
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + T D +V ++ Y KCG +G R +F+++ + D+ SW +
Sbjct: 122 PWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSI 181
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ AY +N +G + ++ L E + F MQ + ++ +
Sbjct: 182 LSAYVHN-----SGAICEDVSLS------------------LEVLTLFIEMQKSLIKANE 218
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTLV +ISACA+LG + W N VG+ALIDMYSKCG +D A ++F
Sbjct: 219 VTLVALISACAELGALSQGAWAHVYVLKHNLKL--NHFVGTALIDMYSKCGCLDLACQLF 276
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ R+ Y++MI GFA+HG H A+ LF M P+ VT + + +CSHVGL
Sbjct: 277 DQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVE 336
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YGV P +HY C+VDLLGRAG L EA + V MP++PN +W +LLGA
Sbjct: 337 EGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGA 396
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++H N EI ++ HL +LEP+ GNY++LSN+YAS WDDV RVR+L+K G+ K P
Sbjct: 397 ARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVP 456
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E G +HEF GD THP S EI L ++ RL G++P VL+D+ +EEK
Sbjct: 457 GSSLVEVG-GAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEK 515
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSE+LA+AF L+ + A +RI+KNLR+C DCH S++ REI+VRD R
Sbjct: 516 EDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNR 575
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSC +YW
Sbjct: 576 FHHFKEGACSCSDYW 590
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 297/490 (60%), Gaps = 26/490 (5%)
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKC--GFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
H Q + G F+ YV N ++ Y KC G L + K+FDEMP +D V+ +I AY
Sbjct: 1 HCQAVKPGIFSHG-YVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY--- 56
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
ESA +F +P KD VAW +++ G+ N KP EA+ ++RM GVE D T+V ++
Sbjct: 57 --FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLL 114
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QR 251
SACA+L + G N+ +AL+D+Y+KCG+I +A +IF M +R
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLN--KNLHANNALLDLYAKCGTISEARKIFDEMGIER 172
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
NV S++S+I+G A++G A++ F DM + P+ +TF+GVL ACSH G+
Sbjct: 173 NVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYF 232
Query: 304 ----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
+ Y + P +HY CMVDLLGRAG L+EA ++ MP++PN +W LLGAC IH +
Sbjct: 233 KRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH 292
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
+ A L +LEP G+Y++LSN+YAS W DV VRR + G++K PGYS +E
Sbjct: 293 LGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVE 352
Query: 420 -GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
G+ +HEF GD THP S I + L ++ +L+ GY P+ +VL D+ +EEK+ L
Sbjct: 353 LGNH--VHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALF 410
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEK+A+AF L+ T PG +RI+KNLR+C DCH + S+V R+IVVRD RFHHF+
Sbjct: 411 YHSEKIAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFR 470
Query: 539 DGKCSCGNYW 548
DG CSC +YW
Sbjct: 471 DGSCSCRDYW 480
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K+ W ++I G+ L G ++++LY M EG+ P FT+ +L AC E+
Sbjct: 63 VFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELAT 122
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
+ LG++ H + + G +L+ N ++ +Y KCG + +RK+FDEM ER+VVSWT LI
Sbjct: 123 LVLGRRAHVYMVKV-GLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLI 181
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V A NG F +EA+E+F+ M+ G+ +
Sbjct: 182 VGLAVNG--------FG-----------------------KEALEHFKDMEREGLVPSEI 210
Query: 187 TLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T VGV+ AC+ G++ + + E P + ++D+ + G + +AY
Sbjct: 211 TFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVP--RIEHYGCMVDLLGRAGLLKEAYDYI 268
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M Q N + +++ +HG +++ E K +G
Sbjct: 269 QDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSG 312
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 320/553 (57%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G K+++ L+ M + + P T + AC
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ + GF S+L + N +I +Y KCG
Sbjct: 212 IELGRQVHSW-VDDHGFDSNLKIVNALIDLYSKCG------------------------- 245
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 246 ------EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V+ ACA LG I W+ + G N + ++LIDMY+KCG I+ A+++F
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +++ S+++MI GFAMHGRA A+ LF M K +P+ +TF+G+L+ACSH G+
Sbjct: 360 MLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+A+ A +L ++EP+ +YI+LSNIYASAG W+DV+R+R LL +KK PG
Sbjct: 480 MHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGC 539
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+ EF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 540 SSIEVD-SVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 598
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REIV RD RFH
Sbjct: 599 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFH 658
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 659 HFRDGVCSCNDYW 671
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 220/407 (54%), Gaps = 28/407 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE ++ N +W +IRG+ L S++LY M G+ P S+T L K+C +
Sbjct: 20 VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQIH Q + LG F DLYV ++I MYV+ L + KVFD RDVVS+T LI
Sbjct: 80 FTEGQQIHGQVLKLG-FDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALIT 138
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ GD+ SA LF+E+P+KD V+W AM++GY + +EA+E FE M V D T
Sbjct: 139 GYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDEST 198
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V V+SACA G I+ V + GF +N+ + +ALID+YSKCG ++ A +F G
Sbjct: 199 YVTVLSACAHSGSIELGRQVHSWVDDHGFD--SNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ PN VT + VL AC+H+G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ ++D+ + G +E A ++ M + + W A++
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGF 375
Query: 355 QIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWD 395
+H + A+ LF +EPD I ++ L + + +GM D
Sbjct: 376 AMHGRAD----ASFDLFSRMRKIGIEPDDI-TFVGLLSACSHSGMLD 417
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 318/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ +N W A++ +L G ++I Y +R G P + A F AC
Sbjct: 67 RHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGA 126
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +SLG+Q H ++ GF D+ V N+M+ Y KC G +R VFD M R+ VS
Sbjct: 127 MYLSLGEQFHG-FVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVS---- 181
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +MV Y QN EA + + +G E
Sbjct: 182 ---------------------------WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTD 214
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ CA L + + +A S N+ V SAL+DMY KCG ++DA +IF
Sbjct: 215 FMVSSALTTCAGLLGLHLGRALHAVAVRSCIDA--NIFVASALVDMYGKCGCVEDAEQIF 272
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVGL- 303
QRN+ ++++MI G+A G A A+ +F DM+++ ET PN +T + V+T+CS GL
Sbjct: 273 YETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLT 332
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ P T+HYAC+VDLLGRAG E+A ++++ MP+ P+ VWGALLG
Sbjct: 333 KDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLG 392
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H E+ +IAA LFEL+P GN+++LSN++ASAG W + + +R+ +K G+KK+
Sbjct: 393 ACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKD 452
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+ + V+H FRA D H EIQ L L ++QA GY P+ + LYD+ +EE
Sbjct: 453 PGCSWVTW-KNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEE 511
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSEKLALAFGL+ PG +RIMKNLRIC DCH S ++GREI+VRDN
Sbjct: 512 KESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNN 571
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ +CSCG+YW
Sbjct: 572 RFHHFKQYQCSCGDYW 587
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 153/364 (42%), Gaps = 55/364 (15%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVS-LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC 101
M R G+ P FT + FKA S +G QIH+ I G D +V + MY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 102 GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
G L +R +F EMP R+V VAW A++T V
Sbjct: 61 GRLKLARHLFGEMPNRNV-------------------------------VAWNAVMTNAV 89
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF----G 217
+ +P E IE + ++ AG L V+SACA A ++ + GF G
Sbjct: 90 LDGRPLETIEAYFGLREAG------GLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCG 143
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
+V V ++++D Y KC A +F GM RN S+ SM+ +A +G A +
Sbjct: 144 FEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYL 203
Query: 278 DMVKTETKPNGVTFIGVLTACS-----HVG--LKCYGVSPSTDH----YACMVDLLGRAG 326
++ +P LT C+ H+G L V D + +VD+ G+ G
Sbjct: 204 GARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCG 263
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSN 386
C+E+A ++ + P + N W A++G + + A + + + + NYI L N
Sbjct: 264 CVEDAEQIFYETP-QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIR-SGETAPNYITLVN 321
Query: 387 IYAS 390
+ S
Sbjct: 322 VITS 325
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 322/557 (57%), Gaps = 54/557 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+++ N WTALI GY+ G +++ L C M E I P T S+L KAC
Sbjct: 307 RKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACAN 366
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+QIHA+ ++ + VGN ++ MY + G + +RK FD++ ER+++S
Sbjct: 367 LSDQDSGRQIHAR-VMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLS--- 422
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ D+ G + +W++ + E M GV T
Sbjct: 423 ------TSSDIGETG--------RSNASWSSQI----------------ESMD-VGVST- 450
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++SA A +G+ + ++ +GF ++ + ++L+ MYS+CG +DDA R
Sbjct: 451 -FTFASLLSAAATVGLPTKGQQLHALSIKTGFE--SDKGISNSLVSMYSRCGYLDDACRA 507
Query: 245 FVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F M+ NV S++S+I A HG A A+ LF DM+ + KPN VT+I VL+ACSHVGL
Sbjct: 508 FDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGL 567
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K + + P +HYACMVDLL R+G ++EAL+ + +MP + + VW LL
Sbjct: 568 VKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLL 627
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+ + N EI +IAA H+ +LEP Y++LSN+YA G+WD+V+R+R L++ L K
Sbjct: 628 GACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSK 687
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+ IHEFRAGD +HP + EI L L+ ++ GY P+ VL+D+SD+
Sbjct: 688 ETGLSWMHVG-NTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDK 746
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K++ L+ HSEK+A+AFGL+TT P +RI KNLR+C DCH + S+ GREI++RD+
Sbjct: 747 LKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDS 806
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH +DGKCSCG YW
Sbjct: 807 NRFHRMKDGKCSCGEYW 823
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 54/373 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF + + +WT +I Y+ G ++ L+ M +G P +T+S++ AC E
Sbjct: 203 RKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQ 262
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF---LGCSRKVFDEMPERDVVSW 122
LGQQ+H+ + LG SD V ++ MY K + C+RKVF M
Sbjct: 263 GSAGLGQQLHSLVLRLG-LVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM-------- 313
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ-NAKPREAIEYFERMQYAGV 181
P + ++WTA+++GYVQ + A+E M +
Sbjct: 314 -----------------------PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESI 350
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E +++T ++ ACA L + + G +N VVG+AL+ MY++ G +++A
Sbjct: 351 EPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVN--VVGNALVSMYAESGCMEEA 408
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+ F + +RN+ S SS I GR++A+ + + + TF +L+A + V
Sbjct: 409 RKAFDQLYERNLLSTSSDI---GETGRSNASWS--SQIESMDVGVSTFTFASLLSAAATV 463
Query: 302 GL-----KCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL + + +S T + +V + R G L++A + ++M + N W ++
Sbjct: 464 GLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSI 523
Query: 351 LGACQIHRNPEIA 363
+ A H + E A
Sbjct: 524 ISALAKHGHAERA 536
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 52/351 (14%)
Query: 6 RLVFEQVK-YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+ ++ ++ WTA+ G ++++ L M G+ P +FTL A AC
Sbjct: 99 RRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-- 156
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLY--VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
F +L+ G T++G +K GF G DV
Sbjct: 157 -------------------FPGELFRSSGGTVLGFAIKTGFWGT-----------DVSVG 186
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LI +A NGD+ +A +FN L + V WT M+T YVQ +A+E F M G E
Sbjct: 187 CALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFE 246
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSID 239
D T+ ++SACA+ G + + G +++ V L+DMY+K S++
Sbjct: 247 PDGYTMSSMVSACAEQGSAGLGQQLHSLV--LRLGLVSDTCVSCGLVDMYTKLQMEQSME 304
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAM-HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M NV S++++I G+ G+ + A++L +M+ +PN +T+ +L AC
Sbjct: 305 CARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKAC 364
Query: 299 SHVGLKCYG-------VSPSTDHY----ACMVDLLGRAGCLEEALKMVEKM 338
+++ + G + S + +V + +GC+EEA K +++
Sbjct: 365 ANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
LG+ +H + + +D V N+++ MY KCG + +R+VFD M
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMR-------------- 106
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
L+D V+WTAM +N +EA+ M +G+ + TL
Sbjct: 107 ----------------GLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLC 150
Query: 190 GVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
AC + + + V A +GF +V VG ALIDM+++ G + A ++F G+
Sbjct: 151 AAAHACFPGELFRSSGGTVLGFAIKTGFWG-TDVSVGCALIDMFARNGDLVAARKVFNGL 209
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+R V ++ MI + G A A++LF M++ +P+G T +++AC+ G
Sbjct: 210 VERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQG 263
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 321/568 (56%), Gaps = 57/568 (10%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYIL-----QGHLKDSISLYCSMRREGIGPVSFTLS 56
+ P L F ++ FLW LIR ++ G IS++ MR G+ P T
Sbjct: 10 STHPTLHFSHPTLES-FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFP 68
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
L ++ + LG+ +HAQ IL G D +V ++I MY
Sbjct: 69 FLLQSFASPSLLHLGRSVHAQ-ILRFGLAIDPFVQTSLISMY------------------ 109
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+++G ++ A LF +P ++ ++W+ M+ GYV+ + +EA+ F M
Sbjct: 110 -------------SSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM 156
Query: 177 QYAGV---ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
Q GV + T+ GV++AC +LG +++ W + G P++ VV+G+ALIDMY+
Sbjct: 157 QMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM-PVD-VVLGTALIDMYA 214
Query: 234 KCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
KCGS++ A +F + ++V ++S+MI G AMHG A + LF M+ +PN VTF+
Sbjct: 215 KCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFL 274
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
V AC H GL + Y + P+ HY CMVDL GRAG ++EA +V+ MP+
Sbjct: 275 AVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPM 334
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ VWGALL ++H + E ++A L ELEP G Y++LSN+YA G W+DV V
Sbjct: 335 EPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHV 394
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R L++ G+KK PG S +E GV+HEF GD +HP + +I L ++L+RL+ +GY N
Sbjct: 395 RDLMETMGIKKVPGCSLIEVG-GVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGN 453
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ VL D+ +E K+ L HSEKLALA+G L TSPG +RI+KNLRIC DCH+ + S+
Sbjct: 454 TKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISK 513
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V REI+VRD RFHHF G CSC +YW
Sbjct: 514 VFDREIIVRDCNRFHHFTQGLCSCRDYW 541
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 317/561 (56%), Gaps = 54/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV--SFTLSALFKACT 63
R F+++ NP + TA+ G + + ++S++ SM G V A
Sbjct: 144 RRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASA 203
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF--LGCSRKVFDEMPERDVVS 121
V D + IHA +G V NT+I Y K G LG +RK+FD M +RDV
Sbjct: 204 RVPDRGITGGIHALVSKIG-LDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDV-- 259
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG- 180
V+W M+ Y QN EA+ + +M G
Sbjct: 260 -----------------------------VSWNTMIALYAQNGLSTEALGLYSKMLIVGG 290
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V + VTL V+ ACA G I+ + G +NV VG++++DMYSKCG ++
Sbjct: 291 DVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLE--DNVYVGTSVVDMYSKCGKVE 348
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A++ F +K +N+ S+S+MI G+ MHG A+ +F DM K+ KPN +TFI VL ACS
Sbjct: 349 MAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACS 408
Query: 300 HVGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL +G+ P +HY CMVDLLGRAGCL+EA ++++M V+P+ +W
Sbjct: 409 HAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALW 468
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+I++N E+A+I A LFEL+ G Y++LSNIYA AGMW +V R+R L+K
Sbjct: 469 GALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTR 528
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G++K PGYS +E +G H F GD +HP EI L LL+R+ GY PN SVL+D
Sbjct: 529 GIEKPPGYSSVE-LKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHD 587
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EE++ +L HSEKLA+AF L+ + G+ + ++KNLR+C DCH + +++ GREI+
Sbjct: 588 LDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREII 647
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFHHF+DG CSCG+YW
Sbjct: 648 IRDLKRFHHFKDGLCSCGDYW 668
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 54/305 (17%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+H + G F SD Y + ++ MY C +R+ FDE+P + V T +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAM----- 161
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMV----TGYVQNAKPREAIEYFERMQYAGVETDYV 186
++G + N L + +MV G V A A+ R+ G+
Sbjct: 162 ------ASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIH 215
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID-DAYRIF 245
LV I Q G V + +ID Y+K G D A R
Sbjct: 216 ALVSKIGLDGQTG------------------------VANTIIDAYAKGGGHDLGAARKL 251
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM--VKTETKPNGVTFIGVLTACSHVG- 302
M R+V S+++MI +A +G + A+ L+ M V + + N VT VL AC+H G
Sbjct: 252 FDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGA 311
Query: 303 ----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ G+ + +VD+ + G +E A K +K+ + N W A++
Sbjct: 312 IQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGK-NILSWSAMIA 370
Query: 353 ACQIH 357
+H
Sbjct: 371 GYGMH 375
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/559 (39%), Positives = 319/559 (57%), Gaps = 53/559 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---- 63
VF++ + + ++W AL R + GH K+ + LY M G FT + + KAC
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V + G++IHA IL G+ ++++V T++ +Y K G + + VF MP ++ VSW+
Sbjct: 195 SVCPLRKGKEIHAH-ILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWS 253
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I +A NE+P+K A+E F+ M + +
Sbjct: 254 AMIACFAK-----------NEMPMK--------------------ALELFQLMMFEACNS 282
Query: 184 --DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT+V ++ ACA L ++ + I + V +ALI MY +CG +
Sbjct: 283 VPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSI--LPVLNALITMYGRCGEVLMG 340
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F MK+R+V S++S+I + MHG AIQ+F +M+ P+ ++FI VL ACSH
Sbjct: 341 QRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHA 400
Query: 302 G------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G L Y + P +HYACMVDLLGRA L EA+K++E M EP VWG+
Sbjct: 401 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGS 460
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLG+C+IH N E+A+ A+ LFELEP GNY++L++IYA A +W + V +LL+ GL
Sbjct: 461 LLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGL 520
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K PG SW+E R V + F + D +P EI L L + ++A GY P VLYD+
Sbjct: 521 QKLPGCSWIEVKRKV-YSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLD 579
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+RI++ HSEKLA+AFGL+ T+ G T+RI KNLR+CEDCH S+ REI+VR
Sbjct: 580 EEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVR 639
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DG CSCG+YW
Sbjct: 640 DVNRFHHFRDGVCSCGDYW 658
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 54/288 (18%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
LI+ G+LK ++ L C P T L +C + +S G +H + ++
Sbjct: 53 LIQSLCKGGNLKQALHLLCCEP----NPTQQTFEHLIYSCAQKNSLSYGLDVH-RCLVDS 107
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF D ++ +I MY + G + + KVFDE ER + W L A A G
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVG--------- 158
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC--AQLGV 200
+E ++ + +M + G +D T V+ AC ++L
Sbjct: 159 ----------------------HGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS- 195
Query: 201 IKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
VC + +G G N+ V + L+D+Y+K GS+ A +F M +N
Sbjct: 196 ------VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF 249
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS 299
S+S+MI FA + A++LF M+ + PN VT + +L AC+
Sbjct: 250 VSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACA 297
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/595 (36%), Positives = 317/595 (53%), Gaps = 69/595 (11%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA-----CTEVLDVSLGQQI 74
+T+L+RGY+ G L D+I L+ M + L L A + D + +
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV 174
Query: 75 HAQTILLGGF-----------------TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
A T +L G+ ++ MI Y + G + +RK+F+ MPER
Sbjct: 175 VAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPL------------------------------ 147
+ VSWT ++V Y G +E A LFN +P
Sbjct: 235 NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMC 294
Query: 148 -KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D W+AM+ Y QN EA+ F M + GV +Y +++ +++ CA L V+ Y
Sbjct: 295 ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V F +V SALI MY KCG++D A R+F + +++ ++SMI G+A H
Sbjct: 355 VHAAMLRCSFD--MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQH 412
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDH 314
G A+ +F DM P+G+T+IG LTACS+ G G + P +H
Sbjct: 413 GLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEH 472
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y+CMVDLLGR+G +EEA +++ MPVEP+ +WGAL+GAC++HRN EIA+ AA L ELE
Sbjct: 473 YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELE 532
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGD-L 433
P G Y++LS+IY S G W+D S++R+ + L K+PG SW+E D+ V H F +GD L
Sbjct: 533 PGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV-HLFTSGDVL 591
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
HP I + L L L GY + VL+D+ +E+K L HSE+ A+A+GLL
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +R+MKNLR+C DCH + +++ REI++RD RFHHF+DG CSC +YW
Sbjct: 652 PEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 48/347 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE + + + AL+ GY ++ L+ M + + +S L +
Sbjct: 37 RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D A + F + +++ YV+ G L + ++F +MPER+ VS+T L
Sbjct: 97 PDA-------AAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + G + A LF+E+P +D VAWTAM++GY Q + EA F+ M V
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +IS AQ G + A + E+ P N V +A++ Y + G ++DA +F
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAMLVGYIQAGHVEDAAELF 259
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---------------------- 283
M + V + ++M++GF G AA +F M + +
Sbjct: 260 NAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALS 319
Query: 284 ---------TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDL 321
+PN + I +LT C+ + + YG C D+
Sbjct: 320 TFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 49/299 (16%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-- 149
N I + G + +R F+ MP R S+ L+ Y N ++A GLF +P +D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 150 -------------------------------KVAWTAMVTGYVQNAKPREAIEYFERMQY 178
V++T+++ GYV++ +AI F++M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMP- 139
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
E ++V+ ++ G + A + + P +VV +A++ Y + G I
Sbjct: 140 ---ERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYCQAGRI 190
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A +F M +RNV S+++MI G+A +G + A +LF M + +G + A
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA- 249
Query: 299 SHV--GLKCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
HV + + P AC M+ G+ G ++ A + EKM E + G W A++ A
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGTWSAMIKA 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 36/261 (13%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A G++E A F +PL+ ++ A++ GY +N P A+ F RM + + Y
Sbjct: 24 IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS-Y 82
Query: 186 VTLVGVIS--------ACAQLGVIKYANWVCEIAE-GSGF---------------GPINN 221
L+ +S A A L I + V G+ P N
Sbjct: 83 NALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERN 142
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + L+ G +++A R+F M R+V ++++M+ G+ GR A LF +M K
Sbjct: 143 HVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 282 TETKPNGVTFIGVLTACSHVG-----LKCYGVSPSTDHYACMVDLLG--RAGCLEEALKM 334
N V++ +++ + G K + V P + + L+G +AG +E+A ++
Sbjct: 203 R----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 335 VEKMPVEPNGGVWGALLGACQ 355
MP P ++G Q
Sbjct: 259 FNAMPEHPVAACNAMMVGFGQ 279
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 322/558 (57%), Gaps = 54/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ ++ WT +I GY +++ L+ M R G P +TL+ + +C+
Sbjct: 97 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 156
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H+ ++ F S ++VG++++ MY K
Sbjct: 157 QSIYQGKQVHS-LLVKTNFESHMFVGSSLLDMYAK------------------------- 190
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +++ A +F+ LP +D V+ TA+++GY Q EA++ F ++ G++ ++
Sbjct: 191 ------SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNH 244
Query: 186 VTLVGVISACAQLGVIKYANWVCEI---AEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VT +++A + L + Y V + E F + N +LIDMYSKCG + +
Sbjct: 245 VTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN-----SLIDMYSKCGKLLYSR 299
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M +R+V S+++M++G+ HG H I LF D+ K E KP+ VT + VL+ CSH G
Sbjct: 300 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGG 358
Query: 303 LKCYGVSP------------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G+ T HY C++DLLGR+G LE+AL ++E MP E +WG+L
Sbjct: 359 LVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSL 418
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H N + ++ A L E+EP+ GNY+ILSNIYA+AGMW DV +VR+L+ +
Sbjct: 419 LGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 478
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+ D+ VIH F + + HP+ +I + ++ ++A G+ P+L VL+DV D
Sbjct: 479 KEPGQSWIILDK-VIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDD 537
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+R+L+ HSEKLA+ FGL+ T PG T+R+MKNLRIC DCH F S+V REI +RD
Sbjct: 538 EQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRD 597
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH G C+CG+YW
Sbjct: 598 KNRFHLLTHGNCTCGDYW 615
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 47/376 (12%)
Query: 22 ALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILL 81
A RG LQ + M G A AC E + G+Q+HA+ I
Sbjct: 12 AAARGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMIT- 70
Query: 82 GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGL 141
+ +++G ++ MYV+CG L + A +
Sbjct: 71 ARYRPAVFLGTRLVTMYVRCGAL-------------------------------DDARNV 99
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI 201
+ +P + V+WT M++GY Q + EA++ F +M AG + TL V+++C+ I
Sbjct: 100 LDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSI 159
Query: 202 KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
V + + F +++ VGS+L+DMY+K +I +A R+F + +R+V S +++I
Sbjct: 160 YQGKQVHSLLVKTNFE--SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIIS 217
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-------VSPSTDH 314
G+A G A+ LF + + N VTF ++TA S + YG +
Sbjct: 218 GYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPF 277
Query: 315 YAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANH 369
+ ++D+ + G L + ++ + M +E + W A+L H E+ + +
Sbjct: 278 FVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHGLGHEVISLFKDL 336
Query: 370 LFELEPDKIGNYIILS 385
E++PD + +LS
Sbjct: 337 HKEVKPDSVTLLAVLS 352
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 326/559 (58%), Gaps = 23/559 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R + + +N WT LI GY G +++ + SM +GI P T+ + AC ++
Sbjct: 191 RRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQL 250
Query: 66 LDVSLGQQIHAQTILLGG---FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVS 121
D++ G +H +L+G SD V +I MY KCG G +R+VFD + R
Sbjct: 251 KDLNFGCSLH---MLVGDKRMLMSDKLV-VALIDMYAKCGDTGRAREVFDALGRGRGPQP 306
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I Y G ++ A LF+++ D + + +++TGY+ + REA+ F +M+ G+
Sbjct: 307 WNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGL 366
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T+VG+++A A LG + + E +V +G+AL+DMY KCG +++A
Sbjct: 367 GADNFTMVGLLTASASLGALPQGRALHACIEQRLVE--RDVYLGTALLDMYMKCGRVEEA 424
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
F M R+V ++S+MI G A +G AA++ F M N VT+I VLTACSH
Sbjct: 425 MVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHS 484
Query: 302 GLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L + + P +HY CM+DLLGR+G L+EA+ +V+ MP++PN +W +
Sbjct: 485 CLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWAS 544
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+L AC++H+N ++AQ AA+HL +LEP + Y+ + NIY + W+D S++RRL++ G+
Sbjct: 545 ILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGV 604
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS + G +H+F GD +HP EI + ++ RL++ GY P + DV
Sbjct: 605 KKTAGYSSI-AVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVD 663
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK++ L+ HSEKLA+AFGL++ +P V I+KNLR+CEDCH + S++ REI+VR
Sbjct: 664 EEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVR 723
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+ G CSC ++W
Sbjct: 724 DRSRFHHFRGGVCSCNDFW 742
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 175/384 (45%), Gaps = 50/384 (13%)
Query: 37 ISLYCSMRREGIGPVSFTLSALFKACTEV-LDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
I LY M + P +FT LFK C V LG+ +HA ++ + + +I
Sbjct: 88 IILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPII 147
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
MY + G G +R+ FDE +DVV+WT +I A G ++ A L P+++ V WT
Sbjct: 148 HMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTG 207
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
+++GY + + EA++ F M G+ D VT++G++SAC QL + + + +
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKR 267
Query: 216 FGPINNVVVGSALIDMYSKCGS--------------------------------IDDAYR 243
+ +VV ALIDMY+KCG +D A
Sbjct: 268 MLMSDKLVV--ALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARS 325
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M+ +V +++S+I G+ GR A+ LF M + + T +G+LTA + +G
Sbjct: 326 LFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGA 385
Query: 304 KCYGVS---------PSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G + D Y ++D+ + G +EEA+ ++M V + W A++G
Sbjct: 386 LPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIG 444
Query: 353 ACQIHRNPEIAQIAANHLFELEPD 376
+ + + A H F ++ D
Sbjct: 445 GLAFN---GMGKAALEHFFWMKCD 465
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 31/206 (15%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ A LF+ +P + TA+ + ++ P I + RM V D T +
Sbjct: 53 LRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKC 112
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY---------------------- 232
CA+ G + A P ++ S +I MY
Sbjct: 113 CARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVV 172
Query: 233 ---------SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+K G +DDA R+ RNV +++ +I G++ GRA A+ F M+
Sbjct: 173 AWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDG 232
Query: 284 TKPNGVTFIGVLTACSHVGLKCYGVS 309
P+ VT IG+L+AC + +G S
Sbjct: 233 IAPDEVTVIGMLSACGQLKDLNFGCS 258
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 317/555 (57%), Gaps = 48/555 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W ++I+ Y L +I L+ MR I P TL +L +++ +
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGE 363
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + + T+ G F D+ +GN ++ MY K G +
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV----------------------- 400
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--VETDY 185
+SA +FN LP KD ++W +++GY QN EAIE + M+ G + +
Sbjct: 401 --------DSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQ 452
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V V+ AC+Q G ++ + +G +V VG++L DMY KCG +DDA +F
Sbjct: 453 GTWVSVLPACSQAGALRQGMKLHGRLLKNGL--YLDVFVGTSLADMYGKCGRLDDALSLF 510
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ + N ++++I HG A+ LF +M+ KP+ +TF+ +L+ACSH GL
Sbjct: 511 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 570
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG++PS HY CMVDL GRAG LE AL ++ MP++P+ +WGALL A
Sbjct: 571 EGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N ++ +IA+ HLFE+EP+ +G +++LSN+YASAG W+ V +R + GL+K P
Sbjct: 631 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTP 690
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+S +E D V F G+ THP E+ + L L ++L+ GY P+ R VL DV D+EK
Sbjct: 691 GWSSMEVDNKV-EVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEK 749
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ ILM+HSE+LA+AF L+TT T+RI KNLR+C DCH S++ REI+VRD+ R
Sbjct: 750 EHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNR 809
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 810 FHHFKNGVCSCGDYW 824
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 199/409 (48%), Gaps = 60/409 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+++ ++ W A+I GY G+ K++++L +R S T+ +L ACTE
Sbjct: 205 RILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMD----SVTVVSLLSACTEA 260
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D + G IH+ +I G S+L+V N +I +Y + G L +KV
Sbjct: 261 GDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGSLKDCQKV--------------- 304
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ + ++D ++W +++ Y N +P AI F+ M+ + ++ D
Sbjct: 305 ----------------FDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDC 348
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGP---INNVVVGSALIDMYSKCGSIDDAY 242
+TL+ + S +QLG I+ C +G + ++ +G+A++ MY+K G +D A
Sbjct: 349 LTLISLASILSQLGEIR----ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNGVTFIGVLTACSH 300
+F + ++V S++++I G+A +G A AI+++ M + E N T++ VL ACS
Sbjct: 405 AVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQ 464
Query: 301 V-----GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G+K +G Y + D+ G+ G L++AL + ++P N W
Sbjct: 465 AGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNT 523
Query: 350 LLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDD 396
L+ H + E A + + + ++PD I ++ L + + +G+ D+
Sbjct: 524 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHI-TFVTLLSACSHSGLVDE 571
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 42/301 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYC-SMRREGIGPVSFTLSALFKA 61
+ R F+ + ++ + W +I GY G+ + I + M G+ P T ++ KA
Sbjct: 103 ALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA 162
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C V D G +IH + G F D+YV ++I +Y + G + +R +FDEMP RD+ S
Sbjct: 163 CRNVTD---GNKIHCLALKFG-FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS 218
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I +GY Q+ +EA+ + ++
Sbjct: 219 WNAMI-------------------------------SGYCQSGNAKEALTLSDGLR---- 243
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT+V ++SAC + G + V + G + + V + LID+Y++ GS+ D
Sbjct: 244 AMDSVTVVSLLSACTEAG--DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M R++ S++S+I + ++ + AI LF +M + +P+ +T I + + S +
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 302 G 302
G
Sbjct: 362 G 362
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 25/283 (8%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER-MQYAGVE 182
+L+ Y G++ A F+ + +D AW M++GY + E I F M +G++
Sbjct: 91 KLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQ 150
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
DY T V+ AC + N + +A GF + +V V ++LI +Y + G++ +A
Sbjct: 151 PDYRTFPSVLKACRN---VTDGNKIHCLALKFGF--MWDVYVAASLIHLYCRYGAVVNAR 205
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M R++ S+++MI G+ G A A+ L + ++ VT + +L+AC+ G
Sbjct: 206 ILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDS----VTVVSLLSACTEAG 261
Query: 303 LKCYGV---SPSTDH--------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
GV S S H ++DL G L++ K+ ++M V + W +++
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR-DLISWNSII 320
Query: 352 GACQIHRNP--EIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
A +++ P I L ++PD + I L++I + G
Sbjct: 321 KAYELNEQPLRAILLFQEMRLSRIQPDCL-TLISLASILSQLG 362
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 322/558 (57%), Gaps = 54/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ ++ WT +I GY +++ L+ M R G P +TL+ + +C+
Sbjct: 65 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H+ ++ F S ++VG++++ MY K
Sbjct: 125 QSIYQGKQVHS-LLVKTNFESHMFVGSSLLDMYAK------------------------- 158
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ +++ A +F+ LP +D V+ TA+++GY Q EA++ F ++ G++ ++
Sbjct: 159 ------SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNH 212
Query: 186 VTLVGVISACAQLGVIKYANWVCEI---AEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VT +++A + L + Y V + E F + N +LIDMYSKCG + +
Sbjct: 213 VTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN-----SLIDMYSKCGKLLYSR 267
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M +R+V S+++M++G+ HG H I LF D+ K E KP+ VT + VL+ CSH G
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGG 326
Query: 303 LKCYGVSP------------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G+ T HY C++DLLGR+G LE+AL ++E MP E +WG+L
Sbjct: 327 LVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSL 386
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H N + ++ A L E+EP+ GNY+ILSNIYA+AGMW DV +VR+L+ +
Sbjct: 387 LGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 446
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+ D+ VIH F + + HP+ +I + ++ ++A G+ P+L VL+DV D
Sbjct: 447 KEPGQSWIILDK-VIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDD 505
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+R+L+ HSEKLA+ FGL+ T PG T+R+MKNLRIC DCH F S+V REI +RD
Sbjct: 506 EQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRD 565
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH G C+CG+YW
Sbjct: 566 KNRFHLLTHGNCTCGDYW 583
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 156/341 (45%), Gaps = 47/341 (13%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
A AC E + G+Q+HA+ I + +++G ++ MYV+CG L
Sbjct: 15 AAITACIERRALWEGRQVHARMIT-ARYRPAVFLGTRLVTMYVRCGAL------------ 61
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+ A + + +P + V+WT M++GY Q + EA++ F +M
Sbjct: 62 -------------------DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKM 102
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
AG + TL V+++C+ I V + + F +++ VGS+L+DMY+K
Sbjct: 103 LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE--SHMFVGSSLLDMYAKSE 160
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+I +A R+F + +R+V S +++I G+A G A+ LF + + N VTF ++T
Sbjct: 161 NIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVT 220
Query: 297 ACSHVGLKCYG-------VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGG 345
A S + YG + + ++D+ + G L + ++ + M +E +
Sbjct: 221 ALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM-LERSVV 279
Query: 346 VWGALLGACQIH-RNPEIAQIAANHLFELEPDKIGNYIILS 385
W A+L H E+ + + E++PD + +LS
Sbjct: 280 SWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDSVTLLAVLS 320
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/628 (34%), Positives = 338/628 (53%), Gaps = 85/628 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+F R VF+ + F W A+IRGY H +D++ +Y +M+ + P SFT L KAC
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 63 T-------------EVLDVSLGQQIHAQTILLGGFTSDLYVGNT---------------- 93
+ +V + + Q L+ + +G+
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 94 ---MIGMYVKCGFLGCSRKVFDEMPERDVV-SWTELI----------------------- 126
++ Y + G + ++F +M + DV W L+
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 127 ---------------VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
YA G + +A LF+++ + + W AM++GY +N REAI+
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F M V D +++ ISACAQ+G ++ A + E S + ++V + SALIDM
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDM 367
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
++KCGS++ A +F R+V +S+MI+G+ +HGRA AI L+ M + PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 292 IGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+G+L AC+H G+ G ++P HYAC++DLLGRAG L++A ++++ MPV
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
+P VWGALL AC+ HR+ E+ + AA LF ++P G+Y+ LSN+YA+A +WD V+ V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R +K GL K+ G SW+E RG + FR GD +HP EI++ + + RL+ G+ N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEV-RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ L+D++DEE + L +HSE++A+A+GL++T G +RI KNLR C +CH S+
Sbjct: 607 KDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISK 666
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ REIVVRD RFHHF+DG CSCG+YW
Sbjct: 667 LVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+LI A ++ GD+ A +F++LP W A++ GY +N ++A+ + MQ A V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T ++ AC+ L ++ +V GF +V V + LI +Y+KC + A
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA--DVFVQNGLIALYAKCRRLGSAR 174
Query: 243 RIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
+F G + +R + S+++++ +A +G A+++F M K + KP+ V + VL A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
H + G+ D + + + G + A + +KM PN +W A
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 350 LLG 352
++
Sbjct: 294 MIS 296
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/595 (36%), Positives = 317/595 (53%), Gaps = 69/595 (11%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA-----CTEVLDVSLGQQI 74
+T+L+RGY+ G L D+I L+ M + L L A + D + +
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV 174
Query: 75 HAQTILLGGF-----------------TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
A T +L G+ ++ MI Y + G + +RK+F+ MPER
Sbjct: 175 VAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPL------------------------------ 147
+ VSWT ++V Y G +E A LFN +P
Sbjct: 235 NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMC 294
Query: 148 -KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D W+AM+ Y QN EA+ F M + GV +Y +++ +++ CA L V+ Y
Sbjct: 295 ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V F +V SALI MY KCG++D A R+F + +++ ++SMI G+A H
Sbjct: 355 VHAAMLRCSFD--MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQH 412
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDH 314
G A+ +F DM P+G+T+IG LTACS+ G G + P +H
Sbjct: 413 GLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEH 472
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y+CMVDLLGR+G +EEA +++ MPVEP+ +WGAL+GAC++HRN EIA+ AA L ELE
Sbjct: 473 YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELE 532
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGD-L 433
P G Y++LS+IY S G W+D S++R+ + L K+PG SW+E D+ V H F +GD L
Sbjct: 533 PGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV-HLFTSGDVL 591
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
HP I + L L L GY + VL+D+ +E+K L HSE+ A+A+GLL
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +R+MKNLR+C DCH + +++ REI++RD RFHHF+DG CSC +YW
Sbjct: 652 PEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 48/347 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE + + + AL+ GY ++ L+ M + + +S L +
Sbjct: 37 RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D A + F + +++ YV+ G L + ++F +MPER+ VS+T L
Sbjct: 97 PDA-------AAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVL 149
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + G + A LF+E+P +D VAWTAM++GY Q + EA F+ M V
Sbjct: 150 LGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNV---- 205
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ +IS AQ G + A + E+ P N V +A++ Y + G ++DA +F
Sbjct: 206 VSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAMLVGYIQAGHVEDAAELF 259
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---------------------- 283
M + V + ++M++GF G AA +F M + +
Sbjct: 260 NAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALS 319
Query: 284 ---------TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDL 321
+PN + I +LT C+ + + YG C D+
Sbjct: 320 TFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 49/301 (16%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-- 149
N I + G + +R F+ MP R S+ L+ Y N ++A GLF +P +D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 150 -------------------------------KVAWTAMVTGYVQNAKPREAIEYFERMQY 178
V++T+++ GYV++ +AI F++M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMP- 139
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
E ++V+ ++ G + A + + P +VV +A++ Y + G I
Sbjct: 140 ---ERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYCQAGRI 190
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A +F M +RNV S+++MI G+A +G + A +LF M + +G + A
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA- 249
Query: 299 SHV--GLKCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
HV + + P AC M+ G+ G ++ A + EKM E + G W A++ A
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGTWSAMIKAY 308
Query: 355 Q 355
+
Sbjct: 309 E 309
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 306/554 (55%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT LI GY +++ L M R P FT ++ KA
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+Q+HA + D+YVG+ ++ MY +C + + +VFD W
Sbjct: 177 GGRGIGEQMHALAVKYN-LDEDVYVGSALLDMYARCQQMDMAIRVFD---------W--- 223
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
L K++V+W A++ G+ + + F MQ G +
Sbjct: 224 -------------------LDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATH 264
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V SA A++G ++ WV A G V + ++ MY+K GS+ DA ++F
Sbjct: 265 FTYSSVFSALARIGALEQGRWVH--AHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVF 322
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ QR++ ++++M+ FA +G A+ F ++ K + N +TF+ VLTACSH GL
Sbjct: 323 DRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVK 382
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y V P DHY VDLLGRAG L+EAL V KMP+EP VWGALLGAC
Sbjct: 383 EGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 442
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N +I Q AA+H+FEL+P+ G ++L NIYAS G WDD +RVR+++K TG+KK P
Sbjct: 443 RMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPA 502
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP S EI + ++ R++ GY PN VL + ++E++
Sbjct: 503 CSWVEIENSV-HMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERE 561
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF L+ GAT+RIMKN+RIC DCH S+V REIVVRD RF
Sbjct: 562 TKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRF 621
Query: 535 HHFQDGKCSCGNYW 548
HHF +G CSCG+YW
Sbjct: 622 HHFSNGSCSCGDYW 635
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 34/255 (13%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P ++ AC + +++ + IH+ + D ++ N++I MY KCG + +
Sbjct: 58 LAPTPRVYHSIITACAQSKNLAGARAIHSH-LSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
R VFD +P RDVVSWT LI TGY QN P
Sbjct: 117 RHVFDGIPTRDVVSWTYLI-------------------------------TGYAQNDMPA 145
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EA+ M A T + A G + +A + +V VGSA
Sbjct: 146 EALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALA--VKYNLDEDVYVGSA 203
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+DMY++C +D A R+F + +N S++++I GFA G + F +M +
Sbjct: 204 LLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGAT 263
Query: 288 GVTFIGVLTACSHVG 302
T+ V +A + +G
Sbjct: 264 HFTYSSVFSALARIG 278
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
+I+ACAQ + A + S + + ++LI MY KCG++ DA +F G+
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLA--GDGFLLNSLIHMYCKCGAVSDARHVFDGIPT 125
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--- 307
R+V S++ +I G+A + A+ L DM++ +P+G TF L A G + G
Sbjct: 126 RDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQM 185
Query: 308 ------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ D Y + ++D+ R ++ A+++ + + + N W AL+
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK-NEVSWNALIA 237
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 322/555 (58%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + K+ W +I G G ++++ + M + P SFTLS++ E
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+S G++IH +I G +D+YV +++I MY KC + S +VF + ERD +S
Sbjct: 253 VDISRGKEIHGCSIR-QGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS---- 307
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +++ G VQN E + +F +M A ++
Sbjct: 308 ---------------------------WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ ACA L + + +GF N+ + S+L+DMY+KCG+I A +IF
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFD--ENIFIASSLVDMYAKCGNIRTAKQIF 398
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+ R++ S+++MI+G A+HG+A AI+LF M KPN V F+ VLTACSH GL
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVD 458
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G++P +HYA + DLLGRAG LEEA + M + P G +W LL A
Sbjct: 459 EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 518
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N ++A+ AN + E++P+ G YI+L+NIY++A W + ++ R ++ G++K P
Sbjct: 519 CRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTP 578
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + ++ F AGD +HP +I++A+ L++ ++ +GY P+ V +DV +E+K
Sbjct: 579 ACSWIEV-KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQK 637
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
K ++ +HSE+LA+ FG++ T G T+R+ KNLR+C DCH S+++GREIVVRDN R
Sbjct: 638 KYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSR 697
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 698 FHHFKNGTCSCGDYW 712
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 32/370 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + + W ++IR Y G S+ + M G+ P ++ K+C ++D
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL---GCSR----KVFDEMPERDVV 120
++LG+ +H I + G DLY GN ++ MY K FL G R +VFDEM ER
Sbjct: 122 LNLGESLHGYIIRV-GLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T +++ +S +F +P KD V+W ++ G +N E + M A
Sbjct: 181 VRTVSVLSE------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 181 VETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
++ D TL V+ A+ I + C I +G ++ V S+LIDMY+KC +
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD----ADIYVASSLIDMYAKCTRV 290
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D+ R+F + +R+ S++S+I G +G ++ F M+ + KP +F ++ AC
Sbjct: 291 ADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPAC 350
Query: 299 SHVG-------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+H+ L Y D + +VD+ + G + A ++ ++M + + W
Sbjct: 351 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSW 409
Query: 348 GALLGACQIH 357
A++ C +H
Sbjct: 410 TAMIMGCALH 419
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 312/557 (56%), Gaps = 50/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ ++ + + ALI GY + G + S++L+ + G+ P S TL AL +
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L Q +H +L GFT++ V + ++ +
Sbjct: 327 GHDLLAQCLHG-FVLKSGFTANSPVSTAITTLHCRLN----------------------- 362
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DMESA F+ +P K +W AM++GY QN A+ FE+M V +
Sbjct: 363 --------DMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNP 414
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+ +SACAQLG + W+ I P NV V +ALIDMY+KCGSI +A RIF
Sbjct: 415 ITISSTLSACAQLGALSLGKWLHRIITEEDLEP--NVYVMTALIDMYAKCGSISEARRIF 472
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +NV S+++MI G+ +HG+ A++L+ DM+ P TF+ VL ACSH GL
Sbjct: 473 NTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVE 532
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-GVWGALLG 352
Y ++P +H CMVDLLGRAG L+EA +++ + P G GVWGALLG
Sbjct: 533 EGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLG 592
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC +H++ ++A++A+ LFEL+P+ G Y++LSN++ S + + + VR+ K L K
Sbjct: 593 ACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKT 652
Query: 413 PGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGY+ +E G++ H F AGD HP S I L L ++ GY+P + LYDV +E
Sbjct: 653 PGYTLIEIGNKP--HVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEE 710
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ ++ HSEKLA+AFGLL+T PG +RI+KNLR+C DCH S+V R IVVRD
Sbjct: 711 EKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDA 770
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 771 SRFHHFRDGVCSCGDYW 787
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 162/364 (44%), Gaps = 51/364 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R VF+ V + LW L+ G L G +++ + M +G + P + TL+++ A E
Sbjct: 169 RKVFDTVPSPDTVLWNTLLAG--LSG--SEAVESFARMVCDGSVRPDATTLASVLPAAAE 224
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V DV++G+ +H+ KCG + E + V T
Sbjct: 225 VADVTMGRCVHS--------------------FAEKCG-----------LAEHEHV-LTG 252
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI Y+ GD+ESA LF+ + D VA+ A+++GY N ++ F + G+ +
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TLV +I + G A + SGF N V +A+ ++ + ++ A +
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGF--TANSPVSTAITTLHCRLNDMESARKA 370
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M ++ + S+++MI G+A +G A+ LF MVK +PN +T L+AC+ +G
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430
Query: 305 CYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + P+ ++D+ + G + EA ++ M N W A++
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD-NKNVVSWNAMIAG 489
Query: 354 CQIH 357
+H
Sbjct: 490 YGLH 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 50/278 (17%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D +V + + +Y + +RKVFD +P D V W L+ + +
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS-------------- 193
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVGVISACAQLGVIKYAN 205
EA+E F RM G V D TL V+ A A++ +
Sbjct: 194 ---------------------EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGR 232
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
V AE G +V+ G LI +YSKCG ++ A +F M++ ++ +Y+++I G+++
Sbjct: 233 CVHSFAEKCGLAEHEHVLTG--LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSV 290
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIG-----------VLTACSHVGLKCYGVSPSTDH 314
+G +++ LF +++ PN T + +L C H + G + ++
Sbjct: 291 NGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPV 350
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ L R +E A K + MP E W A++
Sbjct: 351 STAITTLHCRLNDMESARKAFDTMP-EKTMESWNAMIS 387
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 319/542 (58%), Gaps = 18/542 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ A+I GY+ G ++++ + M GI FT ++ +AC + LG+Q+HA +
Sbjct: 254 YNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVL 313
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
F+ + N+++ +Y KCG +R +F++MP +D+VSW L+ Y ++G + A
Sbjct: 314 RREDFS--FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F E+ K+ ++W M++G +N E ++ F M+ G E G I +CA LG
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
Y N A+ G +++ G+ALI MY+KCG +++A ++F M + S++++
Sbjct: 432 A--YCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNAL 489
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I HG A+ ++ +M+K +P+ +TF+ VLTACSH GL Y
Sbjct: 490 IAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYR 549
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P DHYA ++DLL R+G EA ++E +P +P +W ALL C++H N E+ IAA
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ LF L P+ G Y++LSN+YA+ G W++V+RVR+L++ G+KK SW+E + V H
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV-HT 668
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV-SDEEKKRILMTHSEKLAL 486
F D +HP + + + L DL ++ GY P+ VL+DV SD K+ +L THSEK+A+
Sbjct: 669 FLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAV 728
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL+ PG T+RI KNLR C DCH F S+V+ R+I++RD RFHHF++G+CSCGN
Sbjct: 729 AFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGN 788
Query: 547 YW 548
+W
Sbjct: 789 FW 790
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 195/443 (44%), Gaps = 54/443 (12%)
Query: 3 SFPRLVFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+ R VFE+ V ++ ++ A+I G+ +I+L+C M+ EG P FT +++
Sbjct: 97 ALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLA 156
Query: 61 ACTEVLDVSLG-QQIHAQTILLG-GFTSDLYVGNTMIGMYVKCG----FLGCSRKVFDEM 114
V+D Q HA + G G+ + V N ++ +Y +C L +RKVFD++
Sbjct: 157 GLALVVDDEKQCVQFHAAALKSGAGYVTS--VSNALVSVYSRCASSPSLLHSARKVFDDI 214
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK-VAWTAMVTGYVQNAKPREAIEYF 173
PE+D SWT ++ Y NG + L + K VA+ AM++GYV +EA+E
Sbjct: 215 PEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMV 274
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFG--------------- 217
RM +G+E D T VI ACA +++ V + F
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCG 334
Query: 218 ------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
P ++V +AL+ Y G I +A IF MK++N+ S+ MI G A
Sbjct: 335 KFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC-----------YGVSPSTDH 314
+G ++LF M + +P F G + +C+ +G C G S
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSA 454
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-- 372
++ + + G +EEA ++ MP + W AL+ A H + A + +
Sbjct: 455 GNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQHGHGVEAVDVYEEMLKKG 513
Query: 373 LEPDKIGNYIILSNIYASAGMWD 395
+ PD+I +L+ + AG+ D
Sbjct: 514 IRPDRITFLTVLTAC-SHAGLVD 535
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 52/284 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F+++K KN W +I G G ++ + L+ M+REG P + S K+C +
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
GQQ HAQ + + GF S L GN +I MY KCG + +++VF MP D VSW L
Sbjct: 431 GAYCNGQQFHAQLVKI-GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNAL 489
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G G+ EA++ +E M G+ D
Sbjct: 490 IAALGQHGH-----GV--------------------------EAVDVYEEMLKKGIRPDR 518
Query: 186 VTLVGVISACAQLGVI----KYAN---WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+T + V++AC+ G++ KY N V I G+ + LID+ + G
Sbjct: 519 ITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH--------YARLIDLLCRSGKF 570
Query: 239 DDAYRIFVGMKQRNVFS-YSSMILGFAMHGRAH----AAIQLFG 277
+A I + + + +++ G +HG AA +LFG
Sbjct: 571 SEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 59/336 (17%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L + +H I G F ++ N +I +Y K L +R++FDE+ E D ++ T ++
Sbjct: 30 LQLARAVHGNIITFG-FQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 128 AYANNGDMESAGGLFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
Y +GD+ A +F E P ++D V + AM+TG+ N AI F +M++ G + D
Sbjct: 89 GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148
Query: 186 VTLVGVISACAQLGVIKYANWVC----EIAEGSGFGPINNVVVGSALIDMYSKCGS---- 237
T V+ A L ++ C A SG G + + V +AL+ +YS+C S
Sbjct: 149 FTYASVL---AGLALVVDDEKQCVQFHAAALKSGAGYVTS--VSNALVSVYSRCASSPSL 203
Query: 238 IDDAYRIFVGMKQRN--------------------------------VFSYSSMILGFAM 265
+ A ++F + +++ + +Y++MI G+
Sbjct: 204 LHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVN 263
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYA---- 316
G A+++ MV + + + T+ V+ AC++ +G + + + ++
Sbjct: 264 CGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD 323
Query: 317 -CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+V L + G EA + EKMP + + W ALL
Sbjct: 324 NSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALL 358
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/564 (35%), Positives = 321/564 (56%), Gaps = 28/564 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKD-------SISLYCSMRREGIGPVSFTLSAL 58
R VFE++ ++ W +LI GY G+ + SI L+ M + P T++++
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSI 228
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+AC + D+ G+ +H ++ G+ D N +I MY KCG L S++VF M +D
Sbjct: 229 LQACGHLGDLEFGKYVH-DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 287
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VSW +I Y NG M + +F + +D + W ++ V + + RM+
Sbjct: 288 SVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 347
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCG 236
GV D T++ ++ C+ L + + G F G ++V VG+ LI+MYSKCG
Sbjct: 348 EGVTPDMATMLSILPVCSLLAAKRQGKEI----HGCIFKLGLESDVPVGNVLIEMYSKCG 403
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S+ +++++F MK ++V +++++I M+G A++ FG+M P+ V F+ ++
Sbjct: 404 SLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIF 463
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL K Y + P +HYAC+VDLL R+ L++A + MP++P+
Sbjct: 464 ACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS 523
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+WGALL AC++ + EIA+ + + EL PD G Y+++SNIYA+ G WD V +R+ +
Sbjct: 524 SIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSI 583
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K GLKK+PG SW+E V + F G E+ + LG L + +GY NL+ V
Sbjct: 584 KARGLKKDPGCSWMEIQNKV-YVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFV 642
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+D+ ++EK+ IL HSE+LA+AFGLL T PG +++MKNLR+CEDCH S+++ R
Sbjct: 643 LHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQR 702
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
E++VRD RFH F+DG CSCG+YW
Sbjct: 703 ELLVRDANRFHVFKDGACSCGDYW 726
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 147/285 (51%), Gaps = 32/285 (11%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N +LW ++IR G +++SLY +R + P ++T ++ AC +LD + + IH
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ +L GF SDLY+GN +I MY + L +RKVF+EMP RDVVSW LI Y NG
Sbjct: 139 DR-VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-- 195
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
W + Y Q +I+ F M + D +T+ ++ AC
Sbjct: 196 ----------------YWNEALEIYYQ------SIKLFMEM-VNQFKPDLLTITSILQAC 232
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
LG +++ +V + SG+ + + LI+MY+KCG++ + +F GMK ++ S
Sbjct: 233 GHLGDLEFGKYVHDYMITSGYEC--DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS 290
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++SMI + +G+ ++++F +M + +T+ ++ +C H
Sbjct: 291 WNSMINVYIQNGKMGDSLKVFENMKARDI----ITWNTIIASCVH 331
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 119 VVSWTELIVAYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ +LI YA+ D S+ +F P + W +++ N EA+ + Q
Sbjct: 48 VIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQ 107
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++ D T VI+ACA L + A + + GFG +++ +G+ALIDMY +
Sbjct: 108 RIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG--SDLYIGNALIDMYCRFND 165
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA-------IQLFGDMVKTETKPNGVT 290
+D A ++F M R+V S++S+I G+ +G + A I+LF +MV + KP+ +T
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV-NQFKPDLLT 224
Query: 291 FIGVLTACSHVG 302
+L AC H+G
Sbjct: 225 ITSILQACGHLG 236
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIF-VGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G ++V+ + LI Y+ ++ +F + NV+ ++S+I +G A+
Sbjct: 42 LGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALS 101
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPS-----------TDHYA--CMVDL 321
L+ + + +P+ TF V+ AC+ GL + ++ S +D Y ++D+
Sbjct: 102 LYSETQRIRLQPDTYTFPSVINACA--GLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDM 159
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
R L++A K+ E+MP+ + W +L+
Sbjct: 160 YCRFNDLDKARKVFEEMPLR-DVVSWNSLIS 189
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 325/555 (58%), Gaps = 36/555 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTEV 65
+F Q+ K+ W +I G + G + ++ L M G ++F+++ + + V
Sbjct: 476 LFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSV 535
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L LG+QIH Q +L G D +V N++I MY KCG + + +F +P+ + +E
Sbjct: 536 L--GLGKQIHTQ-VLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSE- 591
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ +ES V+W++MV+GYVQN + +A++ F M + VE D
Sbjct: 592 --ESCDDAVVES-------------VSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDK 636
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL V+SACA GV++ V + G G +V +GS++IDMY KCGS++DA+ IF
Sbjct: 637 FTLTSVVSACASAGVLELGRQVHGYIQKIGHGL--DVFLGSSIIDMYVKCGSLNDAWLIF 694
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
K RNV ++SMI G A+HG+ A++LF M+ PN V+F+GVLTACSH GL
Sbjct: 695 NQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLE 754
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ YG+ P +H+ CMVDL GRAG L E + + + VW + L +
Sbjct: 755 EGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSS 814
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N E+ L ELEP G YI+ S+I A+ W++ +++R L++ G+KKNP
Sbjct: 815 CRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNP 874
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW++ + +H F GD +HP T+I L +L+ RL+ GY ++ V+ DV E++
Sbjct: 875 SQSWIQ-LKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQR 933
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+A+G+++T+PG +R+MKNLR+C DCH F+ AS+++GREI++RD R
Sbjct: 934 QVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHR 993
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 994 FHHFKHGHCSCADYW 1008
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 210/431 (48%), Gaps = 42/431 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
+FE++ + F WT LI G+ G D + L+ M+ +G+ P FTLS + K+C+ V
Sbjct: 343 MFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVN 402
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D +G+ IH IL G D + N+++ YVKC G + K+F M E+D VSW ++
Sbjct: 403 DSRIGKGIHGW-ILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMM 461
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+Y GDM+ + LF +LP KD +W M+ G ++N R A+E +M AG + +
Sbjct: 462 SSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKL 521
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T + + L V+ + + G +++ V ++LIDMY KCG ++ A IF
Sbjct: 522 TFSIALVLASSLSVLGLGKQIH--TQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFK 579
Query: 247 GMKQRNVF---------------SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
+ Q + S+SSM+ G+ +GR A++ F M+ ++ + + T
Sbjct: 580 HLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTL 639
Query: 292 IGVLTACSHVGL-----KCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPV 340
V++AC+ G+ + +G H + ++D+ + G L +A ++
Sbjct: 640 TSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAK 698
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFEL------EPDKIGNYIILSNIYASAGMW 394
+ N +W +++ C +H A LFEL P+++ +++ + + AG+
Sbjct: 699 DRNVVLWTSMISGCALHGQGR----EAVRLFELMINEGITPNEV-SFVGVLTACSHAGLL 753
Query: 395 DDVSRVRRLLK 405
++ + RL++
Sbjct: 754 EEGCKYFRLMR 764
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 47/225 (20%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ YA + ++E A +F E+P D +WT +++G+ + + + F +MQ GV
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKC 235
+ TL V+ +C ++ V + G G G + V+ ++++D Y KC
Sbjct: 385 PNQFTLSIVLKSC--------SSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKC 436
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
A ++F M +++ S++ M+ + G ++ LF +
Sbjct: 437 RCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL---------------- 480
Query: 296 TACSHVGLKCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM 338
P D + M+D L R GC AL+++ KM
Sbjct: 481 --------------PGKDAASWNTMIDGLMRNGCERVALELLYKM 511
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
+ G+ L+++Y+K +++ A+++F + Q +VFS++ +I GFA G + + LF M
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 283 ETKPNGVTFIGVLTACS 299
PN T VL +CS
Sbjct: 382 GVCPNQFTLSIVLKSCS 398
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
L+F Q K +N LWT++I G L G ++++ L+ M EGI P + + AC+
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSH 749
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 308/546 (56%), Gaps = 47/546 (8%)
Query: 16 NPFLWTALIRGYILQGHLKD-SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+ FL+ LIR Y GH KD +++LY M + I P FT + KAC + ++LGQ +
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + G F D++V NTM+ MY C G
Sbjct: 155 HGSVVKFG-FDCDIHVQNTMVHMYSCCA------------------------------GG 183
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ SA +F+E+P D V W+AM+ GY + + EA+ F MQ A V D +T+V ++SA
Sbjct: 184 INSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSA 243
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C LG ++ W+ E V V +ALIDM++KCG I A ++F M ++ +
Sbjct: 244 CTDLGALELGKWIEAYIERHEIH--KPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIV 301
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++S+I+G AMHGR A LF +M + P+ V FIG+L+ACSH GL
Sbjct: 302 SWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSM 361
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
K Y + P +HY CMVD+ R G ++EAL+ V MP+EPN + L+ AC+ H ++
Sbjct: 362 MKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKL 421
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ L + EP NY++LSNIYA W+ +++R ++++ G+KK PG + +E D
Sbjct: 422 GEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDN 481
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
I+EF AGD +H EI + + ++ ++ GY+P+ VL D+++E+K+ L HSE
Sbjct: 482 E-IYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+AFGLL T PG +RI+KNLR+C DCH S++ REI++RD RFHHF+ G+C
Sbjct: 541 KLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
Query: 543 SCGNYW 548
SCG++W
Sbjct: 601 SCGDFW 606
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W+A+I GY G ++++L+ M+ + P T+ ++ ACT++
Sbjct: 188 RKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDL 247
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ I A I + V N +I M+ KCG + + K+F M E+ +VSWT +
Sbjct: 248 GALELGKWIEAY-IERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSV 306
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV A +G + +EA FE M +GV D
Sbjct: 307 IVGMAMHG-------------------------------RGQEATCLFEEMTSSGVAPDD 335
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V +G++SAC+ G+++ + + + P + ++DMY + G + +A
Sbjct: 336 VAFIGLLSACSHSGLVERGREYFGSMMKKYKLVP--KIEHYGCMVDMYCRTGLVKEALEF 393
Query: 245 FVGM 248
M
Sbjct: 394 VRNM 397
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 336/563 (59%), Gaps = 21/563 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGH-LKDSISLYCSMRRE-GIGPVSFTLSALFK 60
S+ +F+Q+ + F++ +I+ + L H +S+ ++ S+ ++ G+ P ++ F
Sbjct: 64 SYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFS 123
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L V G+Q+ + +G ++++V N +IGMY K G +G S+KVF +RD+
Sbjct: 124 ACGNGLGVQEGEQVRIHAVKVG-LENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLY 182
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW LI AY +G+M A LF+ + +D V+W+ ++ GYVQ EA+++F +M G
Sbjct: 183 SWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIG 242
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ + TLV ++AC+ L + W+ G G +N ++ S +IDMY+KCG I+
Sbjct: 243 PKPNEYTLVSALAACSNLVALDQGKWIHAYI-GKGEIKMNERLLAS-IIDMYAKCGEIES 300
Query: 241 AYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A R+F K ++ V+ +++MI GFAMHG + AI +F M + PN VTFI +L ACS
Sbjct: 301 ASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACS 360
Query: 300 H------------VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H + + Y ++P +HY CMVDLL R+G L+EA M+ MP+ P+ +W
Sbjct: 361 HGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIW 420
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+I+++ E + ++P+ IG +++LSNIY+++G W++ +R +++
Sbjct: 421 GALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEIS 480
Query: 408 -GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
KK PG S +E +G H+F GD +HP S EI L ++ +L++ GY P L +L+
Sbjct: 481 RDRKKIPGCSSIEL-KGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLH 539
Query: 467 DVSDEEKKRI-LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D+ DEE K L HSEKLA+AFGL+ T+ G +RI+KNLR+C DCH S+V R
Sbjct: 540 DIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRV 599
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD R+HHF+DG CSC +YW
Sbjct: 600 IIVRDRTRYHHFEDGICSCKDYW 622
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
++S R+ FE + +LW A+I G+ + G ++I+++ M+ E I P T AL
Sbjct: 298 IESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLN 357
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDV 119
AC+ V G+ + T ++ M+ + + G L + + MP DV
Sbjct: 358 ACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDV 417
Query: 120 VSWTELIVAYANNGDME 136
W L+ A DME
Sbjct: 418 AIWGALLNACRIYKDME 434
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 309/542 (57%), Gaps = 53/542 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ +L+ GY L +KD + L+C MR G+ T+ L + C ++ LG +H +
Sbjct: 81 YNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCV 140
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G D VGN ++ MYVK G + C RK
Sbjct: 141 KFG-LDMDSSVGNCLLTMYVKSGEIDCGRK------------------------------ 169
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF+E+P K + W AM+ GY QN +E ++ M+ G D +TLVGV+S+CA LG
Sbjct: 170 -LFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLG 228
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ V EG GF +N + +AL++MY++CG++ A IF GM ++V S++++
Sbjct: 229 ALSVGKEVERKMEGFGFS--SNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAI 286
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I G+ MHG+ A+ LF +M++ KP+G F+ VL+ACSH GL + YG
Sbjct: 287 IGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYG 346
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY+CMVDLLGRAG L EA +++E M V +G +WGALLGAC+IHRN E+A++A
Sbjct: 347 LRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAF 406
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ ELEP G Y++LSN+Y AG + + RVR L++ LKK+PG S++E +G +H
Sbjct: 407 EQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVE-FKGRVHL 465
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F AGD HP + EI + L +L + ++ DG + N EE + HSEKLA+
Sbjct: 466 FFAGDRNHPQTNEIYKKLNELENLVKDLDGCKKNDHE-----RREEYLNSMGVHSEKLAV 520
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AF LL T + I+KNLRIC DCHLF+ S+++ R+ VVRD RFHHF++G CSC
Sbjct: 521 AFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKE 580
Query: 547 YW 548
YW
Sbjct: 581 YW 582
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 44/332 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R G P +FT K+C + G+Q+H G + +V ++I MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLL-EPFVQTSLISMYGKCS 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ +RK+FDE N K V + ++++GY
Sbjct: 60 LIDNARKLFDE-----------------------------NPQSRKLTVCYNSLLSGYAL 90
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N++ ++ + F M+ GVE + VT++G++ C G + +C FG +
Sbjct: 91 NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLG--MCVHGFCVKFGLDMDS 148
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
VG+ L+ MY K G ID ++F M ++ + ++++MI G+A +G A+ ++L+ +M
Sbjct: 149 SVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESK 208
Query: 283 ETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
P+ +T +GVL++C+H+G ++ +G S + +V++ R G L++A
Sbjct: 209 GFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKA 268
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ + MPV+ W A++G +H E+A
Sbjct: 269 RDIFDGMPVKSVVS-WTAIIGGYGMHGQGEVA 299
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 36/285 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K W A+I GY G + + LY M +G P TL + +C +
Sbjct: 168 RKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHL 227
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S+G+++ + GF+S+ ++ N ++ MY +CG L +R +FD MP + VVSWT +
Sbjct: 228 GALSVGKEVERKMEGF-GFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAI 286
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y +G E A GLF+E M+ G G++ D
Sbjct: 287 IGGYGMHGQGEVAVGLFDE-----------MIRG--------------------GIKPDG 315
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V V+SAC+ G+ K ++ + G P S ++D+ + G +++A +
Sbjct: 316 TAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRP--GAEHYSCMVDLLGRAGRLNEAREL 373
Query: 245 FVGMKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNG 288
M+ R + +LG +H A F +++ E G
Sbjct: 374 IESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/616 (35%), Positives = 338/616 (54%), Gaps = 80/616 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ ++ W LI+ YI D+I+L+C + + + P SFTL + K C +
Sbjct: 71 LFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGA 129
Query: 68 VSLGQQIHAQTILLGGFTSDLYV-------------------------------GNTMIG 96
+ G+QIH +L GF D +V N++I
Sbjct: 130 LQEGKQIHG-LVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLID 188
Query: 97 MYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
Y +CG + + ++F+EMPE+D SWT LI + +G +E+A +F+ +P+++ V+W AM
Sbjct: 189 GYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAM 248
Query: 157 V-------------------------------TGYVQNAKPREAIEYFERMQYAGVETDY 185
+ TGY +N + +A++ FE M + +Y
Sbjct: 249 INGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNY 308
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T++G +SA + + + WV SGF + V+G+ LI+MYSKCGS+ A R+F
Sbjct: 309 TTILGAVSAASGMVSLGTGRWVHSYIVKSGFK--TDGVLGTLLIEMYSKCGSVKSALRVF 366
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
+ ++ + ++S+I+G MHG ++LF +M +T KP+ +TFIGVL ACSH G
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAE 426
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS +HY C++D+L RAG LEEA +E+MP++ N +W +LL
Sbjct: 427 DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+ H N + + AA HL +L PD G Y+ILSN+YA+AG+W+ V +VR ++K G+KK+P
Sbjct: 487 SRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDP 546
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV-SDEE 472
G S +E +G IHEF GD +HP + EI L ++ +L G+ P+ VL + D E
Sbjct: 547 GCSSIE-HQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNE 605
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L THSE+LA+AFGLL G+ +RI+KNLRIC DCH S + REI++RD
Sbjct: 606 KEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGS 665
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSC ++W
Sbjct: 666 RFHHFKSGSCSCKDFW 681
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 145/283 (51%), Gaps = 24/283 (8%)
Query: 123 TELIVAYANN--GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ L+ YA+ +++ A LF+ + V+W ++ Y++N + +AI F ++
Sbjct: 51 SRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDF 110
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V D TL V+ CA+LG ++ + + GFG ++ V+ S+L+ MYSKCG I+
Sbjct: 111 V-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG-VDKFVL-SSLVSMYSKCGEIEL 167
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-----NGVTFIGVL 295
++F M+ ++V S++S+I G+A G A+++F +M + ++ +G++ G L
Sbjct: 168 CRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKL 227
Query: 296 TACSHVGLKCYGVSP--STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
A V + P ++ + M++ +AG A ++ ++MP E + W +++
Sbjct: 228 EAARDV----FDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMP-ERSLVTWNSMITG 282
Query: 354 CQIHRNPEIAQIAANHLFE--LEPDKIGNY-IILSNIYASAGM 393
+ RN + + A LFE L D NY IL + A++GM
Sbjct: 283 YE--RNKQFTK--ALKLFEVMLREDISPNYTTILGAVSAASGM 321
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/553 (38%), Positives = 309/553 (55%), Gaps = 46/553 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT+LI GY +++ L M R P FT ++L KA
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+QIHA T+ + D+YVG+ ++ MY +CG
Sbjct: 179 ASSGIGEQIHALTVKYD-WHDDVYVGSALLDMYARCG----------------------- 214
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F++L K+ V+W A++ G+ + + F MQ G E +
Sbjct: 215 --------RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V SA A +G ++ WV A G + VG+ ++DMY+K GS+ DA ++F
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVH--AHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +++V +++SM+ FA +G A+ F +M K N +TF+ +LTACSH GL
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK 384
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y + P DHY +VDLLGRAG L +AL + KMP++P VWGALLG+C
Sbjct: 385 EGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N +I Q AA+H+FEL+PD G ++L NIYAS G WD +RVR+++K TG+KK P
Sbjct: 445 RMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPA 504
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP S EI + ++ +++ GY PN VL V ++E++
Sbjct: 505 CSWVEIENSV-HMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQ 563
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF L+ GAT+RIMKN+RIC DCH S+V REIVVRD RF
Sbjct: 564 AKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRF 623
Query: 535 HHFQDGKCSCGNY 547
HHF G CSCG+Y
Sbjct: 624 HHFSSGSCSCGDY 636
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 58/258 (22%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGG-FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+L AC + + IHA L G F +++ N++I +Y KCG + +R+VFD M
Sbjct: 69 SLITACARYRSLDDARAIHAH--LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
P +D +WT+++ GY QN P EA+
Sbjct: 126 ------------------------------PARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 176 MQYAGVETD---YVTLVGVISACAQLGV--------IKYANWVCEIAEGSGFGPINNVVV 224
M + + + +L+ A A G+ +KY +W ++V V
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKY-DWH------------DDVYV 202
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
GSAL+DMY++CG +D A +F ++ +N S++++I GFA G + +F +M +
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262
Query: 285 KPNGVTFIGVLTACSHVG 302
+ T+ V +A + +G
Sbjct: 263 EATHFTYSSVFSAIAGIG 280
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
R+ ++ + + A Y +L I+ACA+ + A + GS F +V + +
Sbjct: 49 RDTLDSVDARELAATPRLYHSL---ITACARYRSLDDARAIHAHLAGSQFA--GSVFLDN 103
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+LI +Y KCG++ DA R+F GM R++ S++S+I G+A + A+ L M++ KP
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 287 NGVTFIGVL-----TACSHVGLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMV 335
NG TF +L +A S +G + + ++ D + + ++D+ R G ++ A+ +
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223
Query: 336 EKMPVEPNGGVWGALLG 352
+++ + NG W AL+
Sbjct: 224 DQLESK-NGVSWNALIA 239
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 319/555 (57%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V + + +N WTA+I GY G +++ L+ M R G FTL+ + +C
Sbjct: 96 RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +Q+H+ ++ F S ++VG++++ MY K G + +RKV
Sbjct: 156 QSIQQVEQVHS-LVVKTNFESHMFVGSSLLDMYGKSGNIQEARKV--------------- 199
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ LP +D V+ TA+++GY Q EA++ F ++ +G++ +Y
Sbjct: 200 ----------------FDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNY 243
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT ++++ + L + Y V + +V+ ++LIDMYSKCG + + R+F
Sbjct: 244 VTFTTLLTSLSGLASLNYGKQVHGLILRKELPFF--IVLQNSLIDMYSKCGKLLYSRRVF 301
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M QR+ S+++M++G+ HG +QLF M + E KP+ VT + VL+ CSH GL
Sbjct: 302 DNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVD 360
Query: 306 YGVSP------------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G+ HY C++DLLGR+G L++AL ++E MP EP +WG+LLGA
Sbjct: 361 EGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGA 420
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N + ++ A L ++EP GNY+ILSNIYA+AGMW DV RVR+L+ + K P
Sbjct: 421 CRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEP 480
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+ D+ VIH F + + HP +I + ++ ++A G+ P+L VL+DV DE+K
Sbjct: 481 AKSWIILDK-VIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQK 539
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+R+L+ HSEKLA+ FGL+ T PG T+++MKNLRIC DCH F S+V GREI +RD R
Sbjct: 540 ERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNR 599
Query: 534 FHHFQDGKCSCGNYW 548
FH +DG C+CG+YW
Sbjct: 600 FHLLKDGACTCGDYW 614
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 142/275 (51%), Gaps = 15/275 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI+ Y G ++ A + + +P ++ V+WTAM++GY Q+ + EA+E F RM AG +
Sbjct: 80 TRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCK 139
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ TL V+++C I+ V + + F +++ VGS+L+DMY K G+I +A
Sbjct: 140 ANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFE--SHMFVGSSLLDMYGKSGNIQEAR 197
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
++F + +R+ S +++I G+A G A+ LF + + + N VTF +LT+ S
Sbjct: 198 KVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLA 257
Query: 300 --HVGLKCYGVSPSTD------HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ G + +G+ + ++D+ + G L + ++ + MP + + W A+L
Sbjct: 258 SLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNAML 316
Query: 352 GACQIHR-NPEIAQIAANHLFELEPDKIGNYIILS 385
H E+ Q+ E++PD + +LS
Sbjct: 317 MGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLS 351
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + + LI +Y +CG++DDA + GM +RNV S+++MI G++ GR A++LF M++
Sbjct: 76 VYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLR 135
Query: 282 TETKPNGVTFIGVLTACS-HVGL----KCYGVSPSTDHYACM------VDLLGRAGCLEE 330
K N T VLT+C H + + + + T+ + M +D+ G++G ++E
Sbjct: 136 AGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQE 195
Query: 331 ALKMVEKMP 339
A K+ + +P
Sbjct: 196 ARKVFDMLP 204
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 317/556 (57%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+Q+ N F WTA+I GY+ +G + ++++ L+ M + P FT S+ KAC
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + +G+Q+ + LG F+S V N++I MY
Sbjct: 389 LAALRIGEQVFTHAVKLG-FSSVNCVANSLISMY-------------------------- 421
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A +G ++ A F+ L K+ +++ ++ Y +N EA+E F ++ G+
Sbjct: 422 -----ARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T ++S A +G I + SG N V +ALI MYS+CG+I+ A+++
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL--NQSVCNALISMYSRCGNIESAFQV 534
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ RNV S++S+I GFA HG A A++LF M++ +PN VT+I VL+ACSHVGL
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLV 594
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+GV P +HYAC+VD+LGR+G L EA++ + MP + + VW LG
Sbjct: 595 NEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLG 654
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AA + E EP YI+LSN+YAS WD+VS +R+ +K L K
Sbjct: 655 ACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKE 714
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + V H+F GD +HP + EI L +L +++ GY PNL VL+DV +E+
Sbjct: 715 AGCSWVEVENKV-HKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQ 773
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+++L HSEK+A+AFGL++TS +R+ KNLRIC DCH + S GREI+VRD
Sbjct: 774 KEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDAN 833
Query: 533 RFHHFQDGKCSCGNYW 548
RFHH +DG+CSC YW
Sbjct: 834 RFHHIKDGRCSCNEYW 849
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 50/365 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ +N WT +I + G+ ++I L+ M G P FTLS + AC +
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMEL 286
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
+ LGQQ+H+Q I G T D VG +I MY KC G + +RK+FD++ + +V SWT
Sbjct: 287 LLLGQQLHSQAI-RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT- 344
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGVET 183
AM+TGYVQ EA++ F M V
Sbjct: 345 ------------------------------AMITGYVQKGGYDEEALDLFRGMILTHVIP 374
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ T + ACA L ++ V A GF +N V ++LI MY++ G IDDA +
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN--CVANSLISMYARSGRIDDARK 432
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + ++N+ SY+++I +A + + A++LF ++ + TF +L+ + +G
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 304 ---------KCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + C ++ + R G +E A ++ E M + N W +++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Query: 353 ACQIH 357
H
Sbjct: 552 GFAKH 556
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+A++ + ++ + M G P + +A +AC+ VS+G I I
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVI 195
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G SD+ VG +I M+VK GD+ SA
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVK------------------------------GRGDLVSAF 225
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F ++P ++ V WT M+T +Q EAI+ F M ++G E D TL GVISACA +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDDAYRIFVGMKQRNVFSY 256
++ + A G + VG LI+MY+KC GS+ A +IF + NVFS+
Sbjct: 286 LLLLGQQLHSQAIRHGLTL--DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343
Query: 257 SSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++MI G+ G A+ LF M+ T PN TF L AC+++
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 35/296 (11%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+ NP T + I G L +IS M +G P T S K C +G
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+H + + D N++I +Y KCG W
Sbjct: 88 VH-EKLTQSDLQLDSVTLNSLISLYSKCG------------------QW----------- 117
Query: 134 DMESAGGLFNEL-PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
E A +F + +D ++W+AMV+ + N A+ F M G +
Sbjct: 118 --EKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAAT 175
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSIDDAYRIFVGMKQR 251
AC+ + + + +G+ ++V VG LIDM+ K G + A+++F M +R
Sbjct: 176 RACSTAEFVSVGDSIFGFVIKTGYLQ-SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER 234
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
N +++ MI G A AI LF DM+ + +P+ T GV++AC+++ L G
Sbjct: 235 NAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 318/558 (56%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRG-YILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKA 61
+ R +F Q++ N F W ++IRG Q K+ + L+ M R G P +FT++ + KA
Sbjct: 42 YARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKA 101
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ V + GQQ+HA +L GF S +V ++ Y KC
Sbjct: 102 CSIVSALEEGQQVHAN-VLKSGFGSSPFVETALVNFYAKCE------------------- 141
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
D+ A +F+E+ ++ VAW+ M++GY + EA+ F MQ AGV
Sbjct: 142 ------------DIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGV 189
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT+V VISACA G + WV ++ + +AL++MY+KCG I+ A
Sbjct: 190 VPDEVTMVSVISACAASGALDTGKWVHAYINKQLIE--TDLELSTALVNMYAKCGCIERA 247
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M ++ ++SSMI+G A++G A A++ F M + + KPN VTFIGVL+AC+H
Sbjct: 248 KEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHS 307
Query: 302 GLKC-----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL +G+ PS + Y CMVDLL RA +E+A +VE MP+ PN +W L
Sbjct: 308 GLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTL 367
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ +N + +++ A L ELEP NYI+LSN+YAS W+ +S+VR+ +K G+K
Sbjct: 368 LVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIK 427
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
PG S +E D G++HEF GD +HP + E+++ L D+ R+ A G+QP + VL++V D
Sbjct: 428 AVPGCSSIEVD-GLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVD 486
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L HSE+LA+A+GLL T +RI+KNLR+C DCH S REI+VRD
Sbjct: 487 EEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRD 546
Query: 531 NMRFHHFQDGKCSCGNYW 548
+RFH F +G CSC ++W
Sbjct: 547 RVRFHKFVNGSCSCRDFW 564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 20/289 (6%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP-REAIEYFERMQYAGVET-DY 185
A + GD++ A LF+++ + +W +M+ G Q+ P +E + F +M G +
Sbjct: 33 ALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNT 92
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ V+ AC+ + ++ V SGFG ++ V +AL++ Y+KC I A ++F
Sbjct: 93 FTMAFVLKACSIVSALEEGQQVHANVLKSGFG--SSPFVETALVNFYAKCEDIVLASKVF 150
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ RN+ ++S+MI G+A G + A+ LF DM K P+ VT + V++AC+ G
Sbjct: 151 DEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 210
Query: 306 YG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G + + +V++ + GC+E A ++ + MPV+ + W +++
Sbjct: 211 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGL 269
Query: 355 QIHRNPEIAQIAANHLFELEPDKIG-NYIILSNIYASAGMWDDVSRVRR 402
I+ +A+ A F +E K+ N++ + ++ VS RR
Sbjct: 270 AIN---GLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRR 315
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/558 (39%), Positives = 327/558 (58%), Gaps = 49/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREGI-GPVSFTLSALFKA 61
+ R +F Q+ F + ++IRG + K+ I L+ M +G P +FT++ + KA
Sbjct: 42 YARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKA 101
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ ++ + G+QIHAQ IL GF+S YV ++++ Y KC + +RKVFDE+ ER++
Sbjct: 102 CSIIMALEEGKQIHAQ-ILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNL-- 158
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
V W+AMV+GY + EA+ F MQ G+
Sbjct: 159 -----------------------------VCWSAMVSGYARLGMINEALIMFREMQVVGI 189
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E D V+LVGV+SACA +G + WV + ++ + +ALI+MY+KCG I+ A
Sbjct: 190 EPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHV--DLELNTALINMYAKCGCIEKA 247
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
IF M+ ++ ++SSMI+G A+HG A A+ +F M + + KPN VTFIG+L+AC+H
Sbjct: 248 REIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHG 307
Query: 302 GL----KCY-------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL K Y G+ PS +HY CMVDLL R G ++EA +P P+ +W L
Sbjct: 308 GLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTL 366
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L A +R + A++ A L ELEP K NYIIL+N+YAS + VS VR+++K G+K
Sbjct: 367 LVAYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIK 426
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
PG + +E D G +H F GD +HP + EI++ L D+ ++ GY+P + VL+ V+D
Sbjct: 427 ALPGCTSIEVD-GFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVSVVLHLVND 485
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ +L HSE+LA+A+GL+ T AT+RI+KNLR+C DCH S++ REI+VRD
Sbjct: 486 EEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRD 545
Query: 531 NMRFHHFQDGKCSCGNYW 548
+RFH F +G CSC +YW
Sbjct: 546 RVRFHKFVNGTCSCKDYW 563
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 122/238 (51%), Gaps = 16/238 (6%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP-REAIEYFERMQYAGVET-DYVTLVG 190
G+ + A +F+++P A+ +++ G + P +E I F+ M G + T+
Sbjct: 38 GNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAF 97
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V+ AC+ + ++ + SGF ++ V S+L++ YSKC I A ++F + +
Sbjct: 98 VLKACSIIMALEEGKQIHAQILRSGFS--SSPYVQSSLVNFYSKCEEITIARKVFDEITE 155
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------- 302
RN+ +S+M+ G+A G + A+ +F +M +P+ V+ +GVL+AC+ VG
Sbjct: 156 RNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWV 215
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+K + + ++++ + GC+E+A ++ ++M V+ + W +++ IH
Sbjct: 216 HAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVK-DSKAWSSMIVGLAIH 272
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 324/556 (58%), Gaps = 20/556 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F+++ ++ W +++ Y ++S++ M + + P F + L KAC +
Sbjct: 59 LFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLC 118
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+Q+HA+ +L F D V ++++ MY KCG +R VFD + + VSWT ++
Sbjct: 119 SLRLGKQVHARFVL-SPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAML 177
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDY 185
YA +G + A LF P+++ +WTA+++G VQ+ + F M+ GV+ D
Sbjct: 178 SGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDP 237
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ L V+ ACA L V+ + + GSG+ + + + +AL+DMY+KC I A +F
Sbjct: 238 LVLSSVVGACANLAVLGLGKQIHGLVIGSGYE--SCLFISNALVDMYAKCSDILAARNVF 295
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M R+V S++S+I+G A HGRA A+ L+ MV E KPN VTF+G++ ACSH GL
Sbjct: 296 NRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVS 355
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y +SPS + C +DLL R+G L EA +++ MP +P+ W ALL A
Sbjct: 356 KGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSA 415
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H N E+ A+ L L + Y++LSN+YA AG W+ +SRVR+L+ +K+ P
Sbjct: 416 CKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKP 475
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
GYS ++ G + F AG+ HP EI L +L ++ GY P+ VL+D+ ++E
Sbjct: 476 GYSSIDLGKESQV--FHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQE 533
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+R L HSE+ A+A+GLL PG +RI+KNLRIC DCH F+ S ++ +EI+VRD
Sbjct: 534 KERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDAT 593
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DG+CSC ++W
Sbjct: 594 RYHHFKDGRCSCNDFW 609
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 68/309 (22%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGY-------------------------------IL 29
+ S R VF+ + K WTA++ GY +
Sbjct: 154 LPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQ 213
Query: 30 QGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDL 88
G+ D ++ MRREG+ V LS++ AC + + LG+QIH ++ G+ S L
Sbjct: 214 SGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHG-LVIGSGYESCL 272
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
++ N ++ MY KC + +R VF+ M RDVVSWT +IV
Sbjct: 273 FISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIV--------------------- 311
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
G Q+ + +EA++ +++M A ++ + VT VG+I AC+ G++ +
Sbjct: 312 ----------GAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLF 361
Query: 209 E-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMH 266
+ + E P ++ + + +D+ S+ G +++A + M + + ++++++ H
Sbjct: 362 KAMIEDYRISP--SLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHH 419
Query: 267 GRAHAAIQL 275
G +++
Sbjct: 420 GNTEMGVRI 428
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
K CT+ ++IHAQ I+ G + NT++ Y KC L + +FDEMP+RD
Sbjct: 9 LKLCTKHQAPLNAKKIHAQ-IVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRD 67
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VSW ++ AY +LP K + M T +R+Q
Sbjct: 68 HVSWASILTAYNQ-----------AKLPNKTLSIFHYMFTT--------------DRLQ- 101
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ ++ ACA L ++ V S F +++ VV S+L+DMY+KCG
Sbjct: 102 ----PDHFVYATLLKACASLCSLRLGKQVHARFVLSPF--VDDDVVKSSLVDMYAKCGLP 155
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
A +F + + S+++M+ G+A G A++LF
Sbjct: 156 SIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELF 193
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/552 (38%), Positives = 318/552 (57%), Gaps = 47/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ WT LI GY G ++++L+ M G P FTLS+L KA
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+HA + L G+ +++VG++++ MY + W
Sbjct: 222 DHHGRQLHAFS-LKYGYDMNVHVGSSLLDMYAR---------------------WAH--- 256
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M A +FN L K+ V+W A++ G+ + + + F +M G E + T
Sbjct: 257 -------MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFT 309
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA G ++ WV SG PI +G+ LIDMY+K GSI DA ++F
Sbjct: 310 YSSVL-ACASSGSLEQGKWVHAHVIKSGGQPI--AYIGNTLIDMYAKSGSIKDAKKVFRR 366
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++++ S++S+I G+A HG A+QLF M+K + +PN +TF+ VLTACSH GL
Sbjct: 367 LVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG 426
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
K + + H+ +VDLLGRAG L EA K +E+MP++P VWGALLGAC++
Sbjct: 427 QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRM 486
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+N ++ AA +FEL+P G +++LSNIYASAG D ++VR+++K +G+KK P S
Sbjct: 487 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 546
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E + V H F A D +HP EIQ+ + +++ GY P+ VL+ ++ ++++
Sbjct: 547 WVEIENEV-HVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELK 605
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEKLALAF +L T PG T+RI KN+RIC DCH AS+V+GREI+VRD RFHH
Sbjct: 606 LQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHH 665
Query: 537 FQDGKCSCGNYW 548
F G CSC +YW
Sbjct: 666 FLHGMCSCRDYW 677
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 165/371 (44%), Gaps = 48/371 (12%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
+ P S + CT + + G+ IHA I F DL + N ++ MY KCG
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCG---- 154
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+E A LF+++P KD V+WT +++GY Q+ +
Sbjct: 155 ---------------------------SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQA 187
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+ F +M + G + + TL ++ A + + + G+ NV VGS
Sbjct: 188 SEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD--MNVHVGS 245
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+L+DMY++ + +A IF + +NV S++++I G A G ++LF M++ +P
Sbjct: 246 SLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEP 305
Query: 287 NGVTFIGVLTACS----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
T+ VL S H + G P ++D+ ++G +++A K+
Sbjct: 306 THFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 365
Query: 337 KMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHL-FELEPDKIGNYIILSNIYASAGMW 394
++ V+ + W +++ G Q E Q+ L +++P++I +L+ + +G+
Sbjct: 366 RL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC-SHSGLL 423
Query: 395 DDVSRVRRLLK 405
D+ L+K
Sbjct: 424 DEGQYYFELMK 434
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 40/276 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+++F + KN W ALI G+ +G + + L+ M R+G P FT S++ AC
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASS 319
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +HA I GG Y+GNT+I MY K G + ++KVF + ++D+VSW +
Sbjct: 320 GSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSI 378
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G G EA++ FE+M A V+ +
Sbjct: 379 ISGYAQHG----LGA---------------------------EALQLFEQMLKAKVQPNE 407
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T + V++AC+ G++ + E+ + V ++D+ + G +++A +
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA--QVAHHVTVVDLLGRAGRLNEANKFI 465
Query: 246 VGMKQRNVFSYSSMILGFA-MHGR----AHAAIQLF 276
M + + +LG MH +AA Q+F
Sbjct: 466 EEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIF 501
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 320/555 (57%), Gaps = 45/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ W A+I GY+ + K+++ LY M + + P T+ + AC +
Sbjct: 151 RKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQS 210
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q+H+ I GF S++ + N +I +Y KCG
Sbjct: 211 GSIELGRQLHSW-IEDHGFGSNIKIVNVLIDLYSKCG----------------------- 246
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E+A GLF L KD ++W ++ G+ +EA+ F+ M +G +
Sbjct: 247 --------EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPND 298
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ V+ ACA LG I W+ G N + ++LIDMY+KCG I+ A ++F
Sbjct: 299 VTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVF 358
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M R++ S+++MI GFAMHG+A+AA LF M K P+ +TF+G+L+ACSH G+
Sbjct: 359 DSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLD 418
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y ++P +HY CM+DLLG G +EA +M+ MP+EP+G +W +LL A
Sbjct: 419 LGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H N E+ + A +L ++EP+ G+Y++LSNIYA+AG WD V+++R LL G+KK P
Sbjct: 479 CKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAP 538
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D V+HEF GD HP + EI + L ++ ++ G+ P+ VL ++ +E K
Sbjct: 539 GCSSIEID-SVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWK 597
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD R
Sbjct: 598 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 657
Query: 534 FHHFQDGKCSCGNYW 548
H +DG SC +YW
Sbjct: 658 LHLLKDGVWSCHDYW 672
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 220/412 (53%), Gaps = 28/412 (6%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +FE ++ N +W + RG+ L ++ LY M G+ P S++ L K+C
Sbjct: 16 SYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSC 75
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + GQQIH + LG + D+YV ++I MY + G L + KVFD R VVS+
Sbjct: 76 AKSKALIEGQQIHGHVLKLG-YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI YA+ G + +A LF+E+ +KD V+W AM++GYV+ +EA+E ++ M V+
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V V+SACAQ G I+ + E GFG +N+ + + LID+YSKCG ++ A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFG--SNIKIVNVLIDLYSKCGEVETAC 252
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F G+ +++V S++++I G A+ LF +M+++ PN VT + VL AC+H+G
Sbjct: 253 GLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 312
Query: 303 L-------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ GV+ ++ ++D+ + G +E A ++ + M + + W A
Sbjct: 313 AIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNA 371
Query: 350 LLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWD 395
++ +H AA LF ++PD I ++ L + + +GM D
Sbjct: 372 MIFGFAMHGKAN----AAFDLFSKMRKNGIDPDDI-TFVGLLSACSHSGMLD 418
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 305/555 (54%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W L+ G +G +++ M REG P SFTLS + E
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC 183
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G ++H GF SD++VG+++I MY C S KV
Sbjct: 184 ADVKRGLEVHGFA-FRNGFDSDVFVGSSLIDMYANCTRTDYSVKV--------------- 227
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ LP++D + W +++ G QN EA+ F RM AGV
Sbjct: 228 ----------------FDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP 271
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT +I C L +++ + GF +NV + S+LIDMY KCG I A+ IF
Sbjct: 272 VTFSSLIPVCGNLASLRFGKQLHAYVICGGFE--DNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +V S+++MI+G+A+HG A A+ LF M KPN +TF+ VLTACSH GL
Sbjct: 330 DKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD 389
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ P+ +H+A + D LGRAG L+EA + KM ++P VW LL A
Sbjct: 390 KGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N +A+ A + ELEP IG++++LSN+Y+++G W++ + +R ++ G+KK+P
Sbjct: 450 CRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDP 509
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F A D +HP I AL +++ +G+ PN V D+ +E K
Sbjct: 510 ACSWIEV-KSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHK 568
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+L HSEKLA+ FG+++T G +R+MKNLR+C DCH S++ REIVVRD R
Sbjct: 569 SYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANR 628
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG++W
Sbjct: 629 FHHFKDGNCSCGDFW 643
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 33/353 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGI--GPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
W IR +GH D++SL+ MR V +L A K+C + +LG +HA
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 78 TILLGGFTSDLYVGNTMIGMYVK--CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
I G F +D + N ++ +Y K C +L + ++P ++
Sbjct: 76 AIRSGAF-ADRFTANALLNLYCKVPCSYLDSTGVAIVDVP--------------GSSTAF 120
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
ES +F+E+ +D V+W +V G + + EA+ + +M G D TL V+
Sbjct: 121 ESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIF 180
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A+ +K V A +GF ++V VGS+LIDMY+ C D + ++F + R+
Sbjct: 181 AECADVKRGLEVHGFAFRNGFD--SDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHIL 238
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLK 304
++S++ G A +G A+ +F M++ +P VTF ++ C H +
Sbjct: 239 WNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI 298
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
C G + + ++D+ + G + A + +KM P+ W A++ +H
Sbjct: 299 CGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALH 350
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 314/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W LI G ++++S+ M R+G P +FTLS + E
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G +H I GF +D++VG+++I MY
Sbjct: 184 ADIKRGMVVHGYAIK-NGFDNDVFVGSSLIDMY--------------------------- 215
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AN M+ + +F+ D V W +M+ GY QN EA+ F RM AGV
Sbjct: 216 ----ANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVP 271
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT +I A L +++ + + F +N+ + S+LIDMY KCG++D A R+F
Sbjct: 272 VTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN--DNIFISSSLIDMYCKCGNVDIARRVF 329
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G++ ++ S+++MI+G+A+HG A LF M KPN +TF+ VLTACSH GL
Sbjct: 330 NGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVD 389
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG PS +H A + D LGRAG L+EA + +M ++P VW LL A
Sbjct: 390 NGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 449
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N +A+ A +FELEP +G+++ILSN+Y+++G W++ +++R+ +++ G+KK P
Sbjct: 450 CRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEP 509
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F A D +HP I AL +++ GY PN+ VL D+ +E+K
Sbjct: 510 ACSWIEV-KNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQK 568
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+ FG+++T PG T+R+MKNLR+C DCH+ S+++ REIVVRD R
Sbjct: 569 REVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNR 628
Query: 534 FHHFQDGKCSCGNYW 548
FH F+DG CSCG++W
Sbjct: 629 FHRFKDGNCSCGDFW 643
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 132/310 (42%), Gaps = 58/310 (18%)
Query: 17 PFLWTALIRGYILQGHLKDSISLYCSMRREGIGP---VSFTLSALFKACTEVLDVSLGQQ 73
P W IR QG +ISL+ M R + P V +L A K+C + +L
Sbjct: 12 PPSWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAAS 70
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKC-------GFLGCS-------------RKVFDE 113
+HA I G F +D + N ++ + +K G G S RKVFDE
Sbjct: 71 LHALAIRSGSF-ADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDE 129
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
M ERD VSW LI+ G ++ + +EA+
Sbjct: 130 MLERDAVSWNTLIL-------------------------------GCAEHKRHQEALSMV 158
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M G D TL V+ A+ IK V A +GF N+V VGS+LIDMY+
Sbjct: 159 REMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD--NDVFVGSSLIDMYA 216
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
C +D + ++F + ++SM+ G+A +G A+ +F M++ +P VTF
Sbjct: 217 NCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSS 276
Query: 294 VLTACSHVGL 303
++ A ++ L
Sbjct: 277 LIPAFGNLSL 286
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 320/558 (57%), Gaps = 50/558 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS---LYCSMRREGIGPVSFTLSALFKAC 62
R VF+++ K+ WT++I GY G+ + + L+ M R+G+ P F LS+L K C
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+QIH GF +++VG++++ MY +CG L SR V
Sbjct: 206 GFLGSCVDGKQIHG-CCWKYGFQENVFVGSSLVDMYARCGELRESRLV------------ 252
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
F+EL K++V+W A+++G+ + + EA+ F +MQ G
Sbjct: 253 -------------------FDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFG 293
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T ++ + + G ++ W+ SG + VG+ L+ MY+K G+I DA
Sbjct: 294 ATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVG--YVGNTLLHMYAKSGNICDAK 351
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHV 301
++F + + +V S +SM++G+A HG A++LF +M+ E +PN +TF+ VLTACSH
Sbjct: 352 KVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHA 411
Query: 302 GL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL K YG+ P HY +VDL GRAG L++A +E+MP+EPN +WGAL
Sbjct: 412 GLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGAL 471
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGA ++H+N E+ AA + EL+P G + +LSNIYASAG W DV++VR+ +K +GLK
Sbjct: 472 LGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLK 531
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K P SW+E + V H F A D++HP ++ + +L +++ GY P+ V V
Sbjct: 532 KEPACSWVEIENSV-HIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQ 590
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+EK+ L HSEKLALAF LL T PG+ +RIMKN+R+C DCH + S V+ REI+VRD
Sbjct: 591 QEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRD 650
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 651 TNRFHHFRDGSCSCRDYW 668
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 82/398 (20%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
+ P + L K CT + + G+ +H ++ F +DL + N+++ MY KCG L
Sbjct: 86 SLEPDRTIYNKLLKRCTMLGKLKQGKLVHTH-LMNSKFRNDLVIKNSILFMYAKCGSLEI 144
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R+VFDEM +DVV+WT +I Y+ +G SA TA+V
Sbjct: 145 ARQVFDEMCVKDVVTWTSMITGYSQDGYASSAT--------------TALV--------- 181
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
F M G+ + L ++ C LG + GF NV VGS
Sbjct: 182 -----LFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQ--ENVFVGS 234
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+L+DMY++CG + ++ +F ++ +N S++++I GFA G A+ LF M +
Sbjct: 235 SLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGA 294
Query: 287 NGVTFIGVLTACSHVG---------------------------LKCYGVSPS-------- 311
T+ +L + S G L Y S +
Sbjct: 295 TEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVF 354
Query: 312 -----TDHYACMVDLLGRA--GCLEEALKMVEKM----PVEPNGGVWGALLGACQIHR-- 358
D +C L+G A G +EA+++ E+M +EPN + ++L AC H
Sbjct: 355 DRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACS-HAGL 413
Query: 359 -NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
+ + + LEP K+ +Y + +++ AG+ D
Sbjct: 414 LDEGLYYFELMKKYGLEP-KLSHYTTVVDLFGRAGLLD 450
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 304/541 (56%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W L+ G+ G K ++ + M G+ P + T+S AC +V ++ LG++IH +
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY-V 525
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L VG+ +I MY C +E A
Sbjct: 526 LRNHIELSTGVGSALISMYSGCD-------------------------------SLEVAC 554
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+EL +D V W ++++ Q+ + A++ M + VE + VT+V + AC++L
Sbjct: 555 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 614
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + + G N ++ ++LIDMY +CGSI + RIF M QR++ S++ M
Sbjct: 615 ALRQGKEIHQFIIRCGLDTCNFIL--NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 672
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I + MHG A+ LF KPN +TF +L+ACSH GL Y
Sbjct: 673 ISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYA 732
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P+ + YACMVDLL RAG E L+ +EKMP EPN VWG+LLGAC+IH NP++A+ AA
Sbjct: 733 MDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAA 792
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+LFELEP GNY++++NIY++AG W+D +++R L+K G+ K PG SW+E R +H
Sbjct: 793 RYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRK-LHS 851
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD +HP +I + L ++ GY P+ VL DV ++EK+ L HSEK+ALA
Sbjct: 852 FVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALA 911
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGL++T+ G +RI+KNLR+C DCH S+V R+I++RDN RFHHF DG CSCG+Y
Sbjct: 912 FGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDY 971
Query: 548 W 548
W
Sbjct: 972 W 972
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 178/344 (51%), Gaps = 27/344 (7%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WTALI G G+ +++S++ M EG+ P S T+++ ACT + + G++IH
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
I + SDL VGN+++ Y KC + +R+ F + + D+VSW ++ YA G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 136 ESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
E A L +E+ + D + W +VTG+ Q + A+E+F+RM G++ + T+ G
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVV----VGSALIDMYSKCGSIDDAYRIFVG 247
++AC Q+ +K E G+ N++ VGSALI MYS C S++ A +F
Sbjct: 506 LAACGQVRNLKLGK------EIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
+ R+V ++S+I A GR+ A+ L +M + + N VT + L ACS +
Sbjct: 560 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
++C G+ ++D+ GR G ++++ ++ + MP
Sbjct: 620 KEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 206/431 (47%), Gaps = 81/431 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N F WTA++ Y G +++I L+ M EG+ P F +FKAC+E+
Sbjct: 144 RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV------ 119
+ +G+ ++ +L GF + V +++ M++KCG + +R+ F+E+ +DV
Sbjct: 204 KNYRVGKDVY-DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 262
Query: 120 -----------------------------VSWTELIVAYANNGDMESAGGLFNEL-PLKD 149
V+W +I YA +G E A F E+ LKD
Sbjct: 263 VSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKD 322
Query: 150 ----KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
V+WTA++ G QN EA+ F +M GV+ + +T+ +SAC L ++++
Sbjct: 323 FKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR 382
Query: 206 WV---CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ C E ++++VG++L+D Y+KC S++ A R F +KQ ++ S+++M+ G
Sbjct: 383 EIHGYCIKVEELD----SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAG 438
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLL 322
+A+ G AI+L +M +P+ +T+ G++T G YG
Sbjct: 439 YALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT-----GFTQYGD-------------- 479
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
G+A E + + M ++PN L AC RN ++ + +I Y+
Sbjct: 480 GKAAL--EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGK------------EIHGYV 525
Query: 383 ILSNIYASAGM 393
+ ++I S G+
Sbjct: 526 LRNHIELSTGV 536
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 49/314 (15%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+++ + C ++ ++ LG Q+HAQ +++ G ++G+ ++ +Y + G + +R++FD+M
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQ-LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
ER+V SWT ++ Y GD E E I+ F
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYE-------------------------------ETIKLFYL 180
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M GV D+ V AC++L + V + GF N V +++DM+ KC
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE--GNSCVKGSILDMFIKC 238
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +D A R F ++ ++VF ++ M+ G+ G A++ DM + KP+ VT+ ++
Sbjct: 239 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 296 TACSHVG---------LKCYGV---SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE-- 341
+ + G L+ G+ P+ + ++ + G EAL + KM +E
Sbjct: 299 SGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGV 358
Query: 342 -PNGGVWGALLGAC 354
PN + + AC
Sbjct: 359 KPNSITIASAVSAC 372
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+GS L+++Y + G ++DA R+F M +RNVFS+++++ + G I+LF MV
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 284 TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY---------AC----MVDLLGRAGCLEE 330
+P+ F V ACS LK Y V Y +C ++D+ + G ++
Sbjct: 186 VRPDHFVFPKVFKACSE--LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243
Query: 331 ALKMVEKMPVEPNGGVWGALLG--ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIY 388
A + E++ + + +W ++ + + I+ L ++PD++ I+S Y
Sbjct: 244 ARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-Y 301
Query: 389 ASAGMWDDVSRVRRLLKMTGLK 410
A +G +++ S+ L+M GLK
Sbjct: 302 AQSGQFEEASKY--FLEMGGLK 321
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 324/558 (58%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKAC 62
+ R +F+ + +N W+A+I GY+ +K+++ L+ M ++ + P TL ++ +AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ D+S G+++H I LG D+ +GNT++ MY KCG +
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGSVL-DILLGNTLLSMYAKCGVI------------------ 363
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A F+E+ KD V+++A+V+G VQN A+ F MQ +G++
Sbjct: 364 -------------DDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T++GV+ AC+ L +++ C G + ++ +ALIDMYSKCG I A
Sbjct: 411 PDLTTMLGVLPACSHLAALQHG--FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M + ++ S+++MI+G+ +HG A+ LF D++ KP+ +TFI +L++CSH G
Sbjct: 469 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG 528
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + + + P +H CMVD+LGRAG ++EA + MP EP+ +W AL
Sbjct: 529 LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL 588
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+IH+N E+ + + + L P+ GN+++LSNIY++AG WDD + +R K GLK
Sbjct: 589 LSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLK 648
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E + G++H F GD +H ++I + L +LL ++ GYQ V DV +
Sbjct: 649 KIPGCSWIEIN-GIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEE 707
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++IL+ HSEKLA+AFG+L G + + KNLR+C DCH + + + REI VRD
Sbjct: 708 EEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRD 767
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G C+CG++W
Sbjct: 768 ANRFHHFKNGTCNCGDFW 785
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 59/378 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ + LW +IR Y G +I LY SM G+ P +T + KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+L + G +IH+ + G E DV T
Sbjct: 121 GLLAIEDGVEIHSHAKMFG--------------------------------LESDVFVCT 148
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ YA G + A LF+ + +D VAW AM+ G +A++ +MQ G+
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T+VGV+ + + + + F N VVVG+ L+DMY+KC + A +
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD--NGVVVGTGLLDMYAKCQCLLYARK 266
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHV- 301
IF M RN S+S+MI G+ A++LF M+ K P VT VL AC+ +
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 302 ------GLKCYGVSPSTDHYACMVDLL---------GRAGCLEEALKMVEKMPVEPNGGV 346
L CY + + ++D+L + G +++A++ ++M P V
Sbjct: 327 DLSRGRKLHCYIIKLGS-----VLDILLGNTLLSMYAKCGVIDDAIRFFDEM--NPKDSV 379
Query: 347 -WGALLGACQIHRNPEIA 363
+ A++ C + N +A
Sbjct: 380 SFSAIVSGCVQNGNAAVA 397
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L +AC + ++ ++IH Q L +D V + + +Y+ C + +R++FDE+P
Sbjct: 14 LLEACIQSKSLTEAKKIH-QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ W ++I AYA NG + AI+ + M
Sbjct: 73 SVILWNQIIRAYAWNGPFDG-------------------------------AIDLYHSML 101
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ GV + T V+ AC+ G++ + V + FG ++V V +AL+D Y+KCG
Sbjct: 102 HLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGI 159
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ +A R+F M R+V ++++MI G +++G A+QL M + PN T +GVL
Sbjct: 160 LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219
Query: 298 CSHV-------GLKCYGVSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
L Y V S D+ ++D+ + CL A K+ + M V N
Sbjct: 220 VGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVS 278
Query: 347 WGALLG 352
W A++G
Sbjct: 279 WSAMIG 284
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 307/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ K+ W L+ G G +++ L M R+G P SFTLS++ E
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G ++H GF D++VG+++I MY C S KV
Sbjct: 187 ADVRRGMELHGFATR-NGFHDDVFVGSSLIDMYANCTRTDYSVKV--------------- 230
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ LP++D + W +M+ G QN EA+ F RM ++G++
Sbjct: 231 ----------------FDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMP 274
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT +I AC L + + GF NV + S+LIDMY KCG++ A RIF
Sbjct: 275 VTFSSLIPACGNLASLLLGKQLHAYVIRGGFD--GNVFISSSLIDMYCKCGNVSIARRIF 332
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++ ++ S+++MI+G A+HG A A+ LF M KPN +TF+ VLTACSH GL
Sbjct: 333 DRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVD 392
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS +H+A + D LGR G LEEA + M ++P VW LL A
Sbjct: 393 KGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N +A+ A +F+LEP +G++IILSN Y+S+G W++ + +R+ ++ G++K P
Sbjct: 453 CKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEP 512
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + H F A D +HP I AL +++ GY PN V D+ +E+K
Sbjct: 513 ACSWIEV-KNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQK 571
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+L HSEKLA+ FG+++T PG T+R+MKNLR+C DCH S+++GREIV+RD R
Sbjct: 572 NSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANR 631
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG++W
Sbjct: 632 FHHFKDGICSCGDFW 646
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 169/383 (44%), Gaps = 38/383 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACTEVLDVSLGQQIH 75
W IR QG +I+L+ MR V +L K+C + +LG +H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A + G F +D + N ++ +Y K L EM VV +
Sbjct: 82 ALALRSGAF-ADRFAANALLNLYCK---LPAPPSHSPEMDGSAVV--------------L 123
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
ES +F+E+P KD V+W +V G ++ + EA+ M G + D TL V+
Sbjct: 124 ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A+ ++ + A +GF ++V VGS+LIDMY+ C D + ++F + R+
Sbjct: 184 AEGADVRRGMELHGFATRNGFH--DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAIL 241
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGV 308
++SM+ G A +G A+ LF M+ + KP VTF ++ AC ++ L Y +
Sbjct: 242 WNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVI 301
Query: 309 SPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
D + ++D+ + G + A ++ +++ P+ W A++ +H A
Sbjct: 302 RGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ-SPDIVSWTAMIMGHALHGPAREAL 360
Query: 365 IAANH--LFELEPDKIGNYIILS 385
+ + L L+P+ I +L+
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLT 383
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 320/555 (57%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKACTEVL 66
+F++ ++ +++++L+ + ++ L C + + + P F +S++ +
Sbjct: 60 LFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLR 119
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+Q+HA ++ + D V ++++ MY KCG RKVFD M ++ V WT L+
Sbjct: 120 SRRLGRQLHAHFVV-SPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALV 178
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA+NG E A LF +P ++ AWTA+++G V + A+E F M+ GV D
Sbjct: 179 SGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDA 238
Query: 187 TLVG-VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ VI A L + GF ++N++VG+ALIDMYSKC I A +F
Sbjct: 239 FVLSIVIGGSADLAAFVLGRQLHGSTMRLGF--LSNMIVGNALIDMYSKCSDILSAREVF 296
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+ R+V S+++M++G A HGRA A+ L+ MV KPN VTF+G++ ACSH GL
Sbjct: 297 EGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQ 356
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG++P HY C +DLL R+G L EA +++ MP EP+ WGALL A
Sbjct: 357 KGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSA 416
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +++ E+ ++ L EL P YI+LSN+YA G WD V++VR+ + ++K P
Sbjct: 417 CTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEP 476
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E R F AG++ EI L +++ ++ GY P+ SV++D+ + EK
Sbjct: 477 GYSWIEAGRE-FRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEK 535
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSE+LA+AFGL+ + PG+ +R++KNLR+C DCH M S++ R+IVVRD+ R
Sbjct: 536 EHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSR 595
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ GKCSC +W
Sbjct: 596 FHHFEGGKCSCSEFW 610
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 65/275 (23%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCS----------------------- 42
R VF+ + KN +WTAL+ GY G ++++ L+ S
Sbjct: 160 RKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESV 219
Query: 43 --------MRREGIG-PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
MRR+G+ +F LS + ++ LG+Q+H T+ L GF S++ VGN
Sbjct: 220 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRL-GFLSNMIVGNA 278
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+I MY KC + +R+VF+ + RDV+SWT ++V A +G E
Sbjct: 279 LIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAE----------------- 321
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
EA+ ++RM AG + + VT VG+I AC+ G+++ + E +
Sbjct: 322 --------------EALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKN 367
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+G + + +D+ S+ G + +A + M
Sbjct: 368 E-YGITPRLQHYTCYLDLLSRSGHLLEAEELMTTM 401
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVET 183
L+ AYA + + A LF+E P +D +++++T +A P A+ M A +
Sbjct: 44 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 103
Query: 184 DYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ + V S A +LG +A++V G VV S+L+DMY KCGS
Sbjct: 104 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDD-------VVKSSLVDMYCKCGSP 156
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
DD ++F M +N +++++ G+A +GR+ A+QLF M
Sbjct: 157 DDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSM 197
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + +++ WT ++ G G +++++LY M G P T L AC+
Sbjct: 293 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 352
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G+Q+ G T L + + + G L + ++ MP E D +W
Sbjct: 353 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 412
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAK 165
L+ A D E + + EL KD + + Y N K
Sbjct: 413 LLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGK 456
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/549 (37%), Positives = 319/549 (58%), Gaps = 45/549 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W ALI GY G+ K+++ L+ M + + P T+ + AC +
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H+ I GF S+L + N +I +Y+KCG
Sbjct: 251 IELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCG------------------------- 284
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF L KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 285 ------EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVT 338
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACA LG I W+ + G N + ++LIDMY+KCG I+ A ++F
Sbjct: 339 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R++ S+++MI GFAMHGRA+ A +F M K +P+ +TF+G+L+ACSH G+
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M ++P+G +W +LL AC+
Sbjct: 459 RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACK 518
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+ + A +L ++EP G+Y++LSNIYA+AG W++V++ R LL G+KK PG
Sbjct: 519 MHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGC 578
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 579 SSIEID-SVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 536 HFQDGKCSC 544
HF DG CSC
Sbjct: 698 HFXDGVCSC 706
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 217/403 (53%), Gaps = 20/403 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ N +W + RG+ L ++ LY M G+ P S+T L KAC +
Sbjct: 59 VFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKA 118
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG DLYV ++I MYVK G +RKVFD+ RDVVS+T LI
Sbjct: 119 FREGQQIHGHVLKLGC-DLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIK 177
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+NG + SA +F+E+P+KD V+W A+++GY + +EA+E F+ M V+ D T
Sbjct: 178 GYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDEST 237
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ I+ V + GFG +N+ + +ALID+Y KCG ++ A +F G
Sbjct: 238 MVTVLSACAQSASIELGRQVHSWIDDHGFG--SNLKIVNALIDLYIKCGEVETASGLFEG 295
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC+H+G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GVS + ++D+ + G +E A ++ + M + + W A++
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGF 414
Query: 355 QIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
+H NP + +EPD I ++ L + + +GM D
Sbjct: 415 AMHGRANPAFDIFSRMRKDGIEPDDI-TFVGLLSACSHSGMLD 456
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 313/553 (56%), Gaps = 52/553 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ +N WT +I Y + ++ L M R+ + P +T S++ ++C + D
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V + + CG + E E DV + LI
Sbjct: 178 VRM----------------------------LHCG-------IIKEGLESDVFVRSALID 202
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+A G+ E A +F+E+ D + W +++ G+ QN++ A+E F+RM+ AG + T
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC L +++ A ++++ +AL+DMY KCGS++DA R+F
Sbjct: 263 LTSVLRACTGLALLELGMQ----AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+R+V ++S+MI G A +G + A++LF M + TKPN +T +GVL ACSH GL
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG+ P +HY CM+DLLG+AG L++A+K++ +M EP+ W LLGAC+
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ RN +A+ AA + L+P+ G Y +LSNIYA++ WD V +R ++ G+KK PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++ IH F GD +HP E+ + L L+ RL GY P VL D+ E+ +
Sbjct: 499 SWIEVNKQ-IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLALAFGL+T +RI KNLRIC DCH+F AS++ R IV+RD +R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYH 617
Query: 536 HFQDGKCSCGNYW 548
HFQDGKCSCG+YW
Sbjct: 618 HFQDGKCSCGDYW 630
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 335/575 (58%), Gaps = 36/575 (6%)
Query: 1 MDSFPRLVFEQV--KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL 58
+ S R +F+++ +K+ +TALIR H D++ Y MR+ + L
Sbjct: 64 LPSHARKLFDRIPHSHKDSVDYTALIRC----SHPLDALRFYLQMRQRALPLDGVALICA 119
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
AC+++ D +L Q+H + G F V N ++ YVKCG +G +R+VF+E+ E
Sbjct: 120 LGACSKLGDSNLVPQMHVGVVKFG-FLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPS 178
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VVSWT ++ +ES +F+E+P +++VAWT ++ GYV + +EA + M +
Sbjct: 179 VVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVF 238
Query: 179 A---GVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSK 234
G + +TL V+SAC+Q G + WV C + G+ V+VG++L+DMY+K
Sbjct: 239 GCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDL--GVMVGTSLVDMYAK 296
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG I A +F M +RNV ++++M+ G AMHG +++F MV+ E KP+ VTF+ +
Sbjct: 297 CGRISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACMVE-EVKPDAVTFMAL 355
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L++CSH GL + YG+ P +HYACMVDLLGRAG LEEA +V+K+P+ P
Sbjct: 356 LSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPP 415
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
N V G+LLGAC H + + L +++P +I+LSN+YA G D + +R+
Sbjct: 416 NEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRK 475
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
+LK G++K PG S + D G +H F AGD +HP + +I L D++ +L+ GY PN
Sbjct: 476 VLKNRGIRKVPGMSSIYVD-GQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVPNTN 534
Query: 463 -SVLYDVSD--------EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHL 513
VL+ S+ EE +++L THSEKLAL FGL++T + + I KNLRIC+DCH
Sbjct: 535 CQVLFGCSNGDDCMEAFEEVEQVLFTHSEKLALCFGLMSTPSSSPLCIFKNLRICQDCHS 594
Query: 514 FMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ AS + REIVVRD RFH F+ G CSC +YW
Sbjct: 595 AIKIASDIYKREIVVRDRYRFHSFKQGSCSCSDYW 629
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 153/384 (39%), Gaps = 86/384 (22%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGG-FTSDLYVGNTMIGMYVKCGFLGCSRKV 110
+ +L + C V G+Q+HA + G F+ ++ N ++ +Y C +RK+
Sbjct: 12 ALIFRSLLRQCARASAVRPGEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKL 71
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FD +P KD V +TA+ ++ + P +A+
Sbjct: 72 FDRIPHSH-----------------------------KDSVDYTAL----IRCSHPLDAL 98
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG-SGFGPINNVVVGSALI 229
++ +M+ + D V L+ + AC++LG +N V ++ G FG + + V + ++
Sbjct: 99 RFYLQMRQRALPLDGVALICALGACSKLG---DSNLVPQMHVGVVKFGFLRHTKVLNGVM 155
Query: 230 DMYSKCGSIDDAYRIFV-------------------------------GMKQRNVFSYSS 258
D Y KCG + +A R+F M +RN +++
Sbjct: 156 DGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTV 215
Query: 259 MILGFAMHGRAHAAIQLFGDMV---KTETKPNGVTFIGVLTACSHVG-------LKCYGV 308
+I G+ G A L +MV N +T VL+ACS G + CY V
Sbjct: 216 LIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAV 275
Query: 309 SPSTDHYACM-----VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEI 362
M VD+ + G + AL + MP N W A+L +H +
Sbjct: 276 KAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMP-RRNVVAWNAMLCGLAMHGMGKVV 334
Query: 363 AQIAANHLFELEPDKIGNYIILSN 386
++ A + E++PD + +LS+
Sbjct: 335 VEMFACMVEEVKPDAVTFMALLSS 358
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/570 (40%), Positives = 328/570 (57%), Gaps = 34/570 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---- 63
VFE++K K+ W A++ GY G D++ L+ +R E I T SA+
Sbjct: 307 VFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 366
Query: 64 --EVLDVS-----LGQQIHAQTI--LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
E LDV G + + T+ LL G S G + G C + + +
Sbjct: 367 GFEALDVFRQMLLCGSEPNVVTLVSLLSGCAS---AGTLLHGKETHCHAIKWILNLDEND 423
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEY 172
P D++ LI Y+ ++A +F+ +P KD+ V WT ++ G Q+ + EA+E
Sbjct: 424 PGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALEL 483
Query: 173 FERMQYAG--VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F +M V + T+ + ACA+LG +++ + + F + V + LID
Sbjct: 484 FSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM-LFVANCLID 542
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSK G +D A +F M QRN S++S++ G+ MHGR A+Q+F +M K P+GVT
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVT 602
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ VL ACSH G+ K +GV P +HYACMVDLL RAG L+EA++++ M
Sbjct: 603 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P++P VW ALL AC+++ N E+ + AAN L ELE G+Y +LSNIYA+A W DV+
Sbjct: 663 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 722
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
R+R L+K TG+KK PG SW++G +G F AGD +HP S +I L DL+ R++A GY
Sbjct: 723 RIRYLMKNTGIKKRPGCSWVQGRKGTA-TFFAGDWSHPMSQQIYDLLRDLMQRIKALGYV 781
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P+ R L+DV DEEK +L HSEKLALA+G+LTT+PGA +RI KNLR C DCH
Sbjct: 782 PDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYI 841
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S +I EI+VRD+ RFHHF++G CSC YW
Sbjct: 842 SIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 209/417 (50%), Gaps = 47/417 (11%)
Query: 6 RLVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKA 61
R VF++++ + + W +++ Y+ G ++ ++ M + GI P + +L + A
Sbjct: 200 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 259
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C V S G+Q+H L G D++VGN ++ MY KCG + + KVF+ M +DVVS
Sbjct: 260 CASVGAWSRGKQVHGYA-LRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS 318
Query: 122 WTELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
W ++ Y+ G + A GLF ++ + + V W+A++ GY Q EA++ F +M
Sbjct: 319 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQML 378
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYA--------NWVCEIAEGSGFGPINNVVVGSALI 229
G E + VTLV ++S CA G + + W+ + E P ++++V +ALI
Sbjct: 379 LCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEND---PGDDLMVINALI 435
Query: 230 DMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET--K 285
DMYSKC S A +F + K R+V +++ +I G A HG A+ A++LF M++ +
Sbjct: 436 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 495
Query: 286 PNGVTFIGVLTACSHVGLKCYGV------------SPSTDHYACMVDLLGRAGCLEEALK 333
PN T L AC+ +G +G S C++D+ ++G ++ A
Sbjct: 496 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 555
Query: 334 MVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFELE-----PDKIGNYIIL 384
+ + M + NG W +L+ +H R E QI +E++ PD + ++L
Sbjct: 556 VFDNMH-QRNGVSWTSLMTGYGMHGRGEEALQI----FYEMQKVXLVPDGVTFVVVL 607
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 38/290 (13%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F W LIR + G L+D + LY M+R G P +T + KAC E+ G +HA
Sbjct: 111 FWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA- 169
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVVSWTELIVAYANNGD 134
+ GF +++VGN ++ MY +CG +R+VFDEM ER D+VSW ++ AY GD
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 229
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYVTLVGVIS 193
A++ FERM + G+ D V+LV V+
Sbjct: 230 -------------------------------SIRAMKMFERMTEDLGIRPDAVSLVNVLP 258
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
ACA +G V A SG +V VG+A++DMY+KCG +++A ++F MK ++V
Sbjct: 259 ACASVGAWSRGKQVHGYALRSGL--FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDV 316
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
S+++M+ G++ GR A+ LF + + + + N VT+ V+ + GL
Sbjct: 317 VSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 366
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 324/553 (58%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ W A+I GY G+ K+++ L+ M + + P T+ + AC +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H I GF S+L + N +I +Y KCG
Sbjct: 282 IELGRQVHLW-IDDHGFGSNLKIVNALIDLYSKCG------------------------- 315
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E+A GLF LP KD ++W ++ GY +EA+ F+ M +G + VT
Sbjct: 316 ------ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++ ACA LG I W+ + G N + ++LIDMY+KCG I+ A+++F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +++ S+++MI GFAMHGRA A+ LF M K +P+ +TF+G+L+ACSH G+
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y ++P +HY CM+DLLG +G +EA +M+ M +EP+G +W +LL AC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+ + A +L ++EP+ G+Y++LSNIYASAG W++V++ R LL G+KK PG
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E K+
Sbjct: 610 SSIEID-SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++T PG + I+KNLR+C +CH S++ REI+ RD RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 220/407 (54%), Gaps = 28/407 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ N +W + RG+ L ++ LY M G+ P S+T + K+C +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQIH + LG DLYV ++I MYV+ G L + KVFD+ P RDVVS+T LI
Sbjct: 150 FKEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G +E+A LF+E+P+KD V+W AM++GY + +EA+E F+ M V D T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+SACAQ G I+ V + GFG +N+ + +ALID+YSKCG ++ A +F
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFG--SNLKIVNALIDLYSKCGELETACGLFER 326
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC+H+G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ GV+ ++ ++D+ + G +E A ++ + + + W A++
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGF 445
Query: 355 QIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWD 395
+H + A+ LF ++PD I ++ L + + +GM D
Sbjct: 446 AMHGRAD----ASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLD 487
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 329/553 (59%), Gaps = 28/553 (5%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W ++ G+ G+ K+++ ++ + G P T+S++ + + +++G+ IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
I G D V + MI MY K G + +F++ + I + NG +
Sbjct: 276 GYVIK-QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 136 ESA---GGLFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ A LF E ++ + V+WT+++ G QN K EA+E F MQ AGV+ ++VT+ +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGP----INNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ AC + + + GF ++NV VGSALIDMY+KCG I+ + +F
Sbjct: 395 LPACGNIAALGHGR------STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +N+ ++S++ GF+MHG+A + +F +++T KP+ ++F +L+AC VGL
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY+CMV+LLGRAG L+EA ++++MP EP+ VWGALL +C+
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ N ++A+IAA LF LEP+ G Y++LSNIYA+ GMW +V +R ++ GLKKNPG
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ + ++ AGD +HP +I + + ++ ++ G++PNL L+DV ++E+++
Sbjct: 629 SWIQV-KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQ 687
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+ FGLL T G ++++KNLRIC DCH + S GREI +RD RFH
Sbjct: 688 MLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG++W
Sbjct: 748 HFKDGICSCGDFW 760
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LV + + + +++LI SI ++ M G+ P S L LFK C E+
Sbjct: 71 LVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS 130
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+G+QIH + + G D +V +M MY++CG +G +RKVFD M ++DVV+ + L+
Sbjct: 131 AFKVGKQIHCVSCV-SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 127 VAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
AYA G +E + +E+ + V+W +++G+ ++ +EA+ F+++ + G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS----- 237
D VT+ V+ + ++ + G + + V SA+IDMY K G
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL--LKDKCVISAMIDMYGKSGHVYGII 307
Query: 238 --------------------------IDDAYRIFVGMKQR----NVFSYSSMILGFAMHG 267
+D A +F K++ NV S++S+I G A +G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA----------- 316
+ A++LF +M KPN VT +L AC ++ +G ST +A
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG--RSTHGFAVRVHLLDNVHV 425
Query: 317 --CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHL-FE 372
++D+ + G + + + MP + N W +L+ +H + E+ I + +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 373 LEPDKIGNYIILS 385
L+PD I +LS
Sbjct: 485 LKPDFISFTSLLS 497
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+LI +Y+N A + +P ++++++ + ++I F RM G+
Sbjct: 54 AKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLI 113
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D L + CA+L K + ++ SG + V ++ MY +CG + DA
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD--MDAFVQGSMFHMYMRCGRMGDAR 171
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M ++V + S+++ +A G +++ +M + + N V++ G+L+ + G
Sbjct: 172 KVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ ++VF + KN W +L+ G+ + G K+ +S++ S+ R + P + ++L AC
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVS 121
+V G + G L + M+ + + G L + + EMP E D
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 122 WTELIVA--YANNGDME--SAGGLFNELP 146
W L+ + NN D+ +A LF+ P
Sbjct: 560 WGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 321/572 (56%), Gaps = 63/572 (11%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+FE ++ +N L W+A+I GY +G ++++ + M +G P S T+ +L AC
Sbjct: 347 LFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACA 406
Query: 64 EVLDVSLGQQIHAQTI---LLG--------GFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
+ +S G +IHA ++ LL G DL V N +I MY KC +R +FD
Sbjct: 407 SLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFD 466
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P R+ ++ V WT M+ GY Q +A++
Sbjct: 467 SIPRRE-----------------------------RNVVTWTVMIGGYAQYGDSNDALKI 497
Query: 173 FERM---QYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSAL 228
F M YA Y T+ ++ ACA L ++ + + + P + V + L
Sbjct: 498 FSEMISKPYAVAPNAY-TISCILMACAHLAALRMGKQIHAYVTRHHEYEP-SVYFVANCL 555
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
IDMYSKCG +D A +F M +RN S++SM+ G+ MHGR A+ +F M K P+
Sbjct: 556 IDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDD 615
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
++F+ +L ACSH G+ + Y V S +HYAC++DLL R G L++A K ++
Sbjct: 616 ISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQ 675
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
+MP+EP+ +W ALL AC++H N E+A+ A N L ++ + G+Y ++SNIYA+A W D
Sbjct: 676 EMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKD 735
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
V+R+R+L+K +G+KK PG SW++G +G F GD +HP S EI L L+ R++ G
Sbjct: 736 VARIRQLMKKSGIKKRPGCSWVQGKKGTA-SFFVGDRSHPLSPEIYSLLERLIGRIKVMG 794
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMC 516
Y P L+DV DEEK +L HSEKLALA+GLLTTSPG +RI KNLR+C DCH
Sbjct: 795 YVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFT 854
Query: 517 GASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EI+VRD+ RFHHF++G CSCG YW
Sbjct: 855 YISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 199/392 (50%), Gaps = 44/392 (11%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----RREGIGPVSFTLSA-- 57
LVF+++ K + W +++ ++ + + ++ L+ M + S +S
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ AC + + ++IH+ I G F +D +V N +I Y KCG + + KVF+ M +
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTF-ADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK 323
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPREAIEY 172
DVVSW ++ Y +G+ +A LF + PL D + W+A++ GY Q +EA++
Sbjct: 324 DVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL-DVITWSAVIAGYAQRGCSQEALDA 382
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIA---EGSGFGPINNV 222
F++M G E + VT++ ++SACA LG + Y+ C ++ + G G ++
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442
Query: 223 VVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+V +ALIDMYSKC S A IF + ++RNV +++ MI G+A +G ++ A+++F +M+
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502
Query: 281 KTE--TKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYA-CMVDLLGRA 325
PN T +L AC+H+ + + PS A C++D+ +
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G ++ A + + MP + N W +++ +H
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMH 593
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 164/359 (45%), Gaps = 70/359 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
V E+V W L+R +I +GHL +I + C M R G P FTL KAC E+
Sbjct: 105 VLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPS 164
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVVSWTE 124
G+ +H I GF S+++V N ++ MY +CG L + VFDE+ + DV+SW
Sbjct: 165 YCCGRALHG-LICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNS 223
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM------QY 178
++ A +V+ + PR A+E F M +
Sbjct: 224 IVAA-------------------------------HVKGSNPRTALELFSEMSMIVHEKA 252
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+D +++V ++ ACA L + + A + G + V +ALID Y+KCGS+
Sbjct: 253 TNERSDIISIVNILPACASLKALPQIKEIHSYAIRN--GTFADAFVCNALIDTYAKCGSM 310
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+DA ++F M+ ++V S+++M+ G+ G AA +LF +M K + +T+ V+
Sbjct: 311 NDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG- 369
Query: 299 SHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV---EPNGGVWGALLGAC 354
YA + GC +EAL ++M + EPN +LL AC
Sbjct: 370 ----------------YA-------QRGCSQEALDAFQQMILDGSEPNSVTIISLLSAC 405
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N WT+++ GY + G K+++ ++ M++ G P + L AC+
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
Query: 66 LDVSLGQQIHAQTILLGGF----TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVV 120
V G ++ I+ + +++ Y +I + +CG L + K EMP E V
Sbjct: 629 GMVDQG--LNYFDIMRRDYDVVASAEHYA--CVIDLLARCGRLDKAWKTIQEMPMEPSAV 684
Query: 121 SWTELIVAYANNGDMESAGGLFNEL---PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
W L+ A + ++E A N+L ++ ++T + Y + ++ + M+
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744
Query: 178 YAGVE 182
+G++
Sbjct: 745 KSGIK 749
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 324/557 (58%), Gaps = 50/557 (8%)
Query: 6 RLVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE + + WTA++ Y G +++ ++ MR+ + P L ++ A T
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFT 233
Query: 64 EVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D+ G+ IHA + +G T DL + ++ MY KCG
Sbjct: 234 CLQDLEQGRSIHASVMKMGLETEPDLLI--SLNTMYAKCG-------------------- 271
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ +A LF+++ + + W AM++GY +N ++AI+ F M V
Sbjct: 272 -----------QVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVR 320
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +++ ISACAQ+G ++ A W+ E S + ++V + SALIDM++KCGS++ A
Sbjct: 321 PDTISITSAISACAQVGSLEQARWMDEYVSRSDYR--DDVFISSALIDMFAKCGSVECAR 378
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F R+V +S+MI+G+ +HG+A AI L+ M + PN VTF+G+L AC+H G
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSG 438
Query: 303 LKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ G ++P HYAC++DLLGRAG L++A ++++ MPV+P VWGALL
Sbjct: 439 MVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+ HR+ E+ + AA LF ++P G+Y+ LSN+YA+A +WD V+ VR +K GL K
Sbjct: 499 SACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+ G SW+E RG + FR GD +HP EI++ + + RL+ G+ N + L+D++DE
Sbjct: 559 DVGCSWVEV-RGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDE 617
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E + L +HSE++ +A+GL++T G T+RI KNLR C +CH S+++GREIVVRD
Sbjct: 618 EAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDT 677
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 678 NRFHHFKDGVCSCGDYW 694
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 183/370 (49%), Gaps = 52/370 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+F R VF+ + F W A+IRGY H +D++ +Y M+ + P SFT L KAC
Sbjct: 70 TFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKAC 129
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVV 120
+ + +G+ +HAQ L GF +D++V N +I +Y KC LGC+R VF+ +PER +V
Sbjct: 130 GGLSHLQMGRFVHAQVFRL-GFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIV 188
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT ++ AYA NG+ P EA+E F +M+
Sbjct: 189 SWTAIVSAYAQNGE-------------------------------PVEALEIFSQMRKMD 217
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ D V LV V++A L ++ + G ++++ +L MY+KCG +
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI--SLNTMYAKCGQVAT 275
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F MK N+ +++MI G+A +G A AI LF +M+ + +P+ ++ ++AC+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335
Query: 301 VGLKCYGVSPSTDHY-------------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
VG + D Y + ++D+ + G +E A + ++ ++ + VW
Sbjct: 336 VG--SLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT-LDRDVVVW 392
Query: 348 GALLGACQIH 357
A++ +H
Sbjct: 393 SAMIVGYGLH 402
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+LI A ++ GD+ A +F++LP W A++ GY +N ++A+ + +MQ A V
Sbjct: 57 TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T ++ AC L ++ +V GF +V V + LI +Y+KC + A
Sbjct: 117 PDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEA--DVFVQNGLIALYAKCRRLGCAR 174
Query: 243 RIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
+F G + +R + S+++++ +A +G A+++F M K + KP+ V + VL A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC 234
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
H + G+ D + + + G + A + +KM PN +W A
Sbjct: 235 LQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 350 LLG 352
++
Sbjct: 294 MIS 296
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 320/555 (57%), Gaps = 18/555 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKACTEVL 66
+F++ ++ +++++L+ + ++ L C + + + P F +S++ +
Sbjct: 142 LFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVASVFARLR 201
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+Q+HA ++ + D V ++++ MY KCG RKVFD M ++ V WT L+
Sbjct: 202 SRRLGRQLHAH-FVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALV 260
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA+NG E A LF +P ++ AWTA+++G V + A+E F M+ GV D
Sbjct: 261 SGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDA 320
Query: 187 TLVG-VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ VI A L + GF ++N++VG+ALIDMYSKC I A +F
Sbjct: 321 FVLSIVIGGSADLAAFVLGRQLHGSTMRLGF--LSNMIVGNALIDMYSKCSDILSAREVF 378
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
G+ R+V S+++M++G A HGRA A+ L+ MV KPN VTF+G++ ACSH GL
Sbjct: 379 EGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQ 438
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG++P HY C +DLL R+G L EA +++ MP EP+ WGALL A
Sbjct: 439 KGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSA 498
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +++ E+ ++ L EL P YI+LSN+YA G WD V++VR+ + ++K P
Sbjct: 499 CTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEP 558
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E R F AG++ EI L +++ ++ GY P+ SV++D+ + EK
Sbjct: 559 GYSWIEAGRE-FRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEK 617
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSE+LA+AFGL+ + PG+ +R++KNLR+C DCH M S++ R+IVVRD+ R
Sbjct: 618 EHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSR 677
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ GKCSC +W
Sbjct: 678 FHHFEGGKCSCSEFW 692
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 65/275 (23%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCS----------------------- 42
R VF+ + KN +WTAL+ GY G ++++ L+ S
Sbjct: 242 RKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESV 301
Query: 43 --------MRREGIG-PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
MRR+G+ +F LS + ++ LG+Q+H T+ L GF S++ VGN
Sbjct: 302 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRL-GFLSNMIVGNA 360
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+I MY KC + +R+VF+ + RDV+SWT ++V A +G E
Sbjct: 361 LIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAE----------------- 403
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
EA+ ++RM AG + + VT VG+I AC+ G+++ + E +
Sbjct: 404 --------------EALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKN 449
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+G + + +D+ S+ G + +A + M
Sbjct: 450 E-YGITPRLQHYTCYLDLLSRSGHLLEAEELMTTM 483
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVET 183
L+ AYA + + A LF+E P +D +++++T +A P A+ M A +
Sbjct: 126 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 185
Query: 184 DYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D+ + V S A +LG +A++V G + VV S+L+DMY KCGS
Sbjct: 186 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNG-------DDVVKSSLVDMYCKCGSP 238
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
DD ++F M +N +++++ G+A +GR+ A+QLF M
Sbjct: 239 DDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSM 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + +++ WT ++ G G +++++LY M G P T L AC+
Sbjct: 375 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 434
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G+Q+ G T L + + + G L + ++ MP E D +W
Sbjct: 435 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 494
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAK 165
L+ A D E + + EL KD + + Y N K
Sbjct: 495 LLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGK 538
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 314/557 (56%), Gaps = 26/557 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + + + + L+ + G + + ++ +M + + +S L K
Sbjct: 61 RRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKN---- 116
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
G A+ + + N M+ G +G + +F PE+ D + WT
Sbjct: 117 -----GAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTA 171
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVET 183
++ Y + G+++ A F +P+++ V+W A+V GYV+N++ +A+ F+ M + A V+
Sbjct: 172 MVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQP 231
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL V+ C+ L + + V + G ++ VG++L+ MY KCG +DDA +
Sbjct: 232 NPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG--RSITVGTSLLSMYCKCGDLDDACK 289
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +++ ++++MI G+A HG AI+LF M P+ +T + VLTAC H GL
Sbjct: 290 LFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGL 349
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P DHY+CMVDLL RAG LE A+ M+ MP EP+ +G LL
Sbjct: 350 CDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLL 409
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++++N E A+ AA L E +P G Y+ L+NIYA A WDDVSRVRR +K + K
Sbjct: 410 TACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVK 469
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E +GV HEFR+ D HP I L L ++A GY P+L L+DV +
Sbjct: 470 TPGYSWME-IKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEES 528
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K ++LM HSEKLA+AFGL++TSPG T+RI KNLRIC DCH S++ REI++RD
Sbjct: 529 LKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDT 588
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 589 TRFHHFRGGHCSCGDYW 605
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 31/284 (10%)
Query: 92 NTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
N ++ Y K G L +R++FD +P D VS+ L+ + GD++ A +F+ +P++
Sbjct: 42 NCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR 101
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
D +W MV+G +N AIE E M A + V+ +++A A G + A +
Sbjct: 102 DVTSWNTMVSGLSKNG----AIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLF 157
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
A + ++ +A++ Y G++ A F M RN+ S+++++ G+ + R
Sbjct: 158 RNAPEK-----TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSR 212
Query: 269 AHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRA-- 325
A A+++F MV+ +PN T VL CS++ +G H CM LGR+
Sbjct: 213 AGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQV---HQWCMKLPLGRSIT 269
Query: 326 ------------GCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G L++A K+ ++M + + W A++ H
Sbjct: 270 VGTSLLSMYCKCGDLDDACKLFDEMHTK-DIVAWNAMISGYAQH 312
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/623 (35%), Positives = 329/623 (52%), Gaps = 84/623 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKACTE 64
R VF+++ K+ LW +I GY +SI ++ + E + + TL + A E
Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 233
Query: 65 VLDVSLGQQIHA---------QTILLGGFTS---------------------DLYVGNTM 94
+ ++ LG QIH+ +L GF S D+ N M
Sbjct: 234 LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAM 293
Query: 95 IGMYVKCGFLGCSRKVFDEM-------PERDVVSW------------------------- 122
I Y G S +F E+ +VS
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSH 353
Query: 123 ----TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
T L Y+ ++ESA LF+E P K +W AM++GY QN +AI F MQ
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + VT+ ++SACAQLG + WV ++ + F +++ V +ALI MY+KCGSI
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMYAKCGSI 471
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A R+F M ++N ++++MI G+ +HG+ A+ +F +M+ + P VTF+ VL AC
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL YG PS HYACMVD+LGRAG L+ AL+ +E M +EP V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LLGAC+IH++ +A+ + LFEL+PD +G +++LSNI+++ + + VR+ K
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 407 TGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L K PGY+ +E G+ H F +GD +HP EI + L L +++ GYQP L
Sbjct: 652 RKLAKAPGYTLIEIGE--TPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV +EE++ ++ HSE+LA+AFGL+ T PG +RI+KNLR+C DCH S++ R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERV 769
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF+DG CSCG+YW
Sbjct: 770 IVVRDANRFHHFKDGVCSCGDYW 792
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 163/360 (45%), Gaps = 47/360 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
+ R +F V+ + FL+ L+RG+ + S+S++ +R+ + P S T + A
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D G+ IH Q ++ G S+L +G+ ++ MY K + +RKVFD MPE+D + W
Sbjct: 130 SGFRDDRAGRVIHGQAVV-DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGV 181
M++GY +N E+I+ F + + +
Sbjct: 189 -------------------------------NTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D TL+ ++ A A+L ++ + +A +G + V+ G I +YSKCG I
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG--FISLYSKCGKIKMG 275
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++ ++ +Y++MI G+ +G ++ LF +++ + + T + ++ H+
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 302 GLKCYGV------SPSTDHYA---CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
L Y + S H + + + + +E A K+ ++ P E + W A++
Sbjct: 336 ML-IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMIS 393
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSG----FGPINNVVVGSALIDMYSKCGSIDDAY 242
T +IS L K + + +A+ G N++ + + L S G+I A
Sbjct: 13 TTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYAR 72
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACS 299
IF+ +++ +VF ++ ++ GF+++ H+++ +F + K T+ KPN T+ ++A S
Sbjct: 73 DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 315/562 (56%), Gaps = 49/562 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-----RREGIGPVSFTLSALFKAC 62
+F + FL+ LI H D I L S+ + + P SFT +LFKAC
Sbjct: 58 IFNHIPNPTLFLYNTLISSLT---HHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKAC 114
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G +HA + D +V N+++ Y K G L SR +FD++ E D+ +W
Sbjct: 115 ASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATW 174
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ AYA + S F + + EA+ F MQ + ++
Sbjct: 175 NTMLAAYAQSASHVSYSTSFEDADMS------------------LEALHLFCDMQLSQIK 216
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCGSI 238
+ VTLV +ISAC+ LG + W G+ NN+ VG+AL+DMYSKCG +
Sbjct: 217 PNEVTLVALISACSNLGALSQGAW------AHGYVLRNNLKLNRFVGTALVDMYSKCGCL 270
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ A ++F + R+ F Y++MI GFA+HG + A++L+ +M + P+G T + + AC
Sbjct: 271 NLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFAC 330
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL +G+ P +HY C++DLLGRAG L+EA + ++ MP++PN +
Sbjct: 331 SHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAIL 390
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W +LLGA ++H N E+ + A HL ELEP+ GNY++LSN+YAS G W+DV RVR L+K
Sbjct: 391 WRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKD 450
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+ K PG+S +E + G +HEF GD HP S EI +G++ RL G++P VL+
Sbjct: 451 HGVDKLPGFSLVEIN-GAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLF 509
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +E+K+ L HSE+LA+AF L+ +S +RI+KNLR+C DCH S R+I
Sbjct: 510 DVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDI 569
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD RFHHF+DG CSC +YW
Sbjct: 570 IVRDRNRFHHFKDGSCSCLDYW 591
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/553 (38%), Positives = 315/553 (56%), Gaps = 64/553 (11%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
KN WTA+I G + G +++L+ MRREG+ P FT SA+ V ++
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVF----VSEM 415
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA+ ++ + VG ++ YVK G + KVF E+I A
Sbjct: 416 HAE-VIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF------------EIIEA------ 456
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
KD +AW+AM+ GY Q + EA + F ++ G++ + T VI+A
Sbjct: 457 -------------KDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINA 503
Query: 195 CAQLGVIKYANWVCEIAEGSGFGP------INNVV-VGSALIDMYSKCGSIDDAYRIFVG 247
CA +G F +NN + V SAL+ MY+K G+ID A+ +F
Sbjct: 504 CASP--------TAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
K+R++ S++SMI G++ HG+A A+++F +M K + VTFIGV+TAC+H GL G
Sbjct: 556 QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKG 615
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
++P+ HY+CM+DL RAG LE+A+ ++ +MP P VW LLGA +
Sbjct: 616 QKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAAR 675
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+HRN E+ ++AA L L+P+ Y++LSN+YA+AG W + + VR+L+ +KK PGY
Sbjct: 676 VHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGY 735
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + + F AGDLTHP S +I L +L RL+ GYQP+ ++V +D+ DE+K+
Sbjct: 736 SWIEV-KNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKET 794
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL HSE+LA+AFGL+ T P ++I+KNLR+C DCH F S V R IVVRD+ RFH
Sbjct: 795 ILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFH 854
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 855 HFKDGLCSCGDYW 867
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 35/292 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +N WT+L+ GY G L+C M+ EG+ P +T+S + A
Sbjct: 148 RRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNE 207
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V +G Q+HA ++ GF + V N++I +Y + G L +R V
Sbjct: 208 GVVGIGLQVHAM-VVKHGFEEAIPVFNSLISLYSRLGMLRDARDV--------------- 251
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+++ ++D V W +M+ GYV+N + E E F +MQ AGV+ +
Sbjct: 252 ----------------FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTH 295
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T VI +CA L + + A SGF + +V +AL+ SKC +DDA +F
Sbjct: 296 MTFASVIKSCASLRELALVKLMQCKALKSGF--TTDQIVITALMVALSKCKEMDDALSLF 353
Query: 246 VGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
M++ +NV S+++MI G +G A+ LF M + KPN T+ +LT
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 155/343 (45%), Gaps = 45/343 (13%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
L+ Y K++++L+ S+ + P TLS +F C LD LG+Q+H Q + G
Sbjct: 64 LLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFG 123
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
+ VG +++ MY+K + R+VFDEM ER+V
Sbjct: 124 -LVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNV----------------------- 159
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
V+WT+++ GY N E F +MQY GV + T+ VI+A GV+
Sbjct: 160 --------VSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVG 211
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
V + GF + V ++LI +YS+ G + DA +F M+ R+ +++SMI G
Sbjct: 212 IGLQVHAMVVKHGFEEA--IPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAG 269
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSP--STD 313
+ +G+ ++F M KP +TF V+ +C+ + ++C + +TD
Sbjct: 270 YVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTD 329
Query: 314 HYACMVDLLGRAGC--LEEALKMVEKMPVEPNGGVWGALLGAC 354
++ + C +++AL + M N W A++ C
Sbjct: 330 QIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 138 AGGLFNELPLKDKV--AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A LF+++P + ++ Y ++ + +EA+ F + ++ ++ D TL V + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 196 AQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A K V C+ + FG +++V VG++L+DMY K +++D R+F M +RNV
Sbjct: 104 AGSLDGKLGRQVHCQCVK---FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVV 160
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKC---- 305
S++S++ G++ +G +LF M PN T V+ A + +GL+
Sbjct: 161 SWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMV 220
Query: 306 --YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G + + ++ L R G L +A + +KM + + W +++
Sbjct: 221 VKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIA 268
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++ K ++ W ++I GY G K ++ ++ M++ + + T + ACT
Sbjct: 552 VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGL 611
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
V GQ+ I + + MI +Y + G L + + +EMP
Sbjct: 612 VEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 334/562 (59%), Gaps = 21/562 (3%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGH-LKDSISLYCSMRRE-GIGPVSFTLSALFK 60
++ +F+Q+ + F++ +I+ + + H DSI+++ S+ R+ G P ++ F
Sbjct: 227 TYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFG 286
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + V G+Q+ + +G +++V N +IGM+ K G + +R VFD +RD
Sbjct: 287 ACGNGMCVREGEQVFTHAVKVG-LDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFY 345
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +I AY +G+M A LF+E+ +D V+W+ ++ GYVQ EA+++F +M +
Sbjct: 346 SWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE 405
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ + T+V ++AC+ L + W+ +N+ ++ S LIDMY+KCG ID
Sbjct: 406 VKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNI-KMNDRLLAS-LIDMYAKCGEIDS 463
Query: 241 AYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A +F K +R V+ +++MI GFAMHG+ AI +F M + PN VTFI +L ACS
Sbjct: 464 ASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACS 523
Query: 300 H------------VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H + YG++P +HY CMVDLL R+G L+++ +M+ MP+ P+ +W
Sbjct: 524 HGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIW 583
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM- 406
GALL AC+I+++ E + E++P+ IG ++L NIY+++G W++ VR ++
Sbjct: 584 GALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEIN 643
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+ KK PG+S +E + GV HEF GD +HP S EI L +++ +L+ GY P L VL
Sbjct: 644 SDRKKIPGFSSIELN-GVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLL 702
Query: 467 DVSDEEKKRI-LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D DEE K L HSEKLA+AFGL+ T+PG +RI+KNLR+C DCH S+V R
Sbjct: 703 DFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRV 762
Query: 526 IVVRDNMRFHHFQDGKCSCGNY 547
I+VRD MR+HHF+DG CSC +Y
Sbjct: 763 IIVRDRMRYHHFKDGICSCKDY 784
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 325/554 (58%), Gaps = 24/554 (4%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ WT L+ + G L +S+ L+ MRR+ + +L LF C ++ D+ G+Q
Sbjct: 74 KDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQG 133
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + +G F + + V N ++ MY KCGF+ +++F + E+ VVSWT ++
Sbjct: 134 HGVAVKMG-FLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEG 192
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVIS 193
++ +F+E+P ++ VAWT MV GY+ RE +E M + G ++VTL ++S
Sbjct: 193 LKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 194 ACAQLGVIKYANWVCEIAEGSGF-----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
ACAQ G + WV A + V+VG+AL+DMY+KCG+ID + ++F M
Sbjct: 253 ACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLM 312
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG------ 302
++RNV +++++ G AMHG+ I +F +MV+ E KP+ +TF +L+ACSH+G
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVR-EVKPDDLTFTALLSACSHLGMVDEGW 371
Query: 303 -----LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
L+ YG+ P DHYACMVD+LGRAG +EEA ++ +MPV PN V G+LLG+C +H
Sbjct: 372 RCFHSLQFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
EIA+ L ++ P I++SN+Y + G D +R L+ G++K PG S
Sbjct: 432 GKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSS 491
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD---EEKK 474
+ + V H F +GD +HP + E+ L ++++R+++ GY P++ S L S+ EEK+
Sbjct: 492 IYVNDSV-HRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDI-SGLVSPSEGDLEEKE 549
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L HSEKLA+ FGLL T P + + KNLRIC DCH M S+V REI++RD RF
Sbjct: 550 QALCCHSEKLAVCFGLLETKPRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRF 609
Query: 535 HHFQDGKCSCGNYW 548
H F+ G CSC +YW
Sbjct: 610 HQFKGGSCSCSDYW 623
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 57/335 (17%)
Query: 129 YANNGDMESAGGLFNELPL--KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA++G++ +A LF+E+PL KD V WT +++ + + +++ F M+ VE D+V
Sbjct: 53 YASSGEIATAQKLFDEIPLSDKDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHV 112
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+LV + CA+L +++ +A GF + +V V +AL+DMY KCG + + RIF
Sbjct: 113 SLVCLFGVCAKLEDLRFGEQGHGVAVKMGF--LTSVKVCNALMDMYGKCGFVSEVKRIFQ 170
Query: 247 G-------------------------------MKQRNVFSYSSMILGFAMHGRAHAAIQL 275
M +RNV +++ M+ G+ G ++L
Sbjct: 171 ALEEKSVVSWTVVLDTLVKWEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLEL 230
Query: 276 FGDMV-KTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHY------A 316
+MV + N VT +L+AC+ G LK + + Y
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGT 290
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFELEP 375
+VD+ + G ++ ++K+ M + N W AL +H + + + + E++P
Sbjct: 291 ALVDMYAKCGNIDSSIKVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKP 349
Query: 376 DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
D + + L + + GM D+ R L+ GL+
Sbjct: 350 DDL-TFTALLSACSHLGMVDEGWRCFHSLQFYGLE 383
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
R VF+++ +N WT ++ GY+ G ++ + L M R G G TL ++ AC +
Sbjct: 197 REVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 65 VLDVSLGQQIHA----QTILLGGFTS--DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
++ +G+ +H + +++G + + VG ++ MY KCG + S KVF M +R+
Sbjct: 257 SGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKRN 316
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLK---DKVAWTAMVTGYVQNAKPREAIEYFER 175
VV+W L A +G +F E+ + D + +TA+++ E F
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPDDLTFTALLSACSHLGMVDEGWRCFHS 376
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+Q+ G+E ++ + G I+ A EI P N VV+GS L+ S
Sbjct: 377 LQFYGLEPKVDHYACMVDILGRAGRIEEA----EILMREMPVPPNEVVLGS-LLGSCSVH 431
Query: 236 GSIDDAYRI 244
G ++ A RI
Sbjct: 432 GKLEIAERI 440
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 313/538 (58%), Gaps = 18/538 (3%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACTEVLDVSLGQQIH 75
F ++IR + + S Y + G G P ++T++ L +ACT + G Q+H
Sbjct: 80 FALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVH 139
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
TI G F +D +V +I +Y + G L KVF+ + D V T ++ A A GD+
Sbjct: 140 GMTIRRG-FDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDV 198
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
A LF +P KD +AW AM++GY Q + REA+ F MQ GV+ + V+++ V+SAC
Sbjct: 199 AFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSAC 258
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
QLG + W E + V +G+ L+D+Y+KCG +D A +F GM+++NV++
Sbjct: 259 TQLGALDQGRWAHSYIERNKIKI--TVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYT 316
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------ 303
+SS + G AM+G ++LF M + PN VTF+ VL CS VG
Sbjct: 317 WSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMR 376
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+G+ P DHY C+VDL RAG LE+A+ ++++MP++ + VW +LL A ++++N E+
Sbjct: 377 NEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELG 436
Query: 364 QIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRG 423
+A+ + ELE G Y++LSNIYA + WD+VS VR+ +K G++K PG S +E + G
Sbjct: 437 VLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVN-G 495
Query: 424 VIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEK 483
+HEF GD +HP EI D+ RL+ GY+ + V++D+ +EEK+ L HSEK
Sbjct: 496 EVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEK 555
Query: 484 LALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
A+AFG+++ +RI+KNLR+C DCH S++ REI+VRD RFHHF+DG+
Sbjct: 556 AAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGR 613
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 274/438 (62%), Gaps = 18/438 (4%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y GD+ S+ LF +L +K+ V+W M+ ++QN E + YF ++ G++ D
Sbjct: 678 LMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPD 737
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T + V+ C +GV++ + + + GF N + +AL+D+Y+K G ++D+ +
Sbjct: 738 QATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNA--NTCITTALLDLYAKLGRLEDSSTV 795
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F+ + + ++++M+ +A HG AI+ F MV P+ VTF +L ACSH GL
Sbjct: 796 FLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLV 855
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K Y + P DHY+CMVDL+GR+G L++A ++++MP+EP+ GVWGALLG
Sbjct: 856 EEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 915
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+++++ ++ AA LFELEP NYI+LSNIY+++G+W D SR+R L+K GL +
Sbjct: 916 ACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRA 975
Query: 413 PGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSD 470
GYS++E G++ IH+F GD +HP S +IQ+ L ++ +++++ G++ VL+DV +
Sbjct: 976 SGYSYIEHGNK--IHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDE 1033
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+ K+ ++ HSEK+A+AFGLL SP + I KNLRIC DCH S + R I++RD
Sbjct: 1034 DVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRD 1093
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF +G CSC +YW
Sbjct: 1094 SKRFHHFLEGSCSCRDYW 1111
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 34/287 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+F R +FE + K+P W A+I GY G +++++L+ M+ EG+ ++ ++ AC
Sbjct: 199 AFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSAC 258
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T++ + G+ H+ I + +G T++ +Y KCG + + +VF M E++V +W
Sbjct: 259 TQLGALDQGRWAHSY-IERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTW 317
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ + A NG F E LK F M+ GV
Sbjct: 318 SSALNGLAMNG--------FGEKCLK-----------------------LFSLMKQDGVT 346
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VT V V+ C+ +G + + FG + L+D+Y++ G ++DA
Sbjct: 347 PNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNE-FGIEPQLDHYGCLVDLYARAGRLEDAV 405
Query: 243 RIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
I M + + +SS++ M+ + M++ ET +G
Sbjct: 406 SIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHG 452
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE + KN W +I ++ G ++ ++ + R G+ P T A+ + C ++
Sbjct: 694 LFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGV 753
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V L Q IH I+ GF ++ + ++ +Y K G L
Sbjct: 754 VRLSQGIHG-LIMFCGFNANTCITTALLDLYAKLGRL----------------------- 789
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E + +F E+ D +AWTAM+ Y + R+AI++FE M + G+ D+VT
Sbjct: 790 --------EDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVT 841
Query: 188 LVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+++AC+ G+++ + E +++ P + S ++D+ + G + DAY +
Sbjct: 842 FTHLLNACSHSGLVEEGRYYFETMSKRYRIEP--RLDHYSCMVDLMGRSGLLQDAYGLIK 899
Query: 247 GM 248
M
Sbjct: 900 EM 901
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 168 EAIEYFERMQYA--GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
+ E RM + G + VT + +ISAC G VC G + V V
Sbjct: 618 KCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGG--NKEEGVCIHGLVMKSGVLEEVKVV 675
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+AL+++Y K G + + ++F + +N+ S+++MI+ +G A + F K
Sbjct: 676 NALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLK 735
Query: 286 PNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
P+ TF+ VL C +G + G + +T ++DL + G LE++ +
Sbjct: 736 PDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTV 795
Query: 335 VEKMPVEPNGGVWGALLGACQIH 357
++ P+ W A+L A H
Sbjct: 796 FLEI-TSPDSMAWTAMLAAYATH 817
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 311/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ K W ALI G G + +++LY M G+ P FT+ +L A +
Sbjct: 293 VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKS 352
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++H +L G D ++G +++ +Y+ CG +R +FD M E
Sbjct: 353 LRYGKEVHG-FVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE----------- 400
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
K V+W AM++GY QN P +A+ F ++ G + +
Sbjct: 401 --------------------KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIA 440
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V V+ AC+Q ++ A + + +V V + IDMY+K G I ++ +F G
Sbjct: 441 VVSVLGACSQQSALRLGKETHCYALKALL--MEDVFVACSTIDMYAKSGCIKESRSVFDG 498
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+K +++ S++++I + +HG +I+LF M K P+G TFIG+LT CSH GL
Sbjct: 499 LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEG 558
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+G+ P +HYAC++D+LGRAG L++AL++V +MP +P+ VW +LL C+
Sbjct: 559 LKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCR 618
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
EI QI A L ELEP + NY+ LSN+YA +G WDDV RVR+++K GL+K+ G
Sbjct: 619 NFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGC 678
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E G +H F AGD P S E+ L ++ GY+PN +VL+DV +E+K
Sbjct: 679 SWIELG-GKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIE 737
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+ FGLL T+ G T+RI KNLRIC DCH S+V GREI++RDN RFH
Sbjct: 738 KLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFH 797
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 798 HFKDGLCSCGDYW 810
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 168/368 (45%), Gaps = 47/368 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
+++F++ KN W +I G +G++ ++ +L+ M+ +E I T+ + AC E
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLE 248
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + +++H +I GF D V N + Y KCG L C+ +VF M + V S
Sbjct: 249 ISQLRSLKELHGYSIR-HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS--- 304
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
W A++ G QN PR+A+ + +M Y+G+ D
Sbjct: 305 ----------------------------WNALIGGCAQNGDPRKALNLYIQMTYSGLVPD 336
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ T+ ++ A A L ++Y V G + +G +L+ +Y CG A +
Sbjct: 337 WFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEI--DSFIGISLLSLYIHCGESSSARLL 394
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F GM++++ S+++MI G++ +G A+ LF +V +P+ + + VL ACS
Sbjct: 395 FDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSAL 454
Query: 303 -----LKCYGVSP---STDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
CY + AC +D+ ++GC++E+ + + + + W A++ A
Sbjct: 455 RLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAA 513
Query: 354 CQIHRNPE 361
+H + E
Sbjct: 514 YGVHGDGE 521
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 51/327 (15%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
+FT + KACT LD LG+ IH I +G D++VGN +I MY K GF+ + KVF
Sbjct: 31 NFTFPCVIKACTGSLDRGLGEVIHGMVIKMG-LLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
MP R++VSW +I ++ NG + + E+ ++
Sbjct: 90 HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEE--------------------- 128
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
G+ D TLV V+ CA+ ++ + +A G +V V ++L+DM
Sbjct: 129 --------GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLS--EDVRVNNSLVDM 178
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVT 290
YSKCG + +A +F ++N S+++MI G G A LF +M ++ + + N VT
Sbjct: 179 YSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVT 238
Query: 291 FIGVLTACSHVG-------LKCYGVSPSTDH-------YACMVDLLGRAGCLEEALKMVE 336
+ +L AC + L Y + + + G C E +E
Sbjct: 239 VLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSME 298
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIA 363
V W AL+G C + +P A
Sbjct: 299 TKTVNS----WNALIGGCAQNGDPRKA 321
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 35/302 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACTEV 65
VF + +N W ++I G+ G KD + M EG+ P TL + C
Sbjct: 88 VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+DV +G +IH + LG + D+ V N+++ MY KCG+L ++ +FD+ ++ VSW +
Sbjct: 148 VDVQMGIRIHGLAVKLG-LSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G + A LF E+ +++ +E +
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQED------------------------------IEVNE 236
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT++ ++ AC ++ ++ + + GF + +V + + Y+KCG + A R+F
Sbjct: 237 VTVLNILPACLEISQLRSLKELHGYSIRHGFQ--YDELVANGFVAAYAKCGMLICAERVF 294
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M+ + V S++++I G A +G A+ L+ M + P+ T +L A +H+
Sbjct: 295 YSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLR 354
Query: 306 YG 307
YG
Sbjct: 355 YG 356
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 41/265 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S RL+F+ ++ K+ W A+I GY G +D++ L+ + +G P + ++ AC
Sbjct: 389 SSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGAC 448
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG++ H L D++V + I MY K G + SR VFD + +D+ SW
Sbjct: 449 SQQSALRLGKETHCYA-LKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASW 507
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I AY +GD E E+IE FERM+ G
Sbjct: 508 NAIIAAYGVHGDGE-------------------------------ESIELFERMRKVGQM 536
Query: 183 TDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D T +G+++ C+ G++ KY N E+ G P + + ++DM + G +
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFN---EMQNFHGIEP--KLEHYACVMDMLGRAGRL 591
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGF 263
DDA R+ M ++ S +L F
Sbjct: 592 DDALRLVHEMPEQPDSRVWSSLLSF 616
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 316/550 (57%), Gaps = 52/550 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ +N WT +I Y + ++ L M R+G+ P +T S++ +AC + D
Sbjct: 70 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSD 129
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V + +H I+ G SD+YV + +I ++ K
Sbjct: 130 VRM---LHC-GIIKEGLESDVYVRSALIDVFAKL-------------------------- 159
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G+ E A +F+E+ D + W +++ G+ QN++ A+E F+RM+ AG + T
Sbjct: 160 -----GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 214
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC L +++ A ++++ +AL+DMY KCGS++DA R+F
Sbjct: 215 LTSVLRACTGLALLELGMQ----AHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQ 270
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+R+V ++S+MI G A +G + A++LF M + TKPN +T +GVL ACSH GL
Sbjct: 271 MKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDG 330
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG++P +HY CM+DLLG+AG L++A+K++ +M EP+ W LLGAC+
Sbjct: 331 WYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 390
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ RN +A+ AA + L+P+ G Y +LSNIYA++ WD V +R+ ++ G+KK PG
Sbjct: 391 VQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGC 450
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++ IH F GD +HP E+ + L L+ RL GY P VL D+ E+ +
Sbjct: 451 SWIEVNKQ-IHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMED 509
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLALAFGL+T +RI KNLRIC DCH+F AS++ R IV+RD +R+H
Sbjct: 510 SLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYH 569
Query: 536 HFQDGKCSCG 545
HFQDGKCSCG
Sbjct: 570 HFQDGKCSCG 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF Q+K ++ W+ +I G G+ ++++ L+ M+ G P T+ + AC+
Sbjct: 265 RRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHA 324
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ G L G MI + K G L + K+ +EM E D V+W
Sbjct: 325 GLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 384
Query: 125 LIVAYANNGDM---ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A +M E A L +D +T + Y + K E +RM+ G+
Sbjct: 385 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGI 444
Query: 182 ETD 184
+ +
Sbjct: 445 KKE 447
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 311/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N W A+I G K ++SL+ M G P FTL ++ + C +
Sbjct: 150 LFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRS 209
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQ++HA +L GF VG+++ MY+K G L K+ M
Sbjct: 210 LLAGQEVHA-CLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSM------------- 255
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
P++ VAW ++ G QN P E + + M+ AG D +T
Sbjct: 256 ------------------PIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 297
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V V+SAC++L + + AE G + + V S+LI MYS+ G ++D+ + FV
Sbjct: 298 FVSVLSACSELATLGQGQQIH--AEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVD 355
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
+ +V +SSMI + HGR A++LF M + + N VTF+ +L ACSH GLK
Sbjct: 356 RENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 415
Query: 305 ---------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
Y + P +HY C+VDLLGRAG LEEA M+ MPV+P+G +W LL AC+
Sbjct: 416 TEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACK 475
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+ E+A+ + + +L+P +Y++LSNI+ASA W +VS++R+ ++ ++K PG
Sbjct: 476 LHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGI 535
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SWLE + ++H+F GD +HP EI L +L+ L+ GY P L SVL+D+ +EEK+
Sbjct: 536 SWLEL-KNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEY 594
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEK A+AF L+ TS +R+MKNLR+C+DCH + S++ REI+VRD RFH
Sbjct: 595 NLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFH 654
Query: 536 HFQDGKCSCGNYW 548
HF+DG+CSCGNYW
Sbjct: 655 HFKDGECSCGNYW 667
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
S L ++C ++ + G+Q+H+ I GG + D ++ N ++ Y K G S +F M
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGG-SKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P R+V+S+ LI Y GD+ESA LF+E+ ++ W AM+ G Q ++A+ F+
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFK 183
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M G D TL V+ CA L + V GF + VVGS+L MY K
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFEL--SSVVGSSLAHMYIK 241
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
GS+ D ++ M R V +++++I G A +G + + M +P+ +TF+ V
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 301
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALK-MVEKMPVEP 342
L+ACS H + G S + ++ + R+GCLE+++K V++ +
Sbjct: 302 LSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDV 361
Query: 343 NGGVWGALLGACQIHRNPEIA 363
+W +++ A H E A
Sbjct: 362 --VLWSSMIAAYGFHGRGEEA 380
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/552 (40%), Positives = 319/552 (57%), Gaps = 51/552 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF+++ FLW L +GY+ +S+ LY MR G+ P FT + KA +
Sbjct: 61 YARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAIS 120
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + G +HA +L GF +C LG + T
Sbjct: 121 QLGVLPCGVSLHAH-VLKNGF---------------EC--LG--------------IVAT 148
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
EL++ Y G++ SA LF + +KD VAW A + VQ A+EYF +M V+
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D T+V ++SAC QLG + + + A N++V +A +DM+ KCGS + A
Sbjct: 209 DSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIEC--NIIVENARLDMHLKCGSTEAARV 266
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F MKQRNV S+S+MI+G+AM+G + A+ LF M +PN VTF+GVL+ACSH GL
Sbjct: 267 LFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 304 KCYG--------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G + P +HYACMVDLLGR+G LEEA + ++KM VEP+ G+WGA
Sbjct: 327 VNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGA 386
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNY-IILSNIYASAGMWDDVSRVRRLLKMTG 408
LLGAC +HR+ + Q A+ L E PD IG+Y ++LSNIYA+AG WD V +VR ++ G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KK YS +E D G IH F GD++HP S I + L ++L +++ GY P+ SV +DV
Sbjct: 446 TKKVAAYSSVEFD-GKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVFHDV 504
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
EEK+ L HSEKLA+AFGL+ G +R+MKNLR C+DCH+F S++ REI++
Sbjct: 505 EMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSREIIM 564
Query: 529 RDNMRFHHFQDG 540
RD RFHHF++G
Sbjct: 565 RDKNRFHHFRNG 576
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 39/251 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +FE ++ K+ W A I + G+ ++ + M + + SFT+ ++ AC
Sbjct: 161 SSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + +G++I+ + ++ V N + M++KCG +R +FD+M +R+VVSW
Sbjct: 221 GQLGSLDIGEEIYDRA-RKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSW 279
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ +IV YA NGD EA+ F MQ G+
Sbjct: 280 STMIVGYAMNGD-------------------------------SGEALALFTMMQNEGLR 308
Query: 183 TDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+YVT +GV+SAC+ G++ +Y + + + + P + ++D+ + G +
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLND-KNLEPRKEHY--ACMVDLLGRSGLL 365
Query: 239 DDAYRIFVGMK 249
++AY M+
Sbjct: 366 EEAYEFIKKMR 376
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ GDM A +F+E+P W + GYV+N P E++ +++M+ GV
Sbjct: 47 TQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVR 106
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T V+ A +QLGV+ + +GF + +V + L+ MY K G + A
Sbjct: 107 PDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLG--IVATELVMMYMKFGELSSAE 164
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+ +++ ++++ I G + A++ F M + + T + +L+AC +G
Sbjct: 165 FLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 338/621 (54%), Gaps = 84/621 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + + +WT LI Y+ G + L+ M +G P +++S++ ACTE+
Sbjct: 202 VFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGS 261
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF---LGCSRKVFDEMPERDVVSWTE 124
V LGQQ+H+ + LG SD V ++ MY K + +RKVF MP +V+SWT
Sbjct: 262 VRLGQQLHSVALRLG-LVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTA 320
Query: 125 LIVAYANNGDMES-AGGLFNEL--------------------PLKDK------------- 150
LI Y +G E+ LF E+ L D+
Sbjct: 321 LISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKT 380
Query: 151 ------VAWTAMVTGYVQNAKPREAIEYFERMQYAG-------VETDY------------ 185
V A+V+ Y ++ EA + F+++ VET+
Sbjct: 381 SIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGM 440
Query: 186 ------VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
T ++SA A +G++ + ++ +GF ++ + ++L+ MY++CG ++
Sbjct: 441 DDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFR--SDQGISNSLVSMYARCGYLE 498
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA R F MK NV S++S+I G A HG A A+ +F DM+ KPN VT+I VL+ACS
Sbjct: 499 DACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACS 558
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
HVGL K +G+ P +HYAC+VDLL R+G +EEA + + +MP + + VW
Sbjct: 559 HVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVW 618
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LL AC+ + N EI +IAANH+ LEP Y++LSN+YA AG+WD+V+R+R L++
Sbjct: 619 KTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDK 678
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L K G SW++ IHEFRAGD +HP + +I L L+ ++ GY P+ VL+D
Sbjct: 679 NLSKETGLSWMDVG-NTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHD 737
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+S+E K++ L+ HSEK+A+AFGL+TTS +RI KNLR+C DCH + S+ GREI+
Sbjct: 738 MSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREII 797
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD+ RFH +DG CSCG YW
Sbjct: 798 LRDSNRFHRMKDGICSCGEYW 818
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 164/351 (46%), Gaps = 52/351 (14%)
Query: 6 RLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+Q+ ++ WTA+ G ++S+ L M G+ P +FTL A +AC
Sbjct: 96 RRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARAC-- 153
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLY--VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
F +L+ G ++G +K GF G DV
Sbjct: 154 -------------------FPQELFRLAGGVVLGFVLKTGFWGT-----------DVSVG 183
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LI +A NGD+ +A +F+ L + V WT ++T YVQ + +E F M G E
Sbjct: 184 CALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFE 243
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG---SID 239
D ++ +ISAC +LG ++ + +A G +++ V L+DMY+K S++
Sbjct: 244 PDGYSMSSMISACTELGSVRLGQQLHSVA--LRLGLVSDSCVSCGLVDMYAKLKMERSME 301
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F M + NV S++++I G+ G + + + LF +M+ +PN +T+ +L AC
Sbjct: 302 HARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKAC 361
Query: 299 SHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKM 338
+++ + + + S H +V + +GC+EEA K +++
Sbjct: 362 ANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PE 116
L + D+ LG+ +H + + +D V N+++ MY KCG + +R+VFD+M
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
RD+VSW TAM + +N RE++ M
Sbjct: 106 RDLVSW-------------------------------TAMASCLARNGAERESLRLLGEM 134
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKC 235
G+ + TL AC + + A V +GF +V VG ALIDM+++
Sbjct: 135 LELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWG-TDVSVGCALIDMFARN 193
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A R+F G+ +R ++ +I + G A ++LF M+ +P+G + ++
Sbjct: 194 GDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMI 253
Query: 296 TACSHVG 302
+AC+ +G
Sbjct: 254 SACTELG 260
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 314/557 (56%), Gaps = 47/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ + ++ W +I Y +++ ++ MR EG FT+S++ AC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
D +++H ++ +LYVG ++ +Y KCG + + +VF+ M +
Sbjct: 174 VNCDALECKKLHCLSVK-TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD------- 225
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
K V W++MV GYVQN EA+ + R Q +E
Sbjct: 226 ------------------------KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL VI AC+ L + + + SGFG +NV V S+ +DMY+KCGS+ ++Y
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFG--SNVFVASSAVDMYAKCGSLRESYI 319
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
IF ++++N+ ++++I GFA H R + LF M + PN VTF +L+ C H GL
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
YG+SP+ HY+CMVD+LGRAG L EA ++++ +P +P +WG+LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C++++N E+A++AA LFELEP+ GN+++LSNIYA+ W+++++ R+LL+ +KK
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW++ + +H F G+ HP EI L +L+ + + GY+P++ L+DV
Sbjct: 500 VRGKSWID-IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIG 558
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K+ +LM HSEKLAL FGL+ + VRIMKNLRIC DCH FM AS R I+VRD
Sbjct: 559 KKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDV 618
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF DG CSCG++W
Sbjct: 619 NRFHHFSDGHCSCGDFW 635
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 40/333 (12%)
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
C K+ E DV LI AY+ G +E A +F+ + + V+W M+ Y +N
Sbjct: 82 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141
Query: 165 KPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN---- 220
EA++ F M+ G + T+ V+SAC GV C+ E ++
Sbjct: 142 MESEALDIFLEMRNEGFKFSEFTISSVLSAC---GV------NCDALECKKLHCLSVKTC 192
Query: 221 ---NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
N+ VG+AL+D+Y+KCG I DA ++F M+ ++ ++SSM+ G+ + A+ L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 278 DMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAG 326
+ + N T V+ ACS H + G + + VD+ + G
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGN 380
L E+ + ++ E N +W ++ H P+ I LFE + P+++
Sbjct: 313 SLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMI----LFEKMQQDGMHPNEVTF 367
Query: 381 YIILSNIYASAGMWDDVSRVRRLLKMT-GLKKN 412
+LS + G+ ++ R +L++ T GL N
Sbjct: 368 SSLLS-VCGHTGLVEEGRRFFKLMRTTYGLSPN 399
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 310/554 (55%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ WT LI GY D++ L+ M R G P FTLS++ KA
Sbjct: 106 RKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAE 165
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Q+H + G F S+++VG+ ++ +Y + G
Sbjct: 166 RRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL---------------------- 202
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F+ L ++ V+W A++ G+ + +A+E F+ M G +
Sbjct: 203 ---------MDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSH 253
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + AC+ G ++ WV SG + G+ L+DMY+K GSI DA +IF
Sbjct: 254 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIF 311
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R+V S++S++ +A HG + A+ F +M + +PN ++F+ VLTACSH GL
Sbjct: 312 DRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLD 371
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K G+ HY +VDLLGRAG L AL+ +E+MP+EP +W ALL AC
Sbjct: 372 EGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 431
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA H+FEL+PD G ++IL NIYAS G W+D +RVR+ +K +G+KK P
Sbjct: 432 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 491
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + IH F A D HP EI + ++L +++ GY P+ V+ V +E++
Sbjct: 492 CSWVEIE-NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQERE 550
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF LL T PG+T+ I KN+R+C DCH + AS+ +GREI+VRD RF
Sbjct: 551 VNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRF 610
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC +YW
Sbjct: 611 HHFKDGACSCKDYW 624
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 145/313 (46%), Gaps = 46/313 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ L K CT ++ G+ +H ++ F DL + NT++ MY KCG
Sbjct: 55 NTLLKKCTVFKLLTQGRIVHGH-LIQSIFRHDLVMNNTLLNMYAKCG------------- 100
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+E A +F+++P +D V WT +++GY Q+ +P +A+ F +
Sbjct: 101 ------------------SLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQ 142
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M G + TL VI A A + + GF +NV VGSAL+D+Y++
Sbjct: 143 MLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD--SNVHVGSALLDLYTRY 200
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +DDA +F ++ RN S++++I G A A++LF M++ +P+ ++ +
Sbjct: 201 GLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLF 260
Query: 296 TACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACS G + Y + A ++D+ ++G + +A K+ +++ + +
Sbjct: 261 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDV 319
Query: 345 GVWGALLGACQIH 357
W +LL A H
Sbjct: 320 VSWNSLLTAYAQH 332
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 326/561 (58%), Gaps = 24/561 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + ++N W +L Y+ G + ++++ M G+ P T+ ++ AC+++
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH + G D++V N ++ +Y KC + ++ VFD +P R+V SW +
Sbjct: 458 QDLKSGKVIHGFAVR-HGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGI 516
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ AY N + E +F+++ D++ W+ ++ G V+N++ EA+E F +MQ G
Sbjct: 517 LTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGF 576
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+ ++ AC+ ++ + C + + +AL+DMY+KCG +
Sbjct: 577 KPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLART---NALVDMYAKCGGLSL 633
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ +F M ++VFS+++MI MHG A+ LF M+ + KP+ TF VL+ACSH
Sbjct: 634 SRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSH 693
Query: 301 VGLKCYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L GV P +HY C+VD+ RAGCLEEA +++MP+EP W
Sbjct: 694 SMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWK 753
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
A L C++++N E+A+I+A LFE++P+ NY+ L NI +A +W + S++R+L+K G
Sbjct: 754 AFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERG 813
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+ K PG SW G+R +H F AGD ++ S +I L +L +++A GY+P+ VL+D
Sbjct: 814 ITKTPGCSWFHVGNR--VHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHD 871
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EEK L HSEKLA+AFG+L + +T+R+ KNLRIC DCH + S V+G IV
Sbjct: 872 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIV 931
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD++RFHHF++G CSC ++W
Sbjct: 932 VRDSLRFHHFKNGNCSCKDFW 952
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 46/356 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W +L Y+ G + ++++ M + T+S++ C+++
Sbjct: 95 RRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDL 154
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G++IH ++ G D++V + + Y KC + ++ VFD MP RDVV+W L
Sbjct: 155 QDLKSGKEIHG-FVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSL 213
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
Y N G P++ + F M GV+ D
Sbjct: 214 SSCYVNCG-------------------------------FPQKGLNVFREMVLDGVKPDP 242
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ ++SAC+ L +K + A G + NV V +AL+++Y C + +A +F
Sbjct: 243 VTVSCILSACSDLQDLKSGKAIHGFALKHGM--VENVFVSNALVNLYESCLCVREAQAVF 300
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M RNV +++S+ + G + +F +M KP+ + +L ACS +
Sbjct: 301 DLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLK 360
Query: 302 -GLKCYGVSPS----TDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G +G + D + C +V+L C+ EA + + MP N W +L
Sbjct: 361 SGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 164/359 (45%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + +++ W +L Y+ G + ++++ M +G+ P T+S + AC+++
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH L G +++V N ++ +Y C + ++ VFD MP R+V++
Sbjct: 256 QDLKSGKAIHGFA-LKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT---- 310
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W ++ + YV P++ + F M GV+ D
Sbjct: 311 ---------------------------WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + ++ AC+QL +K + A G + +V V +AL+++Y+ C + +A +F
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGM--VEDVFVCTALVNLYANCLCVREAQTVF 401
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M RNV +++S+ + G + +F +MV KP+ VT + +L ACS +
Sbjct: 402 DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLK 461
Query: 302 -GLKCYGVSPS----TDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G +G + D + C ++ L + C+ EA + + +P W +L A
Sbjct: 462 SGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP-HREVASWNGILTA 519
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 141/339 (41%), Gaps = 56/339 (16%)
Query: 28 ILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSD 87
I G ++I +Y S R GI P A+ KAC D +Q H G SD
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCG-VMSD 74
Query: 88 LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPL 147
+ +GN I Y KC + +R+VFD +L
Sbjct: 75 VSIGNAFIHAYGKCKCVEGARRVFD-------------------------------DLVA 103
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
+D V W ++ YV P++ + F +M V+ + +T+ ++ C+ L +K
Sbjct: 104 RDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGK-- 161
Query: 208 CEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGF 263
E GF G + +V V SA ++ Y+KC + +A +F M R+V +++S+ +
Sbjct: 162 ----EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCY 217
Query: 264 AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV------------GLKCYGVSPS 311
G + +F +MV KP+ VT +L+ACS + LK +G+ +
Sbjct: 218 VNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK-HGMVEN 276
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+V+L C+ EA + + MP N W +L
Sbjct: 277 VFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWNSL 314
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 32/158 (20%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF+ + K+ F W +I + G+ K+++SL+ M + P S T + + AC
Sbjct: 632 SLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSAC 691
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + V G QI F SR D + E + +
Sbjct: 692 SHSMLVEEGVQI----------------------------FNSMSR---DHLVEPEAEHY 720
Query: 123 TELIVAYANNGDMESAGGLFNELPLK-DKVAWTAMVTG 159
T ++ Y+ G +E A G +P++ +AW A + G
Sbjct: 721 TCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 323/576 (56%), Gaps = 70/576 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG------------------ 49
VF+++ +N WTA+I Y +G+ +++L+ + + +
Sbjct: 300 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWV 359
Query: 50 ---PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
P FT + + +CT L LG+QIH+ I L + ++VG++++ MY K
Sbjct: 360 CTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLN-YEDHVFVGSSLLDMYAK------ 412
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+G + A +F LP +D V+ TA+++GY Q
Sbjct: 413 -------------------------DGKIHEARTVFECLPERDVVSCTAIISGYAQLGLD 447
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA+E F R+Q G++++YVT GV++A + L + V S VV+ +
Sbjct: 448 EEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSF--VVLQN 505
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETK 285
+LIDMYSKCG++ + RIF M +R V S+++M++G++ HG ++LF M + T+ K
Sbjct: 506 SLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVK 565
Query: 286 PNGVTFIGVLTACSHVGLKCYG-------------VSPSTDHYACMVDLLGRAGCLEEAL 332
P+ VT + VL+ CSH GL+ G V P +HY C+VDLLGR+G +EEA
Sbjct: 566 PDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAF 625
Query: 333 KMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
+ ++KMP EP +WG+LLGAC++H N +I + A L E+EP GNY+ILSN+YASAG
Sbjct: 626 EFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAG 685
Query: 393 MWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRL 452
W+DVS +R L+ + K PG S +E D+ V+H F A D +HP EI + +L
Sbjct: 686 RWEDVSSLRDLMLKKTVTKEPGRSSIELDQ-VLHTFHASDRSHPRREEICMKVKELSTSF 744
Query: 453 QADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
+ GY P+L VL+DV +E+K++IL+ HSEKLAL+FGL+ + +R++KNLRIC DCH
Sbjct: 745 KEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCH 804
Query: 513 LFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
F S+V GRE+ +RD RFH GKCSC +YW
Sbjct: 805 NFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+A+ C GQ++HA I + +++ +I +Y KC LG + VFDEMP
Sbjct: 247 NAILNECVNKRAFREGQRVHAHMIK-TRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-KVAWTAM-VTGYVQNAKPREAIEYF 173
ER+VVSWT +I AY+ G A LF D K++ T + ++ + P
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLF----FADVKISLTGVYAIDKLKLSNPNRP---- 357
Query: 174 ERMQYAGVETDYVTLVGVISAC-AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
+ E + T V+++C + LG I I + ++V VGS+L+DMY
Sbjct: 358 ----WVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIK---LNYEDHVFVGSSLLDMY 410
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+K G I +A +F + +R+V S +++I G+A G A++LF + K N VT+
Sbjct: 411 AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYT 470
Query: 293 GVLTACS 299
GVLTA S
Sbjct: 471 GVLTALS 477
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 55/255 (21%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + ++ TA+I GY G ++++ L+ ++ EG+ T + + A + +
Sbjct: 420 RTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGL 479
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+Q+H +L S + + N++I MY KCG L SR++FD M ER V+SW +
Sbjct: 480 AALDLGKQVHNH-VLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAM 538
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
+V Y+ +G+ RE ++ F M + V+ D
Sbjct: 539 LVGYSKHGE-------------------------------GREVLKLFTLMREETKVKPD 567
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS-----------ALIDMYS 233
VT++ V+S C+ G+ E G N++ G ++D+
Sbjct: 568 SVTILAVLSGCSHGGL-----------EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLG 616
Query: 234 KCGSIDDAYRIFVGM 248
+ G +++A+ M
Sbjct: 617 RSGRVEEAFEFIKKM 631
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 32/151 (21%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+V + + LI +Y+KC S+ DA+ +F M +RNV S+++MI ++ G A A+ LF V
Sbjct: 277 SVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADV 336
Query: 281 KTE---------------------TKPNGVTFIGVLTACSH-----VGLKCYGVSPS--- 311
K T+PN TF VLT+C+ +G + + +
Sbjct: 337 KISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNY 396
Query: 312 TDHY---ACMVDLLGRAGCLEEALKMVEKMP 339
DH + ++D+ + G + EA + E +P
Sbjct: 397 EDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 320/564 (56%), Gaps = 39/564 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
RLVF+ V + +W AL+ GY ++ L+ M E P + T +++ AC
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
S + IH I+ GF D YV N ++ MY + G + S+ +F M +RD+VSW
Sbjct: 650 CKVFSDKEGIHGY-IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNT 708
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I G + A L +E+ + Q + +E + +
Sbjct: 709 MITGCIVCGRYDDALNLLHEMQRR-------------QGEDGSDTFVDYEDDGGVPFKPN 755
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTL+ V+ CA L + + A +V VGSAL+DMY+KCG ++ A R+
Sbjct: 756 SVTLMTVLPGCAALAALGKGKEIHAYAVKQKLA--MDVAVGSALVDMYAKCGCLNLASRV 813
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV------KTETKPNGVTFIGVLTAC 298
F M RNV +++ +I+ + MHG+ A++LF M + +PN VT+I + AC
Sbjct: 814 FDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAAC 873
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-G 345
SH G+ +GV P DHYAC+VDLLGR+G ++EA +++ MP N
Sbjct: 874 SHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVD 933
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
W +LLGAC+IH++ E +IAA HLF LEP+ +Y+++SNIY+SAG+WD VR+ +K
Sbjct: 934 AWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMK 993
Query: 406 MTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
G++K PG SW+E GD +H+F +GD +HP S E+ + L L R++ +GY P++ V
Sbjct: 994 EMGVRKEPGCSWIEHGDE--VHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCV 1051
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L++V DEEK+ +L HSE+LA+AFGLL T PG T+R+ KNLR+C DCH+ S+++ R
Sbjct: 1052 LHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDR 1111
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI++RD RFHHF +G CSCG+YW
Sbjct: 1112 EIILRDVRRFHHFANGTCSCGDYW 1135
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 36/295 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I + S+ L+ M E + P SFTL ++ AC+ V
Sbjct: 387 RQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHV 446
Query: 66 LD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V LG+Q+HA T+ G + Y N ++ MY + G + ++ +F
Sbjct: 447 RGGVRLGKQVHAYTLRNGDLRT--YTNNALVTMYARLGRVNDAKALF------------- 491
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
G+F+ KD V+W +++ QN + EA+ Y M GV D
Sbjct: 492 ---------------GVFDG---KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPD 533
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTL V+ AC+QL ++ + A +G I N VG+AL+DMY C +
Sbjct: 534 GVTLASVLPACSQLERLRIGREIHCYALRNG-DLIENSFVGTALVDMYCNCKQPKKGRLV 592
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTAC 298
F G+ +R V +++++ G+A + A++LF +M+ ++E PN TF VL AC
Sbjct: 593 FDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 36/292 (12%)
Query: 12 VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
V+ ++P W L+R +D+IS Y +M P +F A+ KA V D+ LG
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 72 QQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
+QIHA G S + V N+++ MY KCG L +R+VFD++P+RD VSW +I
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
F E L ++ F M V+ TLV
Sbjct: 410 R----------FEEWEL---------------------SLHLFRLMLSENVDPTSFTLVS 438
Query: 191 VISACAQL-GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
V AC+ + G ++ V +G +AL+ MY++ G ++DA +F
Sbjct: 439 VAHACSHVRGGVRLGKQVHAYTLRNG---DLRTYTNNALVTMYARLGRVNDAKALFGVFD 495
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+++ S++++I + + R A+ M+ +P+GVT VL ACS +
Sbjct: 496 GKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQL 547
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 155/380 (40%), Gaps = 66/380 (17%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ W +I ++++ M +G+ P TL+++ AC+++ + +G++I
Sbjct: 497 KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREI 556
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + G + +VG ++ MY C R VFD + R V W L+ YA N
Sbjct: 557 HCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEF 616
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ A LF E+ + + + NA T V+ A
Sbjct: 617 DDQALRLFVEMISESE---------FCPNA---------------------TTFASVLPA 646
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
C + V + GFG + V +AL+DMYS+ G ++ + IF M +R++
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFG--KDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIV 704
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTET------------------KPNGVTFIGVLT 296
S+++MI G + GR A+ L +M + + KPN VT + VL
Sbjct: 705 SWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764
Query: 297 ACSHVGLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPN 343
C+ L G YA +VD+ + GCL A ++ ++MP+ N
Sbjct: 765 GCA--ALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-N 821
Query: 344 GGVWGALLGACQIHRNPEIA 363
W L+ A +H E A
Sbjct: 822 VITWNVLIMAYGMHGKGEEA 841
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 310/546 (56%), Gaps = 49/546 (8%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+PF ++R + + +++L+ RR P + T L +AC +L + G+ +H
Sbjct: 89 DPFSLNTVLRIFASSARPRVALALH---RRHLAPPDTHTYPPLLQACARLLALRYGEGLH 145
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A+ G S ++V N+++ +Y CG + +VFDE+P
Sbjct: 146 AEACK-NGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPP------------------- 185
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
P ++ V+W +++ G+ N +P E + F M D T+V V++AC
Sbjct: 186 ----------PERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTAC 235
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVF 254
A++GV+ V G + N G+ALID+Y+KCG +DDA ++F M R V
Sbjct: 236 AEIGVLALGRRVHVFVAKVGL--VGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVV 293
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++S+I+G A++G A+QLF M + + P +T +GVL ACSH GL
Sbjct: 294 SWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQM 353
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG++P +H CMVDLLGRAG +EEA + MP+EPN VW LLGAC +H+ EI
Sbjct: 354 KAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEI 413
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ A L EL+P G+Y++LSN+YA G W DV +R+ + G++KNPG+S +E R
Sbjct: 414 GEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVE-LR 472
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
++EF GD +HP + +I + LGD+ +RL+ GY P+ +VL D+ DEEK+ L HSE
Sbjct: 473 NSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSE 532
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
+LA+AF LL + PG +RI+KNLR+C DCH+ + S+V REI+VRD RFHHF+ G C
Sbjct: 533 RLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGAC 592
Query: 543 SCGNYW 548
SC +YW
Sbjct: 593 SCKDYW 598
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
LP D + ++ + +A+PR A+ R D T ++ ACA+L ++Y
Sbjct: 85 LPSPDPFSLNTVLRIFASSARPRVALALHRRHL---APPDTHTYPPLLQACARLLALRYG 141
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILG 262
+ AE G ++ V V ++L+ +Y CG + A+R+F + +RN+ S++S++ G
Sbjct: 142 EGLH--AEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNG 199
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG---------VSPSTD 313
FA +GR + + +F +M++ E P+G T + VLTAC+ +G+ G V +
Sbjct: 200 FAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGN 259
Query: 314 HYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+A ++DL + G +++A KM +M V W +L+
Sbjct: 260 AHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLI 299
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 39/266 (14%)
Query: 8 VFEQVK--YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF+++ +N W +++ G+ G + ++++ M P FT+ ++ AC E+
Sbjct: 179 VFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEI 238
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTE 124
++LG+++H + G + + GN +I +Y KCG + +RK+F EM R VVSWT
Sbjct: 239 GVLALGRRVHVFVAKV-GLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTS 297
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIV A NG F +A++ F M+ +
Sbjct: 298 LIVGLAVNG--------FG-----------------------MDALQLFSMMEREKLMPT 326
Query: 185 YVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T+VGV+ AC+ G++ + ++ G P + ++D+ + G +++A+
Sbjct: 327 EITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITP--RIEHLGCMVDLLGRAGRVEEAHN 384
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGR 268
M + N + +++ AMH +
Sbjct: 385 YITTMPLEPNAVVWRTLLGACAMHKK 410
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 321/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
S+ R +F V + FL+T+LIR S+ Y M + P ++T +++ K+
Sbjct: 61 SYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKS 120
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C +++ + G+ IH +L+ GF SD+YV ++ Y KCG L +RKVFD+M +R VV+
Sbjct: 121 CADLVALRHGRIIHGH-VLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVT 179
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +M++GY QN +EAI F+RM+ GV
Sbjct: 180 -------------------------------WNSMISGYEQNGFAKEAIRLFDRMKEIGV 208
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E + T V V+SACA LG WV E A G+G NVV+G++LI+MY++CG++ A
Sbjct: 209 EPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDL--NVVLGTSLINMYTRCGNVSKA 266
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F MK+RNV ++++MI G+ +G A++LF +M + PN +TF+ VL+AC+H
Sbjct: 267 REVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHA 326
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL + Y + P +H+ C+VD+LGRAG L+EA ++++ EP +W A
Sbjct: 327 GLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTA 386
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N + A H EP +Y+ILSNIYA AG D V VR + L
Sbjct: 387 MLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCL 446
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS ++ DR + F GD +H + EI L L+ + + GY SV++++
Sbjct: 447 KKQVGYSTIDLDRKT-YLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELE 505
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EE++ L HSEKLA+AFGLL TS G +RI+KNLR+CEDCH + S + REI+VR
Sbjct: 506 EEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVR 565
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFHHF++G CSC +YW
Sbjct: 566 DKLRFHHFKNGSCSCLDYW 584
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L Q+HA +++ G+ ++ ++ + G + +R++F +P D +T LI
Sbjct: 25 LKLLHQVHAH-VIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIR 83
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ + F+ + ++ ++ RM + V T
Sbjct: 84 STSK----------FHNFSVY--------------------SLYFYTRMVLSNVAPSNYT 113
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
VI +CA L +++ + +GFG ++V V +AL+ Y KCG + +A ++F
Sbjct: 114 FTSVIKSCADLVALRHGRIIHGHVLVNGFG--SDVYVQTALMSFYGKCGVLCNARKVFDK 171
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---LK 304
M+ R+V +++SMI G+ +G A AI+LF M + +PN TF+ VL+AC+H+G L
Sbjct: 172 MRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILG 231
Query: 305 C----YGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
C Y V D ++++ R G + +A ++ + M E N W A++
Sbjct: 232 CWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVAWTAMIS 286
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 327/560 (58%), Gaps = 26/560 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHL--KDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF+++ +++ W +++ + Q +L K G+ P F SAL KAC +
Sbjct: 60 VFDEMPHRDHIAWASVLTA-LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H I+ + +D V ++++ MY KCG L ++ VFD + ++ +SWT +
Sbjct: 119 GSIDHGRQVHCHFIV-SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-D 184
+ YA +G E A LF LP+K+ +WTA+++G+VQ+ K EA F M+ V+ D
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 237
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L ++ ACA L V + GF + V + +ALIDMY+KC + A I
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLVIALGFD--SCVFISNALIDMYAKCSDVIAAKDI 295
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ R+V S++S+I+G A HG+A A+ L+ DMV KPN VTF+G++ ACSHVG
Sbjct: 296 FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFV 355
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K YG+ PS HY C++DLLGR+G L+EA ++ MP P+ W ALL
Sbjct: 356 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 353 ACQIHRNPEIAQIAANHL---FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
AC+ ++ A+HL F+L+ YI+LSNIYASA +W VS RR L +
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDP--STYILLSNIYASASLWGKVSEARRKLGEMEV 473
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDV 468
+K+PG+S +E R F AG+ +HP +I + L L + ++ +GY P+ +L+D+
Sbjct: 474 RKDPGHSSVEV-RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDM 532
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
++EK+++L HSE+ A+A+GLL PG +RI+KNLR+C DCH+ + S++ REI+V
Sbjct: 533 DEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIV 592
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD R+HHF+ GKCSC ++W
Sbjct: 593 RDATRYHHFKGGKCSCNDFW 612
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ C ++ + +HA + LG + NT++ +Y KCG + +VFDEMP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLG-IVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
++W ++ A N+ L K G +P
Sbjct: 69 HIAWASVLTA-------------LNQANLSGKTLSVFSSVGSSSGLRP------------ 103
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWV-CE--IAEGSGFGPINNVVVGSALIDMYSKC 235
D ++ ACA LG I + V C ++E + N+ VV S+L+DMY+KC
Sbjct: 104 -----DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA-----NDEVVKSSLVDMYAKC 153
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G ++ A +F ++ +N S+++M+ G+A GR A++LF
Sbjct: 154 GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/567 (40%), Positives = 326/567 (57%), Gaps = 28/567 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---- 63
VFE++K K+ W A++ GY G D++ L+ +R E I T SA+
Sbjct: 288 VFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 347
Query: 64 --EVLDVSLGQQI---HAQTILLGGFTSDLYVGNTMI-GMYVKCGFLGCSRKVFDEMPER 117
E LDV ++ + L S + T++ G C + + + P
Sbjct: 348 GFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGD 407
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFER 175
D++ LI Y+ ++A +F+ +P KD+ V WT ++ G Q+ + EA+E F +
Sbjct: 408 DLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQ 467
Query: 176 MQYAG--VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M V + T+ + ACA+LG +++ + + F + V + LIDMYS
Sbjct: 468 MLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM-LFVANCLIDMYS 526
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K G +D A +F M QRN S++S++ G+ MHGR A+Q+F +M K P+GVTF+
Sbjct: 527 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVV 586
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL ACSH G+ K +GV P +HYACMVDLL RAG L+EA++++ MP++
Sbjct: 587 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 646
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P VW ALL AC+++ N E+ + AAN L ELE G+Y +LSNIYA+A W DV+R+R
Sbjct: 647 PTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIR 706
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+K TG+KK PG SW++G +G F AGD +HP S +I L DL+ R++A GY P+
Sbjct: 707 YLMKNTGIKKRPGCSWVQGRKGTA-TFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDN 765
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
R L+DV DEEK +L HSEKLALA+G+LTT+PGA +RI KNLR C DCH S +
Sbjct: 766 RFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISII 825
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
I EI+VRD+ RFHHF++G CSC YW
Sbjct: 826 IEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 210/417 (50%), Gaps = 47/417 (11%)
Query: 6 RLVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKA 61
R VF++++ + + W +++ Y+ G ++ ++ M + GI P + +L + A
Sbjct: 181 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 240
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C V S G+Q+H L G D++VGN ++ MY KCG + + KVF+ M +DVVS
Sbjct: 241 CASVGAWSRGKQVHGYA-LRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVS 299
Query: 122 WTELIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
W ++ Y+ G + A GLF ++ + + V W+A++ GY Q EA++ F +M+
Sbjct: 300 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMR 359
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYA--------NWVCEIAEGSGFGPINNVVVGSALI 229
G E + VTLV ++S CA G + + W+ + E P ++++V +ALI
Sbjct: 360 LCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEND---PGDDLMVINALI 416
Query: 230 DMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET--K 285
DMYSKC S A +F + K R+V +++ +I G A HG A+ A++LF M++ +
Sbjct: 417 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 476
Query: 286 PNGVTFIGVLTACSHVGLKCYGV------------SPSTDHYACMVDLLGRAGCLEEALK 333
PN T L AC+ +G +G S C++D+ ++G ++ A
Sbjct: 477 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 536
Query: 334 MVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHLFELE-----PDKIGNYIIL 384
+ + M + NG W +L+ +H R E QI +E++ PD + ++L
Sbjct: 537 VFDNMH-QRNGVSWTSLMTGYGMHGRGEEALQI----FYEMQKVGLVPDGVTFVVVL 588
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 38/290 (13%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F W LIR + G L+D + LY M+R G P +T + KAC E+ G +HA
Sbjct: 92 FWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA- 150
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVVSWTELIVAYANNGD 134
+ GF +++VGN ++ MY +CG +R+VFDEM ER D+VSW ++ AY GD
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 210
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYVTLVGVIS 193
A++ FERM + G+ D V+LV V+
Sbjct: 211 -------------------------------SIRAMKMFERMTEDLGIRPDAVSLVNVLP 239
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
ACA +G V A SG +V VG+A++DMY+KCG +++A ++F MK ++V
Sbjct: 240 ACASVGAWSRGKQVHGYALRSGL--FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDV 297
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
S+++M+ G++ GR A+ LF + + + + N VT+ V+ + GL
Sbjct: 298 VSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 347
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 307/546 (56%), Gaps = 46/546 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ WTALI G+ +D++ L+ M R G P FTLS+L KA
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSE 202
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+HA L G+ S +YVG+ ++ MY +CG
Sbjct: 203 HGLDPGTQLHA-FCLKYGYQSSVYVGSALVDMYARCGH---------------------- 239
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M++A F+ +P K +V+W A+++G+ + + A+ +MQ + +
Sbjct: 240 ---------MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTH 290
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+SACA +G ++ WV SG I +G+ L+DMY+K GSIDDA R+F
Sbjct: 291 FTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI--AFIGNTLLDMYAKAGSIDDAKRVF 348
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ + +V S+++M+ G A HG + F M++ +PN ++F+ VLTACSH GL
Sbjct: 349 DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLD 408
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y V P HY VDLLGR G L+ A + + +MP+EP VWGALLGAC
Sbjct: 409 EGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA FEL+P G ++LSNIYASAG W DV++VR+++K +G+KK P
Sbjct: 469 RMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPA 528
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP EI+ ++ +++ GY P+ VL V +E++
Sbjct: 529 CSWVEIENAV-HLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQERE 587
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLALAF LL T G+ +RI KN+R+C DCH + S+V+ REI+VRD RF
Sbjct: 588 EKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRF 647
Query: 535 HHFQDG 540
H F+DG
Sbjct: 648 HRFRDG 653
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 45/326 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
++R + P S L K CT + V G+ +HA + + L + N ++ MY KCG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L +R++FDEMP +D+V+WT LI G+ Q
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIA-------------------------------GFSQ 166
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N +PR+A+ F +M G + ++ TL ++ A + + G+ ++V
Sbjct: 167 NNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ--SSV 224
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
VGSAL+DMY++CG +D A F GM ++ S++++I G A G A+ L M +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 283 ETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEA 331
+P T+ VL+AC+ +G + + + A ++D+ +AG +++A
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIH 357
++ +++ V+P+ W +L C H
Sbjct: 345 KRVFDRL-VKPDVVSWNTMLTGCAQH 369
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 323/558 (57%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKAC 62
+ R +F+ + +N W+A+I GY+ +K+++ L+ M ++ + P TL ++ +AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ D+S G+++H I LG D+ +GNT++ MY KCG +
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGXVL-DILLGNTLLSMYAKCGVI------------------ 363
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A F+ + KD V+++A+V+G VQN A+ F MQ +G++
Sbjct: 364 -------------DDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T++GV+ AC+ L +++ C G + ++ +ALIDMYSKCG I A
Sbjct: 411 PDLTTMLGVLPACSHLAALQHG--FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M + ++ S+++MI+G+ +HG A+ LF D++ KP+ +TFI +L++CSH G
Sbjct: 469 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG 528
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + + + P +H CMVD+LGRAG ++EA + MP EP+ +W AL
Sbjct: 529 LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSAL 588
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC+IH+N E+ + + + L P+ GN+++LSNIY++AG WDD + +R K GLK
Sbjct: 589 LSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLK 648
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+E + G++H F GD +H ++I + L +LL ++ GYQ V DV +
Sbjct: 649 KIPGCSWIEIN-GIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEE 707
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++IL+ HSEKLA+AFG+L G + + KNLR+C DCH + + + REI VRD
Sbjct: 708 EEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRD 767
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G C+CG++W
Sbjct: 768 ANRFHHFKNGTCNCGDFW 785
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 160/373 (42%), Gaps = 49/373 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ + LW +IR Y G +I LY SM G+ P +T + KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+L + G +IH+ + G E DV T
Sbjct: 121 GLLAIEDGVEIHSHAKMFG--------------------------------LESDVFVCT 148
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ YA G + A LF+ + +D VAW AM+ G +A++ +MQ G+
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T+VGV+ + + + + F N VVVG+ L+DMY+KC + A +
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD--NGVVVGTGLLDMYAKCQCLLYARK 266
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHV- 301
IF M RN S+S+MI G+ A++LF M+ K P VT VL AC+ +
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 302 ------GLKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV-WGAL 350
L CY G ++ + + G +++A++ + M P V + A+
Sbjct: 327 DLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM--NPKDSVSFSAI 384
Query: 351 LGACQIHRNPEIA 363
+ C + N +A
Sbjct: 385 VSGCVQNGNAAVA 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L +AC + ++ ++IH Q L +D V + + +Y+ C + +R++FDE+P
Sbjct: 14 LLEACIQSKSLTEAKKIH-QHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ W ++I AYA NG + AI+ + M
Sbjct: 73 SVILWNQIIRAYAWNGPFDG-------------------------------AIDLYHSML 101
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ GV + T V+ AC+ G++ + V + FG ++V V +AL+D Y+KCG
Sbjct: 102 HLGVRPNKYTYPFVLKACS--GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGI 159
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ +A R+F M R+V ++++MI G +++G A+QL M + PN T +GVL
Sbjct: 160 LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219
Query: 298 CSHV-------GLKCYGVSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
L Y V S D+ ++D+ + CL A K+ + M V N
Sbjct: 220 VGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVS 278
Query: 347 WGALLG 352
W A++G
Sbjct: 279 WSAMIG 284
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 313/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F +++ K+ A+I G+ G +DS+ L+ + G S T+ L +
Sbjct: 86 RLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYS-- 143
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Y+ N + G VK G + S VS T L
Sbjct: 144 ---PFGHS---------------YLCNCIHGFCVKLGIVSHSS-----------VS-TAL 173
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
Y +M A LF+E K +W AM++G QN AI F+ MQ V +
Sbjct: 174 TTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNP 233
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ ++SACAQ+G + WV + + + F +NV V +ALIDMY+KCGSI A +F
Sbjct: 234 VTVTSILSACAQIGALSLGEWVHSLIKSNRFE--SNVYVSTALIDMYAKCGSITVARELF 291
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++N ++++MI G+ +HG A++LF DM+ + KP G+TF+ VL ACSH GL
Sbjct: 292 DLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVK 351
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G P +HYACMVD+LGRAG L++AL+ ++ MPVEP VWGALLGA
Sbjct: 352 EGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGA 411
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C IH++ +A +A+ LFEL+P+ IG Y+++SNIY+ + + VR++ K L K P
Sbjct: 412 CMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTP 471
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G + +E + V H F +GD +HP S I L L ++ G+Q +VL+D+ +EEK
Sbjct: 472 GCTLIEIGQ-VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEK 530
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+AFGL++T PGA +RI+KNLR+C DCH + S++ R IVVRD R
Sbjct: 531 ELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANR 590
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 591 FHHFKDGLCSCGDYW 605
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 55/351 (15%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS---ALFKACTEVLDVSLGQQIHAQTI 79
+I G++ +DSI ++ M G GP F L+ A+ A E+ ++ LG QI
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVL-GNGP-RFDLTTVIAVLPAVAELQELKLGMQI----- 53
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ + +KCGF V T LI ++ G++E A
Sbjct: 54 ---------------LCLAIKCGFYS------------HVSLLTGLISLFSKCGEVEIAR 86
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF E+ KD ++ AM++G+ N + +++ F+ + +G T+VG+I + G
Sbjct: 87 LLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFG 146
Query: 200 VIKYANWVCEIAEG--SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+++C G G +++ V +AL +Y + + A ++F ++ + S++
Sbjct: 147 ----HSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWN 202
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCY 306
+MI G +G AAI LF M K PN VT +L+AC+ +G +K
Sbjct: 203 AMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSN 262
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ ++D+ + G + A ++ + MP E N W A++ +H
Sbjct: 263 RFESNVYVSTALIDMYAKCGSITVARELFDLMP-EKNEVTWNAMISGYGLH 312
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F++ K W A+I G G +ISL+ +M++ + P T++++ AC
Sbjct: 185 FARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACA 244
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +SLG+ +H+ I F S++YV +I MY KCG + +R++FD MPE++ V+W
Sbjct: 245 QIGALSLGEWVHS-LIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTW- 302
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
AM++GY + +EA++ F M + V+
Sbjct: 303 ------------------------------NAMISGYGLHGHGQEALKLFYDMLSSSVKP 332
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+T + V+ AC+ G++K + + + GF P+ + ++D+ + G + A
Sbjct: 333 TGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHY--ACMVDILGRAGQLKKAL 390
Query: 243 RIFVGM 248
M
Sbjct: 391 EFIKAM 396
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 322/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +F + + FL+ +LI ++S+ Y M I ++T SA+ K+
Sbjct: 69 SYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSS 128
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ S+G+ IH + + G+ D YV ++ Y K G + +RKV
Sbjct: 129 ADLTAFSIGETIHCH-VYICGYGLDAYVQAALVSFYAKSGHVMIARKV------------ 175
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
F+++P K VAW +M++GY QN +EA+E F MQ GV+
Sbjct: 176 -------------------FDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVK 216
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T V ++SACAQ+G I WV E + F NVV+G+AL++MYS+CG++ A
Sbjct: 217 PDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDL--NVVLGTALMNMYSRCGNVSKAR 274
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+++N+ ++++MI G+ MHG AI+LF +M +PN VTF+ VL+AC+H G
Sbjct: 275 EVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAG 334
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM-PVEPNGGVWGA 349
L + YG+ PS +H CMVD+LGRAG L EA + ++ P EP VW A
Sbjct: 335 LVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTA 394
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N ++ A HL +EP+ G+Y++LSNIYA AG D V ++R ++ L
Sbjct: 395 MLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRL 454
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS ++ D V + F GD +HP + +I L +L+ R + GY P SV+++V
Sbjct: 455 KKEVGYSTIDVDHKV-YLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVE 513
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EE++ L HSEKLA+AFGLL T G +RI+KNLR+CEDCH + S + REI VR
Sbjct: 514 EEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVR 573
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFHHF+DG CSC +YW
Sbjct: 574 DRLRFHHFKDGSCSCQDYW 592
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
QQIHA+ I+ G LG +R + ++ L AYA
Sbjct: 36 QQIHARIIITG---------------------LGRTRSLITKL----------LSFAYAA 64
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ LF +P D + +++T + + P+E++ + RM A + + T V
Sbjct: 65 ASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAV 124
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
I + A L + G+G + V +AL+ Y+K G + A ++F M ++
Sbjct: 125 IKSSADLTAFSIGETIHCHVYICGYGL--DAYVQAALVSFYAKSGHVMIARKVFDKMPEK 182
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------- 303
V +++SMI G+ +G A++LF M KP+ TF+ +L+AC+ VG
Sbjct: 183 TVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVH 242
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
C+ ++ ++++ R G + +A ++ + M E N W A++ +H
Sbjct: 243 EYIARNCFDLNVVLG--TALMNMYSRCGNVSKAREVFDSME-EKNIVAWTAMISGYGMH 298
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/554 (36%), Positives = 323/554 (58%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTEVL 66
+F+++ ++ F WTA+I GY+ +++ L+ M+R + FT+S+ A V
Sbjct: 158 LFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVP 217
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +G++IH I+ G SD V + + MY KC
Sbjct: 218 CLRIGKEIHGY-IMRTGLDSDEVVWSALSDMYGKC------------------------- 251
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G +E A +F+++ +D V WTAM+ Y Q+ + +E + F + +G+ +
Sbjct: 252 ------GSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEF 305
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T GV++ACA + V GF P + SAL+ MYSKCG++ A R+F
Sbjct: 306 TFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS--FAASALVHMYSKCGNMVSAERVFK 363
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
Q ++FS++S+I G+A +G+ AI+ F +VK+ T+P+ +TF+GVL+AC+H GL
Sbjct: 364 ETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDK 423
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG++ + DHYAC++DLL R+G +EA ++ KM ++P+ +W +LLG C
Sbjct: 424 GLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGC 483
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N ++AQ AA LFE+EP+ Y+ L+NIYA+AGMW +V+++R+ + G+ K PG
Sbjct: 484 RIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPG 543
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+ R V H F GD +HP S EI + LG L R++ +G+ P+ VL+DV DE+K+
Sbjct: 544 LSWIAIKRDV-HVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKE 602
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L HSEKLA+AFG+++T G +++ KNLR C DCH + S++ R+I+VRD+ RF
Sbjct: 603 QNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRF 662
Query: 535 HHFQDGKCSCGNYW 548
H F+DG CSC +YW
Sbjct: 663 HFFEDGHCSCRDYW 676
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 205/384 (53%), Gaps = 31/384 (8%)
Query: 30 QGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLY 89
Q LK+++ + + + P + S L ++C + + G+++H Q I L GF L+
Sbjct: 52 QNRLKEALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVH-QHIKLSGFVPGLF 106
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
+ N ++ MY KC L S+K+FDEMPERD+ SW LI YA G ++ A LF+++P +D
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD 166
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLGVIKYANWVC 208
+WTAM++GYV++ +P EA+E F M+ + +++ T+ ++A A + ++ +
Sbjct: 167 NFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIH 226
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+G ++ VV SAL DMY KCGSI++A IF M R++ ++++MI + GR
Sbjct: 227 GYIMRTGLD--SDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCY------GVSPSTDHYAC 317
LF D++++ +PN TF GVL AC++ +G K + G P + +
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL---- 373
+V + + G + A ++ ++ P +P+ W +L+ + P+ A FEL
Sbjct: 345 LVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQPD----EAIRYFELLVKS 399
Query: 374 --EPDKIGNYIILSNIYASAGMWD 395
+PD I +LS A AG+ D
Sbjct: 400 GTQPDHITFVGVLSAC-AHAGLVD 422
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 37/300 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ WTA+I Y G K+ L+ + R GI P FT S + AC
Sbjct: 258 RHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQ 317
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+++H + GF + + ++ MY KCG + + +VF E P+ D+ SWT L
Sbjct: 318 TSEELGKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA NG +P EAI YFE + +G + D+
Sbjct: 377 IAGYAQNG-------------------------------QPDEAIRYFELLVKSGTQPDH 405
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+T VGV+SACA G++ K ++ I E +G + + +ID+ ++ G D+A I
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKE--QYGLTHTADHYACIIDLLARSGQFDEAENI 463
Query: 245 FVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
M + + F ++S++ G +HG A + + + E + N T++ + + G+
Sbjct: 464 ISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPE-NPATYVTLANIYATAGM 522
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 324/569 (56%), Gaps = 62/569 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+ + + LW A+I GY H K+++ L+ M G+ S T++ + AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
S + IH ++ G D +V NT++ MY + G + + ++F +M +RD+
Sbjct: 418 SGAFSRKEAIHG-FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL----- 471
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ------- 177
V W M+TGYV + +A+ +MQ
Sbjct: 472 --------------------------VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 178 ----YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
++ + +TL+ ++ +CA L + + A + +V VGSAL+DMY+
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA--TDVAVGSALVDMYA 563
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + + ++F + Q+NV +++ +I+ + MHG AI L M+ KPN VTFI
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
V ACSH G+ YGV PS+DHYAC+VDLLGRAG ++EA +++ MP +
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 342 PN-GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
N G W +LLGA +IH N EI +IAA +L +LEP+ +Y++L+NIY+SAG+WD + V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 401 RRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
RR +K G++K PG SW+E GD +H+F AGD +HP S ++ L L +R++ +GY P
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDE--VHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+ VL++V ++EK+ +L HSEKLA+AFG+L TSPG +R+ KNLR+C DCHL S
Sbjct: 802 DTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFIS 861
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+++ REI++RD RFH F++G CSCG+YW
Sbjct: 862 KIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
++P W L+R + L++++ Y M GI P ++ AL KA ++ D+ LG+QI
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA G + V NT++ +Y KCG G KVFD + ER+ VSW LI + +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E A+E F M VE TLV V++A
Sbjct: 180 WEM-------------------------------ALEAFRCMLDENVEPSSFTLVSVVTA 208
Query: 195 CAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
C+ L + + ++ A G G +N+ ++ + L+ MY K G + + + R++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
++++++ + + A++ +MV +P+ T VL ACSH+ +
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 49/346 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL- 66
VF+++ +N W +LI + ++ + M E + P SFTL ++ AC+ +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 67 --DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +G+Q+HA + G S ++ NT++ MY K G L S+ + RD+V+
Sbjct: 215 PEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--- 269
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
W +++ QN + EA+EY M GVE D
Sbjct: 270 ----------------------------WNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ AC+ L +++ + A +G N VGSAL+DMY C + R+
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG- 302
F GM R + +++MI G++ + A+ LF M ++ N T GV+ AC G
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 303 ------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKM 338
+ + V D ++D+ R G ++ A+++ KM
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 324/569 (56%), Gaps = 62/569 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+ + + LW A+I GY H K+++ L+ M G+ S T++ + AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
S + IH ++ G D +V NT++ MY + G + + ++F +M +RD+
Sbjct: 418 SGAFSRKEAIHG-FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL----- 471
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ------- 177
V W M+TGYV + +A+ +MQ
Sbjct: 472 --------------------------VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 178 ----YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
++ + +TL+ ++ +CA L + + A + +V VGSAL+DMY+
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA--TDVAVGSALVDMYA 563
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + + ++F + Q+NV +++ +I+ + MHG AI L M+ KPN VTFI
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
V ACSH G+ YGV PS+DHYAC+VDLLGRAG ++EA +++ MP +
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 342 PN-GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
N G W +LLGA +IH N EI +IAA +L +LEP+ +Y++L+NIY+SAG+WD + V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 401 RRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
RR +K G++K PG SW+E GD +H+F AGD +HP S ++ L L +R++ +GY P
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDE--VHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+ VL++V ++EK+ +L HSEKLA+AFG+L TSPG +R+ KNLR+C DCHL S
Sbjct: 802 DTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFIS 861
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+++ REI++RD RFH F++G CSCG+YW
Sbjct: 862 KIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
++P W L+R + L++++ Y M GI P ++ AL KA ++ D+ LG+QI
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA G + V NT++ +Y KCG G KVFD + ER+ VSW LI + +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E A+E F M VE TLV V++A
Sbjct: 180 WEM-------------------------------ALEAFRCMLDENVEPSSFTLVSVVTA 208
Query: 195 CAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
C+ L + + ++ A G G +N+ ++ + L+ MY K G + + + R++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
++++++ + + A++ +MV +P+ T VL ACSH+ +
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 49/346 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL- 66
VF+++ +N W +LI + ++ + M E + P SFTL ++ AC+ +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 67 --DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +G+Q+HA + G S ++ NT++ MY K G L S+ + RD+V+
Sbjct: 215 PEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--- 269
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
W +++ QN + EA+EY M GVE D
Sbjct: 270 ----------------------------WNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ AC+ L +++ + A +G N VGSAL+DMY C + R+
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG- 302
F GM R + +++MI G++ + A+ LF M ++ N T GV+ AC G
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 303 ------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKM 338
+ + V D ++D+ R G ++ A+++ KM
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 311/554 (56%), Gaps = 46/554 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ WT LI GY ++I L M R P FT ++L KA
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S+G+Q+HA + + D+YVG+ ++ MY +C
Sbjct: 175 GGCSIGEQMHALAVKYN-WDEDVYVGSALLDMYARCE----------------------- 210
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F+ L K++V+W A++ G+ + A + F MQ G +
Sbjct: 211 --------QMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATH 262
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T + SA A++G ++ WV SG VG+ ++ MY+K GS+ DA ++F
Sbjct: 263 FTYSSMFSAFARIGALEQGRWVHAHLIKSG--QKLTAFVGNTMLGMYAKSGSMVDARKVF 320
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +R++ ++++M+ A +G A+ F ++ K + N +TF+ VLTACSH GL
Sbjct: 321 DRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVK 380
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y V P DHY VDLLGRAG L+EAL V KMP+EP VWGALLGAC
Sbjct: 381 EGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 440
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N ++ Q AA+H+FEL+PD G ++L NIYAS G W+D +RVR+++K TG+KK P
Sbjct: 441 RMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPA 500
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW++ + V H F A D THP S +I + ++ R++ GY PN VL ++++E++
Sbjct: 501 CSWVQIENSV-HMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERE 559
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF L+ GA++RIMKN+RIC DCH S+V REIVVRD RF
Sbjct: 560 TKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRF 619
Query: 535 HHFQDGKCSCGNYW 548
HHF +G CSCG+YW
Sbjct: 620 HHFSEGSCSCGDYW 633
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P ++ AC + +++ + IHA + D ++ N++I MY KCG + +
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAH-LSRSCLAGDAFLLNSLIHMYCKCGAVSDA 114
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
R VFD ++P +D V+WT ++ GY QN P
Sbjct: 115 RHVFD-------------------------------KMPSRDVVSWTYLIAGYAQNYMPA 143
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EAI M A + T ++ A G + +A + +V VGSA
Sbjct: 144 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWD--EDVYVGSA 201
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+DMY++C +D A +F + +N S++++I GFA + F +M +
Sbjct: 202 LLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGAT 261
Query: 288 GVTFIGVLTACSHVG 302
T+ + +A + +G
Sbjct: 262 HFTYSSMFSAFARIG 276
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
+I+ACAQ + A + S + + ++LI MY KCG++ DA +F M
Sbjct: 66 IIAACAQFKNLAGARAIHAHLSRSCLA--GDAFLLNSLIHMYCKCGAVSDARHVFDKMPS 123
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA------CSHVGLK 304
R+V S++ +I G+A + AI L DM++ +PNG TF +L A CS +G +
Sbjct: 124 RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCS-IGEQ 182
Query: 305 CYGVSPS----TDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ ++ D Y + ++D+ R ++ A+ + +++ V N W AL+
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEVSWNALIA 235
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 322/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL FE ++ ++ WT++I G+ G +D+I ++ M+ E + +T ++ AC V
Sbjct: 230 RLFFE-MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGV 288
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+Q+HA I+ + +++V + ++ MY KC
Sbjct: 289 MALQEGKQVHAY-IIRTDYKDNIFVASALVDMYCKCK----------------------- 324
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+++SA +F ++ K+ V+WTAM+ GY QN EA++ F MQ G+E D
Sbjct: 325 --------NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDD 376
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VIS+CA L ++ A SG I+ + V +AL+ +Y KCGSI+D++R+F
Sbjct: 377 FTLGSVISSCANLASLEEGAQFHARALTSGL--ISFITVSNALVTLYGKCGSIEDSHRLF 434
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ ++ ++++++ G+A G+A+ I LF M+ KP+ VTFIGVL+ACS GL
Sbjct: 435 NEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVE 494
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ P DHY CM+DL RAG +EEA + KMP P+ W LL +
Sbjct: 495 KGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSS 554
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ + N +I + AA L EL+P +Y++LS++YA+ G W++V+R+R+ ++ GL+K P
Sbjct: 555 CRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEP 614
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F A D ++P S +I L L ++ +GY P++ SVL+DV D EK
Sbjct: 615 GCSWIKY-KNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEK 673
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++L HSEKLA+AFGLL PG +R++KNLR+C DCH S++ REI+VRD R
Sbjct: 674 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTAR 733
Query: 534 FHHFQDGKCSCGNYW 548
FH F+DG CSCG++W
Sbjct: 734 FHLFKDGTCSCGDFW 748
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 201/393 (51%), Gaps = 19/393 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACTEV 65
+F+ + ++ W +LI GY G + S+ Y M + T S L ++
Sbjct: 97 LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKR 156
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V LG+QIH + G F S ++VG+ ++ MY K G + C+RKVFDE+PE++VV + L
Sbjct: 157 GCVKLGRQIHGHVVKFG-FMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTL 215
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ G +E + LF E+ +D ++WT+M+TG+ QN R+AI+ F M+ ++ D
Sbjct: 216 IMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQ 275
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V++AC + ++ V + + +N+ V SAL+DMY KC +I A +F
Sbjct: 276 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYK--DNIFVASALVDMYCKCKNIKSAEAVF 333
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M +NV S+++M++G+ +G + A++ F DM K +P+ T V+++C+
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
H G+ +V L G+ G +E++ ++ ++ + + W AL+ G
Sbjct: 394 EGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGY 452
Query: 354 CQIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + + L L+PDK+ +LS
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 167/366 (45%), Gaps = 50/366 (13%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
AL K C E + + + +H+ I + + ++ N +I Y K G + + KVFD+MP
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPY-PETFLLNNLISSYAKLGSIPYACKVFDQMPH 72
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
++ SW ++ AY+ G + LF+ +P +D V+W ++++GY ++++ + M
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 177 --QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+ +T ++ ++ G +K + FG ++ V VGS L+DMYSK
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIH--GHVVKFGFMSYVFVGSPLVDMYSK 190
Query: 235 -------------------------------CGSIDDAYRIFVGMKQRNVFSYSSMILGF 263
CG ++D+ R+F M++R+ S++SMI GF
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250
Query: 264 AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY--- 315
+G AI +F +M + + TF VLTAC V G + + TD+
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310
Query: 316 ---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HL 370
+ +VD+ + ++ A + +KM + N W A+L G Q + E + ++
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 371 FELEPD 376
+ +EPD
Sbjct: 370 YGIEPD 375
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 316/553 (57%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + ++ WT++I GY +G S+ L+ M +EGI P FT++ + AC
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ +H I SDL+V N ++ MY KCG +G
Sbjct: 368 LENGKDVH-NYIKENKMQSDLFVSNALMDMYAKCGSMG---------------------- 404
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +F+E+ +KD V+W M+ GY +N+ P EA+ F MQY + + +T
Sbjct: 405 ---------DAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSIT 454
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ ACA L ++ + +GF +V +AL+DMY KCG++ A +F
Sbjct: 455 MACILPACASLAALERGQEIHGHILRNGFSLDRHV--ANALVDMYLKCGALGLARLLFDM 512
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ ++++ S++ MI G+ MHG AI F +M + +P+ V+FI +L ACSH GL G
Sbjct: 513 IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ P ++HYAC+VDLL RAG L +A K ++ MP+EP+ +WGALL C+
Sbjct: 573 WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 632
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
I+ + ++A+ A H+FELEP+ G Y++L+NIYA A W++V ++R + GL+KNPG
Sbjct: 633 IYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGC 692
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E +G +H F GD +HP + +I+ L R++ +G+ P +R L D EK+
Sbjct: 693 SWIE-IKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEM 751
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEK+A+AFG+L+ PG TVR+ KNLR+C DCH S+++ R+I++RD+ RFH
Sbjct: 752 ALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFH 811
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +W
Sbjct: 812 HFKDGSCSCRGHW 824
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 143/268 (53%), Gaps = 21/268 (7%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T ++ + C ++ + G++IH+ I D +G+ ++ MYV CG L R++FD+
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHS-IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161
Query: 114 MPERDVVSWTELIVAYANNGD------------------MESAGGLFNELPLKDKVAWTA 155
+ V W L+ YA G+ +ESA LF+EL +D ++W +
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M++GYV N + ++ FE+M G+ TD T+V V++ C+ G++ + A +
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
FG + + + L+DMYSK G+++ A ++F M +R+V S++SMI G+A G + +++L
Sbjct: 282 FG--KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 339
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGL 303
F +M K P+ T +L AC+ GL
Sbjct: 340 FHEMEKEGISPDIFTITTILHACACTGL 367
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 197/455 (43%), Gaps = 103/455 (22%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI----------------- 48
R +F++V + FLW L+ GY G+ ++S+SL+ MR GI
Sbjct: 156 RRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRD 215
Query: 49 ---------GPVSFTLS-----------------------ALFKACTEVLDVSLGQQIHA 76
G VS LS ++ C+ + LG+ +H
Sbjct: 216 VISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHG 275
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
I F +L + N ++ MY K G L + +VF+ M ER VVSWT +I YA G +
Sbjct: 276 YAI-KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 334
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
+ LF+E M+ G+ D T+ ++ ACA
Sbjct: 335 MSVRLFHE-------------------------------MEKEGISPDIFTITTILHACA 363
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
G+++ V + + +++ V +AL+DMY+KCGS+ DA+ +F M+ +++ S+
Sbjct: 364 CTGLLENGKDVHNYIKENKMQ--SDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSW 421
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKC 305
++MI G++ + + A+ LF +M + +KPN +T +L AC+ H +
Sbjct: 422 NTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILR 480
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
G S +VD+ + G L A + + +P E + W ++ +H A
Sbjct: 481 NGFSLDRHVANALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAGYGMHGYGSEAIA 539
Query: 366 AANHLFE--LEPDKIGNYIILSNIYA--SAGMWDD 396
A N + +EPD++ +S +YA +G+ D+
Sbjct: 540 AFNEMRNSGIEPDEVS---FISILYACSHSGLLDE 571
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 8/187 (4%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
RL+F+ + K+ WT +I GY + G+ ++I+ + MR GI P + ++ AC+
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564
Query: 64 E--VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVV 120
+LD G + S+ Y ++ + + G L + K MP E D
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYA--CIVDLLARAGNLSKAYKFIKMMPIEPDAT 622
Query: 121 SWTELIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
W L+ Y + E EL ++ + + Y + K E + ER+
Sbjct: 623 IWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 682
Query: 178 YAGVETD 184
G+ +
Sbjct: 683 RRGLRKN 689
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 317/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + K W AL+ GY + ++ LY M G+ P FT+ +L AC+ +
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH L G D ++G +++ +Y+ CG ++ +FD M R +VS
Sbjct: 324 KSLHYGEEIHGFA-LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS---- 378
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W M+ GY QN P EAI F +M G++
Sbjct: 379 ---------------------------WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 411
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ V AC+QL ++ + A + ++ V S++IDMY+K G I + RIF
Sbjct: 412 IAIMCVCGACSQLSALRLGKELHCFALKAHL--TEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+++++V S++ +I G+ +HGR A++LF M++ KP+ TF G+L ACSH GL
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + P +HY C+VD+LGRAG +++AL+++E+MP +P+ +W +LL +
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N + + AN L ELEP+K NY+++SN++A +G WDDV RVR +K GL+K+
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E G +H F GD P E+++ L ++ + GY P+ SVL+D+ +E+K
Sbjct: 650 GCSWIEVG-GKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDK 708
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
IL HSEKLA++FGLL T+ G VR+ KNLRIC DCH S+V+ R+IVVRDN R
Sbjct: 709 IGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKR 768
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 769 FHHFRDGICSCGDYW 783
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 50/389 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKA 61
S R+VF++++ KN F W A++ Y +D++S++ + P +FTL + KA
Sbjct: 158 SDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 217
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG-CSRKVFDEMPERDVV 120
C +LD+ LGQ IH + SD++VGN +I MY KCG + ++VFD M + V
Sbjct: 218 CAGLLDLGLGQIIHGMATKMD-LVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVS 276
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S W A++ GY QN+ PR+A++ + +M +G
Sbjct: 277 S-------------------------------WNALLCGYAQNSDPRKALDLYLQMTDSG 305
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D+ T+ ++ AC+++ + Y + A +G + +G +L+ +Y CG
Sbjct: 306 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV--DPFIGISLLSLYICCGKPFA 363
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F GM+ R++ S++ MI G++ +G AI LF M+ +P + + V ACS
Sbjct: 364 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 423
Query: 301 VG-------LKCYGVSP--STDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L C+ + + D + + ++D+ + GC+ + ++ +++ E + W
Sbjct: 424 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNV 482
Query: 350 LLGACQIH-RNPEIAQIAANHL-FELEPD 376
++ IH R E ++ L L+PD
Sbjct: 483 IIAGYGIHGRGKEALELFEKMLRLGLKPD 511
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 35 DSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTM 94
D + L + R E +G L +AC + D+ +G+++H F +D + +
Sbjct: 95 DDVVLDSAQRSEAMG-------VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRI 147
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
I MY CG SR VFD++ +++ W ++ AY N E A +F+EL
Sbjct: 148 ITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI-------- 199
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
V KP D TL VI ACA L + + +A +
Sbjct: 200 -----SVTEHKP-----------------DNFTLPCVIKACAGLLDLGLGQIIHGMA--T 235
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAY-RIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
+++V VG+ALI MY KCG +++A R+F M + V S+++++ G+A + A+
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 295
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
L+ M + P+ T +L ACS + YG
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 28/223 (12%)
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTL--------VGVI-SACAQLGVIKYANWVCEIAE 212
++ +EA+++ +R E+D V L +GV+ AC Q I+ + E+
Sbjct: 79 ESGNLKEALDFLQR------ESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVS 132
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
S N+ V+ + +I MYS CGS D+ +F ++++N+F +++++ + + A
Sbjct: 133 AST-QFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDA 191
Query: 273 IQLFGDMVK-TETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYA------CMVD 320
+ +F +++ TE KP+ T V+ AC+ +G +G++ D + ++
Sbjct: 192 MSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIA 251
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ G+ G +EEA+K V + W ALL + +P A
Sbjct: 252 MYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKA 294
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 328/623 (52%), Gaps = 84/623 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKACTE 64
R VF+++ K+ LW +I GY +SI ++ + E + + TL + A E
Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 233
Query: 65 VLDVSLGQQIHA---------QTILLGGFTS---------------------DLYVGNTM 94
+ ++ LG QIH+ +L GF S D+ N M
Sbjct: 234 LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAM 293
Query: 95 IGMYVKCGFLGCSRKVFDEM-------PERDVVSW------------------------- 122
I Y G S +F E+ +VS
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSH 353
Query: 123 ----TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
T L Y+ ++ESA LF+E P K +W AM++GY QN +AI F MQ
Sbjct: 354 TSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQN 413
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + VT+ ++SACAQLG + WV ++ + F +++ V +ALI MY+KCGSI
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMYAKCGSI 471
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+A R+F M ++N ++++MI G+ +HG A+ +F +M+ + P VTF+ VL AC
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYAC 531
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL YG PS HYAC+VD+LGRAG L+ AL+ +E MP++P V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSV 591
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LLGAC+IH++ +A+ + LFEL+PD +G +++LSNI+++ + + VR+ K
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 407 TGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L K PGY+ +E G+ H F +GD +HP I + L L +++ GYQP L
Sbjct: 652 RKLAKAPGYTLIEIGE--TPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELAL 709
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV +EE++ ++ HSE+LA+AFGL+ T PG +RI+KNLR+C DCH S++ R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERV 769
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF+DG CSCG+YW
Sbjct: 770 IVVRDANRFHHFKDGVCSCGDYW 792
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 164/359 (45%), Gaps = 45/359 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
+ R +F V+ + FL+ L+RG+ + S++++ +R+ + P S T + A
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAA 129
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D G IH Q I+ G S+L +G+ ++ MY K + +RKVFD MPE+D + W
Sbjct: 130 SGFRDDRAGCVIHGQAIV-DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGV 181
M++GY +N E+I+ F + + +
Sbjct: 189 -------------------------------NTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D TL+ ++ A A+L ++ + +A +G + V+ G I +YSKCG I A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG--FISLYSKCGKIKMA 275
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F ++ ++ +Y++MI G+ +G ++ LF +++ + K T + ++ H+
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335
Query: 302 GL--KCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
L +G S ++ + + + + +E A K+ ++ P E + W A++
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMIS 393
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 191 VISACAQLGVIKYANWVCEIAEGSG----FGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+IS L + K + + +A+ G N++ + + L S G+I A IF+
Sbjct: 17 LISKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFL 76
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACS 299
+++ +VF ++ ++ GF+++ H+++ +F + K T+ KPN T+ ++A S
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 324/569 (56%), Gaps = 62/569 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+ + + LW A+I GY H K+++ L+ M G+ S T++ + AC
Sbjct: 271 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 330
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
S + IH ++ G D +V NT++ MY + G + + ++F +M +RD+
Sbjct: 331 SGAFSRKEAIHG-FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL----- 384
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ------- 177
V W M+TGYV + +A+ +MQ
Sbjct: 385 --------------------------VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418
Query: 178 ----YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
++ + +TL+ ++ +CA L + + A + +V VGSAL+DMY+
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA--TDVAVGSALVDMYA 476
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + + ++F + Q+NV +++ +I+ + MHG AI L M+ KPN VTFI
Sbjct: 477 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 536
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
V ACSH G+ YGV PS+DHYAC+VDLLGRAG ++EA +++ MP +
Sbjct: 537 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 596
Query: 342 PN-GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
N G W +LLGA +IH N EI +IAA +L +LEP+ +Y++L+NIY+SAG+WD + V
Sbjct: 597 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 656
Query: 401 RRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
RR +K G++K PG SW+E GD +H+F AGD +HP S ++ L L +R++ +GY P
Sbjct: 657 RRNMKEQGVRKEPGCSWIEHGDE--VHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 714
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+ VL++V ++EK+ +L HSEKLA+AFG+L TSPG +R+ KNLR+C DCHL S
Sbjct: 715 DTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFIS 774
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+++ REI++RD RFH F++G CSCG+YW
Sbjct: 775 KIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 49/346 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL- 66
VF+++ +N W +LI + ++ + M E + P SFTL ++ AC+ +
Sbjct: 68 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 127
Query: 67 --DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +G+Q+HA + G S ++ NT++ MY K G L S+ + RD+V+
Sbjct: 128 PEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--- 182
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
W +++ QN + EA+EY M GVE D
Sbjct: 183 ----------------------------WNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 214
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ AC+ L +++ + A +G N VGSAL+DMY C + R+
Sbjct: 215 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 273
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG- 302
F GM R + +++MI G++ + A+ LF M ++ N T GV+ AC G
Sbjct: 274 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 333
Query: 303 ------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKM 338
+ + V D ++D+ R G ++ A+++ KM
Sbjct: 334 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
GI P ++ AL KA ++ D+ LG+QIHA G + V NT++ +Y KCG G
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
KVFD + ER+ VSW LI + K
Sbjct: 65 VYKVFDRISERNQVSWNSLI-------------------------------SSLCSFEKW 93
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVG 225
A+E F M VE TLV V++AC+ L + + ++ A G G +N+ ++
Sbjct: 94 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN 153
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+ MY K G + + + R++ ++++++ + + A++ +MV +
Sbjct: 154 T-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 286 PNGVTFIGVLTACSHV 301
P+ T VL ACSH+
Sbjct: 213 PDEFTISSVLPACSHL 228
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 312/557 (56%), Gaps = 46/557 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF+++ ++ WT LI GY ++I L M R P FT ++L KA
Sbjct: 9 SDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKAT 68
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
S+G+Q+HA + + D+YVG+ ++ MY +C
Sbjct: 69 GACGGCSIGEQMHALAVKYN-WDEDVYVGSALLDMYARCE-------------------- 107
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
M+ A +F+ L K++V+W A++ G+ + A + F MQ G
Sbjct: 108 -----------QMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 156
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T + SA A++G ++ WV A G VG+ ++ MY+K GS+ DA
Sbjct: 157 ATHFTYSSMFSAFARIGALEQGRWVH--AHLIKSGQKLTAFVGNTMLGMYAKSGSMVDAR 214
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +R++ ++++M+ A +G A+ F ++ K + N +TF+ VLTACSH G
Sbjct: 215 KVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGG 274
Query: 303 L-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L K Y V P DHY VDLLGRAG L+EAL V KMP+EP VWGALL
Sbjct: 275 LVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H+N ++ Q AA+H+FEL+PD G ++L NIYAS G W+D +RVR+++K TG+KK
Sbjct: 335 GACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKK 394
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
P SW++ + V H F A D THP S +I + ++ R++ GY PN VL ++++
Sbjct: 395 EPACSWVQIENSV-HMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQ 453
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E++ L HSEK+ALAF L+ GA++RIMKN+RIC DCH S+V REIVVRD
Sbjct: 454 ERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDT 513
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF +G CSCG+YW
Sbjct: 514 NRFHHFSEGSCSCGDYW 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y G + A +F+++P +D V+WT ++ GY QN P EAI M A + T
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 189 VGVISACAQLGVIKYANWVCEIAE-----GSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ A G C I E + +V VGSAL+DMY++C +D A
Sbjct: 62 TSLLKATGACG-------GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIM 114
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + +N S++++I GFA + F +M + T+ + +A + +G
Sbjct: 115 VFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG 173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY KCG++ DA +F M R+V S++ +I G+A + AI L DM++ +PNG T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 291 FIGVLTA------CSHVGLKCYGVSPS----TDHY--ACMVDLLGRAGCLEEALKMVEKM 338
F +L A CS +G + + ++ D Y + ++D+ R ++ A+ + +++
Sbjct: 61 FTSLLKATGACGGCS-IGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 339 PVEPNGGVWGALLG 352
V N W AL+
Sbjct: 120 -VSKNEVSWNALIA 132
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 317/571 (55%), Gaps = 61/571 (10%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+F+ ++ +N L W+A+I GY +G+ ++++ + M G P S T+ +L AC
Sbjct: 347 LFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACA 406
Query: 64 EVLDVSLGQQIHAQTI---LLG--------GFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
+ +S G + HA ++ LL G DL V N +I MY KC +R +F+
Sbjct: 407 SLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFN 466
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P R+ ++ V WT M+ GY Q +A++
Sbjct: 467 SIPRRE-----------------------------RNVVTWTVMIGGYAQYGDSNDALKL 497
Query: 173 FERM---QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
F M YA Y T+ ++ ACA L ++ + + V + LI
Sbjct: 498 FSEMISKPYAVAPNAY-TISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLI 556
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
DMYSKCG +D A +F M +RN S++SM+ G+ MHGR A+ +F M K P+ +
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616
Query: 290 TFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
+F+ +L ACSH G+ YGV S HYAC++DLL R+G L++A K +++
Sbjct: 617 SFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQE 676
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDV 397
MP+EP+ +W ALL AC++H N E+A+ A N L ++ + G+Y ++SNIYA+A W DV
Sbjct: 677 MPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDV 736
Query: 398 SRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY 457
+R+R+L+K +G+KK PG SW++G +G F GD +HP S EI L L+ R++ GY
Sbjct: 737 ARIRQLMKKSGIKKRPGCSWVQGKKGTA-SFFVGDRSHPLSPEIYSLLERLIGRIKVMGY 795
Query: 458 QPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG 517
P L+DV DEEK +L HSEKLALA+GLLTTSPG +RI KNLR+C DCH
Sbjct: 796 VPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIY 855
Query: 518 ASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EI+VRD+ RFHHF++G CSCG YW
Sbjct: 856 ISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 196/392 (50%), Gaps = 44/392 (11%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----RREGIGPVSFTLSA-- 57
LVF+++ K + W +++ ++ + + ++ L+ M + S +S
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ AC + + ++IH+ I G F +D +V N +I Y KCG + + VF+ M +
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTF-ADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPREAIEY 172
DVVSW ++ Y +G +A LF + PL D + W+A++ GY Q +EA++
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL-DVITWSAVIAGYAQRGYGQEALDT 382
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIA---EGSGFGPINNV 222
F++M G E + VT++ ++SACA LG + Y+ C ++ + G G ++
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442
Query: 223 VVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
VV +ALIDMYSKC S A IF + ++RNV +++ MI G+A +G ++ A++LF +M+
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502
Query: 281 KTE--TKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA--------CMVDLLGRA 325
PN T +L AC+H+ G + + Y C++D+ +
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G ++ A + + MP + N W +++ +H
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMH 593
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 58/353 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
V E+V W L+R +I +G L +I + C M R G P FTL KAC E+
Sbjct: 105 VLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPS 164
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVVSWTE 124
G H I GF S+++V N ++ MY + G L + VFDE+ + DV+SW
Sbjct: 165 YRSGSAFHG-LICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNS 223
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ A+ + +A LF+E+ T +V N + +D
Sbjct: 224 IVAAHVKGSNPRTALDLFSEM--------TTIVHEKATNER-----------------SD 258
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+++V ++ ACA L + + A + G + V +ALID Y+KCGS+ DA +
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRN--GTFADAFVCNALIDTYAKCGSMKDAVNV 316
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M+ ++V S+++M+ G+ G+ AA +LF +M K + +T+ V+ + G
Sbjct: 317 FNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRG-- 374
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV---EPNGGVWGALLGAC 354
YG +EAL ++M + EPN +LL AC
Sbjct: 375 -YG---------------------QEALDTFQQMILYGSEPNSVTIISLLSAC 405
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N WT+++ GY + G K+++ ++ M++ G P + L AC+
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G G + +I + + G L + K EMP E W
Sbjct: 629 GMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVA 688
Query: 125 LIVAYANNGDMESAGGLFNEL---PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + ++E A N+L ++ ++T + Y + ++ + M+ +G+
Sbjct: 689 LLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGI 748
Query: 182 E 182
+
Sbjct: 749 K 749
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 318/557 (57%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+ ++ WTALI G + G ++ + +MRR+ I P FT FKA +
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+Q+HA + G SD++VG + MY K G +RK+FD
Sbjct: 122 RSPLVGKQVHALAVKAGQI-SDVFVGCSAFDMYSKAGLTEEARKMFD------------- 167
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E+P ++ W A ++ V + +A+ F + G+E
Sbjct: 168 ------------------EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTD 209
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ V+SACA L V++ V +A + + N+ VGSAL+DMY KCGSI+DA R F
Sbjct: 210 FMVSSVLSACAGLSVLEVGKSVHTLAVKACV--VGNIFVGSALVDMYGKCGSIEDAERAF 267
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS---- 299
M +RN+ ++++MI G+A G+A A+ LF +M PN VTF+ VL+ACS
Sbjct: 268 DEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS 327
Query: 300 -HVGLKC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+VG++ YG+ P +HYAC+VDLLGRAG +E+A + ++KMP+ P VWGALL
Sbjct: 328 VNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 387
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA ++ E+ ++AA++LFEL+P GN+++LSN++A+AG W++ + VR+ +K G+KK
Sbjct: 388 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKK 447
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+ V H F+A D +H ++EIQ L L ++A GY P+ L+D+ +E
Sbjct: 448 GAGCSWITAGNAV-HVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEE 506
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK + HSEK+ALAFGL++ G +RI KNLRIC DCH + S ++GREI+VRDN
Sbjct: 507 EKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDN 566
Query: 532 MRFHHFQDGKCSCGNYW 548
FH F+D +CSC +YW
Sbjct: 567 NLFHRFRDNQCSCRDYW 583
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 18/244 (7%)
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ L+ Y+ SA L + P + V WTA++ G VQN + A+ +F M+ +
Sbjct: 45 YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI 104
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + T A L V +A + G I++V VG + DMYSK G ++A
Sbjct: 105 QPNDFTFPCAFKASGSLRSPLVGKQVHALAVKA--GQISDVFVGCSAFDMYSKAGLTEEA 162
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M +RN+ ++++ + + GR A+ F + K +P VL+AC+
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACA-- 220
Query: 302 GLKCYGVSPSTDHYA-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL V S A +VD+ G+ G +E+A + ++MP E N W
Sbjct: 221 GLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWN 279
Query: 349 ALLG 352
A++G
Sbjct: 280 AMIG 283
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 318/559 (56%), Gaps = 53/559 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT---- 63
VF++ + K F+W A+ R + +D + LY M GI FT + + KAC
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G++IHA IL G+ ++V T++ +Y + G++ + VF MP++++VSW+
Sbjct: 191 SICPLRKGKEIHAH-ILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWS 249
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA NE+P+K A+E F+ M +T
Sbjct: 250 AMIACYAK-----------NEMPMK--------------------ALELFQIMMLEACDT 278
Query: 184 --DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ +T+V V+ ACA L +++ V G + + V + LI MY +CG I
Sbjct: 279 VPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLD--STLPVLNTLITMYGRCGEISTG 336
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F MK+R+V S++S+I + MHG AIQ+F +M+ P+ +TFI VL ACSH
Sbjct: 337 QRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHA 396
Query: 302 G------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
G L Y + P +HYACMVD+LGRA L+EA+++++ M +P VWG+
Sbjct: 397 GLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGS 456
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLG+C+IH N E+A+ A+ LFELEP GNY++LS+IYA + MW+DV RVR+ L+ GL
Sbjct: 457 LLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGL 516
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
+K P SW+E R I+ + + +P E+ L LL ++ GY P V YD+
Sbjct: 517 QKIPSCSWIEVKRK-IYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLD 575
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+RI++ HS KLA+AFGL+ TS G +RI NLR+CEDCH FM S+ REI++R
Sbjct: 576 EEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLR 635
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFH F+DG CSCG+YW
Sbjct: 636 DVNRFHCFKDGVCSCGDYW 654
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 58/298 (19%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N L +L RG G+LK ++ L C P T L +C E +S G +H
Sbjct: 46 NDDLIQSLCRG----GNLKQAVQLLCCEP----NPTKKTFELLINSCIEQNSLSDGVDVH 97
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ ++ G D Y+ +I MY G + + KVFDE E+ + W + A A M
Sbjct: 98 HR-LVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALA----M 152
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
S G + + + +M + G+ ++ T V+ AC
Sbjct: 153 ASRG---------------------------EDLLVLYGQMNWIGIPSNRFTYTYVLKAC 185
Query: 196 --AQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
++L +C + +G G +V V + L+D+Y++ G + A +F
Sbjct: 186 VVSELS-------ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFG 238
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACSHVG 302
M +N+ S+S+MI +A + A++LF M+ +T PN +T + VL AC+ +
Sbjct: 239 AMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLA 296
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 18/189 (9%)
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G G + + + LI+MY GS+D A ++F +++ +F ++++ AM R +
Sbjct: 102 GSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLV 161
Query: 275 LFGDMVKTETKPNGVTFIGVLTACS---------------HVGLKCYGVSPSTDHYACMV 319
L+G M N T+ VL AC H + +G ++
Sbjct: 162 LYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLL 221
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP-DKI 378
D+ R G + A + MP + N W A++ AC + + + LE D +
Sbjct: 222 DVYARFGYVSYASSVFGAMP-DKNIVSWSAMI-ACYAKNEMPMKALELFQIMMLEACDTV 279
Query: 379 GNYIILSNI 387
N I + ++
Sbjct: 280 PNPITMVSV 288
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 338/610 (55%), Gaps = 71/610 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK----- 60
R VF+++ +N WTA++RGY+ +G + ++ +L+ M + + + L L +
Sbjct: 180 REVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRID 239
Query: 61 -ACTEVLDVSLGQQIHAQTILLGGFTS-----------------DLYVGNTMIGMYVKCG 102
AC + D+ + + +T ++GG+ ++ TMI YV+
Sbjct: 240 EAC-RLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQ 298
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA---------- 152
+ +RK+F+ MPE++ VSWT ++ Y N G ++ A LFN +P+K VA
Sbjct: 299 QVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQ 358
Query: 153 ---------------------WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
W+AM+ Y + +A+E F MQ G+ ++ +L+ V
Sbjct: 359 NGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISV 418
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+S CA L + + + S F +V V S L+ MY KCG++ A ++F +
Sbjct: 419 LSVCAGLANLDHGREIHAQLVRSQFDL--DVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------- 302
+V ++S+I G+A HG A+++F DM + P+ VTF+GVL+ACS+ G
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
Y V +HYACMVDLLGRAG L EA+ ++EKMP+E + +WGALLGAC+ H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
++A++AA L LEP G +I+LSNIYAS G WDDV+ +RR ++ + K PG SW+
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 420 GDRGVIHEFRAGDLT-HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
++ V H+F GD + HP +EI + L L L+ GY P+ VL+DV +EEK + L
Sbjct: 657 VEKKV-HKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLE 715
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+A+GLL G +R+MKNLR+C DCH + ++V GREI++RD RFHHF+
Sbjct: 716 YHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFK 775
Query: 539 DGKCSCGNYW 548
DG CSC +YW
Sbjct: 776 DGSCSCRDYW 785
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N++I Y + G + +R VFDEM +++++SW ++ Y N + A +F+++ ++ +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN---WVC 208
+W +V+GY+ N EA E F+RM E + V+ ++ + G+I A W
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
P NVV + ++ + G ID+A R+F M +++V + ++MI G+ GR
Sbjct: 218 ---------PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYACMVDLLG 323
A LF +M + N V++ ++T + K + V P + + L G
Sbjct: 269 LVEARMLFDEM----PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG 324
Query: 324 RAGC--LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
C L+EA ++ MP++ +L Q P+ Q+ ++ G +
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQV----FDQMREKDEGTW 380
Query: 382 IILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+ +Y G+ D + R+++ G++ N
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPN 411
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 26/196 (13%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N ++ ++LI YS+ G I+ A +F M+ +N+ S++S++ G+ + R A +F M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 280 VKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTD--HYACMVDLLGRAGCLEEAL 332
++ N +++ G+++ + G+ + + P + + MV + G + EA
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAE 211
Query: 333 KMVEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFELEPDK--------IGNYII 383
+ +MP E N W +LG Q R E A LF++ P+K IG Y
Sbjct: 212 TLFWQMP-EKNVVSWTVMLGGLLQEGRIDE-----ACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 384 LSNIYASAGMWDDVSR 399
+ + + ++D++ R
Sbjct: 266 VGRLVEARMLFDEMPR 281
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 338/610 (55%), Gaps = 71/610 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK----- 60
R VF+++ +N WTA++RGY+ +G + ++ +L+ M + + + L L +
Sbjct: 180 REVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRID 239
Query: 61 -ACTEVLDVSLGQQIHAQTILLGGFTS-----------------DLYVGNTMIGMYVKCG 102
AC + D+ + + +T ++GG+ ++ TMI YV+
Sbjct: 240 EAC-RLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQ 298
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA---------- 152
+ +RK+F+ MPE++ VSWT ++ Y N G ++ A LFN +P+K VA
Sbjct: 299 QVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQ 358
Query: 153 ---------------------WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
W+AM+ Y + +A+E F MQ G+ ++ +L+ V
Sbjct: 359 NGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISV 418
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+S CA L + + + S F +V V S L+ MY KCG++ A ++F +
Sbjct: 419 LSVCAGLANLDHGREIHAQLVRSQFDL--DVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------- 302
+V ++S+I G+A HG A+++F DM + P+ VTF+GVL+ACS+ G
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
Y V +HYACMVDLLGRAG L EA+ ++EKMP+E + +WGALLGAC+ H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
++A++AA L LEP G +I+LSNIYAS G WDDV+ +RR ++ + K PG SW+
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 420 GDRGVIHEFRAGDLT-HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
++ V H+F GD + HP +EI + L L L+ GY P+ VL+DV +EEK + L
Sbjct: 657 VEKKV-HKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLE 715
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+A+GLL G +R+MKNLR+C DCH + ++V GREI++RD RFHHF+
Sbjct: 716 YHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFK 775
Query: 539 DGKCSCGNYW 548
DG CSC +YW
Sbjct: 776 DGSCSCRDYW 785
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N++I Y + G + +R VFDEM +++++SW ++ Y N + A +F+++ ++ +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN---WVC 208
+W +V+GY+ N EA E F+RM E + V+ ++ + G+I A W
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
P NVV + ++ + G ID+A R+F M +++V + ++MI G+ GR
Sbjct: 218 ---------PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYACMVDLLG 323
A LF +M + N V++ ++T + K + V P + + L G
Sbjct: 269 LVEARMLFDEM----PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG 324
Query: 324 RAGC--LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
C L+EA ++ MP++ +L Q P+ Q+ ++ G +
Sbjct: 325 YTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQV----FDQMREKDEGTW 380
Query: 382 IILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+ +Y G+ D + R+++ G++ N
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPN 411
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 26/196 (13%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N ++ ++LI YS+ G I+ A +F M+ +N+ S++S++ G+ + R A +F M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 280 VKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTD--HYACMVDLLGRAGCLEEAL 332
++ N +++ G+++ + G+ + + P + + MV + G + EA
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAE 211
Query: 333 KMVEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFELEPDK--------IGNYII 383
+ +MP E N W +LG Q R E A LF++ P+K IG Y
Sbjct: 212 TLFWQMP-EKNVVSWTVMLGGLLQEGRIDE-----ACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 384 LSNIYASAGMWDDVSR 399
+ + + ++D++ R
Sbjct: 266 VGRLVEARMLFDEMPR 281
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 316/553 (57%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + K W AL+ GY + ++ LY M G+ P FT+ +L AC+ +
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH L G D ++G +++ +Y+ CG ++ +FD M R +VS
Sbjct: 424 LHYGEEIHGFA-LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS------ 476
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
W M+ GY QN P EAI F +M G++ +
Sbjct: 477 -------------------------WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 511
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V AC+QL ++ + A + ++ V S++IDMY+K G I + RIF
Sbjct: 512 IMCVCGACSQLSALRLGKELHCFALKAHL--TEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+++++V S++ +I G+ +HGR A++LF M++ KP+ TF G+L ACSH GL
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + P +HY C+VD+LGRAG +++AL+++E+MP +P+ +W +LL +C+
Sbjct: 630 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N + + AN L ELEP+K NY+++SN++A +G WDDV RVR +K GL+K+ G
Sbjct: 690 IHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 749
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E G +H F GD P E+++ L ++ + GY P+ SVL+D+ +E+K
Sbjct: 750 SWIEVG-GKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIG 808
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL HSEKLA++FGLL T+ G VR+ KNLRIC DCH S+V+ R+IVVRDN RFH
Sbjct: 809 ILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFH 868
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 869 HFRDGICSCGDYW 881
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 41/302 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKA 61
S R+VF++++ KN F W A++ Y +D++S++ + P +FTL + KA
Sbjct: 51 SDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 110
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C +LD+ LGQ IH + SD++VGN +I MY KCG + + KVF+ MPER++VS
Sbjct: 111 CAGLLDLGLGQIIHGMATKMD-LVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVS 169
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +I ++ NG ++ + F E+ + ++
Sbjct: 170 WNSIICGFSENGFLQESFNAFREMLVGEE-----------------------------SF 200
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D TLV V+ CA I+ V +A G ++V ++LIDMYSKC + +A
Sbjct: 201 VPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLN--EELMVNNSLIDMYSKCRFLSEA 258
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-----KPNGVTFIGVLT 296
+F ++N+ S++SMI G+A R + F + K +T K + T + VL
Sbjct: 259 QLLFDKNDKKNIVSWNSMIGGYA---REEDVCRTFYLLQKMQTEDAKMKADEFTILNVLP 315
Query: 297 AC 298
C
Sbjct: 316 VC 317
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 177/389 (45%), Gaps = 50/389 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFK 60
S +L+F++ KN W ++I GY + + + L M+ E + FT+ +
Sbjct: 256 SEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLP 315
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C E ++ +++H + G S+ V N I Y +CG L S +VFD M + V
Sbjct: 316 VCLERSELQSLKELHGYS-WRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVS 374
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S W A++ GY QN+ PR+A++ + +M +G
Sbjct: 375 S-------------------------------WNALLCGYAQNSDPRKALDLYLQMTDSG 403
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D+ T+ ++ AC+++ + Y + A +G + +G +L+ +Y CG
Sbjct: 404 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV--DPFIGISLLSLYICCGKPFA 461
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F GM+ R++ S++ MI G++ +G AI LF M+ +P + + V ACS
Sbjct: 462 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521
Query: 301 VG-------LKCYGVSP--STDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L C+ + + D + + ++D+ + GC+ + ++ +++ E + W
Sbjct: 522 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNV 580
Query: 350 LLGACQIH-RNPEIAQIAANHL-FELEPD 376
++ IH R E ++ L L+PD
Sbjct: 581 IIAGYGIHGRGKEALELFEKMLRLGLKPD 609
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+++F+ +++++ W +I GY G ++I+L+ M +GI P + + AC+++
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 522
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+++H L T D++V +++I MY K G +G S+++FD + E+DV SW +
Sbjct: 523 SALRLGKELHCFA-LKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVI 581
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y +G + +EA+E FE+M G++ D
Sbjct: 582 IAGYGIHG-------------------------------RGKEALELFEKMLRLGLKPDD 610
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T G++ AC+ G+++ + ++ P + + ++DM + G IDDA R+
Sbjct: 611 FTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEP--KLEHYTCVVDMLGRAGRIDDALRL 668
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS 299
M + +SS++ +HG ++ +++ E KP I L A S
Sbjct: 669 IEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACTEV 65
VFE + +N W ++I G+ G L++S + + M E P TL + C
Sbjct: 158 VFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE 217
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G +H + LG +L V N++I MY KC FL ++ +FD+ ++++VS
Sbjct: 218 EDIEKGMAVHGLAVKLG-LNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVS---- 272
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY--AGVET 183
W +M+ GY + ++MQ A ++
Sbjct: 273 ---------------------------WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKA 305
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSID 239
D T++ V+ C + ++ + E G+ G +N +V +A I Y++CG++
Sbjct: 306 DEFTILNVLPVCLERSELQ------SLKELHGYSWRHGLQSNELVANAFIAAYTRCGALC 359
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+ R+F M + V S+++++ G+A + A+ L+ M + P+ T +L ACS
Sbjct: 360 SSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
Query: 300 HVGLKCYG 307
+ YG
Sbjct: 420 RMKSLHYG 427
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ L +AC + D+ +G+++H F +D + +I MY CG SR VF
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF--- 57
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF- 173
++L K+ W A+V+ Y +N +A+ F
Sbjct: 58 ----------------------------DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E + + D TL VI ACA L + + +A + +++V VG+ALI MY
Sbjct: 90 ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA--TKMDLVSDVFVGNALIAMYG 147
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK--PNGVTF 291
KCG +++A ++F M +RN+ S++S+I GF+ +G + F +M+ E P+ T
Sbjct: 148 KCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATL 207
Query: 292 IGVLTACS 299
+ VL C+
Sbjct: 208 VTVLPVCA 215
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++ AC Q I+ + E+ S N+ V+ + +I MYS CGS D+ +F +++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSAST-QFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACS-----HVGLK 304
+N+F +++++ + + A+ +F +++ TE KP+ T V+ AC+ +G
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 305 CYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G++ D + ++ + G+ G +EEA+K+ E MP E N W +++
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSII 174
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 312/553 (56%), Gaps = 52/553 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ +N WT +I Y + ++ L M R+ + P +T S++ ++C + D
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V + + CG + E E DV + LI
Sbjct: 178 VRM----------------------------LHCG-------IIKEGLESDVFVRSALID 202
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+A G+ E A +F+E+ D + W +++ G+ QN++ A+E F+RM+ AG + T
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC L +++ A ++++ +AL+DMY KCGS++DA R+F
Sbjct: 263 LTSVLRACTGLALLELGMQ----AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK+R+V ++S+MI G A +G + A++LF M + TKPN +T +GVL ACSH GL
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YG+ P +HY CM+DLLG+AG L++A+K++ +M EP+ W LLGAC+
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ RN +A+ AA + L+P+ G Y +LSNIYA++ WD V +R ++ G+KK PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++ IH F GD +HP E+ + L L+ RL GY P VL D+ E+ +
Sbjct: 499 SWIEVNKQ-IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLALAFGL+T +RI KNLRIC DCH+F AS++ R IV+R +R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYH 617
Query: 536 HFQDGKCSCGNYW 548
HFQDGKCSCG+YW
Sbjct: 618 HFQDGKCSCGDYW 630
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 309/557 (55%), Gaps = 55/557 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K W ALI G+ G + ++ L M G P FT+S+L AC +
Sbjct: 407 VFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKS 466
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH +L G +D +VG +++ Y+ CG
Sbjct: 467 LQYGKEIHG-YVLRNGLETDFFVGTSLLSHYIHCG------------------------- 500
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
SA LF+ + K+ V+W AM++GY QN P E++ F + G+++ +
Sbjct: 501 ------KASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIA 554
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFG----PINNVVVGSALIDMYSKCGSIDDAYR 243
+V V AC+QL ++ E G+ + VG ++IDMY+K G I ++ +
Sbjct: 555 IVSVFGACSQLSALRLGK------EAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRK 608
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G+K +NV S++++I+ +HG AI+L+ M K P+ T+IG+L AC H GL
Sbjct: 609 VFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGL 668
Query: 304 KCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + P +HYAC++D+L RAG L++AL++V +MP E + +W +LL
Sbjct: 669 VEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C+ EI + A L ELEPDK NY++LSN+YA G WD V RVR+++K GL+K
Sbjct: 729 RSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQK 788
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+ G SW+E G ++ F GD P S EI+ L +R+ GY+PN SVL++V +E
Sbjct: 789 DAGCSWIEVG-GRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEE 847
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK IL HSEKLA++FGLL T+ G T+RI KNLRIC DCH S+ + REIVVRDN
Sbjct: 848 EKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDN 907
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 908 KRFHHFRDGLCSCCDYW 924
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 36/297 (12%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACT 63
RLVF+ ++ KN W AL+ GY G D + ++ + + P +FT ++ KAC
Sbjct: 98 SRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG 157
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+LDV LG+ IH I +G D++VGN ++GMY KCG + + KVFD MPE ++VSW
Sbjct: 158 GILDVRLGEVIHGMVIKMG-LVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWN 216
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A++ NG + L E+ + G+
Sbjct: 217 SMICAFSENGFSRDSFDLLMEM------------------------------LGEEGLLP 246
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VT+V ++ CA G + + +A G V+V +A++ MYSKCG +++A
Sbjct: 247 DVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSE--EVMVNNAMVYMYSKCGYLNEAQM 304
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM--VKTETKPNGVTFIGVLTAC 298
FV +NV S+++MI F++ G + A L +M E K N VT + VL AC
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 168/365 (46%), Gaps = 49/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACT 63
++ F + KN W +I + L+G + ++ +L M+ +G + T+ + AC
Sbjct: 303 QMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACL 362
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ L + +++H + F C + V E+
Sbjct: 363 DKLQLRSLKELHGYS------------------------FRHCFQHV--ELS-------N 389
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
I+AYA G + SA +F+ + K +W A++ G+ QN PR+A+ +M Y+G +
Sbjct: 390 AFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQP 449
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D+ T+ ++ ACA L ++Y + +G + VG++L+ Y CG A
Sbjct: 450 DWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLE--TDFFVGTSLLSHYIHCGKASSARV 507
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH--- 300
+F MK +N+ S+++MI G++ +G + ++ LF + + + + + V ACS
Sbjct: 508 LFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSA 567
Query: 301 --VGLKCYG----VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G + +G + D + ++D+ ++GC++E+ K+ + + + N W A++
Sbjct: 568 LRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIV 626
Query: 353 ACQIH 357
A IH
Sbjct: 627 AHGIH 631
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 35/250 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R++F+++K KN W A+I GY G +S++L+ EGI + ++F AC
Sbjct: 503 SSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGAC 562
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG++ H +L T D +VG ++I MY K G + SRKVFD + +
Sbjct: 563 SQLSALRLGKEAHG-YVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKD------ 615
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
K+ +W A++ + + +EAIE +ERM+ G
Sbjct: 616 -------------------------KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM 650
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA-LIDMYSKCGSIDDA 241
D T +G++ AC G+++ + E F I + A LIDM ++ G +DDA
Sbjct: 651 PDRFTYIGILMACGHAGLVEEG--LKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDA 708
Query: 242 YRIFVGMKQR 251
R+ M +
Sbjct: 709 LRLVNEMPEE 718
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 54/290 (18%)
Query: 19 LWTALIRGYILQGHLKDS--ISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHA 76
L TALI ++Q H +++ ISL +E IG L +AC D+ G+++H
Sbjct: 21 LTTALI---LIQSHSQNAAFISLQA---KEAIG-------LLLQACGNQKDIETGRRLHK 67
Query: 77 QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDME 136
+ +D + +I MY CG SR VFD M +++
Sbjct: 68 FVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNL----------------- 110
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETDYVTLVGVISAC 195
+ W A+V+GY +N + ++ F + + + D T VI AC
Sbjct: 111 --------------IQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC 156
Query: 196 AQLGVIKYANWVCEIAEGS--GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
+ ++ E+ G G + +V VG+AL+ MY KCG++D+A ++F M + N+
Sbjct: 157 GGILDVRLG----EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNL 212
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG 302
S++SMI F+ +G + + L +M+ E P+ VT + +L C+ G
Sbjct: 213 VSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEG 262
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N+ V+ + LI MY+ CGS D+ +F M+ +N+ +++++ G+ +G +++F D+
Sbjct: 77 NDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDL 136
Query: 280 VK-TETKPNGVTFIGVLTACS-----HVGLKCYGVSPST----DHYA--CMVDLLGRAGC 327
V T+ +P+ TF V+ AC +G +G+ D + +V + G+ G
Sbjct: 137 VSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA 196
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
++EA+K+ + MP E N W +++ A
Sbjct: 197 VDEAMKVFDFMP-ETNLVSWNSMICA 221
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 316/557 (56%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACT 63
R VF+ + ++ LW ALI G G + +SL+ MR+EG+ TL+++ K+
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +Q+HA +G SD +V N +I Y KCG L + KVF E D+
Sbjct: 421 SSEAICHTRQVHALAEKIG-LLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDI---- 475
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ T M+T Q +AI+ F +M G+E
Sbjct: 476 ---------------------------ISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEP 508
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D L +++AC L + V F ++V G+AL+ Y+KCGSI+DA
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF--TSDVFAGNALVYAYAKCGSIEDADM 566
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F G+ +R + S+S+MI G A HG A+ LF M+ PN +T VL+AC+H GL
Sbjct: 567 AFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGL 626
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +G+ + +HYACM+D+LGRAG LE+A+++V MP + N VWGALL
Sbjct: 627 VDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GA ++HR+PE+ ++AA LF LEP+K G +++L+N YASAGMWD++++VR+L+K + +KK
Sbjct: 687 GASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKK 746
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
P SW+E + +H F GD +HP + +I L +L D + GY PN+ L+DV
Sbjct: 747 EPAMSWVE-IKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRS 805
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ +L HSE+LA+AF L++T GA +R+ KNLRIC DCH+ S+++ REI++RD
Sbjct: 806 EKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDI 865
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF +G CSCG+YW
Sbjct: 866 NRFHHFTNGTCSCGDYW 882
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 186/417 (44%), Gaps = 55/417 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ + W A I G + GH ++ L M+ G+ P FTLS++ KAC
Sbjct: 262 VFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA 321
Query: 68 VSLGQQIHAQTI-LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+LG+QIH + + F D +V ++ MY K GFL +RKVFD MP RD++ W
Sbjct: 322 FNLGRQIHGFMVKAVADF--DEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILW---- 375
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY- 185
A+++G + + E + F RM+ G++ D
Sbjct: 376 ---------------------------NALISGCSHDGRHGEVLSLFHRMRKEGLDLDVN 408
Query: 186 -VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+ + A I + V +AE G ++V+ G LID Y KCG +D A ++
Sbjct: 409 RTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING--LIDSYWKCGQLDYAIKV 466
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + ++ S ++M+ + AI+LF M++ +P+ +L AC+ +
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526
Query: 305 CYGVSP---------STDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G ++D +A +V + G +E+A +P E W A++G
Sbjct: 527 EQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGG 585
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS---AGMWDDVSRVRRLLKMT 407
H + + A + + L+ N+I L+++ ++ AG+ DD + +K T
Sbjct: 586 LAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKET 640
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 45/366 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+ S R VF+++ W++L+ Y G +D++ + +MR G+ F L + K
Sbjct: 52 LPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK 111
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
DV G Q+HA + D++V N ++ +Y G + +R++FDE
Sbjct: 112 CAP---DVRFGAQVHALAVATR-LVHDVFVANALVAVYGGFGMVDEARRMFDE------- 160
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
Y G +A V+W M++ YV+N + +AI F M ++G
Sbjct: 161 --------YVGVGGERNA------------VSWNTMISAYVKNDQSGDAIGVFREMVWSG 200
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ V++AC ++ V +G+ +V +AL+DMYSK G I+
Sbjct: 201 ERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE--KDVFTANALVDMYSKLGDIEM 258
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
A +F M +V S+++ I G HG H A++L M + PN T VL AC+
Sbjct: 259 AATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAG 318
Query: 300 ----HVGLKCYG----VSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
++G + +G D + +VD+ + G L++A K+ + MP + +W A
Sbjct: 319 AGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNA 377
Query: 350 LLGACQ 355
L+ C
Sbjct: 378 LISGCS 383
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 192/479 (40%), Gaps = 104/479 (21%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N W +I Y+ D+I ++ M G P F S + ACT D+ G+Q+
Sbjct: 168 RNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQV 227
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H G V+ G+ E+DV + L+ Y+ GD
Sbjct: 228 H--------------------GAVVRTGY------------EKDVFTANALVDMYSKLGD 255
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+E A +F ++P D V+W A ++G V + A+E +M+ +G+ + TL V+ A
Sbjct: 256 IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKA 315
Query: 195 CA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
CA LG + V +A+ F V VG L+DMY+K G +DDA ++F M
Sbjct: 316 CAGAGAFNLGRQIHGFMVKAVADFDEF-----VAVG--LVDMYAKHGFLDDARKVFDFMP 368
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNGVTFIGVLTAC--------- 298
+R++ ++++I G + GR + LF M K + N T VL +
Sbjct: 369 RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHT 428
Query: 299 ---------------SHV----------------GLKCYGVSPSTD--HYACMVDLLGRA 325
SHV +K + S S D M+ L +
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQC 488
Query: 326 GCLEEALKMVEKM---PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK---IG 379
E+A+K+ +M +EP+ V +LL AC E + HL + + G
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG 548
Query: 380 NYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI---HEFRAGDLTH 435
N ++ + YA G +D + +GL + SW G+ H RA DL H
Sbjct: 549 NALVYA--YAKCGSIEDAD-----MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFH 600
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 61/305 (20%)
Query: 71 GQQIHAQTI---LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G +H+ + LL GF+ N ++ +Y +C +R VFDE+P+ VSW+ L+
Sbjct: 23 GAHLHSHLLKSGLLAGFS------NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVT 76
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY+NNG PR+A+ F M+ GV +
Sbjct: 77 AYSNNG-------------------------------MPRDALLAFRAMRGRGVPCNEFA 105
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-- 245
L V+ CA +++ V +A + +++V V +AL+ +Y G +D+A R+F
Sbjct: 106 L-PVVLKCAP--DVRFGAQVHALAVATRL--VHDVFVANALVAVYGGFGMVDEARRMFDE 160
Query: 246 -VGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
VG+ +RN S+++MI + + ++ AI +F +MV + +PN F V+ AC+
Sbjct: 161 YVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRD 220
Query: 300 -HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G + +G T + +VD+ + G +E A + EKMP + W A +
Sbjct: 221 LEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPA-ADVVSWNAFIS 279
Query: 353 ACQIH 357
C H
Sbjct: 280 GCVTH 284
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 322/557 (57%), Gaps = 55/557 (9%)
Query: 6 RLVFEQVKYKNPF--LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE+ + + + ALI GY + D+ ++ M+ G+ S T+ L CT
Sbjct: 105 RKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCT 164
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG+ +H + + GG S++ V N+ I MY+KCG
Sbjct: 165 VPEYLWLGRSLHGECVK-GGTYSEVAVLNSFITMYMKCG--------------------- 202
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ES LF+E+P+K + W A+++GY QN + +E FE+M+ +GV
Sbjct: 203 ----------SVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCP 252
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TLV V+S+CA LG K V E+ E +GF P NV + +ALI MY++CG++ A
Sbjct: 253 DPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAP--NVFLSNALISMYARCGNLAKARA 310
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +++ S+++MI + MHG + LF DM+K +P+G F+ VL+ACSH GL
Sbjct: 311 VFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGL 370
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P +HY+C+VDLLGRAG L+EA++ ++ MPVEP+G VWGALL
Sbjct: 371 TDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N ++A++A + E EP IG Y+++SNIY+ + + + R+R +++ +K
Sbjct: 431 GACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRK 490
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYS++E +G +H F AGD +H + E+ + +LD L+ + L + E
Sbjct: 491 KPGYSYVE-HKGKVHLFLAGDRSHEQTEEVHR----MLDELETSVME--LAGNMDCDRGE 543
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E HSE+LA+AFG+L + PG + ++KNLR+CEDCH+F+ S+++ R VVRD
Sbjct: 544 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDA 603
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH+F+DG CSC +YW
Sbjct: 604 SRFHYFKDGVCSCKDYW 620
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 52/410 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R Q +SISLY SM R G P +F+ + K+C + GQQ+H +
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH-V 76
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ GG ++ +V +I MY KCG + +RKVF+E P +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLG------------------ 118
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
V + A+++GY N+K +A F RM+ GV D VT++G++ C
Sbjct: 119 -----------VCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCT--- 164
Query: 200 VIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
V +Y W+ G G + V V ++ I MY KCGS++ R+F M + + +++
Sbjct: 165 VPEYL-WLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWN 223
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK-----------CY 306
++I G++ +G A+ ++LF M + P+ T + VL++C+H+G K
Sbjct: 224 AVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEAN 283
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G +P+ ++ + R G L +A + + MPV+ W A++G +H E
Sbjct: 284 GFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGETGLTL 342
Query: 367 ANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+ + + + PD ++LS + +G+ D + R +K K PG
Sbjct: 343 FDDMIKRGIRPDGAVFVMVLSAC-SHSGLTDKGLELFRAMKRE-YKLEPG 390
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 321/560 (57%), Gaps = 30/560 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT--LSALFKACT 63
R +F+++ + + L+ + G ++ + L+ +M S+ LS L ++
Sbjct: 71 RHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRS-- 128
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD-VVSW 122
G A+ + L + N M+ + G + + + F++ P+++ V W
Sbjct: 129 -------GAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLW 181
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGV 181
T ++ Y ++G +E A F +P++ V+W A+V GYV+N++ +A+ F+ M + A V
Sbjct: 182 TAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADV 241
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN-VVVGSALIDMYSKCGSIDD 240
+ TL V+ C+ L + + ++ + P++ V G++L+ MY KCG +D
Sbjct: 242 RPNESTLSSVLLGCSNLSALGFGR---QVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDG 298
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F M+ R+V ++++MI G+A HG AI+LF M +PN +TF+ VLTAC H
Sbjct: 299 ACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIH 358
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ + YG+ DHY+CMVDLL RAG LE A+ ++ MP +P+ +G
Sbjct: 359 TGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYG 418
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LL A ++++N E A+ AA L E P G Y+ L+NIYA A W DVSRVRR +K
Sbjct: 419 TLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNA 478
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+ K PGYSW+E + GVIH FR+ D HP + I + L L +R++A GY P+L L+DV
Sbjct: 479 VVKTPGYSWVEIN-GVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHDV 537
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ K ++LM HSEKLA+AFGLL+T+PG T+RI KNLR+C DCH S++ REI++
Sbjct: 538 DESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDREIIL 597
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+ G CSCG+YW
Sbjct: 598 RDTTRFHHFRSGHCSCGDYW 617
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP--LKDKVAWTAMVTGY 160
L +R +FD +P D VS+ L+ + GD+ A LF +P ++ +W M++G
Sbjct: 66 LLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGL 125
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGP-I 219
++ EA F M IS A + +A +C E P
Sbjct: 126 SRSGAVGEARAVFLAMPAR----------NSISWNAMVSCFAHAGDMCAAEECFEDAPDK 175
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V+ +A++ Y G ++ A + F M R++ S+++++ G+ + RA A+ +F M
Sbjct: 176 ENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTM 235
Query: 280 VK-TETKPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGC 327
V+ + +PN T VL CS++ +G +S +V + + G
Sbjct: 236 VRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGD 295
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIH 357
L+ A K+ +M + + W A++ H
Sbjct: 296 LDGACKLFSEMRIR-DVIAWNAMISGYAHH 324
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 317/556 (57%), Gaps = 47/556 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+++ ++ W ++ + G + ++ L+ M++EG FT+S++ AC
Sbjct: 101 ARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAA 160
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V +Q+H L S+++VG ++ +Y KCG +
Sbjct: 161 KCCVFECKQLHGFA-LKTALDSNVFVGTALLDVYAKCGLV-------------------- 199
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ A +F +P + V W++MV GYVQN EA+ F R Q G+E +
Sbjct: 200 -----------KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 248
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ +SACA + V ++ +G G +N+ V S+LIDMY+KCG I++AY +
Sbjct: 249 QFTISSALSACAARAALIEGKQVQAVSCKTGIG--SNIFVISSLIDMYAKCGIIEEAYTV 306
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F ++++NV +++++ GF+ H R+ A+ F M + PN +T+I VL+ACSH+GL
Sbjct: 307 FSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLV 366
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + VSP+ HY+CMVD+LGRAG L EA +++MP + +WG+LL
Sbjct: 367 EKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+I+RN E+A++AA HLFE+EP GN+++LSNIYA+ W++V+R R LLK + KK
Sbjct: 427 SCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKE 486
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E V H F G+ HP EI L DL+ ++ GY+ L+DV +
Sbjct: 487 RGKSWIEIKHKV-HSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLAL FG++ GA +RIMKNLRIC DCH FM AS + REI+VRD
Sbjct: 546 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 605
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSCG +W
Sbjct: 606 RFHHFKNGYCSCGEFW 621
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 50/300 (16%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G HAQ I +G +D N ++ MY KCG + +RK+FDEMP R +VSW ++ ++
Sbjct: 66 GMACHAQIIRVG-LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NGD E A LF + MQ G T+
Sbjct: 125 QNGDCEKALVLFMQ-------------------------------MQKEGTSCSEFTVSS 153
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPI--NNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V+ ACA K + C+ G +NV VG+AL+D+Y+KCG + DA +F M
Sbjct: 154 VVCACAA----KCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECM 209
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV------- 301
+R+ ++SSM+ G+ + A+ LF + N T L+AC+
Sbjct: 210 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 269
Query: 302 ---GLKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ C G+ + + ++D+ + G +EEA + + E N +W A+L H
Sbjct: 270 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRH 328
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 303/557 (54%), Gaps = 54/557 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE+V KN +W +I+G++ L+ MRR G F + L +AC V
Sbjct: 170 VFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYA 229
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ H I S+ ++ +++ MY+KCGFL + K
Sbjct: 230 GKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALK------------------ 271
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
LF E+ +D V W+A++ G+ +N + E+I F +M V + VT
Sbjct: 272 -------------LFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVT 318
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDDAYR 243
++ AC+ LG +K V G+ N V + ++ IDMY+KCG I AYR
Sbjct: 319 FASIVLACSSLGSLKQGRSV------HGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F + ++NVFS+S+MI GF MHG A+ LF +M PN VTF+ VL+ACSH G
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGR 432
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG++P +HYACMVDLLGRAG ++EAL + MP EP WGALL
Sbjct: 433 IEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IHR E+A+ A L LE D+ G Y++LSNIYA GMW+ V + R + G+ K
Sbjct: 493 GACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHK 552
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G++ +E + ++ F + D +T+I+ L +R++ GY P+LR VL+DV DE
Sbjct: 553 IVGFTSIEIEEK-LYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDE 611
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA+ FGLL + G +RI KN+R+C DCH S + R+I++RD
Sbjct: 612 VKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDV 671
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHH QDG CSCG+YW
Sbjct: 672 KRFHHVQDGVCSCGDYW 688
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 61/368 (16%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + ++N W ++ + D + L+ M +EG SF L KAC +
Sbjct: 70 FNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF 129
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+ H+ I L D YV ++ +Y TEL
Sbjct: 130 QGAKLFHSLAIKLR-LEGDPYVAPALMNVY------------------------TEL--- 161
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
G +E A +F E+PLK+ V W M+ G++ ++ E F RM+ +G E D +
Sbjct: 162 ----GSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVV 217
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPI--------NNVVVGSALIDMYSKCGSIDD 240
G+I AC + YA EG F + +N + ++L+DMY KCG +D
Sbjct: 218 EGLIQACGNV----YAG-----KEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDF 268
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F + R+V +S++I GFA +GRA +I +F M+ PN VTF ++ ACS
Sbjct: 269 ALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSS 328
Query: 301 VG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+G + GV +Y +D+ + GC+ A ++ ++P E N W
Sbjct: 329 LGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWST 387
Query: 350 LLGACQIH 357
++ +H
Sbjct: 388 MINGFGMH 395
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 38/289 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F +FE++ Y++ +W+A+I G+ G +SIS++ M + + P S T +++ AC+
Sbjct: 268 FALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACS 327
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ +H I G D+ + I MY KCG + + +VF ++PE++V SW
Sbjct: 328 SLGSLKQGRSVHGYMI-RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSW- 385
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ M+ G+ + EA+ F M+
Sbjct: 386 ------------------------------STMINGFGMHGLCAEALNLFYEMRSVNQLP 415
Query: 184 DYVTLVGVISACAQLGVIKYANW--VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT V V+SAC+ G I+ W ++ G P+ + ++D+ + G ID+A
Sbjct: 416 NSVTFVSVLSACSHSGRIE-EGWSHFKSMSRDYGITPVEEHY--ACMVDLLGRAGKIDEA 472
Query: 242 YRIFVGMKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNGV 289
M S +LG +H RA A ++ ++ E+ +GV
Sbjct: 473 LSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGV 521
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 31/245 (12%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY G + A FN + ++ +W ++ + +N + ++ F+RM G D
Sbjct: 56 AYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFN 115
Query: 188 LVGVISACAQLGVIKYANWVCEIA-----EGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
LV + AC L + + A +A EG + V AL+++Y++ GS+++A+
Sbjct: 116 LVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPY-------VAPALMNVYTELGSLEEAH 168
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F + +N + MI G +LF M ++ + + G++ AC +V
Sbjct: 169 KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNV- 227
Query: 303 LKCYGVSPSTDHYAC---------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
G T H C +VD+ + G L+ ALK+ E++ + VW
Sbjct: 228 --YAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR-DVVVW 284
Query: 348 GALLG 352
A++
Sbjct: 285 SAIIA 289
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 316/560 (56%), Gaps = 34/560 (6%)
Query: 6 RLVFEQVK--YKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
R VF+ V ++ LW A++ GY G ++++ L+ M E G+ P T++ + AC
Sbjct: 327 RRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC 386
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +H +L G + +V N ++ +Y + G + +R +F + RDVVSW
Sbjct: 387 ARSETFAGKEAVHGY-VLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSW 445
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
LI G + A L E+ + G +A + I + V
Sbjct: 446 NTLITGCVVQGHIHDAFQLVREMQQQ----------GRFTDATTEDGIAGTDEEP---VV 492
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ VTL+ ++ CA L + A +++ VGSAL+DMY+KCG + +
Sbjct: 493 PNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALD--SDIAVGSALVDMYAKCGCLALSR 550
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHV 301
+F + +RNV +++ +I+ + MHG AI LF MV + E KPN VTFI L ACSH
Sbjct: 551 AVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHS 610
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM-PVEPNGGVWG 348
G+ + +GV P+ D +AC VD+LGRAG L+EA ++ M P E W
Sbjct: 611 GMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWS 670
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+ LGAC++HRN + +IAA LF+LEPD+ +Y++L NIY++AG+W+ S VR ++ G
Sbjct: 671 SFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRG 730
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+ K PG SW+E D GVIH F AG+ HP ST + + L +R++ GY P+ SVL+D+
Sbjct: 731 VSKEPGCSWIELD-GVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDI 789
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ EK IL HSEKLA+AFGLL T PGAT+R+ KNLR+C DCH S+++GREIV+
Sbjct: 790 EESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVL 849
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF DG CSCG+YW
Sbjct: 850 RDVRRFHHFVDGACSCGDYW 869
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 158/370 (42%), Gaps = 66/370 (17%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++ + G ++I + M G+ P T ++ AC+++ +SLG+++HA +
Sbjct: 239 WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWTELIVAYANNGDMES 137
++ +V + ++ MY +G +R+VFD +P R + W ++
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVC---------- 348
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVISACA 196
GY Q EA+E F RM+ AGV T+ GV+ ACA
Sbjct: 349 ---------------------GYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACA 387
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ V G +N V +AL+D+Y++ G ++ A IF ++ R+V S+
Sbjct: 388 RSETFAGKEAVHGYVLKRGMA--DNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSW 445
Query: 257 SSMILGFAMHGRAHAAIQLFGDM--------VKTE----------TKPNGVTFIGVLTAC 298
+++I G + G H A QL +M TE PN VT + +L C
Sbjct: 446 NTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGC 505
Query: 299 SHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+ + + Y + + D + +VD+ + GCL + + +++P + N W
Sbjct: 506 AMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITW 564
Query: 348 GALLGACQIH 357
L+ A +H
Sbjct: 565 NVLIMAYGMH 574
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ AYA GD+ +A LFN +P +D V + +++ + A++ M G
Sbjct: 102 LLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLS 161
Query: 185 YVTLVGVISACAQLGV-IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
TLV V+ AC+ L ++ A +GF + +AL+ MY++ G +DDA
Sbjct: 162 SFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQM 221
Query: 244 IFVGMKQRN-----VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+F + + V ++++M+ GR AI++ DMV +P+G+TF L AC
Sbjct: 222 LFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPAC 281
Query: 299 SHVGLKCYG 307
S + + G
Sbjct: 282 SQLEMLSLG 290
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
GF P V +AL+ Y++CG + A +F M R+ +++S+I + R A+
Sbjct: 93 GFTP----AVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALD 148
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVG 302
DM+ + T + VL ACSH+
Sbjct: 149 ALRDMLLEGHPLSSFTLVSVLLACSHLA 176
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/552 (37%), Positives = 309/552 (55%), Gaps = 46/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++++ K+ WT+LI GY ++I L M + P FT ++L KA D
Sbjct: 108 VFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G QIHA + + D+YVG+ ++ MY +CG
Sbjct: 168 SGIGGQIHALAVKCD-WHEDVYVGSALLDMYARCG------------------------- 201
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M+ A +F++L K+ V+W A+++G+ + A+ F MQ G E + T
Sbjct: 202 ------KMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFT 255
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ S A +G ++ WV A VG+ ++DMY+K GS+ DA ++F
Sbjct: 256 YSSIFSGLAGIGALEQGKWVH--AHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFER 313
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +++ +++SM+ FA +G A+ F +M K+ N +TF+ +LTACSH GL
Sbjct: 314 VLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEG 373
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
K Y + P +HY +VDLLGRAG L AL + KMP+EP VWGALL AC++
Sbjct: 374 KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRM 433
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+N ++ Q AA+H+F+L+PD G ++L NIYAS G WD +RVR+++K TG+KK P S
Sbjct: 434 HKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACS 493
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E V H F A D THP + EI + ++ +++ +GY P++ VL V ++E++
Sbjct: 494 WVEIGNSV-HMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREAN 552
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEK+ALAF L+ GAT+RIMKN+RIC DCH S+V REIVVRD RFHH
Sbjct: 553 LQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHH 612
Query: 537 FQDGKCSCGNYW 548
F +G CSCG+YW
Sbjct: 613 FSNGSCSCGDYW 624
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 46/317 (14%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P A AC + ++ ++IH + F D ++ N++I +Y KCG + +
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGH-LASSRFEGDAFLDNSLIHLYCKCGSVVEA 105
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
KVFD+M + KD V+WT+++ GY QN P
Sbjct: 106 HKVFDKMRK-------------------------------KDMVSWTSLIAGYAQNDMPA 134
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EAI M + + T ++ A + +A + +V VGSA
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWH--EDVYVGSA 192
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+DMY++CG +D A +F + +N S++++I GFA G A+ +F +M + +
Sbjct: 193 LLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEAT 252
Query: 288 GVTFIGVLTACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVE 336
T+ + + + +G + + V A M+D+ ++G + +A K+ E
Sbjct: 253 HFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFE 312
Query: 337 KMPVEPNGGVWGALLGA 353
++ + + W ++L A
Sbjct: 313 RV-LNKDLVTWNSMLTA 328
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/561 (38%), Positives = 328/561 (58%), Gaps = 53/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE- 64
R VF++ + + +++ AL R L GH ++ +++Y M GI FT + + KAC
Sbjct: 125 RKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVAS 184
Query: 65 ---VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
V ++ G++IHA IL G+ +++ T++ MY K GC
Sbjct: 185 ECFVSLLNKGREIHAH-ILRHGYDGYVHIMTTLVDMYAK---FGC--------------- 225
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ +A +FN++P+K+ V+W+AM+ Y +N K EA+E F +
Sbjct: 226 -------------VSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQ 272
Query: 182 E--TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ + VT+V V+ ACA L ++ + G I V+ SAL+ MY++CG ++
Sbjct: 273 DLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVI--SALVTMYARCGKLE 330
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
R+F M +R+V S++S+I + +HG AI +F +M +P+ ++F+ VL ACS
Sbjct: 331 LGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACS 390
Query: 300 HVGLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL +G+ PS +HYACMVDLLGRA LEEA K++E M +EP VW
Sbjct: 391 HAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVW 450
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LLG+C+IH N E+A+ A+ LF+LEP GNY++L++IYA AGMWD V RV++LL+
Sbjct: 451 GSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEAR 510
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GL+K PG SW+E R I+ F + D +P ++ L L L+ +GY P + VLYD
Sbjct: 511 GLQKVPGRSWIEVKRK-IYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYD 569
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ EK+RI++ HSEKLA+AFGL+ +S G +RI K+LR+CEDCH F S+ +EI+
Sbjct: 570 LKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEIL 629
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSCG+YW
Sbjct: 630 VRDVNRFHHFRDGVCSCGDYW 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 16 NPFLWTA----LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLG 71
NP TA LI+ QG+L ++ L S+ P T L +CT +
Sbjct: 34 NPTASTADNNKLIQSLCKQGNLTQALELL-SLEP---NPAQHTYELLILSCTHQNSLLDA 89
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
Q++H + +L GF D ++ +I MY + +RKVFD+ R + + L A +
Sbjct: 90 QRVH-RHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSL 148
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G E E + + RM G+ +D T V
Sbjct: 149 AGHGE-------------------------------EVLNMYRRMNSIGIPSDRFTYTYV 177
Query: 192 ISAC-AQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
+ AC A + N EI A G V + + L+DMY+K G + +A +F M
Sbjct: 178 LKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMP 237
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK---PNGVTFIGV 294
+NV S+S+MI +A +G+A A++LF +++ ET+ PN VT + V
Sbjct: 238 VKNVVSWSAMIACYAKNGKAFEALELFRELM-LETQDLCPNSVTMVSV 284
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + LI+MYS SID+A ++F + R ++ Y+++ ++ G + ++ M
Sbjct: 107 LATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIG 166
Query: 284 TKPNGVTFIGVLTACS---------------HVGLKCYGVSPSTDHYACMVDLLGRAGCL 328
+ T+ VL AC H + +G +VD+ + GC+
Sbjct: 167 IPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCV 226
Query: 329 EEALKMVEKMPVEPNGGVWGALLGAC 354
A + +MPV+ N W A++ AC
Sbjct: 227 SNASCVFNQMPVK-NVVSWSAMI-AC 250
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 306/513 (59%), Gaps = 19/513 (3%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P F SAL KAC + + LG+Q+H I+ +++D V ++++ MY KC L C++
Sbjct: 40 PDDFVFSALVKACANLGSIKLGKQVHCHFIV-SEYSNDDVVKSSLVDMYAKCRLLDCAKA 98
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD + ++ +SWT ++ YA +G E A LF LP+K+ +WTA+++G+VQ+ K EA
Sbjct: 99 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEA 158
Query: 170 IEYFERMQYAGVET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
F M+ V+ D + L ++ ACA L V + GF + V + +AL
Sbjct: 159 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD--SCVFISNAL 216
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
IDMY+KC + A IF M+ R+V S++S+I+G A HG+A A+ L+ +MV KPN
Sbjct: 217 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNE 276
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
VTF+G++ ACSHVG K YG+ PS HY C++DLLGR+G L+EA ++
Sbjct: 277 VTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 336
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-LEPDKIGNYIILSNIYASAGMWD 395
MP P+ W ALL AC+ ++ A+HL +P YI+LSNIYASA +W
Sbjct: 337 TMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWG 396
Query: 396 DVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-A 454
VS RR L ++K+PGYS +E R F AG+ +H +I + L L + ++
Sbjct: 397 KVSEARRKLGDMEVRKDPGYSSVEV-RKETEVFYAGETSHALKEDIFRLLKKLEEEMRIR 455
Query: 455 DGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLF 514
+GY P+ +L+D+ ++EK+++L HSE+ A+A+GLL PG +RI+KNLR+C DCH+
Sbjct: 456 NGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVV 515
Query: 515 MCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+ S++ REI+VRD R+HHF+ GKCSC ++
Sbjct: 516 LKHISEITEREIIVRDATRYHHFKGGKCSCNDF 548
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
+F ++ KN + WTALI G++ G ++ S++ MRRE + + LS++ AC +
Sbjct: 130 LFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 189
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
G+Q+H I L GF S +++ N +I MY KC + ++ +F M RDVVSWT LI
Sbjct: 190 ASIAGRQVHGLVIAL-GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 248
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V A +G E A L++E M GV+ + V
Sbjct: 249 VGMAQHGQAEKALALYDE-------------------------------MVSHGVKPNEV 277
Query: 187 TLVGVISACAQLG-VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T VG+I AC+ +G V K + + G P ++ + L+D+ + G +D+A +
Sbjct: 278 TFVGLIYACSHVGFVAKGRELFQSMTKDYGIRP--SLQHYTCLLDLLGRSGLLDEAENLI 335
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M + ++++++ G+ +++ +V + + T+I
Sbjct: 336 HTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYI 383
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 38/166 (22%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP RD ++W ++ A N+ L K W G +P
Sbjct: 1 MPHRDHIAWASVLTA-------------LNQANLSGKTLWVFSSVGSSSGLRP------- 40
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CE--IAEGSGFGPINNVVVGSALID 230
D ++ ACA LG IK V C ++E S N+ VV S+L+D
Sbjct: 41 ----------DDFVFSALVKACANLGSIKLGKQVHCHFIVSEYS-----NDDVVKSSLVD 85
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
MY+KC +D A +F ++ +N S+++M+ G+A GR A++LF
Sbjct: 86 MYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 131
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 318/584 (54%), Gaps = 58/584 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACTEV 65
V + + + L+RG +D++ L+ SMR +G P +T K+C
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+QIH+ T LG +++V ++ I MY +CG + ++F+EM RDVVSW +
Sbjct: 136 DGLVLGRQIHSSTARLG-LDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAM 194
Query: 126 IVAYANNG--------------------------------------DMESAGGLFNELPL 147
I +A+ G D+ G+F+E+
Sbjct: 195 ISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRF 254
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
K ++W AM+ Y N EA+E F RMQ G+E D VTL V+ +C ++ + +
Sbjct: 255 KGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRI 314
Query: 208 CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG 267
E+ + +++++ +AL+DMY+ CG + +A +F M R+V S++S+I + HG
Sbjct: 315 HEVIKRRRM--CSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHG 372
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------------VSPSTDHY 315
AI LF M +P+ + F+ +L ACSH GL G ++P +HY
Sbjct: 373 HGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHY 432
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP 375
ACMVDLLGRAGC+ EA + MP++PN VWGALLGAC+IH N +I +AA+ L L P
Sbjct: 433 ACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAP 492
Query: 376 DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLT 434
+ G Y++LSNIYA AG W DVS VR +++ G+KK PG S E GDR +H F GD +
Sbjct: 493 KQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDR--VHTFHIGDTS 550
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS 494
HP S I + L +LL R++ GY P + + L+DV +E+K+ L HSEKLA+AF L+ T+
Sbjct: 551 HPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTN 610
Query: 495 PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
PG +RI NLR C DCH S + GREI+++D R H+ +
Sbjct: 611 PGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT++I Y GH +++I L+ M +G+ P S A+ AC+
Sbjct: 347 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 406
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTM---IGMYVKCGFLGCSRKVFD 112
+ +G+ TS+ ++ + M G GC R+ +D
Sbjct: 407 GLLDMGKH------YFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYD 450
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 323/557 (57%), Gaps = 55/557 (9%)
Query: 6 RLVFEQVKYKNPF--LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE+ + + ALI GY + D+ ++ M+ G+ S T+ L CT
Sbjct: 108 RKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG+ +H Q + GG S++ V N+ I MY+KCG + R+
Sbjct: 168 VPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFITMYMKCGSVEAGRR-------------- 212
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LF+E+P+K + W A+++GY QN + +E +E+M+ +GV
Sbjct: 213 -----------------LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TLV V+S+CA LG K + V ++ E +GF P NV V +A I MY++CG++ A
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP--NVFVSNASISMYARCGNLAKARA 313
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M +++ S+++MI + MHG + LF DM+K +P+G F+ VL+ACSH GL
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y + P +HY+C+VDLLGRAG L+EA++ +E MPVEP+G VWGALL
Sbjct: 374 TDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC+IH+N ++A++A + E EP+ IG Y+++SNIY+ + + + R+R +++ +K
Sbjct: 434 GACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRK 493
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYS++E +G +H F AGD +H + E+ + +LD L+ + L + E
Sbjct: 494 KPGYSYVE-HKGRVHLFLAGDRSHEQTEEVHR----MLDELETSVME--LAGNMDCDRGE 546
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E HSE+LA+AFG+L + PG + ++KNLR+CEDCH+F+ S+++ R+ VVRD
Sbjct: 547 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDA 606
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH+F+DG CSC +YW
Sbjct: 607 SRFHYFKDGVCSCKDYW 623
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 52/410 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R Q +SISLY SM R G P +F+ + K+C + GQQ+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH-V 79
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
GG ++ +V +I MY KCG + +RKVF+E P+ +S
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS------------------ 121
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
V + A+++GY N+K +A F RM+ GV D VT++G++ C
Sbjct: 122 -----------VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT--- 167
Query: 200 VIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
V +Y W+ G G + V V ++ I MY KCGS++ R+F M + + +++
Sbjct: 168 VPEYL-WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK-----------CY 306
++I G++ +G A+ ++L+ M + P+ T + VL++C+H+G K
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G P+ + + R G L +A + + MPV+ W A++G +H EI +
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLML 345
Query: 367 ANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+ + + + PD ++LS + +G+ D + R +K K PG
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSAC-SHSGLTDKGLELFRAMKRE-YKLEPG 393
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 317/541 (58%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ALI G++ G + ++ LY MR G+ P FT+++L AC + +S G++IH ++
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHG-SM 528
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L GF D ++ +++ +YV+CG + ++ FD M E+++V
Sbjct: 529 LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLV------------------- 569
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
W M+ G+ QN P +A++ F +M + + D ++++G + AC+Q+
Sbjct: 570 ------------CWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVS 617
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + A S + V +LIDMY+KCG ++ + IF + + +++ +
Sbjct: 618 ALRLGKELHCFAVKSHL--TEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I G+ +HG AI+LF M +P+ VTFI +LTAC+H GL +G
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFG 735
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HYAC+VD+LGRAG L EAL++V ++P +P+ +W +LL +C+ +R+ +I + A
Sbjct: 736 IKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVA 795
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
N L EL PDK NY+++SN YA G WD+V ++R+ +K GL+K+ G SW+E G +
Sbjct: 796 NKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIG-GKVSR 854
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD + S +IQQ +L ++ GY+P+ VL+++ ++EK +IL HSEKLA++
Sbjct: 855 FLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAIS 914
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGLL T+ G T+R+ KNLRIC DCH + S++ REI+VRDN RFHHF++G CSCG+Y
Sbjct: 915 FGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDY 974
Query: 548 W 548
W
Sbjct: 975 W 975
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 146/294 (49%), Gaps = 35/294 (11%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEV 65
LVF + KN FLW AL+ GY+ +D++ ++ M P +FTL + KAC V
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGV 209
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV LG+ +H L SD++VGN +I MY K GF+ + KVFD+MP+R++VSW +
Sbjct: 210 YDVRLGEAVHGFA-LKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A NG E + GLF L D+ G+ D
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDE-----------------------------GLMPDV 299
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V VI CA+ G ++ +A G + V S+L+DMYSKCG + +A R+
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLA--LKLGLCGELKVNSSLLDMYSKCGYLCEA-RVL 356
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTAC 298
++NV S++SMI G++ A +L M ++ + K N VT + VL C
Sbjct: 357 FDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 49/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
R++F+ KN W ++I GY + + L M+ E V+ TL + C E
Sbjct: 354 RVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE 412
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ ++IH + G SD V N + Y KCG L + VF M E +VS
Sbjct: 413 EIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGM-ESKMVS--- 468
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+W A++ G+VQN PR+A++ + M+ +G+E D
Sbjct: 469 ---------------------------SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ ++SACA+L + + +GF + + +L+ +Y +CG I A
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI--SLVSLYVQCGKILLAKLF 559
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F M+++N+ +++MI GF+ + A+ +F M+ ++ P+ ++ IG L ACS V
Sbjct: 560 FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSAL 619
Query: 303 -----LKCYGV-SPSTDH---YACMVDLLGRAGCLEEALKMVEKMPVEPNGGV-WGALLG 352
L C+ V S T+H ++D+ + GC+E++ + ++ V G V W L+
Sbjct: 620 RLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDR--VHLKGEVTWNVLIT 677
Query: 353 ACQIH 357
IH
Sbjct: 678 GYGIH 682
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACTEV 65
VF+++ +N W +++ + G ++S L+ + EG+ P T+ + C
Sbjct: 253 VFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQ 312
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+V LG H + LG +L V ++++ MY KCG+L C +V + E++V+SW +
Sbjct: 313 GEVRLGMVFHGLALKLG-LCGELKVNSSLLDMYSKCGYL-CEARVLFDTNEKNVISWNSM 370
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y+ + D A L ++ ++DK V+ +
Sbjct: 371 IGGYSKDRDFRGAFELLRKMQMEDK------------------------------VKVNE 400
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTL+ V+ C + + A GF ++ +V +A + Y+KCGS+ A +F
Sbjct: 401 VTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQ-SDELVANAFVAGYAKCGSLHYAEGVF 459
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GLK 304
GM+ + V S++++I G +G A+ L+ M + +P+ T +L+AC+ + L
Sbjct: 460 CGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLS 519
Query: 305 C 305
C
Sbjct: 520 C 520
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 28 ILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSD 87
LQ +L D +S S ++ IG L + C E ++ +G++IH
Sbjct: 76 FLQSNLNDVVSSSNSKPKQLIG-------LLLQLCGEYKNIEIGRKIH------------ 116
Query: 88 LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPL 147
F+ S + DVV T L+ Y+ + +FN
Sbjct: 117 --------------NFISTSPHF-----QNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
K+ W A+++GY++N+ R+A+ F E + D TL VI AC + ++
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V A + +++V VG+ALI MY K G ++ A ++F M QRN+ S++S++ +
Sbjct: 218 VHGFALKTKV--LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 267 GRAHAAIQLFGDMVKTET--KPNGVTFIGVLTACSHVG 302
G + LF ++ + P+ T + V+ C+ G
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG 313
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++V K W LI GY + GH + +I L+ SM+ G P S T AL AC
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V+ G + Q L G L ++ M + G L + ++ +E+P++ D W+ L+
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779
Query: 127 VAYANNGDMESAGGLFNELPL--KDKVAWTAMVTG-YVQNAKPREAIEYFERMQYAGVET 183
+ N D++ + N+L DK +++ Y + K E + +RM+ G++
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839
Query: 184 D 184
D
Sbjct: 840 D 840
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 321/557 (57%), Gaps = 50/557 (8%)
Query: 6 RLVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VFE + + WTA++ Y G +++ ++ MR+ + P L ++ A T
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFT 233
Query: 64 EVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D+ G+ IHA + +G DL + ++ MY KCG
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCG-------------------- 271
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ +A LF+++ + + W AM++GY +N REAI+ F M V
Sbjct: 272 -----------QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +++ ISACAQ+G ++ A + E S + ++V + SALIDM++KCGS++ A
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSVEGAR 378
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F R+V +S+MI+G+ +HGRA AI L+ M + PN VTF+G+L AC+H G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 303 LKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ G ++P HYAC++DLLGRAG L++A ++++ MPV+P VWGALL
Sbjct: 439 MVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+ HR+ E+ + AA LF ++P G+Y+ LSN+YA+A +WD V+ VR +K GL K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+ G SW+E RG + FR GD +HP EI++ + + RL+ G+ N + L+D++DE
Sbjct: 559 DVGCSWVEV-RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDE 617
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E + L +HSE++A+A+GL++T G +RI KNLR C +CH S+++ REIVVRD
Sbjct: 618 EAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDT 677
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 678 NRFHHFKDGVCSCGDYW 694
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 48/368 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+F R VF+ + F W A+IRGY H +D++ +Y +M+ + P SFT L KAC
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVV 120
+ + + +G+ +HAQ L GF +D++V N +I +Y KC LG +R VF+ +PER +V
Sbjct: 130 SGLSHLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT ++ AYA NG+ P EA+E F M+
Sbjct: 189 SWTAIVSAYAQNGE-------------------------------PMEALEIFSHMRKMD 217
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ D+V LV V++A L +K + G ++++ +L MY+KCG +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVAT 275
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F MK N+ +++MI G+A +G A AI +F +M+ + +P+ ++ ++AC+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 301 VG--------LKCYGVSPSTDHY---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
VG + G S D + ++D+ + G +E A ++V ++ + VW A
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSA 394
Query: 350 LLGACQIH 357
++ +H
Sbjct: 395 MIVGYGLH 402
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+LI A ++ GD+ A +F++LP W A++ GY +N ++A+ + MQ A V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T ++ AC+ L ++ +V GF +V V + LI +Y+KC + A
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA--DVFVQNGLIALYAKCRRLGSAR 174
Query: 243 RIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS- 299
+F G + +R + S+++++ +A +G A+++F M K + KP+ V + VL A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC 234
Query: 300 ----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
H + G+ D + + + G + A + +KM PN +W A
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNA 293
Query: 350 LLG 352
++
Sbjct: 294 MIS 296
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/570 (37%), Positives = 315/570 (55%), Gaps = 61/570 (10%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+F+ ++ +N L WTA+I GY +G ++++++ M G P T+ ++ AC
Sbjct: 208 LFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACA 267
Query: 64 EVLDVSLGQQIHAQTIL---------LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ S G +IHA ++ GG DL V N +I MY KC +R +
Sbjct: 268 SLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI---- 323
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEY 172
F+++PL+++ V WT M+ G+ Q +A++
Sbjct: 324 ---------------------------FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 356
Query: 173 FERM--QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F M + GV + T+ ++ ACA L I+ + + V + LI+
Sbjct: 357 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLIN 416
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG +D A +F M Q++ S++SM+ G+ MHGR A+ +F M K P+ +T
Sbjct: 417 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 476
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ VL ACSH G+ YG++P +HYA +DLL R G L++A K V+ M
Sbjct: 477 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDM 536
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P+EP VW ALL AC++H N E+A+ A N L E+ + G+Y ++SNIYA+AG W DV+
Sbjct: 537 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 596
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
R+R L+K +G+KK PG SW++G +G F GD +HP S +I L L+DR++A GY
Sbjct: 597 RIRHLMKKSGIKKRPGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 655
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P L+DV +EEK +L+ HSEKLALA+GLLTT PG +RI KNLR+C DCH
Sbjct: 656 PETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYI 715
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EIVVRD RFHHF++G CSCG YW
Sbjct: 716 SKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 196/394 (49%), Gaps = 50/394 (12%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----------RREGIGPVSF 53
++F+++ + + W +++ ++ + ++ L+ M R I
Sbjct: 66 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI----I 121
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
++ + AC + V +++H I G F D++VGN +I Y KCG + + KVF+
Sbjct: 122 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPRE 168
M +DVVSW ++ Y+ +G+ ++A LF + PL D V WTA++ GY Q E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL-DMVTWTAVIAGYSQRGCSHE 239
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIAEGSGFGPIN- 220
A+ F +M ++G + VT++ V+SACA LG Y+ C + + FG +
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+++V +ALIDMYSKC S A IF + +++RNV +++ MI G A +G ++ A++LF +
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 279 MVKTE--TKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYA-CMVDLLG 323
M+ PN T +L AC+H+ L+ + S A C++++
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G ++ A + + M + + W +++ +H
Sbjct: 420 KCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 135/274 (49%), Gaps = 40/274 (14%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R G FTL + KAC E+ G H I GF S++++ N ++ MY +CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCG 59
Query: 103 FLGCSRKVFDEMPER---DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
L + +FDE+ +R DV+SW ++ A+ + + +A LF+++ L
Sbjct: 60 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTL------------ 107
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF--G 217
+ + KP ER +D +++V ++ AC L + V G+ G
Sbjct: 108 -IVHEKPTN-----ER-------SDIISIVNILPACGSLKAVPQTKEV----HGNAIRNG 150
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
+V VG+ALID Y+KCG +++A ++F M+ ++V S+++M+ G++ G AA +LF
Sbjct: 151 TFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFK 210
Query: 278 DMVKTETKPNGVTFIGVLT-----ACSHVGLKCY 306
+M K + VT+ V+ CSH L +
Sbjct: 211 NMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT+++ GY + G +++ ++ MR+ G P T + AC+
Sbjct: 428 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 487
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G G T I + + G L + K +MP E V W
Sbjct: 488 GMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 547
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + ++E A N E+ ++ ++T + Y + ++ M+ +G+
Sbjct: 548 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 607
Query: 182 E 182
+
Sbjct: 608 K 608
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 313/552 (56%), Gaps = 73/552 (13%)
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C E + G+Q+HA+ + G+ LY+ ++ MY +CG L +R V D MPER+VVS
Sbjct: 45 CVERRALREGRQVHARMVA-AGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVS 103
Query: 122 WTELIVAYANNG------------------------------------------------ 133
WT +I Y+ N
Sbjct: 104 WTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAK 163
Query: 134 --DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+++ A +F+ LP +D V++TA+++GY Q EA++ F + G++ + VT +
Sbjct: 164 SENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTAL 223
Query: 192 ISACAQLGVIKYANWVCEI---AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
++A + L + Y V + E F + N +LIDMYSKCG + + R+F M
Sbjct: 224 LNALSGLSSMDYGKQVHGLILRRELPFFMALQN-----SLIDMYSKCGKLLYSRRVFDSM 278
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGV 308
+R+V S+++M++G+ HG AH +QLF M E KP+ VT + VL+ SH GL G+
Sbjct: 279 PERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSHGGLVDEGL 337
Query: 309 SP------------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+T+HY C++DLLGR+G L++AL ++EKMP +P +WG+LLGAC++
Sbjct: 338 DMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRV 397
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H N + + A L ++EP+ GNY+ILSNIYA+AGMW DV RVR+L+ + K PG S
Sbjct: 398 HTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRS 457
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+ D+ VIH F + + HP +I + ++ ++A G+ P+L VL+DV DE+K+R+
Sbjct: 458 WMILDK-VIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERM 516
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L+ HSEKLA+ FGL++T T+++MKNLRIC DCH F S+V GREI +RD RFH
Sbjct: 517 LLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHL 576
Query: 537 FQDGKCSCGNYW 548
+G C+CG+YW
Sbjct: 577 ITEGACTCGDYW 588
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ +TA++ GY G ++++ L+ + EG+ T +AL A + +
Sbjct: 171 RRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGL 230
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H IL + + N++I MY KCG L SR+VFD MPER VVSW +
Sbjct: 231 SSMDYGKQVHG-LILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAM 289
Query: 126 IVAYANNGDMESAGGLFNEL---PLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
++ Y +G LF + D V A+++GY E ++ F+ +
Sbjct: 290 LMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHI 343
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
I+ C + ++ V +G+ P + + + L+ MY++CG+++DA + GM +R
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPA--LYLATRLVIMYARCGALEDARNVLDGMPER 99
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPS 311
NV S+++MI G++ + R A +LF M++ + V + ++ L + S
Sbjct: 100 NVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--HQVKQVHAFAVKTNFELHMFVGSSL 157
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
D YA ++ ++EA ++ + +P L G Q+ + E
Sbjct: 158 LDMYA-------KSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEE 200
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 317/585 (54%), Gaps = 83/585 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG------------------ 49
VFE++++K+ W A++ GY G +D++SL+ MR E I
Sbjct: 288 VFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGF 347
Query: 50 -----------------PVSFTLSALFKACTEVLDVSLGQQIHAQTI--LLGGF----TS 86
P TL +L AC V + G++ H ++ +L G T
Sbjct: 348 GCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTD 407
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
DL V N +I MY KC L +R +FDE+ +D
Sbjct: 408 DLAVINALIDMYAKCKSLEVARAMFDEICPKD---------------------------- 439
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERM---QYAGVETDYVTLVGVISACAQLGVIKY 203
+D V WT M+ GY Q+ A++ F M V D+ T+ V+ ACA+L +K+
Sbjct: 440 -RDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF-TISCVLMACARLAALKF 497
Query: 204 ANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGF 263
+ + + V + LIDMYSK G +D A +F M +RN S++S++ G+
Sbjct: 498 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 557
Query: 264 AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLG 323
MHGR+ A ++F +M K +G+TF+ VL ACSH G+ +GV P +HYACMVDLLG
Sbjct: 558 GMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMD-FGVDPGVEHYACMVDLLG 616
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
RAG L EA++++ MP+EP VW ALL AC+IH N E+A+ AA L EL+ D G Y +
Sbjct: 617 RAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTL 676
Query: 384 LSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQ 443
LSNIYA+A W DV+R+ L+K TG+KK PG+SW++G +G + F GD TH S +I +
Sbjct: 677 LSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKG-METFYVGDRTHLQSQKIYE 735
Query: 444 ALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMK 503
L DL+ R++A+ L+DV DEEK L HSEKLALA+ +LT PGA +RI K
Sbjct: 736 TLADLIKRIKAN-------FSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITK 788
Query: 504 NLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
NLRIC D H + S ++ EI++RD+ RFH F++G CSC YW
Sbjct: 789 NLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 188/434 (43%), Gaps = 95/434 (21%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+ + + W LIR + ++ L+ M+ P +T +FKAC E+ + LG
Sbjct: 88 HSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGAS 147
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IH I LG F S+++V N +I MY KC + +RKVFDE+ R +
Sbjct: 148 IHGCVIRLG-FESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGIC------------- 193
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVI 192
D V W ++V+ Y P A+ F M G+ D V +V ++
Sbjct: 194 ---------------DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNIL 238
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
C LG+ V SG + +V VG+AL+DMY+KCG ++DA ++F M+ ++
Sbjct: 239 PVCGYLGLGLCGRQVHGFCVRSGL--VEDVFVGNALVDMYAKCGKMEDANKVFERMRFKD 296
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTET---------------------------- 284
V ++++M+ G++ +GR A+ LFG M + +
Sbjct: 297 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFR 356
Query: 285 -------KPNGVTFIGVLTACSHVG-------LKCYGV--------SPSTDHYA---CMV 319
+PN VT + +L+AC+ VG CY V + TD A ++
Sbjct: 357 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 416
Query: 320 DLLGRAGCLEEALKMVEKM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL--EPD 376
D+ + LE A M +++ P + + W ++G H + ANH +L E
Sbjct: 417 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGD-------ANHALQLFSEMF 469
Query: 377 KIGNYIILSNIYAS 390
KI N I+ ++ S
Sbjct: 470 KIDNCIVPNDFTIS 483
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 123 TELIVAYANNGDMESAGGLF--NELPLKDKVAW-TAMVTGYVQNAKPREAIEYFERMQYA 179
T LI Y ++ + +A L N P V W ++ + P A+ F RM+
Sbjct: 61 TNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTL 120
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D+ T V AC ++ + + GF +NV V +A+I MY KC ++
Sbjct: 121 HWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFE--SNVFVCNAVISMYGKCKAVV 178
Query: 240 DAYRIFVGMKQRNV---FSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVL 295
A ++F + R + +++S++ ++ + A+ LF +M V P+ V + +L
Sbjct: 179 HARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNIL 238
Query: 296 TACSHVGLKCYGVSPSTDHYAC--------------MVDLLGRAGCLEEALKMVEKMPVE 341
C ++GL G+ H C +VD+ + G +E+A K+ E+M +
Sbjct: 239 PVCGYLGL---GLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK 295
Query: 342 PNGGVWGALL 351
+ W A++
Sbjct: 296 -DVVTWNAMV 304
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VF+ + +N WT+L+ GY + G +D+ ++ MR+E + T + AC+
Sbjct: 536 QVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS 595
Query: 66 ---LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVS 121
V G + +A M+ + + G LG + ++ ++MP E V
Sbjct: 596 GMDFGVDPGVEHYA----------------CMVDLLGRAGRLGEAMRLINDMPIEPTPVV 639
Query: 122 WTELIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
W L+ A ++N E A EL + +T + Y + ++ M+
Sbjct: 640 WIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKR 699
Query: 179 AGVE 182
G++
Sbjct: 700 TGIK 703
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/570 (37%), Positives = 315/570 (55%), Gaps = 61/570 (10%)
Query: 8 VFEQVKYKNPFL----WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+F+ ++ +N L WTA+I GY +G ++++++ M G P T+ ++ AC
Sbjct: 315 LFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACA 374
Query: 64 EVLDVSLGQQIHAQTIL---------LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ S G +IHA ++ GG DL V N +I MY KC +R +
Sbjct: 375 SLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI---- 430
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEY 172
F+++PL+++ V WT M+ G+ Q +A++
Sbjct: 431 ---------------------------FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 463
Query: 173 FERM--QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F M + GV + T+ ++ ACA L I+ + + V + LI+
Sbjct: 464 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLIN 523
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG +D A +F M Q++ S++SM+ G+ MHGR A+ +F M K P+ +T
Sbjct: 524 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 583
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ VL ACSH G+ YG++P +HYA +DLL R G L++A K V+ M
Sbjct: 584 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDM 643
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P+EP VW ALL AC++H N E+A+ A N L E+ + G+Y ++SNIYA+AG W DV+
Sbjct: 644 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 703
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
R+R L+K +G+KK PG SW++G +G F GD +HP S +I L L+DR++A GY
Sbjct: 704 RIRHLMKKSGIKKRPGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYV 762
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P L+DV +EEK +L+ HSEKLALA+GLLTT PG +RI KNLR+C DCH
Sbjct: 763 PETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYI 822
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ EIVVRD RFHHF++G CSCG YW
Sbjct: 823 SKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 170/326 (52%), Gaps = 36/326 (11%)
Query: 7 LVFEQVKYK---NPFLWTALIRGYILQGHLKDSISLYCSM----------RREGIGPVSF 53
++F+++ + + W +++ ++ + ++ L+ M R I
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI----I 228
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
++ + AC + V +++H I G F D++VGN +I Y KCG + + KVF+
Sbjct: 229 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNM 287
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNEL-----PLKDKVAWTAMVTGYVQNAKPRE 168
M +DVVSW ++ Y+ +G+ ++A LF + PL D V WTA++ GY Q E
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL-DMVTWTAVIAGYSQRGCSHE 346
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIK-------YANWVCEIAEGSGFGPIN- 220
A+ F +M ++G + VT++ V+SACA LG Y+ C + + FG +
Sbjct: 347 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 406
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+++V +ALIDMYSKC S A IF + +++RNV +++ MI G A +G ++ A++LF +
Sbjct: 407 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 466
Query: 279 MVKTE--TKPNGVTFIGVLTACSHVG 302
M+ PN T +L AC+H+
Sbjct: 467 MISEPYGVAPNAYTISCILMACAHLA 492
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 155/313 (49%), Gaps = 40/313 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ LV E+V W LIR +I QG L +I++ C M R G FTL + KAC
Sbjct: 69 YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACG 128
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER---DVV 120
E+ G H I GF S++++ N ++ MY +CG L + +FDE+ +R DV+
Sbjct: 129 ELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 187
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW ++ A+ + + +A LF+++ L + + KP ER
Sbjct: 188 SWNSIVSAHVKSSNAWTALDLFSKMTL-------------IVHEKPTN-----ER----- 224
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSI 238
+D +++V ++ AC L + V G+ G +V VG+ALID Y+KCG +
Sbjct: 225 --SDIISIVNILPACGSLKAVPQTKEV----HGNAIRNGTFLDVFVGNALIDAYAKCGLM 278
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT-- 296
++A ++F M+ ++V S+++M+ G++ G AA +LF +M K + VT+ V+
Sbjct: 279 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGY 338
Query: 297 ---ACSHVGLKCY 306
CSH L +
Sbjct: 339 SQRGCSHEALNVF 351
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT+++ GY + G +++ ++ MR+ G P T + AC+
Sbjct: 535 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 594
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G G T I + + G L + K +MP E V W
Sbjct: 595 GMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 654
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A + ++E A N E+ ++ ++T + Y + ++ M+ +G+
Sbjct: 655 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 714
Query: 182 E 182
+
Sbjct: 715 K 715
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 311/556 (55%), Gaps = 51/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF Q+ + + +IR Y + + LY MRR G+ P + S + K+C +
Sbjct: 124 VFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISS 183
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIHA+ IL G SD + T++ +Y C
Sbjct: 184 LMGGLQIHAR-ILRDGHQSDNLLLTTLMDLYSCCD------------------------- 217
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA--GVETDY 185
E A +F+E+P D V+W +++ + N + R+A+ F+ MQ G E D
Sbjct: 218 ------KFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDD 271
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGF-GPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + ++ ACA LG +++ V E G+ G +N + ++LI MYS+CG ++ AY I
Sbjct: 272 VTCLLLLQACANLGALEFGERVHNYIEEHGYDGALN---LCNSLITMYSRCGRLEKAYSI 328
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +RNV S+S+MI GFAMHG AI+ F M + P+ T GVL+ACSH GL
Sbjct: 329 FKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLV 388
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P+ HY CMVDLLGRAG L++A +++ M ++P+ +W LLG
Sbjct: 389 DDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLG 448
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IHR+ + + HL EL+ + G+Y++L NIY+S G WD V+ +R+ +K G++ +
Sbjct: 449 ACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTS 508
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG S +E +G +HEF D+ HP + EI + L ++ +L+ GY L S L+++ EE
Sbjct: 509 PGCSTIEL-KGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEE 567
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HSEKLA+AFG+L T PG T+R+ KNLRIC DCH F S RE+V+RD
Sbjct: 568 KGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRT 627
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G+CSC YW
Sbjct: 628 RFHHFREGQCSCNGYW 643
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 304/553 (54%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N W A++ G I ++ + L+ M G P FTL ++ + C +
Sbjct: 45 VFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRA 104
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+HA +L G+ +L VG+++ MY+K G LG KV M R+VV
Sbjct: 105 SYAGKQVHAY-VLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVV------- 156
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AW ++ G QN ++ + M+ +G+ D +T
Sbjct: 157 ------------------------AWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKIT 192
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV VIS+ A+L + + AE G + V V S+LI MYSKCG ++D+ + +
Sbjct: 193 LVSVISSSAELATLFQGQQIH--AEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLD 250
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
+ + +SSMI + HGR A+ LF M + N VTF+ +L ACSH GLK
Sbjct: 251 CEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKG 310
Query: 305 ---------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YG+ P +HY C+VDLLGR+GCL+EA M+ MP+E + +W LL AC+
Sbjct: 311 MGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACR 370
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHRN ++A A + L P Y++LSNI+ASA W DVS+VR ++ +KK PG
Sbjct: 371 IHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGV 430
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SWLE V +F GD +HP S EI L +L++ ++ GY P+ +V +D EEK+
Sbjct: 431 SWLEVKNRVF-QFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKEN 489
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L+ HSEKLA+AFGL+ PG+ +R+MKNLRIC DCH+ + S + REI+VRD RFH
Sbjct: 490 SLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFH 549
Query: 536 HFQDGKCSCGNYW 548
HF+ GKCSCG+YW
Sbjct: 550 HFKHGKCSCGDYW 562
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 21/307 (6%)
Query: 97 MYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
MY K G + + F+ MP R+++S LI + +GD++SA +F+E+ ++ W AM
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
V+G +Q + F M G D TL V+ CA L YA A +
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRA-SYAGKQVH-AYVLKY 118
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+VVGS+L MY K GS+ + ++ M+ RNV +++++I G A +G + L+
Sbjct: 119 GYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLY 178
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRA 325
M + +P+ +T + V+++ + H G + + + ++ + +
Sbjct: 179 NMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKC 238
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-LEPDKIG--NYI 382
GCLE+++K + P+ +W +++ A H E A HLFE +E + +G +
Sbjct: 239 GCLEDSMKALLDCE-HPDSVLWSSMIAAYGFHGRGE----EAVHLFEQMEQEGLGGNDVT 293
Query: 383 ILSNIYA 389
LS +YA
Sbjct: 294 FLSLLYA 300
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/564 (35%), Positives = 329/564 (58%), Gaps = 33/564 (5%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R + Q +N WT+LI GY G D++ + M +G+ P + AC+++
Sbjct: 191 RRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKL 250
Query: 66 LDVSLGQQ----IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD-----EMPE 116
++ LG+ + + I + T +L V +I MY KCG + ++ VFD + PE
Sbjct: 251 KNLDLGRLLHLLVGQKRIRM---TDNLVVA--LIDMYAKCGDIAQAQAVFDAVGRGQKPE 305
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
W +I Y G ++ A LF+++ +D + + +M+TGY+ + + R+A++ F +M
Sbjct: 306 ----PWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQM 361
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ G+ D T+V +++ACA LG + + + E +V +G+AL+DMY KCG
Sbjct: 362 RRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVE--EDVYLGTALLDMYMKCG 419
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+D+A +F M +R+V ++++MI G A +G A++ F M + +P VT+I VLT
Sbjct: 420 RVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLT 479
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH L + + P +HY CM+DLL R+G L+EA+ +V+ MP++PN
Sbjct: 480 ACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNA 539
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+WG++L AC++H+N ++A+ AA HL +L P++ Y+ L NIY + W D RVR L+
Sbjct: 540 VIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLM 599
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
+ G+KK GYS + G +H+F A D +HP + EI + ++ RL++ GY P +
Sbjct: 600 EERGVKKTAGYSSITVA-GQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRI 658
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
DV +EEK++ L+ HSEK+A+AFGL++ P + I+KNLR+CEDCH + SQ+ R
Sbjct: 659 AVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNR 718
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EI+VRD RFHHF+DG CSC ++W
Sbjct: 719 EIIVRDRSRFHHFRDGACSCNDFW 742
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 174/391 (44%), Gaps = 49/391 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F+++ + FL+ +R + D + L MR G+ +FT +F+ C
Sbjct: 57 LFDRLPHSTTFLFDTALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGA 116
Query: 67 DVS--LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
L +HA + ++ V N +I MY G +R+ FDE+P +D V W
Sbjct: 117 RARAGLCLMLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWAT 176
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I G ++ A L + P ++ V+WT+++ GY + +P +A+ F M GV D
Sbjct: 177 VIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPD 236
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI------ 238
V ++G +SAC++L + + + +N+VV ALIDMY+KCG I
Sbjct: 237 EVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV--ALIDMYAKCGDIAQAQAV 294
Query: 239 --------------------------DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
D A +F M R+V +++SMI G+ GR A
Sbjct: 295 FDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDA 354
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS---------PSTDHY--ACMVDL 321
+QLF M + + + T + +LTAC+ +G +G + D Y ++D+
Sbjct: 355 LQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDM 414
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ G ++EA + +M E + W A++
Sbjct: 415 YMKCGRVDEATAVFHRMG-ERDVHTWTAMIA 444
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 317/556 (57%), Gaps = 47/556 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+++ ++ W ++ + G + ++ L+ M++EG FT+S++ AC
Sbjct: 74 ARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAA 133
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V +Q+H L S+++VG ++ +Y KCG +
Sbjct: 134 KCCVFECKQLHGFA-LKTALDSNVFVGTALLDVYAKCGLV-------------------- 172
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ A +F +P + V W++MV GYVQN EA+ F R Q G+E +
Sbjct: 173 -----------KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 221
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ +SACA + V ++ +G G +N+ V S+LIDMY+KCG I++AY +
Sbjct: 222 QFTISSALSACAARAALIEGKQVQAVSCKTGIG--SNIFVISSLIDMYAKCGIIEEAYTV 279
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F ++++NV +++++ GF+ H R+ A+ F M + PN +T+I VL+ACSH+GL
Sbjct: 280 FSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLV 339
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + VSP+ HY+CMVD+LGRAG L EA +++MP + +WG+LL
Sbjct: 340 EKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+I+RN E+A++AA HLFE+EP GN+++LSNIYA+ W++V+R R LLK + KK
Sbjct: 400 SCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKE 459
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E V H F G+ HP EI L DL+ ++ GY+ L+DV +
Sbjct: 460 RGKSWIEIKHKV-HSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 518
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLAL FG++ GA +RIMKNLRIC DCH FM AS + REI+VRD
Sbjct: 519 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 578
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSCG +W
Sbjct: 579 RFHHFKNGYCSCGEFW 594
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 50/300 (16%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G HAQ I +G +D N ++ MY KCG + +RK+FDEMP R +VSW ++ ++
Sbjct: 39 GMACHAQIIRVG-LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
NGD E A LF + MQ G T+
Sbjct: 98 QNGDCEKALVLFMQ-------------------------------MQKEGTSCSEFTVSS 126
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPI--NNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V+ ACA K + C+ G +NV VG+AL+D+Y+KCG + DA +F M
Sbjct: 127 VVCACAA----KCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECM 182
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV------- 301
+R+ ++SSM+ G+ + A+ LF + N T L+AC+
Sbjct: 183 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 242
Query: 302 ---GLKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ C G+ + + ++D+ + G +EEA + + E N +W A+L H
Sbjct: 243 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSGFSRH 301
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 308/553 (55%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ WTAL GY G +++I L+ M G+ P S+ + + AC V D
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ I + + + +V T++ +Y KCG
Sbjct: 228 LDSGEWI-VKYMEEMEMQKNSFVRTTLVNLYAKCG------------------------- 261
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ME A +F+ + KD V W+ M+ GY N+ P+E IE F +M ++ D +
Sbjct: 262 ------KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+VG +S+CA LG + W + + F + N+ + +ALIDMY+KCG++ + +F
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEF--LTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK++++ ++ I G A +G + +FG K P+G TF+G+L C H GL
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 304 -------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
C Y + + +HY CMVDL GRAG L++A +++ MP+ PN VWGALL C+
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ ++ ++A+ L LEP GNY+ LSNIY+ G WD+ + VR ++ G+KK PGY
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +HEF A D +HP S +I L DL + ++ G+ P V +DV +EEK+R
Sbjct: 554 SWIELE-GKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKER 612
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+A GL++T G +R++KNLR+C DCH M S++ REIVVRDN RFH
Sbjct: 613 VLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 536 HFQDGKCSCGNYW 548
F +G CSC +YW
Sbjct: 673 CFTNGSCSCNDYW 685
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 171/346 (49%), Gaps = 45/346 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ L+F ++ N FL+ +LI G++ +++ L+ S+R+ G+ FT + KACT
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
LG +H+ + VKCGF DV + T
Sbjct: 123 RASSRKLGIDLHS--------------------LVVKCGF------------NHDVAAMT 150
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ Y+ +G + A LF+E+P + V WTA+ +GY + + REAI+ F++M GV+
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +V V+SAC +G + W+ + E N V + L+++Y+KCG ++ A
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ--KNSFVRTTLVNLYAKCGKMEKARS 268
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F M ++++ ++S+MI G+A + I+LF M++ KP+ + +G L++C+ +G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 303 --LKCYGVSPSTDH--------YACMVDLLGRAGCLEEALKMVEKM 338
L +G+S H ++D+ + G + ++ ++M
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 42/283 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W+ +I+GY K+ I L+ M +E + P F++ +C +
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ I F ++L++ N +I MY KCG + +VF EM E+D+
Sbjct: 327 GALDLGEW-GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI------ 379
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
V A ++G +N + + F + + G+ D
Sbjct: 380 -------------------------VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 186 VTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T +G++ C G+I ++ N + + + V ++D++ + G +DDA
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCV-----YALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 242 YRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
YR+ M R N + +++ G + A + +++ E
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALE 512
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 326/556 (58%), Gaps = 51/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
VF+ + ++ W +I G+ G +++ + M + G + P SFTLS++ E +
Sbjct: 182 VFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHV 241
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
DV+ G++IH + GF D+++G+++I MY KC L CS + F
Sbjct: 242 DVNKGKEIHGYAVR-NGFDGDVFIGSSLIDMYAKCNRLECSLRAF--------------- 285
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y LP KD ++W +++ G VQN + + +F RM V+ V
Sbjct: 286 --YI--------------LPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAV 329
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ VI ACA L + + GF +N + S+L+DMY+KCG+I A +F
Sbjct: 330 SFSSVIPACAHLTALSLGRQLHGCIVRLGFD--DNEFIASSLVDMYAKCGNIKMARYVFD 387
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ +R++ +++++I+G AMHG A A+ LF +M++ +P V F+ VLTACSH GL
Sbjct: 388 RIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDE 447
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP-VEPNGGVWGALLGA 353
+ +G++P +HYA + DLLGRAG LEEA + M V+P G VW LL A
Sbjct: 448 GWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAA 507
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H++ E+A+ + L ++ + +G Y+++SNIY++A W D +R+R ++ GLKK P
Sbjct: 508 CRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTP 567
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
SW+E G++ +H F AGD +HP +I +AL LL++++ +GY + VL+DV +E
Sbjct: 568 ACSWIEVGNQ--VHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEEL 625
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSE+LA+A+G+++T+ G T+R++KN+R+C DCH + ++++GREI VRDN
Sbjct: 626 KRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNS 685
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSCG+YW
Sbjct: 686 RFHHFKNGSCSCGDYW 701
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 62/365 (16%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+++I+ Y L S S + SMR + P +L KA T + L +HA T+
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLG---------------CSRKVFDEMPERDVVSWTE 124
LG SDLY+ N +I Y K G C +KVFD MP RDVVSW
Sbjct: 138 RLG-LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VET 183
+I +A NG YV EA++ M G ++
Sbjct: 197 VIAGFAQNG-------------------------MYV------EALDMVREMGKNGKLKP 225
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TL ++ A+ + + A +GF +V +GS+LIDMY+KC ++ + R
Sbjct: 226 DSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFD--GDVFIGSSLIDMYAKCNRLECSLR 283
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH--- 300
F + +++ S++S+I G +G + F M+K KP V+F V+ AC+H
Sbjct: 284 AFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTA 343
Query: 301 --VGLKCYG--VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G + +G V D + +VD+ + G ++ A + +++ + + W A++
Sbjct: 344 LSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIM 402
Query: 353 ACQIH 357
C +H
Sbjct: 403 GCAMH 407
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+++ ++ WTA+I G + GH D++SL+ +M +G+ P A+ AC+
Sbjct: 383 RYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSH 441
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 315/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE + + + LW+ LI Y + + ++ M R + P F+LS + +AC +
Sbjct: 306 IFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAF 365
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH I LG + S+L+VGN ++ MY KC
Sbjct: 366 LELGEQIHNLAIKLG-YESELFVGNALMDMYAKCR------------------------- 399
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ME++ +F+ L ++V+W ++ GY Q+ +A+ F M+ A + + VT
Sbjct: 400 ------NMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVT 453
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA IK+A + + E S F N+ +V ++LID Y+KCG I DA ++F
Sbjct: 454 FSSVLRACANTSSIKHAVQIHSLIEKSTFN--NDTIVCNSLIDTYAKCGFIRDALKVFES 511
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ + +V S++S+I +A+HGRA A++LF M K++ K N VTF+ +L+ C GL G
Sbjct: 512 IVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG 571
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ PS +HY C+V LLGRAG L +ALK + +P P+ VW ALL +C
Sbjct: 572 LWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCV 631
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N + + AA + ++EP Y++LSN+YA+AG+ D+V+ R+ ++ G+KK G
Sbjct: 632 VHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGL 691
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E +G +H F G HP+ I L L + +GY P++ VL+DV +EEK R
Sbjct: 692 SWVE-IKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKAR 750
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LALA+GL T PG +RIMKNLR C DCH S+++ REI+VRD RFH
Sbjct: 751 MLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFH 810
Query: 536 HFQDGKCSCGNYW 548
HF++G CSCG+YW
Sbjct: 811 HFEEGICSCGDYW 823
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 172/363 (47%), Gaps = 46/363 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WTA++ Y + +++ + MR G P F L++ KA +
Sbjct: 203 RCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCL 262
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ IH ++ + ++ +VG ++ MY KCG
Sbjct: 263 SSALLGKGIHGCSVK-TLYDTEPHVGGALLDMYAKCG----------------------- 298
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D+E A +F +P D + W+ +++ Y Q+ + +A E F RM + V +
Sbjct: 299 --------DIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNE 350
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+L GV+ ACA + ++ + +A G+ + + VG+AL+DMY+KC +++++ IF
Sbjct: 351 FSLSGVLQACANIAFLELGEQIHNLAIKLGYE--SELFVGNALMDMYAKCRNMENSLEIF 408
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
++ N S++++I+G+ G A A+ +F +M VTF VL AC++
Sbjct: 409 SSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIK 468
Query: 306 YGV---------SPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ V + + D C ++D + G + +ALK+ E + VE + W +++ A
Sbjct: 469 HAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAY 527
Query: 355 QIH 357
+H
Sbjct: 528 ALH 530
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 38/300 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N + L++GY L+G ++++ L+ ++REG F L+ + K +
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L IHA L G + +VG +I Y CG + +R VFD + +D V+WT
Sbjct: 162 DAPGLACGIHACACKL-GHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWT-- 218
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AMV+ Y +N P A+ F +M+ G + +
Sbjct: 219 -----------------------------AMVSCYSENDIPEYALNTFSKMRMTGFKPNP 249
Query: 186 VTLVGVISA--CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
L + A C ++ C + P VG AL+DMY+KCG I+DA+
Sbjct: 250 FVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEP----HVGGALLDMYAKCGDIEDAHA 305
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
IF + +V +S +I +A + A ++F M+++ PN + GVL AC+++
Sbjct: 306 IFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAF 365
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 47/301 (15%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKV 110
S+ + + C D G+ +HA+ + GG D + N ++ Y K G L +R++
Sbjct: 45 SYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRL 104
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FD MPER+ VS+ L+ YA G+ E EA+
Sbjct: 105 FDGMPERNRVSFVTLMQGYALRGEFE-------------------------------EAL 133
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALI 229
E F R+Q G E ++ L ++ + A C I A G N VG+ALI
Sbjct: 134 ELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLA---CGIHACACKLGHDRNAFVGTALI 190
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
D YS CG++ A +F G+ ++ ++++M+ ++ + A+ F M T KPN
Sbjct: 191 DAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPF 250
Query: 290 TFIGVLTAC-----SHVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKM 338
L A + +G +G S T + ++D+ + G +E+A + E +
Sbjct: 251 VLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMI 310
Query: 339 P 339
P
Sbjct: 311 P 311
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 317/559 (56%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R +F+++ +N W A++ +L G +++ Y +R G P ++ A F AC
Sbjct: 173 ALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNAC 232
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ ++SLG+Q + + GF D+ V N+++ Y KC +G +R VFD M R+ VS
Sbjct: 233 AGMTNLSLGEQFYG-FVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVS- 290
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
W +MV Y QN EA + + AG E
Sbjct: 291 ------------------------------WCSMVVAYAQNGAEEEAFFVYLGARRAGEE 320
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ V++ CA L + + +A S +N+ V SAL+DMY KCG I+DA
Sbjct: 321 PTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCID--SNIFVASALVDMYGKCGGIEDAE 378
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHV 301
++F M QRN+ ++++MI G+A G AH A+ +F M+ ET PN +T + VLTACS
Sbjct: 379 QVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRG 438
Query: 302 GLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL +G+ P +HYAC+VDLL RAG E A K+++ MP+ P+ VWGA
Sbjct: 439 GLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGA 498
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLG C++H E+ +IAA LFEL+P GN+++LSN+ ASAG W + + VR+ +K G+
Sbjct: 499 LLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGI 558
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK+PG SW+ + V+H F+A D TH + EIQ L L ++QA GY P+ + LYD+
Sbjct: 559 KKDPGRSWITW-KNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLE 617
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ + HSEKLALAFGL+ PG +RIMKNLRIC DCH S + GREI+VR
Sbjct: 618 EEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVR 677
Query: 530 DNMRFHHFQDGKCSCGNYW 548
DN FHHF++ +CSC +YW
Sbjct: 678 DNNMFHHFKNYECSCKDYW 696
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 150/345 (43%), Gaps = 46/345 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSL-GQQIHAQT 78
+TA I G ++S + +M R G+ P FT + FKA S G Q+HA
Sbjct: 87 YTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALA 146
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
+ G D +V + MY K G L +R++FDEMP R+V
Sbjct: 147 LRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNV------------------- 187
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
VAW A++T V + +P E +E + ++ AG + V++ +ACA +
Sbjct: 188 ------------VAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGM 235
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ GFG +V V ++++D Y KC + A +F GM RN S+ S
Sbjct: 236 TNLSLGEQFYGFVAKCGFG--KDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCS 293
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYGVSPS 311
M++ +A +G A ++ + +P VLT C+ + L V
Sbjct: 294 MVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSC 353
Query: 312 TDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
D + +VD+ G+ G +E+A ++ +MP + N W A++G
Sbjct: 354 IDSNIFVASALVDMYGKCGGIEDAEQVFFEMP-QRNLVTWNAMIG 397
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKY-A 204
P V++TA ++G Q+A+P +A+ F M G+ + T A A
Sbjct: 80 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
+ +A G+ P ++ V A +DMY K G + A R+F M RNV ++++++
Sbjct: 140 TQLHALALRFGYLP-DDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKCYG----------VS 309
+ GR ++ + + PN V+ AC+ +G + YG VS
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
S +VD G+ C+ +A + + M V N
Sbjct: 259 VSNS----VVDFYGKCRCVGKARAVFDGMGVRNN 288
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 295/511 (57%), Gaps = 43/511 (8%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P FT + KAC + +++LG+ +H +++ GF ++ V NT++ MY C
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHG-SVMKFGFGDEVNVQNTLVHMYCCC-------- 58
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
G +E A +F+E+ D V+W+AM+ GYV+ + +A
Sbjct: 59 -------------------RGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDA 99
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
I F MQ GV D +T+V V+SAC LG ++ WV E NV + +ALI
Sbjct: 100 INLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQ--KNVELSNALI 157
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
DM++KCG +D A +F M++RN+ S++S+I G AMHGR A+ +F +MV++ P+ V
Sbjct: 158 DMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDV 217
Query: 290 TFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
FIG+L+ACSH GL K + + P +HY CMVD+L RAG ++EALK V++
Sbjct: 218 VFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQE 277
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDV 397
MP++PN VW L+ AC+ H ++ + L EP NY++LSNIYA W+
Sbjct: 278 MPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKK 337
Query: 398 SRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY 457
+R+R + M G+KK PG + +E D I+EF AGD +H S EI + + ++ ++ GY
Sbjct: 338 TRIREAMDMKGMKKIPGSTMIELD-NEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGY 396
Query: 458 QPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG 517
P VL D+ DE+K+ L HSEKLA+AF LL T PG +RI+KNLR+C+DCH
Sbjct: 397 MPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKF 456
Query: 518 ASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S++ REIVVRD RFHHF++G CSC ++W
Sbjct: 457 ISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 34/281 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF+++ + W+A+I GY+ G D+I+L+ M+ +G+ P T+ ++ ACT
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + LG+ + + + ++ + N +I M+ KCG + + +F M ER++VSWT
Sbjct: 127 GLGALELGKWVESY-VEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWT 185
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I GGL + + EA+ FE M +GV
Sbjct: 186 SVI------------GGL-------------------AMHGRGVEAVAVFEEMVRSGVTP 214
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V +G++SAC+ G++ + + F + + ++DM + G + +A +
Sbjct: 215 DDVVFIGLLSACSHSGLVDKGKRYFD-SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALK 273
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
M N + ++I HG ++ +++ E
Sbjct: 274 FVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNE 314
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 330/614 (53%), Gaps = 69/614 (11%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S R VF+ + +N WT+++RGY+ G + ++ L+ M + + + L L +
Sbjct: 101 MLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQ 160
Query: 61 A-----CTEVLDVSLGQQIHAQTILLGGF-----------------TSDLYVGNTMIGMY 98
++ D+ + + A T ++GG+ ++ M+ Y
Sbjct: 161 EGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGY 220
Query: 99 VKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK---------- 148
+ G + +RK+F+ MPER+ VSWT +++ Y ++G M A LF+ +P+K
Sbjct: 221 ARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIM 280
Query: 149 ---------------------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D W+AM+ Y + EA+ F RMQ G+ ++ +
Sbjct: 281 GFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPS 340
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L+ V+S C L + + V S F ++ V S LI MY KCG++ A ++F
Sbjct: 341 LISVLSVCVSLASLDHGKQVHAQLVRSEFD--QDLYVASVLITMYVKCGNLVRAKQVFNR 398
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
++V ++SMI G++ HG A+ +F DM + P+ VTFIGVL+ACS+ G
Sbjct: 399 FPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEG 458
Query: 303 ------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+KC Y V P +HYAC+VDLLGRA + EA+K+VEKMP+EP+ VWGALLGAC+
Sbjct: 459 LELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACR 518
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H ++A++A L +LEP G Y++LSN+YA G W DV +R +K + K PG
Sbjct: 519 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGC 578
Query: 416 SWLEGDRGVIHEFRAGDLT-HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E ++ V H F GD HP I + L L L+ GY P+ VL+DV +EEK
Sbjct: 579 SWIEVEKKV-HMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKT 637
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA+A+GLL G +R+MKNLR+C DCH + ++V GREI++RD RF
Sbjct: 638 HSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRF 697
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC +YW
Sbjct: 698 HHFKDGHCSCKDYW 711
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 10/188 (5%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N +I ++K G L +R+VFD MP+R+VVSWT ++ Y NGD+ A LF +P K+ V
Sbjct: 90 NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WT M+ G +Q + +A + F+ M E D V + +I + G + A + +
Sbjct: 150 SWTVMLGGLLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRLDEARALFDEM 205
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P NVV +A++ Y++ G +D A ++F M +RN S+++M+LG+ GR
Sbjct: 206 ------PKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMRE 259
Query: 272 AIQLFGDM 279
A LF M
Sbjct: 260 ASSLFDAM 267
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 22/267 (8%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N M+ Y + + +F++MP+R+ VSW LI + NG + A +F+ +P ++ V
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV 118
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WT+MV GYV+N EA F M + V + V L G++ Q G + A + ++
Sbjct: 119 SWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLL----QEGRVDDARKLFDMM 174
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P +VV + +I Y + G +D+A +F M +RNV ++++M+ G+A +G+
Sbjct: 175 ------PEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDV 228
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----KCYGVSPSTDHYAC--MVDLLGR 324
A +LF M + N V++ +L +H G + P C M+ G
Sbjct: 229 ARKLFEVM----PERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGL 284
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALL 351
G +++A ++ + M E + G W A++
Sbjct: 285 NGEVDKARRVFKGMK-ERDNGTWSAMI 310
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 29/260 (11%)
Query: 95 IGMYVKCGFLGCSRKVFDE--MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
I Y + G L +RKVFDE +P R V SW ++ AY A LF ++P ++ V+
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS 88
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W +++G+++N EA F+ M + + V+ ++ + G ++AE
Sbjct: 89 WNGLISGHIKNGMLSEARRVFDTMP----DRNVVSWTSMVRGYVRNG---------DVAE 135
Query: 213 GSGF---GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
P NVV + ++ + G +DDA ++F M +++V + ++MI G+ GR
Sbjct: 136 AERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRL 195
Query: 270 HAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDHYACMVDLLG- 323
A LF +M K N VT+ +++ + V K + V P + + LLG
Sbjct: 196 DEARALFDEM----PKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGY 251
Query: 324 -RAGCLEEALKMVEKMPVEP 342
+G + EA + + MPV+P
Sbjct: 252 THSGRMREASSLFDAMPVKP 271
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 309/553 (55%), Gaps = 60/553 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++K + WTA+I GY ++++L+ M+ +GI + ++ AC +
Sbjct: 495 IFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQA 554
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHAQ+ L G++ DL +GN ++ +Y +CG
Sbjct: 555 LDQGRQIHAQSCL-SGYSDDLSIGNALVSLYARCG------------------------- 588
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ A F+++ KD V+W ++V+G+ Q+ EA+ F +M AG+E + T
Sbjct: 589 ------KVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 642
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+SA A + ++ + + +G+ + V +ALI +Y+KCG+IDD
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKTGYD--SETEVSNALITLYAKCGTIDD------- 693
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
S++SMI G++ HG A++LF DM + + PN VTF+GVL+ACSHVGL G
Sbjct: 694 ------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 747
Query: 308 VS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+S P +HYAC+VDLLGR+G L A + VE+MP++P+ VW LL AC
Sbjct: 748 ISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACN 807
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N +I + AA+HL ELEP Y+++SN+YA +G WD R R+++K G+KK PG
Sbjct: 808 VHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGR 867
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D V H F AGD HP + I + L L R +GY P S+L D +K
Sbjct: 868 SWVEVDNSV-HAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDP 926
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+ HSE+LA+AFGLL+ + + + KNLR+CEDCH ++ S++ R I+VRD+ RFH
Sbjct: 927 TEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFH 986
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 987 HFKVGSCSCKDYW 999
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 66/355 (18%)
Query: 32 HLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVG 91
+L S ++ M+ EGI P FT ++ K CT + LG+QIH Q +L GF ++YV
Sbjct: 418 NLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQ-VLKTGFQFNVYVS 476
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
+ +I MY K +G ++ A +F L D V
Sbjct: 477 SVLIDMYAK-------------------------------HGKLDHALKIFRRLKENDVV 505
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WTAM+ GY Q+ K EA+ F+ MQ G+++D + ISACA + + + +
Sbjct: 506 SWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQS 565
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
SG+ +++ +G+AL+ +Y++CG + +AY F + ++ S++S++ GFA G
Sbjct: 566 CLSGYS--DDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEE 623
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLKCYGVSPSTDH------------ 314
A+ +F M K + N TF ++A ++ +G + +G+ T +
Sbjct: 624 ALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALIT 683
Query: 315 ------------YACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGAC 354
+ M+ + GC EALK+ E M V PN + +L AC
Sbjct: 684 LYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 172/416 (41%), Gaps = 84/416 (20%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S + VFE +K ++ W A+I G G+ ++++ L+C + + AC
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSAC 261
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T+V G+Q+H +L GF+S+ YV N ++ +Y + G L + ++F M +RD VS+
Sbjct: 262 TKVEFFEFGKQLHG-LVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320
Query: 123 TELIVAYANNGDMESAGGLFNELPL----------------------------------- 147
LI A G + A LF ++ L
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIK 380
Query: 148 ----KDKVAWTAMVTGYVQNAKPREAIEYF----------------ERMQYAGVETDYVT 187
D V +++ YV+ + + A E+F +MQ G+ + T
Sbjct: 381 AGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFT 440
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ C LG + +GF NV V S LIDMY+K G +D A +IF
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKTGFQF--NVYVSSVLIDMYAKHGKLDHALKIFRR 498
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+K+ +V S+++MI G+ H + A+ LF +M K + + F ++AC+
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H G S +V L R G + EA +++ + N W +L+
Sbjct: 559 RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLVS 613
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 95/447 (21%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT-EVL 66
VF+++ ++ W + +I + + L+ M + + + + + C+ +
Sbjct: 119 VFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAV 178
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+QIHA+TI GF S ++ N +I +Y K GFL ++KVF+ + RD VSW +I
Sbjct: 179 SFRFVEQIHAKTIT-SGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMI 237
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ NG E A LF ++
Sbjct: 238 SGLSQNGYEEEAMLLFCQI----------------------------------------- 256
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+SAC ++ ++ + + GF + V +AL+ +YS+ G++ A +IF
Sbjct: 257 ----VLSACTKVEFFEFGKQLHGLVLKQGFS--SETYVCNALVTLYSRSGNLSSAEQIFH 310
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M QR+ SY+S+I G A G + A+ LF M KP+ VT +L+AC+ VG
Sbjct: 311 CMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPN 370
Query: 303 ---------------------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+KC + + + + C G+ L ++ ++
Sbjct: 371 GKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCY----GQLDNLNKSFQIF 426
Query: 336 EKMPVE---PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI--ILSNIYAS 390
+M +E PN + ++L C ++ + + + + Y+ +L ++YA
Sbjct: 427 TQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLK-TGFQFNVYVSSVLIDMYAK 485
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSW 417
G D ++ R LK+N SW
Sbjct: 486 HGKLDHALKIFR-----RLKENDVVSW 507
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+ R +LI Y GD+ A +F+E+P++ W + ++ F
Sbjct: 92 LNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLF 151
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGV-IKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
RM VE D V+ C+ V ++ + SGF ++ + + LID+Y
Sbjct: 152 RRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFE--SSTFICNPLIDLY 209
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
K G + A ++F +K R+ S+ +MI G + +G A+ LF +
Sbjct: 210 FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI------------- 256
Query: 293 GVLTACSHV-----GLKCYGV----SPSTDHYAC--MVDLLGRAGCLEEALKMVEKM 338
VL+AC+ V G + +G+ S++ Y C +V L R+G L A ++ M
Sbjct: 257 -VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCM 312
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 317/557 (56%), Gaps = 54/557 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+ F + ++RG++ + ++++ Y M G+ P +FT L KAC +
Sbjct: 44 IFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPA 103
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G Q+HA + LG +D++V N++I MY KCG +G VF++M ER V SW+ LI
Sbjct: 104 VEEGMQVHAHILKLG-LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALIT 162
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A+A+ G L ++ ++ W A E+I
Sbjct: 163 AHASLGMWSDCLRLLGDMS--NEGYWRA-----------EESI----------------- 192
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSIDDAYR 243
LV V+SAC LG + V GF N NV+V ++LI+MY KCG +
Sbjct: 193 LVSVLSACTHLGALDLGRSV------HGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMC 246
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M ++N SYS MI G AMHG +++F +M++ +P+ + ++GVL ACSH GL
Sbjct: 247 LFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGL 306
Query: 304 -----KCY-------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+C+ G+ P+ HY CMVDL+GRAG ++EAL++++ MP+EPN +W +LL
Sbjct: 307 VQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLL 366
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
A ++H N + +IAA LF+L+ K +Y++LSN+YA A W+DV+R R + GL +
Sbjct: 367 SASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQ 426
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG+S +E R +H F + D HP S + + L + +L+ +GY P+ VL DV +E
Sbjct: 427 RPGFSLVEVKRK-MHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEE 485
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EKK+ L HS+KLA+A+ L+ TS G+ VRI++NLR+C DCH + S + REI VRD
Sbjct: 486 EKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDR 545
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 546 HRFHHFKDGACSCRDYW 562
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A ++ G M+ A +F ++ + M+ G+V++ EA+ ++ M GV+ D T
Sbjct: 31 ALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFT 90
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ACA+L ++ V A G N+V V ++LI MY KCG I +F
Sbjct: 91 YPTLLKACARLPAVEEGMQV--HAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQ 148
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVG 302
M +R+V S+S++I A G ++L GDM + + VL+AC+H+G
Sbjct: 149 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLG 204
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 315/558 (56%), Gaps = 51/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V +++ KN WTA+I Y GH ++++++ M R P FT + + +C
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+QIH I+ + S ++VG++++ MY K G + +R++
Sbjct: 167 SGLGLGKQIHG-LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI--------------- 210
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F LP +D V+ TA++ GY Q EA+E F R+ G+ +Y
Sbjct: 211 ----------------FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +++A + L ++ + C + P V+ S LIDMYSKCG++ A R+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRREL--PFYAVLQNS-LIDMYSKCGNLSYARRL 311
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSH--- 300
F M +R S+++M++G++ HG ++LF M + KP+ VT + VL+ CSH
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 301 --VGLKC--------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL YG P T+HY C+VD+LGRAG ++EA + +++MP +P GV G+L
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 431
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H + +I + L E+EP+ GNY+ILSN+YASAG W DV+ VR ++ +
Sbjct: 432 LGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVT 491
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW++ ++ +H F A D THP E+ + ++ +++ GY P+L VLYDV +
Sbjct: 492 KEPGRSWIQHEQ-TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDE 550
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+++L+ HSEKLAL FGL+ T G +R+ KNLRIC DCH F S+V RE+ +RD
Sbjct: 551 EQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRD 610
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH DG CSCG+YW
Sbjct: 611 KNRFHQIVDGICSCGDYW 628
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+ Y KC ++DA ++ M ++NV S+++MI ++ G + A+ +F +M++++ K
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 286 PNGVTFIGVLTACSH-----VGLKCYG--VSPSTDHY----ACMVDLLGRAGCLEEALKM 334
PN TF VLT+C +G + +G V + D + + ++D+ +AG ++EA ++
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 335 VEKMP 339
E +P
Sbjct: 211 FECLP 215
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 319/563 (56%), Gaps = 57/563 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ F+ + +K+ WT GY ++ L ++ EG+ + + ++ AC
Sbjct: 313 SYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLAC 372
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + ++IH TI G SD + NT+I +Y +CG
Sbjct: 373 RGLNCLGKIKEIHGYTIR--GGLSDPVLQNTIIDVYGECG-------------------- 410
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
I+ YA +F + KD V+WT+M++ YV N +A+E F M+ G+E
Sbjct: 411 ---IIDYAVR--------IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLE 459
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF---GPINNVVVGSALIDMYSKCGSID 239
DYVTLV ++SA L +K + GF G I+N L+DMY++CGS++
Sbjct: 460 PDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT-----LVDMYARCGSVE 514
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DAY+IF K RN+ +++MI + MHG AA++LF M + P+ +TF+ +L ACS
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574
Query: 300 HVGL-----------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL KC Y + P +HY C+VDLLGR CLEEA ++V+ M EP VW
Sbjct: 575 HSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVW 634
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
ALLGAC+IH N EI ++AA L EL+ D GNY+++SN++A+ G W DV VR +K +
Sbjct: 635 CALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGS 694
Query: 408 GLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVL 465
GL KNPG SW+E G++ IH F + D HP +I Q L + ++L+ + GY + VL
Sbjct: 695 GLTKNPGCSWIEVGNK--IHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVL 752
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++V +EEK ++L HSE+LA+A+GLL T+ G +R+ KNLR+C DCH F S+ RE
Sbjct: 753 HNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERE 812
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
++VRD RFHHF+DG CSCG++W
Sbjct: 813 LIVRDASRFHHFKDGMCSCGDFW 835
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 190/400 (47%), Gaps = 56/400 (14%)
Query: 5 PRLVFEQVKYKNPFL-WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ +N + W ++I Y G +++ L+ M + G+ ++T +A +AC
Sbjct: 112 ARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACE 171
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + LG QIHA IL G D+YV N ++ MYV+ F +MPE V+
Sbjct: 172 DSSFIKLGMQIHA-AILKSGRVLDVYVANALVAMYVR----------FGKMPEAAVI--- 217
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
F L KD V W +M+TG++QN EA+E+F +Q A ++
Sbjct: 218 ------------------FGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP 259
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+++ +I A +LG + + A +GF +N++VG+ LIDMY+KC + R
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD--SNILVGNTLIDMYAKCCCMSYGGR 317
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG-VLTACSHVG 302
F M +++ S+++ G+A + A++L + + E T IG +L AC G
Sbjct: 318 AFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL-QMEGMDVDATMIGSILLACR--G 374
Query: 303 LKCYGVSPSTDHYA------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L C G Y ++D+ G G ++ A+++ E + + + W ++
Sbjct: 375 LNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECK-DVVSWTSM 433
Query: 351 LGACQIHR---NPEIAQIAANHLFELEPDKIGNYIILSNI 387
+ +C +H N + ++ LEPD + ILS +
Sbjct: 434 I-SCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 35/299 (11%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
++F+++ ++ F W A++ GY+ G ++ +Y MR G+ S+T L KAC
Sbjct: 11 AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGI 70
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWT 123
V D+ G +IH I G S ++V N+++ +Y KC + +RK+FD M R DVVSW
Sbjct: 71 VEDLFCGAEIHGLAIKY-GCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I AY+ NG M T EA+ F M AGV T
Sbjct: 130 SIISAYSGNG----------------------MCT---------EALCLFSEMLKAGVVT 158
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T + AC IK + S G + +V V +AL+ MY + G + +A
Sbjct: 159 NTYTFAAALQACEDSSFIKLGMQIHAAILKS--GRVLDVYVANALVAMYVRFGKMPEAAV 216
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF ++ +++ +++SM+ GF +G A++ F D+ + KP+ V+ I ++ A +G
Sbjct: 217 IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG 275
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y G + A +F+++ + W AM+ GYV N + A+E + M++ GV D T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 189 VGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ AC G+++ EI +G + V V ++L+ +Y+KC I+ A ++F
Sbjct: 62 PVLLKAC---GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDR 118
Query: 248 MKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
M RN V S++S+I ++ +G A+ LF +M+K N TF L AC
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQAC 170
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY KCGS+ DA IF M +R++F++++M+ G+ +G A A++++ +M + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 291 FIGVLTACSHV-----GLKCYGVSPSTDHYAC---------MVDLLGRAGCLEEALKMVE 336
F +L AC V G + +G++ Y C +V L + + A K+ +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIK---YGCDSFVFVVNSLVALYAKCNDINGARKLFD 117
Query: 337 KMPVEPNGGVWGALLGA 353
+M V + W +++ A
Sbjct: 118 RMYVRNDVVSWNSIISA 134
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 311/556 (55%), Gaps = 51/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+K ++ W +L+ + ++ +Y M G+ P TL +L E+ +
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ IH F D+ +GN +I MY K GF+ +RKV
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKV----------------- 399
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYV 186
F LP+KD ++W +++TGY QN EAI+ + M+Y +G +
Sbjct: 400 --------------FEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQG 445
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPI--NNVVVGSALIDMYSKCGSIDDAYRI 244
T V +++A +QLG +K A G ++ V + L+DMY KCG + DA +
Sbjct: 446 TWVSILTAHSQLGALKQG----MKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSL 501
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + ++ S++++I +HG A++LF +M KP+ +TF+ +L+ACSH GL
Sbjct: 502 FYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLV 561
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ YG+ PS HY CMVDL GRAG LE+A V+ MPV P+ VWGALLG
Sbjct: 562 DEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLG 621
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+ + ++HL ++E + +G Y++LSNIYA G W+ V VR L + GLKK
Sbjct: 622 ACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKT 681
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E D+ I F G+ THP EI L +L ++++ GY P+ VL DV D+E
Sbjct: 682 PGWSSIEVDKK-IDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDE 740
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ IL +HSE+LA+AFG+++T P T++I KNLR+C DCH S++ REI+VRD+
Sbjct: 741 KENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSN 800
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 801 RFHHFKDGVCSCGDYW 816
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 183/362 (50%), Gaps = 46/362 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ W A+I G+ L G + +++ ++ MR + + S T+S+L C ++ D
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G IH I LG DL+V N +I MY K G
Sbjct: 256 IISGVLIHVYAIKLG-LEFDLFVCNALINMYAKFG------------------------- 289
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++ SA +FN++ ++D V+W +++ + QN KP A+ + +M GV D +T
Sbjct: 290 ------ELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLT 343
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV + S A+LG + + + ++++ +G+A+IDMY+K G ID A ++F G
Sbjct: 344 LVSLASVAAELGNFLSSRSIHGFVTRRCWF-LHDIALGNAIIDMYAKLGFIDSARKVFEG 402
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHV----- 301
+ ++V S++S+I G++ +G A+ AI ++ M + PN T++ +LTA S +
Sbjct: 403 LPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462
Query: 302 GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G+K +G Y C+VD+ G+ G L +AL + ++P + + W A++
Sbjct: 463 GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHG 521
Query: 356 IH 357
+H
Sbjct: 522 LH 523
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 62/355 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCS-MRREGIGPVSFTLSALFKACTE 64
RL F+Q++ K+ + W ++I Y GH ++ + + + +T + +AC
Sbjct: 95 RLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN 154
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D G+++H + LG F D+Y+ + I Y + GF+
Sbjct: 155 LDD---GRKVHCLVLKLG-FECDVYIAASFIHFYSRFGFVSL------------------ 192
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
A LF+ + ++D W AM++G+ N K EA+E F+ M++ V D
Sbjct: 193 -------------ACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMD 239
Query: 185 YVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
VT+ ++ C QL GV+ + V I G F ++ V +ALI+MY+K G +
Sbjct: 240 SVTISSLLPICVQLDDIISGVLIH---VYAIKLGLEF----DLFVCNALINMYAKFGELR 292
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A IF MK R++ S++S++ F + + A+ ++ M P+ +T + + + +
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352
Query: 300 HVG-------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+G +C+ + A ++D+ + G ++ A K+ E +PV+
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNA-IIDMYAKLGFIDSARKVFEGLPVK 406
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
R VFE + K+ W +LI GY G ++I +Y SMR G P T ++ A ++
Sbjct: 397 RKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQ 456
Query: 65 VLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G + H Q L+ F D++V ++ MY KCG L + +F E+P + VSW
Sbjct: 457 LGALKQGMKAHGQ--LIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWN 514
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I + +G GL +A++ F+ MQ GV+
Sbjct: 515 AIISCHGLHG-----YGL--------------------------KAVKLFKEMQSEGVKP 543
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D++T V ++SAC+ G++ W ++ + + +G ++ ++D++ + G ++ A+
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQET-YGIRPSLKHYGCMVDLFGRAGHLEKAFN 602
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
M R S +LG R H ++L
Sbjct: 603 FVKNMPVRPDVSVWGALLGAC---RIHENVEL 631
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 54/348 (15%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+F CT+V L +Q+HA +++ G T +++ +I Y G + +R FD++ +
Sbjct: 49 IFLYCTKV---HLAKQLHA-LLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK 104
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV +W +I AYA G +A FNE + T ++Q
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEF----------LSTSFLQ--------------- 139
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+D+ T VI AC L + + C + + G +V + ++ I YS+ G
Sbjct: 140 -----SDHYTFPPVIRACGNLDDGRKVH--CLVLK---LGFECDVYIAASFIHFYSRFGF 189
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ A +F M R++ ++++MI GF ++G+ A+++F +M + VT +L
Sbjct: 190 VSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPI 249
Query: 298 C-------SHVGLKCYGVSPST--DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
C S V + Y + D + C ++++ + G L A + +M V +
Sbjct: 250 CVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVS 308
Query: 347 WGALLGACQIHRNPEIAQIAAN--HLFELEPDKIGNYIILSNIYASAG 392
W +LL A + ++ P IA N H + PD + + L+++ A G
Sbjct: 309 WNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL-TLVSLASVAAELG 355
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/542 (36%), Positives = 317/542 (58%), Gaps = 18/542 (3%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ A+I GY+ +G ++++ + M GI FT ++ +AC + LG+Q+HA +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
F+ + N+++ +Y KCG +R +F++MP +D+VSW L+ Y ++G + A
Sbjct: 314 RREDFS--FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F E+ K+ ++W M++G +N E ++ F M+ G E G I +CA LG
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
Y N A+ G +++ G+ALI MY+KCG +++A ++F M + S++++
Sbjct: 432 A--YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I HG A+ ++ +M+K +P+ +T + VLTACSH GL Y
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P DHYA ++DLL R+G +A ++E +P +P +W ALL C++H N E+ IAA
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ LF L P+ G Y++LSN++A+ G W++V+RVR+L++ G+KK SW+E + V H
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV-HT 668
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV-SDEEKKRILMTHSEKLAL 486
F D +HP + + L DL ++ GY P+ VL+DV SD K+ +L THSEK+A+
Sbjct: 669 FLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAV 728
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AFGL+ PG T+RI KNLR C DCH F S V+ R+I++RD RFHHF++G+CSCGN
Sbjct: 729 AFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGN 788
Query: 547 YW 548
+W
Sbjct: 789 FW 790
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 195/443 (44%), Gaps = 54/443 (12%)
Query: 3 SFPRLVFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+ R VFE+ V ++ ++ A+I G+ +I+L+C M+ EG P +FT +++
Sbjct: 97 TLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 61 ACTEVLDVSLG-QQIHAQTILLG-GFTSDLYVGNTMIGMYVKCG----FLGCSRKVFDEM 114
V D Q HA + G G+ + V N ++ +Y KC L +RKVFDE+
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK-VAWTAMVTGYVQNAKPREAIEYF 173
E+D SWT ++ Y NG + L + K VA+ AM++GYV +EA+E
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFG--------------- 217
RM +G+E D T VI ACA G+++ V + F
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCG 334
Query: 218 ------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
P ++V +AL+ Y G I +A IF MK++N+ S+ MI G A
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC-----------YGVSPSTDH 314
+G ++LF M + +P F G + +C+ +G C G S
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA 454
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-- 372
++ + + G +EEA ++ MP + W AL+ A H + A + +
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 373 LEPDKIGNYIILSNIYASAGMWD 395
+ PD+I +L+ + AG+ D
Sbjct: 514 IRPDRITLLTVLTAC-SHAGLVD 535
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 46/281 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F+++K KN W +I G G ++ + L+ M+REG P + S K+C +
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
GQQ HAQ + + GF S L GN +I MY KCG + +R+VF MP D VSW L
Sbjct: 431 GAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G EA++ +E M G+ D
Sbjct: 490 IAALGQHG-------------------------------HGAEAVDVYEEMLKKGIRPDR 518
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGSIDDA 241
+TL+ V++AC+ G++ + E + + G + LID+ + G DA
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSME-----TVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 242 YRIFVGMKQRNVFS-YSSMILGFAMHGRAH----AAIQLFG 277
+ + + + +++ G +HG AA +LFG
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 151/336 (44%), Gaps = 59/336 (17%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L + +H I G F ++ N +I +Y K L +R++FDE+ E D ++ T ++
Sbjct: 30 LQLARAVHGNIITFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 128 AYANNGDMESAGGLFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
Y +GD+ A G+F + P ++D V + AM+TG+ N AI F +M++ G + D
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 186 VTLVGVISACAQLGVIKYANWVC----EIAEGSGFGPINNVVVGSALIDMYSKCGS---- 237
T V+ A L ++ C A SG G I + V +AL+ +YSKC S
Sbjct: 149 FTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITS--VSNALVSVYSKCASSPSL 203
Query: 238 IDDAYRIFVGMKQRN--------------------------------VFSYSSMILGFAM 265
+ A ++F + +++ + +Y++MI G+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------VSPSTD---HY- 315
G A+++ MV + + + T+ V+ AC+ GL G V D H+
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+V L + G +EA + EKMP + + W ALL
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALL 358
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/557 (37%), Positives = 318/557 (57%), Gaps = 54/557 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+ F + ++RG++ + ++++ Y M G+ P +FT L KAC +
Sbjct: 87 IFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPA 146
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G Q+HA + LG +D++V N++I MY KCG +G VF++M ER V SW+ LI
Sbjct: 147 VEEGMQVHAHILKLG-LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALIT 205
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A+A+ G L ++ ++ W A E+I
Sbjct: 206 AHASLGMWSDCLRLLGDMS--NEGYWRA-----------EESI----------------- 235
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSIDDAYR 243
LV V+SAC LG + V GF N NV+V ++LI+MY KCGS+
Sbjct: 236 LVSVLSACTHLGALDLGRSV------HGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMC 289
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M ++N SYS MI G AMHG +++F +M++ +P+ + ++GVL ACSH GL
Sbjct: 290 LFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGL 349
Query: 304 -----KCY-------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+C+ G+ P+ HY CMVDL+GRAG ++EAL++++ MP+EPN +W +LL
Sbjct: 350 VQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLL 409
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
A ++H N + +IAA LF+L+ K +Y++LSN+YA A W+DV++ R + GL +
Sbjct: 410 SASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQ 469
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG+S +E R +H F + D HP S + + L + +L+ +GY P+ VL DV +E
Sbjct: 470 RPGFSLVEVKRK-MHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEE 528
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EKK+ L HS+KLA+A+ L+ TS G+ +RI++NLR+C DCH + S + REI VRD
Sbjct: 529 EKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDR 588
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 589 HRFHHFKDGACSCRDYW 605
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A ++ G M+ A +F ++ + M+ G+V++ EA+ ++ M GV+ D T
Sbjct: 74 ALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFT 133
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ACA+L ++ V A G N+V V ++LI MY KCG I +F
Sbjct: 134 YPTLLKACARLPAVEEGMQV--HAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQ 191
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVG 302
M +R+V S+S++I A G ++L GDM + + VL+AC+H+G
Sbjct: 192 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLG 247
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 312/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G I ++ + L+ M G P F L ++ + C +
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H + GF +L V +++ MY+KCG LG ++ MP ++VV
Sbjct: 198 RALVAGRQVHGY-VRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVV----- 251
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AW ++ G QN P E ++ + M+ AG D
Sbjct: 252 --------------------------AWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDK 285
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V VIS+C++L + + +G I +V+ S+LI MYS+CG ++ + ++F
Sbjct: 286 ITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI--SSLISMYSRCGCLEYSLKVF 343
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
+ + +V +SSMI + HGR AI LF M + + + N VTF+ +L ACSH GLK
Sbjct: 344 LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKE 403
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YGV P +HY CMVDLLGR G +EEA ++ MPV+ + W LL A
Sbjct: 404 KGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH+ E+A+ + +F L+P Y++LSNI+AS WDDVS VR+ ++ LKK P
Sbjct: 464 CKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEP 523
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SWLE + IH+F GD +HP S EI L +L ++ GY P++ SVL+D+ E+K
Sbjct: 524 GISWLEV-KNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDK 582
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L+ HSEKLA+AF LL T G +R++KNLR+C DCH+ + S++ REI+VRD+ R
Sbjct: 583 EYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSR 642
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G+CSCG+YW
Sbjct: 643 FHHFKNGRCSCGDYW 657
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 179/384 (46%), Gaps = 24/384 (6%)
Query: 21 TALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTIL 80
TA +GHLK + + S I S L ++C +SLG+Q+H+ I+
Sbjct: 25 TAEFTNLCSKGHLKQAFDRFSSH----IWSEPSLFSHLLQSCISENSLSLGKQLHS-LII 79
Query: 81 LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGG 140
G +SD ++ N ++ +Y KCG L + +F MP ++++S LI Y +GD +A
Sbjct: 80 TSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARK 139
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
+F+E+P ++ W AMV G +Q E + F RM G D L V+ CA L
Sbjct: 140 MFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRA 199
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+ V GF N+VV S+L MY KCGS+ + R+ M +NV +++++I
Sbjct: 200 LVAGRQVHGYVRKCGFE--FNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLI 257
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVS 309
G A +G + + M +P+ +TF+ V+++CS H + G S
Sbjct: 258 AGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGAS 317
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV--WGALLGACQIHRNPEIAQIAA 367
+ ++ + R GCLE +LK+ + NG V W +++ A H + I
Sbjct: 318 LIVSVISSLISMYSRCGCLEYSLKVFLEC---ENGDVVCWSSMIAAYGFH-GRGVEAIDL 373
Query: 368 NHLFELEPDKIGNYIILSNIYASA 391
+ E E + + LS +YA +
Sbjct: 374 FNQMEQEKLEANDVTFLSLLYACS 397
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 320/557 (57%), Gaps = 51/557 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A+I GY G+ +++ + MR EG+ + T++++ C +V
Sbjct: 49 RKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQV 108
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ G+ IH I G +L+V N +I MY K G LG ++KVF
Sbjct: 109 GDILSGKLIHLYVIK-HGLEFELFVSNALINMYAKFGSLGHAQKVFG------------- 154
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
L +KD V+W ++TGY QN EAIE + M+ + + +
Sbjct: 155 -------------------LLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPN 195
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T V ++ A + +G ++ + ++ + + ++V VG+ LIDMY KCG +DDA
Sbjct: 196 QGTWVSILPAYSHVGALQQGMRIHGQVIKNCLY---SDVFVGTCLIDMYGKCGKLDDAIS 252
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F + ++N +++MI + +HG A++LF +M KP+ +TF+ +L+ACSH GL
Sbjct: 253 LFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGL 312
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG+ PS HY CMVDL GRAG LE A ++KMP++P+ WGALL
Sbjct: 313 VSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALL 372
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH N E+ + A+ LFE++ + +G Y++LSNIYA+ G W+ V VR L + GL+K
Sbjct: 373 NACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRK 432
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
NPG+S + + V F G+ THP EI + L DL +++ GY P+ VL DV ++
Sbjct: 433 NPGWSSIILNNKV-DVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEED 491
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ ILM HSE+LA+A+G+++TSP +RI KNLR+C DCH S + REI+VRD+
Sbjct: 492 EKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDS 551
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG+YW
Sbjct: 552 SRFHHFKGGTCSCGDYW 568
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 55/320 (17%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ KAC ++LD G++IH + LG F D++V +++ MY + G +G +RK
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLG-FEWDVFVAASLVHMYSRFGLVGDARK-------- 50
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
LF+++P +D+ +W AM++GY QN EA++ + M+
Sbjct: 51 -----------------------LFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMR 87
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKC 235
GV+ D +T+ V+ CAQ+G I + I G F + V +ALI+MY+K
Sbjct: 88 LEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF----ELFVSNALINMYAKF 143
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGV 294
GS+ A ++F G+ ++V S++++I G+A +G A AI+++ M + E PN T++ +
Sbjct: 144 GSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSI 202
Query: 295 LTACSHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPN 343
L A SHV G++ +G Y+ C++D+ G+ G L++A+ + ++P N
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVP-RKN 261
Query: 344 GGVWGALLGACQIHRNPEIA 363
W A++ +H + E A
Sbjct: 262 SVPWNAMISCYGVHGDGEKA 281
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 311/557 (55%), Gaps = 47/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF+++ ++ W +I G +++ L M+REG FT+S++ AC
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+S Q +HA I +++V ++ +Y KCG
Sbjct: 177 AKCALSECQLLHAFAIK-AAMDLNVFVATALLDVYAKCGL-------------------- 215
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
M+ A +F +P + V W++M GYVQN +A+ F + G++
Sbjct: 216 -----------MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKH 264
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + VI ACA L + V + SGF +N+ V S+LIDMY+KCG I+++Y+
Sbjct: 265 DQFLMSSVICACAGLAAMIEGKQVNALLSKSGF--CSNIFVASSLIDMYAKCGGIEESYK 322
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F +++RNV +++MI G + H R+ + LF M + PN VTF+ VL+AC H+GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K + ++P+ HY+CMVD L RAG + EA ++ K+P + +WG+LL
Sbjct: 383 VKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C+ H N E+A++AA LF++EP GNY++LSN+YA+ G WD+V+++R+LLK + +KK
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKK 502
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+E + +H F G+ HP EI L +++D LQ GY+ + L+ V +
Sbjct: 503 ERGKSWIE-IKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGES 561
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA GLL P A +RIMKNLRIC DCH FM AS+ R+++VRD
Sbjct: 562 IKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDT 621
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSCG++W
Sbjct: 622 NRFHHFKNGCCSCGDFW 638
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 308/547 (56%), Gaps = 52/547 (9%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N WTA+I GY+ G +++L+C MRREG+ P FT S + A V QI
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQI 414
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA + VK + E T L +Y+ GD
Sbjct: 415 HA--------------------LVVKTNY------------ENSPSVGTALSDSYSKIGD 442
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
A +F + KD VAW+AM++GY Q A++ F ++ GVE + T V++A
Sbjct: 443 ANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNA 502
Query: 195 CAQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
CA ++ + SGF N + V SAL+ MY+K G+I+ A +F R++
Sbjct: 503 CAAPTASVEQGKQFHSCSIKSGFS--NALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 560
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---------- 303
S++SMI G+A HG ++++F +M + +G+TFIGV++AC+H GL
Sbjct: 561 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 620
Query: 304 --KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
K Y + P+ +HY+CMVDL RAG LE+A+ ++ KMP +W LL AC++H N +
Sbjct: 621 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 680
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+ ++AA L L+P Y++LSNIYA+AG W + ++VR+L+ M +KK GYSW+E
Sbjct: 681 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEV- 739
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
+ F AGDL+HP S I L +L RL+ GY P+ + VL+DV +E K+ IL HS
Sbjct: 740 KNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHS 799
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
E+LA+AFGL+ T PG ++I+KNLR+C DCH + S++ GR+IVVRD+ RFHHF+ G
Sbjct: 800 ERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGS 859
Query: 542 CSCGNYW 548
CSCG+YW
Sbjct: 860 CSCGDYW 866
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 167/356 (46%), Gaps = 51/356 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++++ KN WT+L+ GY G + ++ L+ M+ EGI P FT +A+
Sbjct: 149 VFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGA 208
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G Q+H ++ G S ++VGN+M+ MY K + ++ VFD M R+ VSW
Sbjct: 209 VEKGVQVHTM-VIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWN---- 263
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+M+ G+V N EA E F RM+ GV+
Sbjct: 264 ---------------------------SMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTI 296
Query: 188 LVGVISACAQLGVIKYANWV-CE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VI CA + + +A + C+ I GS F ++ + +AL+ YSKC IDDA+++F
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDF----DLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 246 VGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
M +NV S++++I G+ +GR A+ LF M + +PN T+ +LTA + V
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS 412
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
Y SPS + D + G EA K+ E + E + W A+L
Sbjct: 413 QIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAML 465
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 39/300 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S + VF+ ++ +N W ++I G++ G ++ L+ MR EG+ + + K
Sbjct: 243 MVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIK 302
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C + ++S +Q+H Q I G SD D+
Sbjct: 303 LCANIKEMSFAKQLHCQVIKNG---SDF-----------------------------DLN 330
Query: 121 SWTELIVAYANNGDMESAGGLFNELP-LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
T L+VAY+ +++ A LF + +++ V+WTA+++GYVQN + A+ F +M+
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
GV ++ T +++A A + + V + N+ VG+AL D YSK G +
Sbjct: 391 GVRPNHFTYSTILTANAAVSPSQIHALVVKTNYE------NSPSVGTALSDSYSKIGDAN 444
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+A +IF + ++++ ++S+M+ G+A G A+++F + K +PN TF VL AC+
Sbjct: 445 EAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACA 504
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 34/268 (12%)
Query: 34 KDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
K++++L+ +RR G +LS + K C + D +G+Q+H Q I G F D+ VG +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCG-FVEDVSVGTS 132
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY+K + +VFDEM ++VVSWT L+ Y NG NE
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG--------LNE--------- 175
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+A++ F +MQ G++ + T V+ A G ++ V +
Sbjct: 176 --------------QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
SG + + VG+++++MYSK + DA +F M+ RN S++SMI GF +G A
Sbjct: 222 SGLD--STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAF 279
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHV 301
+LF M K F V+ C+++
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANI 307
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 34/242 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
+FE + K+ W+A++ GY G ++ ++ ++ + +EG+ P FT S++ AC
Sbjct: 449 IFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTA 508
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+Q H+ +I GF++ L V + ++ MY K G + + +VF +RD+VSW +I
Sbjct: 509 SVEQGKQFHSCSIK-SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMI 567
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+GY Q+ +++++ FE M+ +E D +
Sbjct: 568 -------------------------------SGYAQHGCGKKSLKIFEEMRSKNLELDGI 596
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +GVISAC G++ ++ + + + S ++D+YS+ G ++ A +
Sbjct: 597 TFIGVISACTHAGLVNEGQRYFDLMV-KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 655
Query: 247 GM 248
M
Sbjct: 656 KM 657
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
LF+E P + ++ + +N + +EA+ F ++ +G TD +L V+ C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 201 IKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
V C+ + G + +V VG++L+DMY K S++D R+F M+ +NV S++S+
Sbjct: 108 RIVGKQVHCQCIKC---GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST 312
+ G+ +G A++LF M KPN TF VL + G GV T
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 316/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE++ +N W A++ ++ G ++ Y +R G P ++ A F AC
Sbjct: 169 RRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGA 228
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +SLG+Q H ++ GF D+ V N M+ Y KC G +R VFD M R+ VS
Sbjct: 229 MFLSLGEQFHG-FVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVS---- 283
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +M+ Y Q+ +A+ + + G E
Sbjct: 284 ---------------------------WCSMIVAYAQHGAEEDALAVYMGARNTGEEPTD 316
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ V++ CA L + + + +A S N+ V SAL+DMY KCG ++DA ++F
Sbjct: 317 FMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDA--NIFVASALVDMYGKCGGVEDAEQVF 374
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGL- 303
+ M +RN+ ++++MI G+A G A A+ +F M+++ T PN +T + V+TACS GL
Sbjct: 375 LDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLT 434
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +GV P T+HYAC+VDLLGRAG E A +++++MP+ P+ VWGALLG
Sbjct: 435 KDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLG 494
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H E+ +IA+ LFEL+P GN+++LSN+ ASAG W + + VR+ +K G+KK
Sbjct: 495 ACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKE 554
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+ + V+H F A D H ++EIQ L L ++QA GY P+ + LYDV +EE
Sbjct: 555 PGCSWITW-KNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEE 613
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSEKLALAFGL+ P +RI KNLRIC DCH S ++GREI+VRDN
Sbjct: 614 KETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNN 673
Query: 533 RFHHFQDGKCSCGNYW 548
RFH+F+ +CSC +YW
Sbjct: 674 RFHYFKQFECSCKDYW 689
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 149/346 (43%), Gaps = 47/346 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA--CTEVLDVSLGQQIHAQ 77
+TA I G ++S + +M R G+ P FT + FKA C ++G QIHA
Sbjct: 79 FTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHAL 138
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ G D +V + MY K G LG +R++F+EM
Sbjct: 139 ALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEM----------------------- 175
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
P ++ +AW A++T V + +P E + + ++ AG + V++ +ACA
Sbjct: 176 --------PNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAG 227
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ GF +V V +A++D Y KC A +F GM+ RN S+
Sbjct: 228 AMFLSLGEQFHGFVVTCGFD--MDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWC 285
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYGVSP 310
SMI+ +A HG A+ ++ T +P VLT C+ + L V
Sbjct: 286 SMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRS 345
Query: 311 STDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
D + +VD+ G+ G +E+A ++ MP E N W A++G
Sbjct: 346 CIDANIFVASALVDMYGKCGGVEDAEQVFLDMP-ERNLVTWNAMIG 390
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 15/226 (6%)
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI--SACAQLGVIKYANWVC 208
V++TA ++G Q+A+P A+ F M G+ + T +ACA +
Sbjct: 77 VSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIH 136
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+A G+ P + V A +DMY K G + A R+F M RNV ++++++ + GR
Sbjct: 137 ALALRFGYLP-GDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYAC 317
+ + + + PN V+ AC+ H + G
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
MVD G+ C +A + + M V N W +++ A H E A
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVR-NSVSWCSMIVAYAQHGAEEDA 300
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+++YSK A V S+++ I G A H R AA+ F M++ +PN
Sbjct: 51 LVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPN 110
Query: 288 GVTFIGVLTA-------CSHVGLKC------YGVSPSTDHYAC-MVDLLGRAGCLEEALK 333
TF A CS VG + +G P +C +D+ + GCL A +
Sbjct: 111 DFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARR 170
Query: 334 MVEKMPVEPNGGVWGALLGACQIHRNP 360
+ E+MP N W A++ I P
Sbjct: 171 LFEEMP-NRNVIAWNAVMTNAVIDGRP 196
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 331/554 (59%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKACTEVL 66
VFE + +N W+AL+ G++L G + ++ SL+ M +G+ +S T +++ +AC +
Sbjct: 290 VFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLS 349
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ LG+Q+HA + G +DL GN+++ MY K G +
Sbjct: 350 DLCLGKQLHA-LLAKSGLHTDLTAGNSLLSMYAKAGLI---------------------- 386
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ A LF+++ +KD V+++A+V+GYVQN K EA F +MQ V+ D
Sbjct: 387 ---------DQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVA 437
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +I AC+ L +++ C G + + +ALIDMY+KCG ID + +IF
Sbjct: 438 TMVSLIPACSHLAALQHGK--CGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC- 305
M R++ S+++MI G+ +HG A LF DM +P+ VTFI +++ACSH GL
Sbjct: 496 VMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555
Query: 306 -----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG++P +HY MVDLL R G L+EA + ++ MP++ + VWGALLGAC
Sbjct: 556 GKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N ++ + ++ + +L P+ GN+++LSNI+++AG +D+ + VR + K G KK+PG
Sbjct: 616 RVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPG 675
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + G +H F GD +H S+EI Q L ++L + GY+ + VL DV +EEK+
Sbjct: 676 CSWIEIN-GSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKE 734
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L+ HSEKLA+AFG+LT S T+ + KNLR+C DCH + + V R I+VRD RF
Sbjct: 735 KALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRF 794
Query: 535 HHFQDGKCSCGNYW 548
HHF++G+CSCG++W
Sbjct: 795 HHFKNGQCSCGDFW 808
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 61/360 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F+Q+ + ALIR Y L+G RR P ++T + KAC
Sbjct: 80 SLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKAC 139
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ +LD+ + +H G +DL+V ++ +Y KC
Sbjct: 140 SALLDLRSARAVHCHAAR-AGLHADLFVSTALVDVYAKCA-------------------- 178
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A +F +P +D VAW AM+ GY + K + I MQ
Sbjct: 179 -----------SFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ-DDHA 226
Query: 183 TDYVTLVGVISACAQLGVIK-------YANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ TLV ++ AQ G + Y+ C + + + V+VG+AL+DMY+KC
Sbjct: 227 PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHK-----DGVLVGTALLDMYAKC 281
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---TKPNGVTFI 292
G + A R+F M RN ++S+++ GF + GR A LF DM+ P V
Sbjct: 282 GHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA-- 339
Query: 293 GVLTACSHVGLKCYG------VSPS---TDHYA--CMVDLLGRAGCLEEALKMVEKMPVE 341
L AC+++ C G ++ S TD A ++ + +AG +++A + ++M V+
Sbjct: 340 SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK 399
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W +I GY + G K++ +L+ M+ + P T L AC+
Sbjct: 491 RQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHS 550
Query: 66 LDVSLGQQIHAQTILLGGFTSDL--YVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSW 122
V+ G++ G T + Y+G M+ + + GFL + + MP + DV W
Sbjct: 551 GLVTEGKRWFHMMAHKYGITPRMEHYIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVW 608
Query: 123 TELIVA 128
L+ A
Sbjct: 609 GALLGA 614
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 330/553 (59%), Gaps = 28/553 (5%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W ++ G+ G+ K+++ ++ M G P T+S++ + + ++++G+QIH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
I G D V + M+ MY K G + K+FDE + I + NG +
Sbjct: 276 GYVIK-QGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334
Query: 136 ESA---GGLFNELPLK-DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ A GLF E ++ + V+WT+++ G QN K EA+E F MQ AGV+ + VT+ +
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGP----INNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ AC + + + GF +++V VGSALIDMY+KCG I + +F
Sbjct: 395 LPACGNIAALGHGR------STHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNM 448
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +N+ ++S++ G++MHG+A + +F +++T KP+ ++F +L+AC VGL
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY+CMV+LLGRAG L+EA +++++P EP+ VWGALL +C+
Sbjct: 509 WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCR 568
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ N ++A+IAA LF LEP+ G Y+++SNIYA+ GMW +V +R ++ GLKKNPG
Sbjct: 569 LQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ + ++ A D +HP +I + + ++ + ++ G++PNL L DV ++E+++
Sbjct: 629 SWIQV-KNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQ 687
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+ FGLL T G ++++KNLRIC DCH + S GREI +RD RFH
Sbjct: 688 MLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG++W
Sbjct: 748 HFKDGICSCGDFW 760
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 193/433 (44%), Gaps = 60/433 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L+ + + + +++LI SI ++ M G+ P + L LFK C E+
Sbjct: 71 LILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELS 130
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
G+QIH + G D +V ++ MY++CG +G +RKVFD M E+DVV+ + L+
Sbjct: 131 AFKAGKQIHC-VACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALL 189
Query: 127 VAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
YA G +E + +E+ + V+W +++G+ ++ +EA+ F++M + G
Sbjct: 190 CGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFC 249
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS----- 237
D VT+ V+ + + + G + + V SA++DMY K G
Sbjct: 250 PDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGL--LKDKCVISAMLDMYGKSGHVYGII 307
Query: 238 --------------------------IDDAYRIFVGMKQR----NVFSYSSMILGFAMHG 267
+D A +F K++ NV S++S+I G A +G
Sbjct: 308 KLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNG 367
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA----------- 316
+ A++LF +M KPN VT +L AC ++ +G ST +A
Sbjct: 368 KDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHG--RSTHGFAVRVHLLDDVHV 425
Query: 317 --CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAANHL-FE 372
++D+ + G ++ + + MP + N W +L+ +H + E+ I + +
Sbjct: 426 GSALIDMYAKCGRIKMSQIVFNMMPTK-NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR 484
Query: 373 LEPDKIGNYIILS 385
L+PD I +LS
Sbjct: 485 LKPDFISFTSLLS 497
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+LI +Y+N A + +P ++++++ + ++I F RM G+
Sbjct: 54 AKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLI 113
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D L + CA+L K + +A SG + V +L MY +CG + DA
Sbjct: 114 PDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLD--MDAFVQGSLFHMYMRCGRMGDAR 171
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M +++V + S+++ G+A G +++ +M K+ +PN V++ G+L+ + G
Sbjct: 172 KVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSG 231
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VF + KN W +L+ GY + G K+ +S++ S+ R + P + ++L AC +V
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
G + G L + M+ + + G L + + E+P E D W
Sbjct: 503 GLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGA 562
Query: 125 LIVA--YANNGDME--SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
L+ + NN D+ +A LF+ P ++ + M Y E +M+ G
Sbjct: 563 LLNSCRLQNNVDLAEIAAQKLFHLEP-ENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 181 VETD 184
++ +
Sbjct: 622 LKKN 625
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 332/562 (59%), Gaps = 55/562 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC--T 63
R VF++ + + ++W AL R L G+ ++ + LY M R G+ FT + + KAC +
Sbjct: 133 RKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVAS 192
Query: 64 EVLDVSL---GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
E VSL G++IH IL GF +++ T++ MY + GC
Sbjct: 193 EAF-VSLLLNGREIHGH-ILRHGFEGHVHIMTTLLDMYAR---FGC-------------- 233
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ +A +F+++P+K+ V+W+AM+ Y +N KP EA+E F +M
Sbjct: 234 --------------VLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLEN 279
Query: 181 VE--TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + VT+V V+ ACA L ++ + G I VV SAL+ +Y++CG++
Sbjct: 280 QDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVV--SALVTVYARCGNL 337
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ +R+F M++R+V S++S+I + +HG AIQ+F +M+ P+ ++F+ VL AC
Sbjct: 338 ELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGAC 397
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL + + + PS +HYACMVDLLGRA L+EA K+++ M +EP V
Sbjct: 398 SHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKV 457
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WG+LLG+C+IH N E+A+ A + LFELEP GNY++L++IYA A MW++V RV+ LL+
Sbjct: 458 WGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEA 517
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
GL+K PG S +E R I+ F + D +P ++ L L ++ GY P+ + VLY
Sbjct: 518 RGLQKVPGRSCIEIRRK-IYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLY 576
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ EEK+RI++ HSEKLALAFGL+ + G T+RI KNLR+CEDCH S+ REI
Sbjct: 577 DLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREI 636
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD RFH FQDG CSCG+YW
Sbjct: 637 LVRDVNRFHLFQDGVCSCGDYW 658
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 56/352 (15%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
LI+ QG+L ++ + + P T L +CT + G +H + ++
Sbjct: 53 LIQSLCKQGNLNQALQVLS----QEPNPTQHTYELLILSCTRQNSLPQGIDLH-RHLIHD 107
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G D ++ +I MY + + +RKVFD+ +R + W LF
Sbjct: 108 GSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVW----------------NALF 151
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
L L GY RE ++ + RM GV +D T V+ AC +
Sbjct: 152 RALTL----------AGY-----GREVLDLYRRMNRIGVPSDRFTYTYVLKAC--VASEA 194
Query: 203 YANWVCEIAEGSG----FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + + E G G +V + + L+DMY++ G + +A R+F M +NV S+S+
Sbjct: 195 FVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSA 254
Query: 259 MILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACS-----------HVGLKC 305
MI ++ +G+ A++LF M+ + PN VT + VL AC+ H +
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G+ + +V + R G LE ++ E+M + + W +L+ + IH
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERME-KRDVVSWNSLISSYGIH 365
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 314/554 (56%), Gaps = 47/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W ++I+ Y L +ISL+ MR I P TL +L +++ D
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + + T+ G F D+ +GN ++ MY K G +
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV----------------------- 400
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYV 186
+SA +FN LP D ++W +++GY QN EAIE + M+ G + +
Sbjct: 401 --------DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V V+ AC+Q G ++ + +G +V V ++L DMY KCG ++DA +F
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGL--YLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ + N ++++I HG A+ LF +M+ KP+ +TF+ +L+ACSH GL
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG++PS HY CMVD+ GRAG LE ALK ++ M ++P+ +WGALL AC
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N ++ +IA+ HLFE+EP+ +G +++LSN+YASAG W+ V +R + GL+K PG
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
+S +E D V F G+ THP E+ + L L +L+ GY P+ R VL DV D+EK+
Sbjct: 691 WSSMEVDNKV-EVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKE 749
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
ILM+HSE+LA+AF L+ T T+RI KNLR+C DCH S++ REI+VRD+ RF
Sbjct: 750 HILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRF 809
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSCG+YW
Sbjct: 810 HHFKNGVCSCGDYW 823
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 198/408 (48%), Gaps = 59/408 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+++ ++ W A+I GY G+ K++++L +R S T+ +L ACTE
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEA 260
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D + G IH+ +I G S+L+V N +I +Y + G L +KV
Sbjct: 261 GDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKV--------------- 304
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ + ++D ++W +++ Y N +P AI F+ M+ + ++ D
Sbjct: 305 ----------------FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGP---INNVVVGSALIDMYSKCGSIDDAY 242
+TL+ + S +QLG I+ C +G + ++ +G+A++ MY+K G +D A
Sbjct: 349 LTLISLASILSQLGDIR----ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHV 301
+F + +V S++++I G+A +G A AI+++ M + E N T++ VL ACS
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 302 -----GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G+K +G Y + D+ G+ G LE+AL + ++P N W L
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTL 523
Query: 351 LGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDD 396
+ H + E A + + + ++PD I ++ L + + +G+ D+
Sbjct: 524 IACHGFHGHGEKAVMLFKEMLDEGVKPDHI-TFVTLLSACSHSGLVDE 570
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 25/283 (8%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER-MQYAGVE 182
+L+ Y G++ A F+ + +D AW M++GY + E I F M +G+
Sbjct: 91 KLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT 150
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
DY T V+ AC VI C + FG + +V V ++LI +YS+ ++ +A
Sbjct: 151 PDYRTFPSVLKACRT--VIDGNKIHCLALK---FGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M R++ S+++MI G+ G A A+ L + ++ VT + +L+AC+ G
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS----VTVVSLLSACTEAG 261
Query: 303 LKCYGV---SPSTDH--------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
GV S S H ++DL G L + K+ ++M V + W +++
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSII 320
Query: 352 GACQIHRNP--EIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
A +++ P I+ L ++PD + I L++I + G
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCL-TLISLASILSQLG 362
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 332/558 (59%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKAC 62
+ R VF+ + +N W+ALI G++L + + L+ +M +G+ +S T +++ +AC
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +G+Q+HA + G +DL GN+++ MY K G +
Sbjct: 236 ASLDHLRMGEQLHA-LLAKSGVHADLTAGNSLLSMYAKAGLI------------------ 276
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A LF+E+ +KD V+++A+V+GYVQN + EA F++MQ VE
Sbjct: 277 -------------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V +I AC+ L +++ C G + + +ALIDMY+KCG ID +
Sbjct: 324 PDAATMVSLIPACSHLAALQHGR--CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 381
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R++ S+++MI G+ +HG A LF +M P+GVTFI +L+ACSH G
Sbjct: 382 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG++P +HY CMVDLL R G L+EA + ++ MP+ + VW AL
Sbjct: 442 LVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVAL 501
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++++N ++ + + + EL P+ GN+++LSNIY++AG +D+ + VR + K+ G K
Sbjct: 502 LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFK 561
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E + G +H F GD +HP S EI + L ++L ++ GYQP+ VL D+ +
Sbjct: 562 KSPGCSWIEIN-GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 620
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++ L+ HSEKLA+A+G+L+ S T+ + KNLR+C DCH + S V R I+VRD
Sbjct: 621 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRD 680
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G+CSCG++W
Sbjct: 681 ANRFHHFKNGQCSCGDFW 698
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 64/326 (19%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R + P ++T KAC+ + D G+ IH I G +DL+V ++ MYVKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCA 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L P+ A +F +P +D VAW AM+ GY
Sbjct: 60 CL----------PD---------------------AAHIFATMPARDLVAWNAMLAGYAH 88
Query: 163 NAKPREAIEYF--ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
+ A+ + +MQ + + TLV ++ AQ G + V + P
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 221 N--------VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
N V++G+AL+DMY+KCGS+ A R+F M RN ++S++I GF + R A
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 273 IQLFGDMVKTETKPNGVTFI------GVLTACS-----------HVGLKCYGVSPSTDHY 315
LF M+ G+ F+ L AC+ H L GV
Sbjct: 209 FLLFKAMLA-----QGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAG 263
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVE 341
++ + +AG +++A+ + ++M V+
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVK 289
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 313/553 (56%), Gaps = 52/553 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I Y ++ M REG+ P FT S++ +AC + +
Sbjct: 22 VFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFN 81
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +Q+H I +G SD++V + +I +Y + W
Sbjct: 82 L---RQLHCCIIKIG-LDSDVFVRSALIDVYSR---------------------W----- 111
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G++E+A +F+E+ D V W++++ G+ QN+ EA+ F+RM+ AG T
Sbjct: 112 -----GELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTT 166
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC L +++ V ++++ +AL+DMY KCGS++DA +FV
Sbjct: 167 LTSVLRACTGLALLELGRQV----HVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVR 222
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +++V S+S+MI G A +G + A++LF M KPN VT +GVL ACSH GL
Sbjct: 223 MVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+ P +HY CM+DLLGRAG L EA+ ++ +M EP+ W ALL AC+
Sbjct: 283 LYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACR 342
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+HRN ++A AA + L+P G Y++LSNIYA+ W+DV+ VRR + G+KK PG
Sbjct: 343 VHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGC 402
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + IH F GD +HP EI L L+ +L GY P+ VL D+ E+ +
Sbjct: 403 SWIEVSKQ-IHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQD 461
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+ FGL++ G T+RI KNLRIC DCHLF +++ R IV+RD +R+H
Sbjct: 462 SLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYH 521
Query: 536 HFQDGKCSCGNYW 548
HFQDG CSCG++W
Sbjct: 522 HFQDGLCSCGDFW 534
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI Y G + A +F+++P ++ V+WT M++ Y +A+E+ M GV +
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V+ AC G+ C I + G ++V V SALID+YS+ G +++A R+
Sbjct: 66 MFTYSSVLRACD--GLFNLRQLHCCIIK---IGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M ++ +SS+I GFA + A++LF M + T VL AC+ + L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 305 CYG--VSPSTDHY-------ACMVDLLGRAGCLEEA----LKMVEK 337
G V Y ++D+ + G LE+A ++MVEK
Sbjct: 181 ELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEK 226
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI+MY K G + DA +F M RNV S+++MI ++ A++ M++ +PN
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 288 GVTFIGVLTACS--------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
T+ VL AC H + G+ + ++D+ R G LE AL++ ++M
Sbjct: 66 MFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM- 124
Query: 340 VEPNGGVWGALLG 352
V + VW +++
Sbjct: 125 VTGDLVVWSSIIA 137
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 331/581 (56%), Gaps = 56/581 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ G G ++++++ M +G+ P + T+S+L K+ V G ++H
Sbjct: 275 WNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHC-FF 333
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA- 138
L G D Y G ++ MY KCG L C+R+VFD + R++ +W L+ +A G E+A
Sbjct: 334 LRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAAL 393
Query: 139 ---------------------------GGLFNELPL-----------KDKVAWTAMVTGY 160
GL ++ L + V+WT++++G
Sbjct: 394 ELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGS 453
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
N + ++ +F+ MQ GV+ VT++ ++ ACA L ++K + A +
Sbjct: 454 CHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYD--C 511
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
++VVG+ALIDMYSK GS+ A RIF ++ +N+ ++M+ G A+HG++H AI LF D+
Sbjct: 512 DMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLW 571
Query: 281 KTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCL 328
++ KP+ +TF +LTAC +GL YGV P+ ++YACMVDLL R+G L
Sbjct: 572 RSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYL 631
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIY 388
+EA+ ++E+ PV+P +WGALL C IH N ++A++AA +LF LEP NY+++ ++Y
Sbjct: 632 DEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLY 691
Query: 389 ASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDL 448
M+D+ ++ +K G+ PG+SW++ ++G IH F HP + EI + L L
Sbjct: 692 EHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQG-IHVFEVDGSPHPETAEICEELMSL 750
Query: 449 LDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLL-TTSPGATVRIMKNLRI 507
+ +++ GY P+ V+Y+V +EEK+++L+ H+EKLA+ +GL+ + + VR++KN R+
Sbjct: 751 VRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRM 810
Query: 508 CEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
C DCH S + GR+I++RD +RFHHF DG CSC +YW
Sbjct: 811 CSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDYW 851
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 179/409 (43%), Gaps = 28/409 (6%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ LW + G ++I + M+ G+ + L+ + AC G+ +
Sbjct: 132 KDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAV 191
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF-DEMPERDVVSWTELIVAYANNG 133
HA + G + V + GMY + + + V P V+W ++ G
Sbjct: 192 HAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLG 251
Query: 134 ----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
ME AG + + P W A+++G ++ + REA+ RM G+ D T+
Sbjct: 252 LVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVS 311
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
++ + A G++++ V G P + G+AL+DMY+KCG +D A R+F ++
Sbjct: 312 SLLKSVANAGMVRHGMEVHCFFLRHGLVP--DAYTGTALVDMYAKCGRLDCARRVFDTLE 369
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
RN+ +++S++ G A G+ AA++L M + PN T+ G++T S GL
Sbjct: 370 HRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAML 429
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGACQ 355
K G++P+ + ++ G E++ ++M V+P+ LL AC
Sbjct: 430 LLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACA 489
Query: 356 ----IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
+ + E+ A ++ + +G +I ++Y+ AG R+
Sbjct: 490 GLALLKKGKELHCFALRRAYDCDM-VVGTALI--DMYSKAGSLTSAKRI 535
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 166/423 (39%), Gaps = 48/423 (11%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE----RDVVSWTEL 125
L Q+H+ + G T + V + + + G SR++ +E E +D V W +
Sbjct: 81 LAPQLHSLAVRAGHATREPRVACALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQ 140
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ A G+ + A G F E+ + D A ++ + A RE AG+
Sbjct: 141 VAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGL 200
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + G ++ G A+ A P V A++ + G +DDA
Sbjct: 201 VDAHPLVPGFLAGMYAEG----ADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDA 256
Query: 242 YRIFVGM----KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ M + + ++++++ G A HGR A+ + M++ P+ T +L +
Sbjct: 257 MELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKS 316
Query: 298 CSHVGL-------KCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
++ G+ C+ G+ P +VD+ + G L+ A ++ + + N
Sbjct: 317 VANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLE-HRNLAT 375
Query: 347 WGALLG----ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
W +L+ A Q E+ + + L+P+ + + L Y+ G+ + R
Sbjct: 376 WNSLVAGHAYAGQFEAALELVERMKRN--RLDPN-VTTWNGLITGYSLNGLSSQAMLLLR 432
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
+K GL N SW G H + E + + + +Q DG QP+L
Sbjct: 433 QIKAAGLTPNV-VSWTSLISGSCH-----------NGEYEDSF-NFFKEMQKDGVQPSLV 479
Query: 463 SVL 465
++L
Sbjct: 480 TML 482
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 306/541 (56%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WTALI GY +++ + M GI + S+ AC + ++ G+QIHAQ+
Sbjct: 484 WTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQS- 542
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ G++ DL +GN ++ +Y +CG + ++ + E
Sbjct: 543 YVSGYSEDLSIGNALVSLYARCGRI---KEAYLE-------------------------- 573
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
F ++ KD ++W +++G+ Q+ +A++ F +M A +E + T +SA A +
Sbjct: 574 --FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
IK + + GF +++ V +ALI Y+KCGSI+DA R F M ++N S+++M
Sbjct: 632 NIKQGKQIHAMIIKRGFD--SDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAM 689
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I G++ HG + A+ LF M + PN VTF+GVL+ACSHVGL K +G
Sbjct: 690 ITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHG 749
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P HYAC+VDL+ RAG L A K +E+MP+EP+ +W LL AC +H+N E+ + AA
Sbjct: 750 LVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAA 809
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
HL ELEP+ Y++LSN+YA +G WD + R++++ G+KK PG SW+E + +H
Sbjct: 810 QHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEV-KNSVHA 868
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD HP + +I + L +L + GY + S+L DV E+K + HSEKLA+
Sbjct: 869 FYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAIT 928
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGLL+ S + +MKNLR+C+DCH ++ S++ R I+VRD RFHHF+ G CSC +Y
Sbjct: 929 FGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDY 988
Query: 548 W 548
W
Sbjct: 989 W 989
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 168/361 (46%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + +N LW ++ + +L +S ++ M+ +G+ P FT ++ + CT V
Sbjct: 371 MFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGA 430
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH Q I G F ++YV + +I MY K
Sbjct: 431 LDLGEQIHTQVIKTG-FQFNVYVCSVLIDMYAK--------------------------- 462
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+G +++A + L D V+WTA+++GY Q+ EA+++F+ M G+++D +
Sbjct: 463 ----HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
ISACA + + + + SG+ ++ +G+AL+ +Y++CG I +AY F
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYS--EDLSIGNALVSLYARCGRIKEAYLEFEK 576
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ ++ S++ +I GFA G A+++F M + + + + TF ++A +
Sbjct: 577 IDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQG 636
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G + ++ + G +E+A + +MP E N W A++
Sbjct: 637 KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKNDVSWNAMITGYSQ 695
Query: 357 H 357
H
Sbjct: 696 H 696
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 174/404 (43%), Gaps = 57/404 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I G+ G+ +++I L+C M GI P + S++ CT++
Sbjct: 167 RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+Q+HA + G + + YV N ++ +Y + + KVF +M +D VS+ L
Sbjct: 227 KLFDVGEQLHA-LVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSL 285
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +G Q A+E F +M+ ++ D
Sbjct: 286 I-------------------------------SGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ ++SACA G + + +G ++++V AL+D+Y C I A+ +F
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGIS--SDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ + NV ++ M++ F + ++F M PN T+ +L C+ VG
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 306 YGVSPST---------DHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G T + Y C ++D+ + G L+ A ++ + E + W AL+
Sbjct: 433 LGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA-HVILRTLTEDDVVSWTALISGY 491
Query: 355 QIHRNPEIAQIAANHLFEL-----EPDKIGNYIILSNIYASAGM 393
H + A H E+ + D IG S I A AG+
Sbjct: 492 AQHN---LFAEALKHFKEMLNRGIQSDNIG---FSSAISACAGI 529
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 138/301 (45%), Gaps = 35/301 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT-EVL 66
VFE + ++ W +I G++ + + L+ M E + P + +++ +AC+ +
Sbjct: 67 VFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRI 126
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +QIHA+ I G S + + N +IG+Y K
Sbjct: 127 GIRYAEQIHARIICHGLLCSPI-ISNPLIGLYAK-------------------------- 159
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
NG + SA +F+ L KD V+W AM++G+ QN EAI F M AG+
Sbjct: 160 -----NGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPY 214
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+S C ++ + + + +G V +AL+ +YS+ + A ++F
Sbjct: 215 VFSSVLSGCTKIKLFDVGEQLHALV--FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFS 272
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
M+ ++ S++S+I G A G + A++LF M + KP+ VT +L+AC+ G C
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332
Query: 307 G 307
G
Sbjct: 333 G 333
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 32/195 (16%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L FE++ K+ W LI G+ G+ +D++ ++ M R + FT + A +
Sbjct: 572 LEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+QIHA I+ GF SD+ V N +I Y KCG
Sbjct: 632 NIKQGKQIHAM-IIKRGFDSDIEVSNALITFYAKCG------------------------ 666
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+E A F E+P K+ V+W AM+TGY Q+ EA+ FE+M+ G ++V
Sbjct: 667 -------SIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHV 719
Query: 187 TLVGVISACAQLGVI 201
T VGV+SAC+ +G++
Sbjct: 720 TFVGVLSACSHVGLV 734
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+L+ Y GD++ +F ++P + +W +++G+++ ++ F M V
Sbjct: 49 NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVS 108
Query: 183 TDYVTLVGVISACAQLGV-IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
++ V+ AC+ + I+YA + A G + + ++ + LI +Y+K G I A
Sbjct: 109 PTEISFASVLRACSGHRIGIRYAEQIH--ARIICHGLLCSPIISNPLIGLYAKNGLIISA 166
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F + ++ S+ +MI GF+ +G AI LF +M P F VL+ C+ +
Sbjct: 167 RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226
Query: 302 GL---------KCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKM 338
L + S + Y C +V L R A K+ KM
Sbjct: 227 KLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS----GFGPINNVVVGSALIDM 231
M++ G+ + T + ++ C G + C+ G GFG N V+ + L+D+
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVE----CKKLHGKILKLGFG--NESVLCNKLVDV 54
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y G +D ++F M R+V S+ +I GF ++ + LF M++ P ++F
Sbjct: 55 YFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISF 114
Query: 292 IGVLTACS------------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
VL ACS H + C+G+ S ++ L + G + A K+ + +
Sbjct: 115 ASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL 173
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F ++ KN W A+I GY G+ ++++L+ M++ G P T + AC+ V
Sbjct: 672 RREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G G ++ + + GFL +RK +EMP E D W
Sbjct: 732 GLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRT 791
Query: 125 LIVAYANNGDMES---AGGLFNELPLKDKVAWTAMVTGYVQNAK 165
L+ A + ++E A EL +D + + Y + K
Sbjct: 792 LLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGK 835
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 332/558 (59%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKAC 62
+ R VF+ + +N W+ALI G++L + + L+ +M +G+ +S T +++ +AC
Sbjct: 291 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 350
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +G+Q+HA + G +DL GN+++ MY K G +
Sbjct: 351 ASLDHLRMGEQLHA-LLAKSGVHADLTAGNSLLSMYAKAGLI------------------ 391
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A LF+E+ +KD V+++A+V+GYVQN + EA F++MQ VE
Sbjct: 392 -------------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V +I AC+ L +++ C G + + +ALIDMY+KCG ID +
Sbjct: 439 PDAATMVSLIPACSHLAALQHGR--CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R++ S+++MI G+ +HG A LF +M P+GVTFI +L+ACSH G
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG++P +HY CMVDLL R G L+EA + ++ MP+ + VW AL
Sbjct: 557 LVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVAL 616
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++++N ++ + + + EL P+ GN+++LSNIY++AG +D+ + VR + K+ G K
Sbjct: 617 LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFK 676
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E + G +H F GD +HP S EI + L ++L ++ GYQP+ VL D+ +
Sbjct: 677 KSPGCSWIEIN-GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 735
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++ L+ HSEKLA+A+G+L+ S T+ + KNLR+C DCH + S V R I+VRD
Sbjct: 736 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRD 795
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G+CSCG++W
Sbjct: 796 ANRFHHFKNGQCSCGDFW 813
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 152/363 (41%), Gaps = 66/363 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLK--DSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+F+Q+ + + LIR Y D + LY M R + P ++T KAC+ +
Sbjct: 79 LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D G+ IH I G +DL+V ++ MYVKC L
Sbjct: 139 ADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCACL--------------------- 176
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF--ERMQYAGVET 183
A +F +P +D VAW AM+ GY + A+ + +MQ +
Sbjct: 177 ----------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 226
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN--------VVVGSALIDMYSKC 235
+ TLV ++ AQ G + V + P N V++G+AL+DMY+KC
Sbjct: 227 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 286
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI--- 292
GS+ A R+F M RN ++S++I GF + R A LF M+ G+ F+
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA-----QGLCFLSPT 341
Query: 293 ---GVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
L AC+ H L GV ++ + +AG +++A+ + ++M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 339 PVE 341
V+
Sbjct: 402 AVK 404
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/563 (37%), Positives = 326/563 (57%), Gaps = 56/563 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ VF ++ K W ALI GY + S+ Y M+ G+ P FT+ +L AC
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG+++H L + N + ERD +
Sbjct: 505 SQIKSLKLGKEVHG-----------LIIRNRL---------------------ERDSFVY 532
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ Y + G++ +A LF+ + K V+W MV GY+QN P A+ F +M GV+
Sbjct: 533 ISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQ 592
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI----NNVVVGSALIDMYSKCGSI 238
++++ V AC+ L ++ E G+ +N + ++IDMY+K GS+
Sbjct: 593 PCEISMMSVFGACSLLPSLRLGR------EAHGYALKCLLEDNAFIACSVIDMYAKNGSV 646
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+++++F G+K+R+V S+++M++G+ +HGRA AI+LF +M +T P+ +TF+GVLTAC
Sbjct: 647 MESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTAC 706
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKM-VEKMPVEPNGG 345
+H GL +G++P+ HYAC++D+L RAG L+EALK+ E+M EP G
Sbjct: 707 NHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVG 766
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL +C+IH+N E+ + A LF EP+K NY++LSN+YA +G WD+V +VR+ +K
Sbjct: 767 IWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMK 826
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L+K+ G SW+E + G + F AG+ + EI+ L + GY+P+ SV
Sbjct: 827 EMSLRKDAGCSWIELN-GKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQ 885
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+D+S+EEK L HSEKLA+ +GL+ TS G T+R+ KNLRIC DCH S+V+ RE
Sbjct: 886 HDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMERE 945
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRDN RFHHF++G CSCG+YW
Sbjct: 946 IVVRDNKRFHHFKNGFCSCGDYW 968
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 35/297 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+ ++ KN F W A+I Y + + ++ M E G+ P +FT + KAC
Sbjct: 137 RSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAG 196
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V +V +G +H ++ D++V N ++ Y G + + +VF MPER++VSW
Sbjct: 197 VSEVQVGLAVHG-LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNS 255
Query: 125 LIVAYANNGDMESAGGLFNELPLKD-KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I +++NG E L ++ KD ++A+T
Sbjct: 256 MIRVFSDNGLSEECFLLLGQMMEKDDEIAFTP---------------------------- 287
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TL V+ CA+ I V +A VVV +AL+DMYSKCG I+DA
Sbjct: 288 DVATLATVLPVCARDREIGVGKGVHGLAMKLSLD--KEVVVNNALMDMYSKCGCINDAQV 345
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK--TETKPNGVTFIGVLTAC 298
IF +NV S+++M+ GF+ G H L M+ + + + VT + + C
Sbjct: 346 IFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 157/365 (43%), Gaps = 47/365 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACT 63
+++F+ KN W ++ G+ G + + L M G + T+ C
Sbjct: 344 QVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCF 403
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
E + +++H ++ ++ V N + Y KCG L + +VF + + V S
Sbjct: 404 EESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNS-- 461
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
W A++ GY Q++ PR +++ + +M+ +G+
Sbjct: 462 -----------------------------WNALIGGYSQSSDPRLSLDAYFQMKSSGLLP 492
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D T+ ++SAC+Q+ +K V + + + V + +L+ +Y CG + A+
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYI--SLLSLYIHCGELSTAHV 550
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
+F M+ + + S+++M+ G+ +G A+ LF MV +P ++ + V ACS
Sbjct: 551 LFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPS 610
Query: 300 -HVGLKCYGVS-----PSTDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G + +G + AC ++D+ + G + E+ K+ + E + W A++
Sbjct: 611 LRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK-ERSVASWNAMVM 669
Query: 353 ACQIH 357
IH
Sbjct: 670 GYGIH 674
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 54/312 (17%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ LG++IH ++D + +I MY CG SR VFD + ++++ W
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW---- 151
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDY 185
A+++ Y +N +E F +M +G+ D
Sbjct: 152 ---------------------------NAVISSYSRNELYHNVLEMFVKMITESGLLPDN 184
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+ ACA + ++ V + + + +V V +AL+ Y GS+ DA R+F
Sbjct: 185 FTFPCVVKACAGVSEVQVGLAVHGLVVKTRL--VEDVFVSNALVSFYGTNGSVSDALRVF 242
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK----PNGVTFIGVLTACSH- 300
M +RN+ S++SMI F+ +G + L G M++ + + P+ T VL C+
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302
Query: 301 ----VGLKCYGVSP--STDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
VG +G++ S D ++D+ + GC+ +A +++ K+ N W +
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDA-QVIFKLNNNKNVVSWNTM 361
Query: 351 LG----ACQIHR 358
+G A IH+
Sbjct: 362 VGGFSAAGDIHK 373
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACT 63
VF+ + +N W ++IR + G ++ L M + P TL+ + C
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCA 300
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +G+ +H + L ++ V N ++ MY KCG + ++ +F
Sbjct: 301 RDREIGVGKGVHGLAMKLS-LDKEVVVNNALMDMYSKCGCINDAQVIFK----------- 348
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--V 181
NN K+ V+W MV G+ + + +M G +
Sbjct: 349 ------LNNN--------------KNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDL 388
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT++ + C + V+ + + F NN +V +A + Y+KCGS+ A
Sbjct: 389 RADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVH-NNELVANAFVASYAKCGSLSYA 447
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+R+F ++ + V S++++I G++ ++ + M + P+ T +L+ACS +
Sbjct: 448 HRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQI 507
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 314/548 (57%), Gaps = 53/548 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+PF ++R H + +++L+ RR P + T L +ACT +L + G+ +H
Sbjct: 87 DPFSLNTVLRIAASSAHPRIALALH---RRRLAPPDTHTYPPLLQACTRLLALREGESLH 143
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A+ G + ++V N+++ Y CG
Sbjct: 144 AEAAK-NGLVALVFVKNSLVHHYGACGLF------------------------------- 171
Query: 136 ESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
ESA +F+E+P+ ++ V+W +++ G+ N +P E + F A + D T+V V++
Sbjct: 172 ESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLT 231
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRN 252
ACA++G + V A S G + N VG+ALID+Y+KCG ++DA+++F M R
Sbjct: 232 ACAEIGALTLGRRVHVFA--SKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVART 289
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--------- 303
V S++S+I+G A +G A++LFG M + P +T +GVL ACSH GL
Sbjct: 290 VVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFN 349
Query: 304 ---KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
YG++P +H CMVDLLGRAG +EEA + MPVEPN VW LLGAC +H+
Sbjct: 350 EMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKL 409
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ + A L EL+P G+Y++LSN+YA+ G W D +R+ + G++KNPG+S +E
Sbjct: 410 ELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVE- 468
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
R ++EF GD +HP S +I Q L ++ +RL+ GY P +VL D+ +EEK+ L H
Sbjct: 469 LRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYH 528
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SE+LA+AF LL + PG+ +RI+KNLR+C DCHL + S+V REI+VRD RFHHF+ G
Sbjct: 529 SERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKGG 588
Query: 541 KCSCGNYW 548
+CSC +YW
Sbjct: 589 ECSCKDYW 596
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 47/270 (17%)
Query: 8 VFEQVKY--KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF+++ +N W +++ G+ G + ++++ + P FT+ ++ AC E+
Sbjct: 177 VFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEI 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTE 124
++LG+++H + G + +VGN +I +Y KCG + + KVF+EM R VVSWT
Sbjct: 237 GALTLGRRVHVFASKV-GLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTS 295
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIV A NG F ++A+E F M+ +
Sbjct: 296 LIVGLAGNG--------FG-----------------------KDALELFGLMERERLIPT 324
Query: 185 YVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGP-INNVVVGSALIDMYSKCGSID 239
+T+VGV+ AC+ G++ +Y N E+ + G P I ++ ++D+ + G ++
Sbjct: 325 DITMVGVLYACSHCGLVDDGFRYFN---EMQDKYGIAPGIEHL---GCMVDLLGRAGRVE 378
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
+A+ M + N + +++ AMH +
Sbjct: 379 EAHNYITTMPVEPNAVVWRTLLGACAMHKK 408
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 304/552 (55%), Gaps = 55/552 (9%)
Query: 16 NPFLWTALIRGYI---LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL-DVSLG 71
+ FL LIR + + + + + M R + P FT L KAC + +G
Sbjct: 87 DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVG 146
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTELIVA 128
Q HA + G F +D YV NT+I MY C GFLG +R VFD MP+
Sbjct: 147 LQAHAAALKFG-FATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPK------------ 192
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
ESA V W+AM+ GYV+ +A+E F MQ GV+ D VT+
Sbjct: 193 -------ESA------------VTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTV 233
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+GV++A LG ++ A WV E G G +V + +ALID +KCG +D A +F GM
Sbjct: 234 IGVLAAATDLGALELARWVRRFVEREGIG--KSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---KC 305
+QR+V S++S+I AM GR A+++F +M P+ V FIGVLTACSH G+ C
Sbjct: 292 QQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGC 351
Query: 306 ---------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
YG+ P +HY CMVD+ GRAG +E A++ V MP++PN +W +L+ AC+
Sbjct: 352 GYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRA 411
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H E+ + L P NYI+LSN++A W + S +RR + G+KK PG S
Sbjct: 412 HGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCS 471
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E D G +HEF AGD +HP +I + + ++ L+ G+ VL D+ +E+K+
Sbjct: 472 IVELD-GEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGA 530
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEKLA+AF LL T PG VR++KNLR+C DCH + SQV REIVVRD RFH
Sbjct: 531 LQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHR 590
Query: 537 FQDGKCSCGNYW 548
F+DG CSC ++W
Sbjct: 591 FKDGSCSCKDFW 602
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 50/272 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W+A+I GY+ G D++ L+ M+ G+ T+ + A T++
Sbjct: 184 RNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDL 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ L + + + + G + + N +I KCG + + VF+ M +R VVSWT +
Sbjct: 244 GALELARWVR-RFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSV 302
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A A G + +EA+ FE M+ AGV D
Sbjct: 303 IDALAMEG-------------------------------RGKEAVRVFEEMKVAGVPPDD 331
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG--------SALIDMYSKCGS 237
V +GV++AC+ G++ EG G+ V G ++DM+ + G
Sbjct: 332 VAFIGVLTACSHAGMVD---------EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGM 382
Query: 238 IDDAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
++ A M Q N + S++ HGR
Sbjct: 383 VERAMEFVRTMPIQPNPVIWRSLVSACRAHGR 414
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 309/554 (55%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + + W AL+ G+ ++ M EG P FT ++ ++C+ +LD
Sbjct: 209 VFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLD 268
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+HA I+ D +VG ++ MY K L
Sbjct: 269 PEFGKQVHAH-IIKNSSDDDDFVGTALVDMYAKARCL----------------------- 304
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E AG F+ L +D +WT +++GY Q + +A++YF +MQ G++ + T
Sbjct: 305 --------EDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSG-FGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L +S C+ + ++ + +A +G FG ++ VGSAL+D+Y KCG ++ A IF
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFG---DIFVGSALVDLYGKCGCMEHAEAIFK 413
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
G+ R++ S++++I G++ HG+ A++ F M+ P+ TFIGVL+ACS +GL
Sbjct: 414 GLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K YG++PS +HYACMVD+LGRAG E +E+M + P +W +LGAC
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N + + AA LFE+EP +YI+LSNI+AS G WDDV +R L+ G+KK PG
Sbjct: 534 KLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPG 593
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E D G +H F + D +HP EI L L L + GY P VL++VS++EK
Sbjct: 594 CSWVEVD-GQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKM 652
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSE+LAL+F LL+T+ +RI KNLRICEDCH FM S + +EIVVRD RF
Sbjct: 653 EHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRF 712
Query: 535 HHFQDGKCSCGNYW 548
HHF+ G CSC + W
Sbjct: 713 HHFKRGTCSCQDRW 726
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 149/342 (43%), Gaps = 46/342 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M+ RL F + KN W AL+ GY G K + L+C M+ FTLS + K
Sbjct: 1 MELAERLFF-GMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK 59
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C + G+ +HA L G D ++G +++ MY KCG + + KVF ++ DVV
Sbjct: 60 GCANTGSLREGKVLHALA-LRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVV 118
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
AW+AM+TG Q +EA E F M+ G
Sbjct: 119 -------------------------------AWSAMITGLDQQGHGQEAAELFHLMRRKG 147
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ TL ++S +G ++Y + GF N +V + LI MY K ++D
Sbjct: 148 ARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDN--LVSNPLIMMYMKSRCVED 205
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F M ++ S+++++ GF ++F M+ KPN TFI VL +CS
Sbjct: 206 GNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSS 265
Query: 301 VGLKCYGV---------SPSTDHY--ACMVDLLGRAGCLEEA 331
+ +G S D + +VD+ +A CLE+A
Sbjct: 266 LLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDA 307
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 125/252 (49%), Gaps = 38/252 (15%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+ F+++ ++ F WT +I GY + ++ + M+REGI P +TL++ C+ +
Sbjct: 309 VAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMA 368
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+Q+HA + G F D++VG+ ++ +Y KCG + + +F + RD+VSW +I
Sbjct: 369 TLENGRQLHAVAVKAGHF-GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTII 427
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+GY Q+ + +A+E F M G+ D
Sbjct: 428 -------------------------------SGYSQHGQGEKALEAFRMMLSEGIMPDEA 456
Query: 187 TLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +GV+SAC+ +G+++ + +++ G P ++ + ++D+ + G ++ +IF
Sbjct: 457 TFIGVLSACSFMGLVEEGKKRFDSMSKIYGINP--SIEHYACMVDILGRAGKFNEV-KIF 513
Query: 246 VGMKQRNVFSYS 257
+ ++ N+ YS
Sbjct: 514 I--EEMNLTPYS 523
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
ME A LF +P K+ V+W A++ GY Q ++ ++ F +M+ + TL V+
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA G ++ + +A SG + +G +L+DMYSKCG++ DA ++F ++ +V
Sbjct: 61 CANTGSLREGKVLHALALRSGCEI--DEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVV 118
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP---- 310
++S+MI G G A +LF M + +PN T +++ +++G YG S
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178
Query: 311 -----STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+D+ ++ + ++ C+E+ K+ E M P+ W ALL
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAM-TNPDLVSWNALL 225
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/559 (36%), Positives = 337/559 (60%), Gaps = 22/559 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WT++ Y+ G + I L+ M GI S T+S++ AC +
Sbjct: 132 RCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY 191
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+++H IL ++YV + ++ MY L +R VFD M RD+VSW +
Sbjct: 192 --IKLGREVHG-FILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVM 248
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+ AY N + E GLF+++ + ++ +W A ++G +QN + A+ +MQ +G+
Sbjct: 249 LTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGI 308
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ + +T+V + C L ++ + F I +V + +AL+ +Y+KCG ++ +
Sbjct: 309 KPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWF--IEDVTITTALVLLYAKCGDLELS 366
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M +++V ++++MI+ +MHG+ ++ LF M+ + +PN VTFIGVL+ CSH
Sbjct: 367 RHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHS 426
Query: 302 GLKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
L G ++P DHY+CMVD+L RAG LEEA + KMP+EP WGA
Sbjct: 427 QLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGA 486
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC++++N E+ +AA+ LFE+EPD GNY++LSNI +A W + S +R++++ GL
Sbjct: 487 LLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGL 546
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG SW++ + ++ F GD ++ I + L ++ ++++ DGYQPN VL +V
Sbjct: 547 AKTPGRSWVQV-KNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVD 605
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
E+++ L +HSE+LA+AFG+L +S TVR+ KNLRIC DCH + ++++G +I+VR
Sbjct: 606 QEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVR 665
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D++RFHHF+DG C+C ++W
Sbjct: 666 DSLRFHHFRDGYCTCNDFW 684
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 44/299 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ + WT LI G+ G K +I +Y ++ + P F L ++ KAC D
Sbjct: 33 LFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGD 92
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + ++IH I G F DL +GN +I M+ KC F+ +R VFD+M +DVVSWT +
Sbjct: 93 LVVAKKIHDDAIQFG-FNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTY 151
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y N G R+ I F M G+ + +T
Sbjct: 152 CYVNCG-------------------------------MCRQGILLFREMGLNGIRANSLT 180
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSIDDAYR 243
+ ++ ACA IK E GF N NV V SAL++MY+ + A
Sbjct: 181 VSSILPACADY--IKLGR------EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARL 232
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M R++ S++ M+ + ++ + LF M K K N ++ ++ C G
Sbjct: 233 VFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNG 291
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+LI N+GD++ A LF+++P D WT +++G+ Q+ P++AI+ + + V
Sbjct: 16 KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D L+ V ACA G + A + + A GF ++V+G+ALIDM+ KC ++ A
Sbjct: 76 DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFN--KDLVLGNALIDMFGKCKFVNGARC 133
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+F M ++V S++SM + G I LF +M + N +T +L AC+
Sbjct: 134 VFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 311/541 (57%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+ +I + G + ++ ++C MRR + P FT S++ +A ++ + L + IH
Sbjct: 216 WSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHA- 274
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L G ++D++V N ++ Y KCG + E +
Sbjct: 275 LKAGLSTDVFVSNALMACYAKCGCI-------------------------------EQSM 303
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF L ++ V+W ++ YVQ A+ F M V+ VT ++ ACA L
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ V + + +G +V VG+ALIDMY+KCGSI DA +F + R+ S++++
Sbjct: 364 ALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I G++MHG AI++F M +T+ KP+ +TF+GVL+ACS+ G + YG
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYG 481
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY CMV L+GR+G L++A+K +E +P EP+ +W ALLGAC IH + E+ +I+A
Sbjct: 482 IEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ ELEP ++++LSNIYA A W +V+ VR+ +K G+KK PG SW+E ++G +H
Sbjct: 542 QRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIE-NQGNVHC 600
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F D +H + I L L + + GY P L +VL DV D+EK+R+L HSE+LALA
Sbjct: 601 FTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALA 660
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGL+ G +RI+KNLRIC DCH + S+++GR+I+VRD RFHHF++G CSC +Y
Sbjct: 661 FGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADY 720
Query: 548 W 548
W
Sbjct: 721 W 721
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 170/366 (46%), Gaps = 46/366 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF+++ K+ WT +I Y +++ + MR G P +FT + + KAC
Sbjct: 98 SMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC 157
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + G+ +H ++L + DLYVG ++ +Y +CG + + F +MP+ DV+ W
Sbjct: 158 LGLQNFDAGKTVHC-SVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPW 216
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ +I +A +G E +A+E F +M+ A V
Sbjct: 217 SFMISRFAQSGQSE-------------------------------KALEIFCQMRRAFVI 245
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T V+ A A + + + + A +G +V V +AL+ Y+KCG I+ +
Sbjct: 246 PNQFTFSSVLQASADIESLDLSKTIHGHALKAGLS--TDVFVSNALMACYAKCGCIEQSM 303
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
+F + RN S++++I+ + G A+ LF +M++ + + VT+ +L AC+
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 300 --HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+GL+ + ++ T + ++D+ + G +++A M + + + W A++
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS-WNAII 422
Query: 352 GACQIH 357
+H
Sbjct: 423 CGYSMH 428
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 161/358 (44%), Gaps = 50/358 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF+++ +N + LI GY ++ L+ + EG F + + K +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
LG+ +H + +G Y NT IG T LI
Sbjct: 61 WAELGRIVHGCVLKVG------YGSNTFIG--------------------------TALI 88
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY+ +G + A +F+E+ KD V+WT M+ Y +N EA+E+F +M+ AG + +
Sbjct: 89 DAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNF 148
Query: 187 TLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T GV+ AC L V C + + + ++ VG L+++Y++CG DDA+R F
Sbjct: 149 TFAGVLKACLGLQNFDAGKTVHCSVLKTN---YERDLYVGVGLLELYTRCGDNDDAWRAF 205
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M + +V +S MI FA G++ A+++F M + PN TF VL A + +
Sbjct: 206 GDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLD 265
Query: 302 --------GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
LK G+S ++ + GC+E+++++ E + + N W ++
Sbjct: 266 LSKTIHGHALKA-GLSTDVFVSNALMACYAKCGCIEQSMELFEALS-DRNDVSWNTII 321
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ W A+I GY + G ++I ++ M+ P T + AC+
Sbjct: 404 RFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNT 463
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
+ G+Q G + M+ + + G L + K +++P E V+ W
Sbjct: 464 GRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRA 523
Query: 125 LIVAYANNGDME 136
L+ A + D+E
Sbjct: 524 LLGACVIHNDVE 535
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 332/558 (59%), Gaps = 48/558 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKAC 62
+ R VF+ + +N W+ALI G++L + + L+ +M +G+ +S T +++ +AC
Sbjct: 291 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 350
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +G+Q+HA + G +DL GN+++ MY K G +
Sbjct: 351 ASLDHLRMGEQLHA-LLAKSGVHADLTAGNSLLSMYAKAGLI------------------ 391
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A LF+E+ +KD V+++A+V+GYVQN + EA F++MQ VE
Sbjct: 392 -------------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V +I AC+ L +++ C G + + +ALIDMY+KCG ID +
Sbjct: 439 PDAATMVSLIPACSHLAALQHGR--CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R++ S+++MI G+ +HG A LF +M P+GVTFI +L+ACSH G
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG++P +HY CMVDLL R G L+EA + ++ MP+ + VW AL
Sbjct: 557 LVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVAL 616
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++++N ++ + + + EL P+ GN+++LSNIY++AG +D+ + VR + K+ G K
Sbjct: 617 LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFK 676
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E + G +H F GD +HP S EI + L ++L ++ GYQP+ VL D+ +
Sbjct: 677 KSPGCSWIEIN-GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 735
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++ L+ HSEKLA+A+G+L+ S T+ + KNLR+C DCH + S + R I+VRD
Sbjct: 736 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRD 795
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHHF++G+CSCG++W
Sbjct: 796 ANRFHHFKNGQCSCGDFW 813
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 66/363 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLK--DSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+F+Q+ + + LIR Y D + LY M R + P ++T KAC+ +
Sbjct: 79 LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D G+ IH I G +DL+V ++ MYVKC L
Sbjct: 139 ADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCACL--------------------- 176
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF--ERMQYAGVET 183
A +F +P +D VAW AM+ GY + A+ + +MQ +
Sbjct: 177 ----------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 226
Query: 184 DYVTLVGVISACAQLGVIKYANWV--------CEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ TLV ++ AQ G + V S + V++G+AL+DMY+KC
Sbjct: 227 NASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKC 286
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI--- 292
GS+ A R+F M RN ++S++I GF + R A LF M+ G+ F+
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA-----QGLCFLSPT 341
Query: 293 ---GVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
L AC+ H L GV ++ + +AG +++A+ + ++M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 339 PVE 341
V+
Sbjct: 402 AVK 404
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 309/557 (55%), Gaps = 50/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++++ + + ALI GY + G + S+ L+ + G+ P S TL AL +
Sbjct: 276 RHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPF 335
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +HA ++ G ++ V + +Y C F
Sbjct: 336 GHEPLAGCLHAH-VVKAGLDANAPVSTALTTLY--CRF---------------------- 370
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DM+SA F+ +P K +W AM++GY QN A+ F++MQ V +
Sbjct: 371 -------NDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNP 423
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+ +SACAQLG + WV +I NV V +ALIDMY KCGSI +A IF
Sbjct: 424 LTISSALSACAQLGALSLGKWVHKIIANEKLE--LNVYVMTALIDMYVKCGSIAEARCIF 481
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +NV S++ MI G+ +HG+ A++L+ DM+ P TF+ VL ACSH GL
Sbjct: 482 DSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVK 541
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-GVWGALLG 352
YG++P +H CMVDLLGRAG L+EA +++ + P G G+WGALLG
Sbjct: 542 EGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLG 601
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC +H++ ++A++A+ LFELEP+ G Y++LSN+Y S + + + VR+ K L K
Sbjct: 602 ACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKT 661
Query: 413 PGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG + +E GDR H F AGD HP S I L L ++ GY+P+ + LYDV +E
Sbjct: 662 PGCTLIEIGDRP--HVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEE 719
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ ++ HSEKLA+AFGLL T PG +RI+KNLR+C DCH S+V R IVVRD
Sbjct: 720 EKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDA 779
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 780 SRFHHFRDGVCSCGDYW 796
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG---PVSFTLSALFKAC 62
R VF+ V + LW L+ G L S +L +R G G P S TL+++ A
Sbjct: 178 RKVFDAVPSPDTVLWNTLLAG------LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAA 231
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
EV + ++G+ +HA KCG V
Sbjct: 232 AEVANTTMGRCVHA--------------------FGEKCGLAQHEHVV------------ 259
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI YA GDME A LF+ + D V + A+++GY N ++E F+ + G+
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
TLV +I + G A C A G N V +AL +Y + +D A
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAG--CLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R F M ++ + S+++MI G+A +G A+ LF M +PN +T L+AC+ +G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 303 LKCYG 307
G
Sbjct: 438 ALSLG 442
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 134/328 (40%), Gaps = 64/328 (19%)
Query: 36 SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
+ SL S R GI P S +AL + +HA + GF +D +V + +
Sbjct: 120 ATSLASSCSRGGISPPSAASAAL-------------RPLHALAVA-SGFAADNFVASALA 165
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
+Y +RKVFD +P D V W L+ + +
Sbjct: 166 KLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS----------------------- 202
Query: 156 MVTGYVQNAKPREAIEYFERMQYAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
EA+E F RM AG V D TL V+ A A++ V E
Sbjct: 203 ------------EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKC 250
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
G +VV G LI +Y+KCG ++ A +F M+ ++ +Y+++I G++++G ++++
Sbjct: 251 GLAQHEHVVTG--LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVE 308
Query: 275 LFGDMVKTETKPNGVTFIGV-----------LTACSHVGLKCYGVSPSTDHYACMVDLLG 323
LF ++V +P+ T + + L C H + G+ + + L
Sbjct: 309 LFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYC 368
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALL 351
R ++ A + + MP E W A++
Sbjct: 369 RFNDMDSARRAFDAMP-EKTMESWNAMI 395
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MDS R F+ + K W A+I GY G + +++L+ M+ + P T+S+
Sbjct: 373 MDS-ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALS 431
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC ++ +SLG+ +H + I ++YV +I MYVKCG + +R +FD M ++VV
Sbjct: 432 ACAQLGALSLGKWVH-KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVV 490
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW M++GY + + EA++ ++ M A
Sbjct: 491 SW-------------------------------NVMISGYGLHGQGAEALKLYKDMMDAH 519
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ T + V+ AC+ G++K V + S +G + + ++D+ + G + +
Sbjct: 520 LHPTSSTFLSVLYACSHGGLVKEGTTVFR-SMTSDYGITPGIEHCTCMVDLLGRAGQLKE 578
Query: 241 AYRIF 245
A+ +
Sbjct: 579 AFELI 583
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 324/560 (57%), Gaps = 57/560 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+Q+ + + A+I GY + +++L+ RE +
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLF----RELLAS--------------- 309
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW--- 122
GQ++++ T+ VG +I +Y+ L SR + + + ++
Sbjct: 310 -----GQRVNSSTL----------VG--LIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV 352
Query: 123 -TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T L Y +++ A LF+E P K +W AM++GY QN AI F+ M +
Sbjct: 353 STALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQL 411
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT+ ++SACAQLG + WV + + +NV V +AL+DMY+KCGSI +A
Sbjct: 412 SPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLE--SNVYVSTALVDMYAKCGSIVEA 469
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M +NV ++++MI G+ +HG A++LF +M+++ P GVTF+ +L ACSH
Sbjct: 470 RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YG P ++HYACMVD+LGRAG L AL+ +E+MP+EP VWGA
Sbjct: 530 GLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGA 589
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC IH+N E+A +A+ LF+L+P+ +G Y++LSNIY++ + + VR+++K L
Sbjct: 590 LLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL 649
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP-NLRSVLYDV 468
K PG + +E D + F +GD +HP +T I + L L +++ GYQ + + L+DV
Sbjct: 650 AKTPGCTLIEIDDQQ-YVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDV 708
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
DEEK+ ++ HSEKLA+AFGL++T PG +RI+KNLR+C DCH S++ R IVV
Sbjct: 709 EDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 768
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSCG+YW
Sbjct: 769 RDANRFHHFKNGICSCGDYW 788
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R +F +V + FL+ LIRG+ G K SI LY +R++ + P +FT + A +
Sbjct: 66 RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASR 125
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D +G +HA +I+ G S+L+VG+ ++ +Y K +RKVFD MPERD V W
Sbjct: 126 LEDERVGVLLHAHSIV-DGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLW-- 182
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
M++G+ +N+ ++I F M G+ D
Sbjct: 183 -----------------------------NTMISGFSRNSYFEDSIRVFVDMLDVGLSFD 213
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V++A A+L + + +A G ++V V + LI +YSKCG +
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLH--SDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
F + Q ++ SY++MI G+ + +A+ LF +++ + + N T +G++
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 163/363 (44%), Gaps = 47/363 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ LW +I G+ + +DSI ++ M G+ S TL+ + A E+
Sbjct: 168 RKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL 227
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG I G SD+YV +I +Y KCG R +FD++ + D++S+ +
Sbjct: 228 QEYRLGMGIQCLASK-KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y N + ESA LF EL + +G N+
Sbjct: 287 ISGYTFNHETESAVTLFREL----------LASGQRVNSS-------------------- 316
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLVG+I ++ + + ++ G I V +AL +Y + + A ++F
Sbjct: 317 -TLVGLIPVYLPFNHLQLSRLIQNLS--LKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
++++ S+++MI G+ +G AI LF +M+ + PN VT +L+AC+ +G
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALS 432
Query: 303 --------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+K + + +VD+ + G + EA ++ + M V+ N W A++
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGY 491
Query: 355 QIH 357
+H
Sbjct: 492 GLH 494
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 36/239 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F++ K+ W A+I GY G +ISL+ M + + P T++++ AC
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACA 426
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +S+G+ +H I S++YV ++ MY KCG + +R++FD M +++VV+W
Sbjct: 427 QLGALSIGKWVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I TGY + +EA++ F M +G+
Sbjct: 486 AMI-------------------------------TGYGLHGHGKEALKLFYEMLQSGIPP 514
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT + ++ AC+ G++ N + +A GF P++ + ++D+ + G + +A
Sbjct: 515 TGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHY--ACMVDILGRAGQLTNA 571
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM- 176
D+ S T+L + + G + LFN++ D + ++ G+ N P+ +I + +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 177 QYAGVETDYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+ + D T ISA ++L GV+ +A+ + + G +N+ VGSA++D+
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD-------GVASNLFVGSAIVDL 157
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y K + A ++F M +R+ +++MI GF+ + +I++F DM+ + T
Sbjct: 158 YFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTL 217
Query: 292 IGVLTACSHV-------GLKC 305
VLTA + + G++C
Sbjct: 218 ATVLTAVAELQEYRLGMGIQC 238
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 324/560 (57%), Gaps = 57/560 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+Q+ + + A+I GY + +++L+ RE +
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLF----RELLAS--------------- 309
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW--- 122
GQ++++ T+ VG +I +Y+ L SR + + + ++
Sbjct: 310 -----GQRVNSSTL----------VG--LIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV 352
Query: 123 -TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T L Y +++ A LF+E P K +W AM++GY QN AI F+ M +
Sbjct: 353 STALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQL 411
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT+ ++SACAQLG + WV + + +NV V +AL+DMY+KCGSI +A
Sbjct: 412 SPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLE--SNVYVSTALVDMYAKCGSIVEA 469
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M +NV ++++MI G+ +HG A++LF +M+++ P GVTF+ +L ACSH
Sbjct: 470 RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YG P ++HYACMVD+LGRAG L AL+ +E+MP+EP VWGA
Sbjct: 530 GLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGA 589
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC IH+N E+A +A+ LF+L+P+ +G Y++LSNIY++ + + VR+++K L
Sbjct: 590 LLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL 649
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP-NLRSVLYDV 468
K PG + +E D + F +GD +HP +T I + L L +++ GYQ + + L+DV
Sbjct: 650 AKTPGCTLIEIDDQQ-YVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDV 708
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
DEEK+ ++ HSEKLA+AFGL++T PG +RI+KNLR+C DCH S++ R IVV
Sbjct: 709 EDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 768
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSCG+YW
Sbjct: 769 RDANRFHHFKNGICSCGDYW 788
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 35/291 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTE 64
R +F +V + FL+ LIRG+ G K SI LY +R+ + P +FT + A +
Sbjct: 66 RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASR 125
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D +G +HA +I+ G S+L+VG+ ++ +Y K +RKVFD MPERD V W
Sbjct: 126 LEDERVGVLLHAHSIV-DGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLW-- 182
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
M++G+ +N+ ++I F M G+ D
Sbjct: 183 -----------------------------NTMISGFSRNSYFEDSIRVFVDMLDVGLSFD 213
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V++A A+L + + +A G ++V V + LI +YSKCG +
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLH--SDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
F + Q ++ SY++MI G+ + +A+ LF +++ + + N T +G++
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 163/363 (44%), Gaps = 47/363 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ LW +I G+ + +DSI ++ M G+ S TL+ + A E+
Sbjct: 168 RKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL 227
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG I G SD+YV +I +Y KCG R +FD++ + D++S+ +
Sbjct: 228 QEYRLGMGIQCLASK-KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y N + ESA LF EL + +G N+
Sbjct: 287 ISGYTFNHETESAVTLFREL----------LASGQRVNSS-------------------- 316
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLVG+I ++ + + ++ G I V +AL +Y + + A ++F
Sbjct: 317 -TLVGLIPVYLPFNHLQLSRLIQNLS--LKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
++++ S+++MI G+ +G AI LF +M+ + PN VT +L+AC+ +G
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALS 432
Query: 303 --------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+K + + +VD+ + G + EA ++ + M V+ N W A++
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGY 491
Query: 355 QIH 357
+H
Sbjct: 492 GLH 494
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 36/239 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R +F++ K+ W A+I GY G +ISL+ M + + P T++++ AC
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACA 426
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ +S+G+ +H I S++YV ++ MY KCG + +R++FD M +++VV+W
Sbjct: 427 QLGALSIGKWVHG-LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I TGY + +EA++ F M +G+
Sbjct: 486 AMI-------------------------------TGYGLHGHGKEALKLFYEMLQSGIPP 514
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VT + ++ AC+ G++ N + +A GF P++ + ++D+ + G + +A
Sbjct: 515 TGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHY--ACMVDILGRAGQLTNA 571
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM- 176
D+ S T+L + + G + LFN++ D + ++ G+ N P+ +I + +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 177 QYAGVETDYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+ + D T ISA ++L GV+ +A+ + + G +N+ VGSA++D+
Sbjct: 105 KXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD-------GVASNLFVGSAIVDL 157
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y K + A ++F M +R+ +++MI GF+ + +I++F DM+ + T
Sbjct: 158 YFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTL 217
Query: 292 IGVLTACSHV-------GLKC 305
VLTA + + G++C
Sbjct: 218 ATVLTAVAELQEYRLGMGIQC 238
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/472 (41%), Positives = 287/472 (60%), Gaps = 19/472 (4%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
N M+ G +G + +F PE+ D + WT ++ Y + G+++ A F +P+++
Sbjct: 143 NAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNL 202
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
V+W A+V GYV+N++ +A+ F+ M + + V+ + TL V+ C+ L + + +
Sbjct: 203 VSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGR---Q 259
Query: 210 IAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+ + P++ NV VG++L+ MY KCG ++DA ++F M +++ ++++MI G+A HG
Sbjct: 260 VHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGG 319
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYA 316
AI+LF M P+ +T + VLTAC H GL + Y + P DHY+
Sbjct: 320 GMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYS 379
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLL RAG LE A+ M+ MP EP+ +G LL AC++++N E A+ AA L E +P
Sbjct: 380 CMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQ 439
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
G Y+ L+NIYA A W DVSRVRR +K + K PGYSW+E +GV HEFR+ D HP
Sbjct: 440 NAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWME-IKGVRHEFRSNDRLHP 498
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG 496
I L L ++A GY P+L L+DV D K ++LM HSEKLA+AFGL++TSPG
Sbjct: 499 QLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPG 558
Query: 497 ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
T+RI KNLRIC DCH S++ REI++RD RFHHF+ G CSCG+YW
Sbjct: 559 MTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 33/196 (16%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKACTEVLD 67
F + +N W A++ GY+ D++ ++ +M + I P + TLS++ C+ +
Sbjct: 194 FGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSA 253
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+H + L + ++ VG +++ MY KCG L + KVFDEM +D+V+W +I
Sbjct: 254 LGFGRQVHQWCMKLP-LSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMIS 312
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA +G GG+ +AI+ FE+M+ GV D++T
Sbjct: 313 GYAQHG-----GGM--------------------------QAIKLFEKMKDEGVVPDWIT 341
Query: 188 LVGVISACAQLGVIKY 203
L+ V++AC G+ +
Sbjct: 342 LLAVLTACIHTGLCDF 357
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 31/284 (10%)
Query: 92 NTMIGMYVKCG---FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
N ++ Y K L +R++FD +P D VS+ L+ + GD++ A +F+ +P+K
Sbjct: 47 NCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVK 106
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
D +W MV+G +N EA F M + V+ +++A A G + A +
Sbjct: 107 DVTSWNTMVSGLSKNGASEEAAAMFRIMPV----RNAVSWNAMVAALACSGDMGAAEDLF 162
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
A + ++ +A++ Y G++ A F M RN+ S+++++ G+ + R
Sbjct: 163 RNAPEK-----TDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSR 217
Query: 269 AHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGR--- 324
A A+++F MV+ +PN T VL CS++ +G H CM L R
Sbjct: 218 ADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFG---RQVHQWCMKLPLSRNVT 274
Query: 325 -----------AGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
G L +A K+ ++M + + W A++ H
Sbjct: 275 VGTSLLSMYCKCGDLNDACKVFDEMSTK-DIVAWNAMISGYAQH 317
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
VF+++ K+ W A+I GY G +I L+ M+ EG+ P TL A+ AC
Sbjct: 295 VFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTAC 349
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/557 (36%), Positives = 311/557 (55%), Gaps = 47/557 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF+++ ++ W +I G +++ L M+REG FT+S++ AC
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+S Q +HA I +++V ++ +Y KCG
Sbjct: 177 AKCALSECQLLHAFAIK-AAMDLNVFVATALLDVYAKCGL-------------------- 215
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
M+ A +F +P + V W++M GYVQN +A+ F + G++
Sbjct: 216 -----------MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKH 264
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + VI ACA L + + + SGF +N+ V S+LIDMY+KCG I+++Y+
Sbjct: 265 DQFLMSSVICACAGLAAMIEGKQMNALLSKSGF--CSNIFVASSLIDMYAKCGGIEESYK 322
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F +++RNV +++MI G + H R+ + LF M + PN VTF+ VL+AC H+GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K + ++P+ HY+CMVD L RAG + EA ++ K+P + +WG+LL
Sbjct: 383 VRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
+C+ H N E+A++AA LF++EP GNY++LSN+YA+ G WD+V+++R+LLK + +KK
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKK 502
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+E + +H F G+ HP EI L +++D LQ GY+ + L+ V +
Sbjct: 503 ERGKSWIE-IKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGES 561
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K+ +L HSEKLA GLL P A +RIMKNLRIC DCH FM AS+ R+++VRD
Sbjct: 562 IKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDT 621
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSCG++W
Sbjct: 622 NRFHHFKNGCCSCGDFW 638
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 303/540 (56%), Gaps = 46/540 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WT+LI GY +++ L M R P FT ++L KA +G+QIHA T+
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ D+YVG+ ++ MY +CG M+ A
Sbjct: 69 KYD-WHDDVYVGSALLDMYARCG-------------------------------RMDMAI 96
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F++L K+ V+W A++ G+ + + F MQ G E + T V SA A +G
Sbjct: 97 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 156
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ WV A G + VG+ ++DMY+K GS+ DA ++F + ++++ +++SM
Sbjct: 157 ALEQGKWVH--AHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSM 214
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----------KCYGV 308
+ FA +G A+ F +M K N +TF+ +LTACSH GL K + +
Sbjct: 215 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNL 274
Query: 309 SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAAN 368
P DHY +VDLLGRAG L +AL + KMP++P VWGALLG+C++H+N +I Q AA+
Sbjct: 275 EPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAAD 334
Query: 369 HLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEF 428
H+FEL+PD G ++L NIYAS G WD +RVR+++K TG+KK P SW+E + V H F
Sbjct: 335 HVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSV-HMF 393
Query: 429 RAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAF 488
A D THP S EI + ++ +++ GY PN VL V ++E++ L HSEK+ALAF
Sbjct: 394 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAF 453
Query: 489 GLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
L+ GAT+RIMKN+RIC DCH S+V REIVVRD RFHHF G CSCG+YW
Sbjct: 454 ALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 36/256 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+Q++ KN W ALI G+ +G + ++ ++ M+R G FT S++F A +
Sbjct: 98 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 157
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ +HA I G S +VGNT++ MY K G + +RKVFD + ++D+V+W
Sbjct: 158 LEQGKWVHAHMIKSGERLS-AFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTW----- 211
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+M+T + Q REA+ +FE M+ GV + +T
Sbjct: 212 --------------------------NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 245
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGP-INNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ +++AC+ G++K ++ + P I++ V ++D+ + G ++DA
Sbjct: 246 FLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVT---VVDLLGRAGLLNDALVFIF 302
Query: 247 GMKQRNVFSYSSMILG 262
M + + +LG
Sbjct: 303 KMPMKPTAAVWGALLG 318
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD---YVTLVGVISACAQLGVI 201
+ +D +WT+++ GY QN P EA+ M + + + +L+ A A G+
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 202 KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
+ + A + ++V VGSAL+DMY++CG +D A +F ++ +N S++++I
Sbjct: 61 EQIH-----ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIA 115
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
GFA G + +F +M + + T+ V +A + +G
Sbjct: 116 GFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 156
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL-----TACSHVG 302
M R++ S++S+I G+A + A+ L M++ KPNG TF +L +A S +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 303 LKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + ++ D + + ++D+ R G ++ A+ + +++ NG W AL+
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIA 115
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 326/587 (55%), Gaps = 56/587 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFE++ + W ++ GY + G +K++ L+ + + L ++
Sbjct: 93 RNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGV 152
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++ ++ + D+ NT+I + + G + + +F MPE++ VSW+
Sbjct: 153 EAALAFFNKMPVK---------DIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSA 203
Query: 125 LIVAYANNGDMESAGGL-------------------------------FNELPLKDKVAW 153
+I Y +GD+E+A L F + +K+ V W
Sbjct: 204 MISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+M+ GYV+N + + ++ F+ M + V + ++L V+ C+ L + + ++
Sbjct: 264 NSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSK 323
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
S + ++LI MY KCG +D A+++F+ M +++V S+++MI G+A HG A+
Sbjct: 324 SPLS--KDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKAL 381
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDL 321
LF M KP+ +TF+ V+ AC+H G K +G+ HY C++DL
Sbjct: 382 HLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDL 441
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
LGRAG L+EA+ ++++MP +P+ ++G LLGAC+IH+N ++A+ AA +L L+P Y
Sbjct: 442 LGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGY 501
Query: 382 IILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEI 441
+ L+NIYA+ WD V++VR+++K + K PGYSW+E + V HEFR+ D HP T I
Sbjct: 502 VQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIE-IKSVTHEFRSSDRLHPELTSI 560
Query: 442 QQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRI 501
+ L +L +++ GY P+L L+DV +E K+++L+ HSEKLA+AFGL+ T+PG +R+
Sbjct: 561 HKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRV 620
Query: 502 MKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
KNLR+C DCH + S + REI+VRD RFHHF++G CSCG+YW
Sbjct: 621 FKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 75/331 (22%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA-KPREAIEYFER- 175
DVVS + I ++ D+ESA +F ++ ++ V W M++GY + A K +EA E F++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 176 ---------------MQYAGVET-----------DYVTLVGVISACAQLGVIKYA----- 204
++ GVE D + +IS AQ G ++ A
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 205 -----NWVCEIAEGSGFGP---------------INNVVVGSALIDMYSKCGSIDDAYRI 244
N V A SG+ + +VVV +A++ Y K G ++ A RI
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M +N+ +++SMI G+ + RA +++F M+++ +PN ++ VL CS++
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 305 CYG--------VSP-STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G SP S D AC ++ + + G L+ A K+ +MP + W A++
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMISG 370
Query: 354 CQIHRNPEIAQIAANHLFE------LEPDKI 378
H A A HLF+ ++PD I
Sbjct: 371 YAQHG----AGRKALHLFDKMRNGTMKPDWI 397
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 317/556 (57%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ +F +K ++ WT +I G I G +++ L+ MR+EG+ +T ++ AC +
Sbjct: 224 KRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGL 283
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH I+ G+ +++VG+ ++ MY KC + + VF M ++VVS
Sbjct: 284 RALKEGKEIHT-LIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVS---- 338
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
WTAM+ GY QN EA+ F MQ G+E D
Sbjct: 339 ---------------------------WTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 186 VTLVGVISACAQLGVIKY-ANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL VIS+CA L ++ A + C+ G I+ + V +ALI +Y KCGSI+D+ ++
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVS---GLISFITVSNALITLYGKCGSIEDSNQL 428
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M R+ S+++++ G+A G+A+ I LF M+ KP+ VTFI VL+ACS GL
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K +G+ P +DHY CM+DL GRAG LEEA + KMP P+ W LL
Sbjct: 489 ERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+++ N EI + AA L EL+P YI+LS+IYA+ G W +V+++RR ++ G +K
Sbjct: 549 SCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKE 608
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+SW++ + ++ F A D + P S +I L L ++ +GY P+ SVL+DV D E
Sbjct: 609 PGFSWIKY-KSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSE 667
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K ++L HSEKLA+AFGLL G +R++KNLR+C DCH S++ REI+VRD +
Sbjct: 668 KMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAV 727
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F+DG CSCG++W
Sbjct: 728 RFHLFKDGTCSCGDFW 743
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 208/392 (53%), Gaps = 18/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
+F + ++ W +LI GY+ G + +++ Y SM ++G+ ++ T S + +
Sbjct: 93 IFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQG 152
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V LG+QIH Q + G F + ++VG++++ MY K G + + +VFDE+ ER+VV + +I
Sbjct: 153 CVDLGRQIHGQIVKFG-FGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMI 211
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+G ++ + LF+ + +D ++WT M+TG +QN EA++ F M+ G+ D
Sbjct: 212 TGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQY 271
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V++AC L +K + + SG+ +NV VGSAL+DMY KC S+ A +F
Sbjct: 272 TFGSVLTACGGLRALKEGKEIHTLIIRSGYN--HNVFVGSALVDMYCKCRSVRYAEAVFK 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M +NV S+++M++G+ +G + A+++F DM + +P+ T V+++C+++
Sbjct: 330 RMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE 389
Query: 303 ---LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GAC 354
C + + ++ L G+ G +E++ ++ ++M W AL+ G
Sbjct: 390 GAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVS-WTALVSGYA 448
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + L + L+PD + +LS
Sbjct: 449 QFGKANETIDLFERMLVQGLKPDAVTFIAVLS 480
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 35/239 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ VF+++ KN WTA++ GY G ++++ ++C M+R GI P FTL ++ +C
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G Q H Q L+ G S + V N +I +Y KCG + S ++FDEM RD VSWT
Sbjct: 383 NLASLEEGAQFHCQA-LVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWT 441
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
A+V+GY Q K E I+ FERM G++
Sbjct: 442 -------------------------------ALVSGYAQFGKANETIDLFERMLVQGLKP 470
Query: 184 DYVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT + V+SAC++ G+++ E + + G P ++ + +ID++ + G +++A
Sbjct: 471 DAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHY--TCMIDLFGRAGRLEEA 527
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 47/277 (16%)
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
K C E + + +++H +++ T+ + ++ N +I Y K G + +R VFD+MP+ +
Sbjct: 13 KLCCETRNQTQAKKLHC--LIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPN 70
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
SW ++ AY+ +GD+ + +F+ +P +D V+W ++++GYV EA++ + M
Sbjct: 71 SFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130
Query: 179 AGV----ETDYVTLVGVISA--CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
GV + T++ ++S+ C LG + V GFG V VGS+L+DMY
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIV-----KFGFGAY--VFVGSSLVDMY 183
Query: 233 SK-------------------------------CGSIDDAYRIFVGMKQRNVFSYSSMIL 261
+K G + D+ R+F GMK+R+ S+++MI
Sbjct: 184 AKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMIT 243
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
G +G A+ LF DM + + TF VLTAC
Sbjct: 244 GLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTAC 280
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 316/556 (56%), Gaps = 53/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V N F + ++I G++ +G + S S+ SM R + A+ C +
Sbjct: 170 VFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKE 229
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG Q+H Q L ++YVG+ ++ MY KC F + +VF+ +PE+++VSWT ++
Sbjct: 230 VVLGSQVHTQA-LKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMT 288
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY N E +A++ F M+ GV + T
Sbjct: 289 AYTQNELFE-------------------------------DALQLFLDMEMEGVRPNEFT 317
Query: 188 LVGVISACAQLGVIKYANWV--CEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+++CA L +K N + C + G G P+ N AL++MYSK GS++DA R+
Sbjct: 318 YAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCN-----ALMNMYSKSGSVEDARRV 372
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F+ M R+V S++S+I+G+A HGRA A++ F DM+ E P+ VTFIGVL+AC+ +GL
Sbjct: 373 FLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLV 432
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K GV P +HY CMV LL R G L+EA + +E + + W +LL
Sbjct: 433 DEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLS 492
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+CQ++RN + A +F+L+P +G Y++LSN+YA A WD V +VRRL++ G++K
Sbjct: 493 SCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKE 552
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW++ V H F + D HP +I + L +L+D+++ GY PN+ L+DV DE+
Sbjct: 553 PGVSWIQVGSEV-HVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQ 611
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ LM HSEKLALAFGL+ T G +RIMKN+RIC+DCH+ + S GR IVVRD +
Sbjct: 612 KEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTV 671
Query: 533 RFHHFQDGKCSCGNYW 548
RFH +DG CSC +YW
Sbjct: 672 RFHCIEDGVCSCDDYW 687
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 166/408 (40%), Gaps = 82/408 (20%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++SLG+ +HA+ + F D+ N +I +YVKCG LG +R+VFD MP R+ VS L+
Sbjct: 31 ELSLGKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 127 VAYANNGDMESAGGL-------FNELPLKDKVAWTAMVTG-------------------- 159
YA++G A L NE L VA TA V
Sbjct: 89 SGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 160 ---------YVQNAKPREAIEYFERMQYAGV----------------------------- 181
Y Q A EA++ F+ + V
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208
Query: 182 --ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ D+V+ V V+ CA + + V A NV VGSAL+DMY KC
Sbjct: 209 VGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLEL--NVYVGSALVDMYGKCDFPH 266
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+A R+F + ++N+ S+++++ + + A+QLF DM +PN T+ L +C+
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 326
Query: 300 HVGLKCYG-----VSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+ G + T H+ ++++ ++G +E+A ++ MP
Sbjct: 327 GLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNS 386
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
++G R E + + LF E +I + + A G+ D+
Sbjct: 387 IIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDE 434
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 314/558 (56%), Gaps = 56/558 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + F + +IRGY+ + + ++ Y M GI P +FT L KACT +
Sbjct: 89 IFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKA 148
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIH LG +D++V N++I MY +C
Sbjct: 149 IREGKQIHGHVFKLG-LEADVFVQNSLINMYGRC-------------------------- 181
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYV 186
G+ME + +F +L K +W++M + V E + F M + ++ +
Sbjct: 182 -----GEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEES 236
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSIDDAY 242
+V +SACA G + + GF N N++V ++L+DMY KCG ID+A
Sbjct: 237 GMVSALSACANTGALNLGMSI------HGFLLRNISELNIIVKTSLVDMYVKCGCIDNAL 290
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M++RN +YS+MI GFA+HG +A+++F +M+K +P+ V ++ +L ACSH G
Sbjct: 291 HIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSG 350
Query: 303 L-----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + +G V P+ +HY C+VDLLGRAG LEEAL+ ++ +P+E N VW +
Sbjct: 351 LVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSF 410
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C++H+N E+ QIAA L +L G+Y+++SN+Y+ A MWDDV+R R + + GLK
Sbjct: 411 LSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLK 470
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
+ PG+S ++ +G H F + D +HP EI + L + +L+ +GY P+L +L +V +
Sbjct: 471 QTPGFSTVKV-KGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDE 529
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEKK L HS+K+A+AF LL T PG+ ++I +NLR+C DCH + S + REIVVRD
Sbjct: 530 EEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRD 589
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F+ G CSC +YW
Sbjct: 590 RNRFHLFKGGTCSCKDYW 607
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 125/284 (44%), Gaps = 22/284 (7%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
M A +F + + M+ GYV A+ ++ M G+E D T ++
Sbjct: 81 NSMNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLL 140
Query: 193 SACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
AC +L I+ + G F G +V V ++LI+MY +CG ++ + +F ++
Sbjct: 141 KACTRLKAIREGKQI----HGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEF 196
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLKCYGVS 309
++ S+SSM G + LF +M + T K + L+AC++ G G+S
Sbjct: 197 KSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMS 256
Query: 310 P-----------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
+ +VD+ + GC++ AL + +KM + N + A++ +H
Sbjct: 257 IHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKME-KRNNLTYSAMISGFALHG 315
Query: 359 NPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRV 400
E A + + + LEPD + Y+ L N + +G+ + RV
Sbjct: 316 EGESALRMFSEMIKEGLEPDHVV-YVSLLNACSHSGLVKEGRRV 358
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 334/609 (54%), Gaps = 70/609 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA---- 61
R VF+ + +N WT+++RGY+ +G ++++ L+ M R + + + L K
Sbjct: 103 RKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRID 162
Query: 62 -CTEVLDVSLGQQIHAQTILLGGF-----------------TSDLYVGNTMIGMYVKCGF 103
++ D+ + + T ++GG+ +++ TM+ Y K G
Sbjct: 163 DAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGR 222
Query: 104 LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK--------------- 148
+ +RK+F+ MPER+ VSWT +++ Y +G M+ A LF +P+K
Sbjct: 223 VDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLA 282
Query: 149 ----------------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
D+ W AM+ + + EA+ F RMQ GV ++ +++ V+
Sbjct: 283 GEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVL 342
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
S CA L + + V S F ++ V S LI MY KCG + A IF ++
Sbjct: 343 SVCASLASLDHGRQVHARLVRSEFD--QDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD 400
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---------- 302
V ++SMI G++ HG A+ +F DM + +P+ VTFIGVL+ACS+ G
Sbjct: 401 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE 460
Query: 303 -LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
+KC Y V P +HYACMVDLLGRAG ++EA+++VEKMP+EP+ VWGALLGAC+ H
Sbjct: 461 AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKL 520
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
++A++A L +LEP G Y++LS++YA+ G W DV +R+ + +K PG SW+E
Sbjct: 521 DLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIK-FPGCSWIEV 579
Query: 421 DRGVIHEFRAGD-LTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT 479
++ V H F GD +HP I Q L L L+ GY P+ VL+DV +EEK L
Sbjct: 580 EKKV-HMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGY 638
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSE+LA+A+GLL G +R+MKNLR+C DCH + ++V GREI++RD RFHHF+D
Sbjct: 639 HSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKD 698
Query: 540 GKCSCGNYW 548
G CSC ++W
Sbjct: 699 GSCSCKDFW 707
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 39/260 (15%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N MI YVK G + +RKVFD MPER+VVSWT ++ Y G +E A LF E+P ++ V
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WT M+ G ++ ++ +A + F+ + E D V + +I Q+G + A + +
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFDEM 202
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
+ + NV + ++ Y+K G +D A ++F M +RN S+++M++G+ GR
Sbjct: 203 K------VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKE 256
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
A +LF E P + + AC+ + L+ G AG + A
Sbjct: 257 AFELF------EAMP-----VKWIVACNEMILQ-----------------FGLAGEMHRA 288
Query: 332 LKMVEKMPVEPNGGVWGALL 351
M E M E + G W A++
Sbjct: 289 RMMFEGMK-ERDEGTWNAMI 307
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 312/557 (56%), Gaps = 26/557 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ + + L+ + G + L+ SM + + +S L K+
Sbjct: 69 RHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKS---- 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
G A+ + L + N M+ + G + + + F PE+ D V WT
Sbjct: 125 -----GAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTA 179
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVET 183
++ Y + G++ A F +P+++ V+W A+V GYV+N+ +A+ F M + A V+
Sbjct: 180 MVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL V+ C+ L + + + + N+ VG++L+ MY KCG + A
Sbjct: 240 NASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLS--RNLTVGTSLVSMYCKCGDLSSACI 297
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M R+V ++++MI G+A HG AI LF M +PN +TF+ VLTAC H GL
Sbjct: 298 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGL 357
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ YG+ P DHY+CMVDLL RAG LE A+ + MP EP+ +G LL
Sbjct: 358 CDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLL 417
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC++++N E A++AA L E +P G Y+ L+NIYA A WDDVSRVRR +K + K
Sbjct: 418 AACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVK 477
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PGYSW+E +GV+HEFR+ D HP I + LG L +R++ GY P+L VL+DV +
Sbjct: 478 TPGYSWIE-IKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDET 536
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K ++LM HSEKLA+AFGL++T+ G T+RI KNLR+C DCH S + REI++RD
Sbjct: 537 MKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMIEDREIILRDT 596
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+ G CSC +YW
Sbjct: 597 TRFHHFRGGHCSCDDYW 613
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 16/236 (6%)
Query: 92 NTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
N ++ Y + G L +R +FD +P DVVS+ L++ + +GD + A LF +P++D
Sbjct: 52 NCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDV 111
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA-NWVCE 209
+W MV+G ++ EA F M + V+ ++S A G + A W
Sbjct: 112 ASWNTMVSGLSKSGAVEEAKVVFLAMPV----RNSVSWNAMVSGFACSGDMSTAEEWFRN 167
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
E + V+ +A++ Y G++ A + F M RN+ S+++++ G+ + A
Sbjct: 168 APEK------EDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHA 221
Query: 270 HAAIQLFGDMVK-TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGR 324
A++LF MV+ +PN T VL CS++ +G H CM LL R
Sbjct: 222 DDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG---KQIHQWCMKLLLSR 274
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 41/253 (16%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGV 181
T + A +GD+ A F P K + ++ GY + + +A F+R+ V
Sbjct: 21 TAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDV 80
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG--------PINNVVVGSALIDMYS 233
Y TL+ +C A G G P+ +V + ++ S
Sbjct: 81 -VSYNTLL-----------------LCHFASGDADGARRLFASMPVRDVASWNTMVSGLS 122
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K G++++A +F+ M RN S+++M+ GFA G A + F + K + V +
Sbjct: 123 KSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRN---APEKEDAVLWTA 179
Query: 294 VLTACSHVG-----LKCYGVSPSTDHYACMVDLLG--RAGCLEEALK----MVEKMPVEP 342
+++ +G +K + P + + + G + ++AL+ MV + V+P
Sbjct: 180 MVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 343 NGGVWGALLGACQ 355
N ++L C
Sbjct: 240 NASTLSSVLLGCS 252
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 336/580 (57%), Gaps = 55/580 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W L+ G+ L G+ ++ +++ M+ EG P S +++++ +A +E+ +++G++ H +
Sbjct: 338 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY-V 396
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L GF D+YVG ++I MYVK L ++ VFD M R++ +W L+ Y+ G E A
Sbjct: 397 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 456
Query: 140 GLFNELPLK---------------------------------------DKVAWTAMVTGY 160
L N++ + + V+WTA+++G
Sbjct: 457 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGS 516
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
Q R+++++F +MQ GV + ++ ++ ACA L +++ + ++ +GF I
Sbjct: 517 SQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGF--IE 574
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+V V +ALIDMYSK S+ +A+++F ++ + + S++ MI+GFA+ G AI +F +M
Sbjct: 575 DVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQ 634
Query: 281 KTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCL 328
K P+ +TF +L+AC + GL Y + P +HY CMVDLLGRAG L
Sbjct: 635 KVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYL 694
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIY 388
+EA ++ MP++P+ +WGALLG+C+IH+N + A+ AA +LF+LEP+ NYI++ N+Y
Sbjct: 695 DEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLY 754
Query: 389 ASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDL 448
+ W+D+ +R L+ G++ +SW++ ++ V H F + + HP++ +I L L
Sbjct: 755 SIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRV-HVFSSDEKPHPDAGKIYFELYQL 813
Query: 449 LDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRIC 508
+ ++ GY P++ V ++ + EK++IL++H+EKLA+ +GL+ G +R++KN RIC
Sbjct: 814 VSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRIC 873
Query: 509 EDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
DCH S V RE+ +RD +RFHHF++GKCSC ++W
Sbjct: 874 SDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 21/365 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ LW I + L+ + L+ M+ + + T+ + +AC ++
Sbjct: 190 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 249
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ +QIH G SD+ + N +I MY K G L +R+VFD M R+ SW +I
Sbjct: 250 LNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 308
Query: 128 AYANNGDMESAGGLFNELPLKDK----VAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+YA G + A LF EL D V W +++G+ + E + +RMQ G +
Sbjct: 309 SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 368
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ ++ V+ A ++LG + +GF +V VG++LIDMY K S+ A
Sbjct: 369 NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDC--DVYVGTSLIDMYVKNHSLTSAQA 426
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F MK RN+F+++S++ G++ G A++L M K KP+ VT+ G+++ + G
Sbjct: 427 VFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGC 486
Query: 303 ----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGA 349
K G++P+ + ++ +AG ++LK +M E PN
Sbjct: 487 GKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITC 546
Query: 350 LLGAC 354
LL AC
Sbjct: 547 LLRAC 551
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 35/283 (12%)
Query: 15 KNPFLWTALIRGYILQ-GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+N W + + + G L + ++ + +G+ S S K CT V+D+ LG +
Sbjct: 95 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 154
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IH ++ GF D+Y+ ++ Y +C W
Sbjct: 155 IHG-CLIKRGFDLDVYLRCALMNFYGRC--------------------W----------- 182
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
+E A +F+E+P + + W + +Q+ K ++ +E F +MQ++ ++ + T+V V+
Sbjct: 183 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 242
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
AC ++G + A + FG ++V + + LI MYSK G ++ A R+F M+ RN
Sbjct: 243 ACGKMGALNAAKQIHGYV--FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 300
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S++SMI +A G + A LF ++ ++ KP+ VT+ +L+
Sbjct: 301 SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 343
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 33/233 (14%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WTALI G G+ +DS+ + M++EG+ P S +++ L +AC + + G++IH
Sbjct: 505 NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIH 564
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+I GF D++V +I MY K L + KVF + + + SW +I+ +A G
Sbjct: 565 CLSI-RNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG-- 621
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+EAI F MQ GV D +T ++SAC
Sbjct: 622 -----------------------------LGKEAISVFNEMQKVGVGPDAITFTALLSAC 652
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
G+I W + + + + + ++D+ + G +D+A+ + M
Sbjct: 653 KNSGLIG-EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM 704
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE-AIEYFERMQYAGVET 183
LI +Y GD SA +F ++ + W + V + +A +E F+ + GV
Sbjct: 72 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 131
Query: 184 DYVTLVGVISACAQLGVIKYANWV------CEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
D + C ++ I W+ C I G +V + AL++ Y +C
Sbjct: 132 DSEVYSVALKTCTRVMDI----WLGMEIHGCLIKRGFDL----DVYLRCALMNFYGRCWG 183
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++ A ++F M ++ I+ + ++LF M + K T + VL A
Sbjct: 184 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 243
Query: 298 CSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
C +G + +G+ ++ + + G LE A ++ + M N
Sbjct: 244 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSS 302
Query: 347 WGALLGA 353
W +++ +
Sbjct: 303 WNSMISS 309
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ K W +I G+ + G K++IS++ M++ G+GP + T +AL AC
Sbjct: 598 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 657
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
+ G + I L M+ + + G+L + + MP + D W L+
Sbjct: 658 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 717
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 328/587 (55%), Gaps = 80/587 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + YK+ WT ++ + K+++ L+ MR G P +FT +++FKAC +
Sbjct: 194 REVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+ +H L + DLYVG ++ +Y K
Sbjct: 254 EAFDVGKSVHG-CALKSRYELDLYVGVALLDLYTK------------------------- 287
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+GD++ A F E+P KD + W+ M+ Y Q+ + +EA+E F +M+ A V +
Sbjct: 288 ------SGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQ 341
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V+ ACA + + N + C + + G ++V V +AL+D+Y+KCG ++++ +
Sbjct: 342 FTFASVLQACATMEGLNLGNQIHCHVIK---IGLHSDVFVSNALMDVYAKCGRMENSMEL 398
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-----TET--------------- 284
F RN +++++I+G G A++LF +M++ TE
Sbjct: 399 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 458
Query: 285 -----------KPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDL 321
KP+ +TF+GVL+AC++ GL + +G+ P +HY CMV L
Sbjct: 459 EPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWL 518
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
LGR G L++A+K+++++P +P+ VW ALLGAC IH + E+ +I+A + E+EP +
Sbjct: 519 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATH 578
Query: 382 IILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEI 441
++LSN+YA+A WD+V+ VR+ +K G+KK PG SW+E +G +H F GD +HP I
Sbjct: 579 VLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIES-QGTVHSFTVGDTSHPEVRVI 637
Query: 442 QQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRI 501
L L + + GY PN VL DV DEEK+R+L HSE+LAL+FG++ T G+ +RI
Sbjct: 638 NGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRI 697
Query: 502 MKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
MKNLRIC DCH + S+V+ REIVVRD RFHHFQ+G CSCG+YW
Sbjct: 698 MKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 154/355 (43%), Gaps = 46/355 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N + LI+GY ++I L+ + REG F + + K
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDC 154
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG IHA I G S+ +VG +I Y CG + +R+VFD + +D+VSWT ++
Sbjct: 155 GELGWGIHA-CIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+A N +EA++ F +M+ G + + T
Sbjct: 214 CFAENDCF-------------------------------KEALKLFSQMRMVGFKPNNFT 242
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V AC L V A S + ++ VG AL+D+Y+K G IDDA R F
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYEL--DLYVGVALLDLYTKSGDIDDARRAFEE 300
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ +++V +S MI +A ++ A+++F M + PN TF VL AC+
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + G+ ++D+ + G +E ++++ + P N W ++
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP-HRNDVTWNTVI 414
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 155/349 (44%), Gaps = 74/349 (21%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG---PVSFTLSALFKA---CTEVLDV 68
+N FL RG+ +Q + +E +G P F A A C + +
Sbjct: 4 RNNFLIQFSRRGFSVQS---------AKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEP 54
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S G+ +H + + GG DL+ N ++ MYVK FL
Sbjct: 55 SRGKGLHCEILKRGG-CLDLFAWNILLNMYVKSDFLC----------------------- 90
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD---Y 185
A LF+E+P ++ +++ ++ GY ++ + EAIE F R+ G E + +
Sbjct: 91 --------DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVF 142
Query: 186 VTLVGVI--SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T++ ++ + C +LG + C G +N VG+ALID YS CG +D A
Sbjct: 143 TTILKLLVSTDCGELG---WGIHACIFK----LGHESNAFVGTALIDAYSVCGRVDVARE 195
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G+ +++ S++ M+ FA + A++LF M KPN TF V AC +GL
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKAC--LGL 253
Query: 304 KCYGVSPST-----------DHY--ACMVDLLGRAGCLEEALKMVEKMP 339
+ + V S D Y ++DL ++G +++A + E++P
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIP 302
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ + +I Y + L+ M++ G + + +
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV +G+QIHAQ +LLG + DL +GN +I MY KCG L ++ F E
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSE--------- 400
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
K ++WTA++TGYVQN + EA++ F M+ AG+ D
Sbjct: 401 ----------------------KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDR 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +I A + L +I + SG+ ++V GS L+DMY+KCG +D+A R F
Sbjct: 439 ATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK--SSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +RN S++++I +A +G A AI++F M+ P+ VTF+ VL ACSH GL
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 304 KC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+C Y +SP +HYAC++D LGR GC + KM+ +MP + + +W ++L +
Sbjct: 557 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+A++AA+ LF +EP Y+ILSNIYA AG W+D + V+++++ G++K
Sbjct: 617 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 676
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + I+ F + DLT P EI+ L L + GY+P++ L+ V E K
Sbjct: 677 GYSWVEIKQK-IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 735
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
L HSE+LA+AF L+ T G +RIMKNL C DCH + S+++ R+I+VRD+ R
Sbjct: 736 LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRR 795
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 796 FHHFKDGVCSCGDYW 810
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ K+ + A++ G +G ++ L+ +MRR GI FT S++ +
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG Q+HA +L +++V N+++ Y KC L R++FDEMPERD VS+ +
Sbjct: 250 AHLLLGHQVHA-LVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AYA N + LF E+ K+ + R+ + Y + AG D
Sbjct: 309 IAAYAWNQCAATVLRLFREM---QKLGFD------------RQVLPYATMLSVAGSLPD- 352
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+G +A V G + ++G+ALIDMYSKCG +D A F
Sbjct: 353 ----------VHIGKQIHAQLVL-------LGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+++ S++++I G+ +G+ A+QLF DM + +P+ TF ++ A S
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H L G S + +VD+ + GCL+EAL+ ++MP E N W A++ A
Sbjct: 456 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF Y N + + G L +R +FD+MP +++ S ++ AY+++GD+ +A LF
Sbjct: 38 GFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF 97
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS--ACAQLGV 200
P ++ WT M+ + + +A+ F M GV D VT+ V++ C +
Sbjct: 98 LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL 157
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+A FG +V V + L+D Y K G + A R+F+ M ++ +Y++M+
Sbjct: 158 HPFA---------IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------VSPSTDH 314
+G + G A+QLF M + TF +LT + + G V ST
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 315 YACMV-----DLLGRAGCLEEALKMVEKMPVEPN 343
V D + CL++ ++ ++MP N
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDN 302
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 57/385 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK--ACTEV 65
+F ++N WT ++R + G D++SL+ +M EG+ P T++ + CT
Sbjct: 96 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV- 154
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+H I G + ++V NT++ Y K G L +R+VF EM ++D V+
Sbjct: 155 ------PSLHPFAIKF-GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVT---- 203
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ AM+ G + +A++ F M+ AG+ +
Sbjct: 204 ---------------------------YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++ A + + + V + S + NV V ++L+D YSKC +DD R+F
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVLRS--TSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M +R+ SY+ +I +A + A ++LF +M K + + +L+
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
H L G++ ++D+ + G L+ A E + W AL+ G
Sbjct: 355 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGY 413
Query: 354 CQIHRNPEIAQIAAN-HLFELEPDK 377
Q ++ E Q+ ++ L PD+
Sbjct: 414 VQNGQHEEALQLFSDMRRAGLRPDR 438
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 304/552 (55%), Gaps = 55/552 (9%)
Query: 16 NPFLWTALIRGYI---LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL-DVSLG 71
+ FL LIR + + + + + M R + P FT L KAC + +G
Sbjct: 87 DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVG 146
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTELIVA 128
Q HA + G F +D YV NT+I MY C GFLG +R VFD MP+
Sbjct: 147 LQAHAAALKFG-FATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPK------------ 192
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
ESA V W+AM+ GYV+ +A++ F MQ GV+ D VT+
Sbjct: 193 -------ESA------------VTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTV 233
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+GV++A LG ++ A WV E G G +V + +ALID +KCG +D A +F GM
Sbjct: 234 IGVLAAATDLGALELARWVRRFVEREGIG--KSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---KC 305
+QR+V S++S+I AM GR A+++F +M P+ V FIGVLTACSH G+ C
Sbjct: 292 QQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGC 351
Query: 306 ---------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
YG+ P +HY CMVD+ GRAG +E A++ V MP++PN +W +L+ AC+
Sbjct: 352 GYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRA 411
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H E+ + L P NYI+LSN++A W + S +RR + G+KK PG S
Sbjct: 412 HGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCS 471
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E D G +HEF AGD +HP +I + + ++ L+ G+ VL D+ +E+K+
Sbjct: 472 IVELD-GEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGA 530
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEKLA+AF LL T PG VR++KNLR+C DCH + SQV REIVVRD RFH
Sbjct: 531 LQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHR 590
Query: 537 FQDGKCSCGNYW 548
F+DG CSC ++W
Sbjct: 591 FKDGSCSCKDFW 602
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 50/272 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W+A+I GY+ G D++ L+ M+ G+ T+ + A T++
Sbjct: 184 RNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDL 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ L + + + + G + + N +I KCG + + VF+ M +R VVSWT +
Sbjct: 244 GALELARWVR-RFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSV 302
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A A G + +EA+ FE M+ AGV D
Sbjct: 303 IDALAMEG-------------------------------RGKEAVRVFEEMKVAGVPPDD 331
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG--------SALIDMYSKCGS 237
V +GV++AC+ G++ EG G+ V G ++DM+ + G
Sbjct: 332 VAFIGVLTACSHAGMVD---------EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGM 382
Query: 238 IDDAYRIFVGMK-QRNVFSYSSMILGFAMHGR 268
++ A M Q N + S++ HGR
Sbjct: 383 VERAMEFVRTMPIQPNPVIWRSLVSACRAHGR 414
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 319/560 (56%), Gaps = 61/560 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F +K ++ WT +I G + G ++++ ++ MR G FT ++ AC +L
Sbjct: 226 LFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLA 285
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA I +++VG+ ++ MY KC
Sbjct: 286 LGEGKQIHAYVIRTD-HKDNVFVGSALVDMYSKCR------------------------- 319
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++SA +F +P K+ ++WTAM+ GY QN EA++ F MQ GVE D T
Sbjct: 320 ------SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDD 240
L VIS+CA L ++ EG+ F G I+ + V +ALI +Y KCGS ++
Sbjct: 374 LGSVISSCANLASLE---------EGAQFHCRALVSGLISFITVSNALITLYGKCGSTEN 424
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++R+F M R+ S+++++ G+A G+A+ I LF M+ KP+GVTFIGVL+ACS
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL K +G+ P DH C++DLLGRAG LEEA + MP P+ W
Sbjct: 485 AGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWA 544
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LL +C++H + EI + AA+ L LEP +Y++LS++YAS G WD V+++RR ++
Sbjct: 545 TLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKR 604
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
++K PGYSW++ +G +H F A D + P +I L L ++ +GY P++ SVL+DV
Sbjct: 605 VRKEPGYSWIKY-KGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDV 663
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ EK ++L HSEKLA+AFGL+ PG +R++KNLR+C DCH S++ REI+V
Sbjct: 664 EESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILV 723
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFH F+DG CSCG++W
Sbjct: 724 RDAVRFHLFKDGTCSCGDFW 743
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 200/392 (51%), Gaps = 18/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
+F + +++ W I GY G D++ +Y M ++ ++ T S + C++
Sbjct: 93 IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V LG+QI+ Q IL GF SD++VG+ ++ MY K G + +++ FDEMPER+VV +I
Sbjct: 153 CVDLGRQINGQ-ILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMI 211
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G +E + LF L +D ++WT M+TG +QN REA++ F M+ AG D
Sbjct: 212 TGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQF 271
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V++AC L + + + +NV VGSAL+DMYSKC SI A +F
Sbjct: 272 TFGSVLTACGSLLALGEGKQIHAYVIRTDHK--DNVFVGSALVDMYSKCRSIKSAETVFK 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M Q+NV S+++M++G+ +G + A+++F +M + +P+ T V+++C+++
Sbjct: 330 RMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEE 389
Query: 303 ---LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GAC 354
C + + ++ L G+ G E + ++ +M + W ALL G
Sbjct: 390 GAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVS-WTALLAGYA 448
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + L L+PD + +LS
Sbjct: 449 QFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 47/339 (13%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
++L K C E + + +++H IL + ++ N +I Y K G L + VFD +P
Sbjct: 9 ASLLKLCCESQNQTQAKKLHC-LILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+ ++ SW ++ Y+ G + +FN +P +D V+W ++GY +A+ ++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 176 M-QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M + A + + +T ++ C++ + + GFG ++V VGS L+DMY+K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFG--SDVFVGSPLVDMYTK 185
Query: 235 -------------------------------CGSIDDAYRIFVGMKQRNVFSYSSMILGF 263
CG I+++ R+F G+K+R+ S++ MI G
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245
Query: 264 AMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY--- 315
+G A+ +F +M + TF VLTAC + G + + TDH
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305
Query: 316 ---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ +VD+ + ++ A + ++MP + N W A+L
Sbjct: 306 FVGSALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAML 343
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 325/553 (58%), Gaps = 48/553 (8%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTEVLD 67
FE++ + W+ +I Y K+++ L+C MR+ + P +FT +++ +AC ++
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++LG QIH+ +L G S+++V N ++ +Y KCG
Sbjct: 323 LNLGNQIHS-CVLKVGLDSNVFVSNALMDVYAKCG------------------------- 356
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E++ LF K++VAW ++ GYVQ +A+ F M ++ VT
Sbjct: 357 ------EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVT 410
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ A A L ++ + + + + + VV ++LIDMY+KCG IDDA F
Sbjct: 411 YSSVLRASASLVALEPGRQIHSLTIKTMYN--KDSVVANSLIDMYAKCGRIDDARLTFDK 468
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +++ S++++I G+++HG A+ LF M ++ +KPN +TF+GVL+ACS+ GL
Sbjct: 469 MDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG 528
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY CMV LLGR+G +EA+K++ ++P +P+ VW ALLGAC
Sbjct: 529 RAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACV 588
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N ++ ++ A + E+EP +++LSN+YA+A WD+V+ VR+ +K +KK PG
Sbjct: 589 IHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGL 648
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E ++GV+H F GD +HPN I L L + + GY P+ VL DV D+EK+R
Sbjct: 649 SWVE-NQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKER 707
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LALAFGL+ G ++RI+KNLRIC DCH + S+++ REIV+RD RFH
Sbjct: 708 LLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFH 767
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSCG+YW
Sbjct: 768 HFRQGVCSCGDYW 780
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 47/364 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +K+ WT ++ Y +DS+ L+C MR G P +FT+SA K+C +
Sbjct: 159 RQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGL 218
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+ +H + + + DLYVG ++ +Y K
Sbjct: 219 EAFKVGKSVHGCALKVC-YDRDLYVGIALLELYTK------------------------- 252
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETD 184
+G++ A F E+P D + W+ M++ Y Q+ K +EA+E F RM Q + V +
Sbjct: 253 ------SGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPN 306
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V+ ACA L ++ N + G +NV V +AL+D+Y+KCG I+++ ++
Sbjct: 307 NFTFASVLQACASLVLLNLGNQIHSCVLKVGLD--SNVFVSNALMDVYAKCGEIENSVKL 364
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV--- 301
F G ++N +++++I+G+ G A+ LF +M+ + +P VT+ VL A + +
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVAL 424
Query: 302 --GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + + ++ T + ++D+ + G +++A +KM + W AL+
Sbjct: 425 EPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS-WNALICG 483
Query: 354 CQIH 357
IH
Sbjct: 484 YSIH 487
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D + G+ +H IL G + DL+ N ++ YV GFL
Sbjct: 18 DPNAGKSLHCH-ILKHGASLDLFAQNILLNTYVHFGFL---------------------- 54
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
E A LF+E+PL + V++ + G+ ++ + + A R+ G E +
Sbjct: 55 ---------EDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQF 105
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
++ + + V A G + VG+ALID YS CG++D A ++F
Sbjct: 106 VFTTLLKLLVSMDLADTCLSV--HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFD 163
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
G+ +++ S++ M+ +A + ++ LF M +PN T L +C+ GL+ +
Sbjct: 164 GIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN--GLEAF 221
Query: 307 GVSPST-----------DHYA--CMVDLLGRAGCLEEALKMVEKMP 339
V S D Y +++L ++G + EA + E+MP
Sbjct: 222 KVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP 267
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 297/518 (57%), Gaps = 34/518 (6%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK------ACTEVLDVSLGQ 72
L ALIR ++ LY + R G P TL +L K A ++L
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
HA + L GF L V N +I ++ G L + + D ++ LI AYA
Sbjct: 233 HAHAVKLGLAGF---LLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G + A LF+E+P ++ V+W+AMV GYVQ REA+ F RMQ GV D LVGV
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINN----VVVGSALIDMYSKCGSIDDAYRIFVG 247
++ACAQLGV++ WV G+ NN V +G+AL+DMY+KCG + A +F
Sbjct: 350 LAACAQLGVLEQGKWV------HGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKV 403
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK++NV ++++MI G AMHGR A++LF M + KP+ + FIG L AC+H GL
Sbjct: 404 MKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKG 463
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY CMVDLL R G L EA +MVEKMP++P+ +WGAL+ C+
Sbjct: 464 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCR 523
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H+N E+A+ H ELEPDK G Y++L NIYA++G +R L++ G+ K PG
Sbjct: 524 FHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGC 583
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKK 474
S +E +GVIH+F GDL+HP EI ++ R++ +GY P+ + VL D+ +EEK+
Sbjct: 584 STVE-IKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKE 642
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
L HSEK+A+AF L+ TS +RI+KNLR+C DCH
Sbjct: 643 NALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCH 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W+A++ GY+ G ++++ L+ M+ +G+ P L + AC ++
Sbjct: 297 RALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL 356
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + +++G ++ MY KCG + + +VF M E++V++WT
Sbjct: 357 GVLEQGKWVHGY-LKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT-- 413
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ G + + EA+E F +M+ GV+ D
Sbjct: 414 -----------------------------TMIKGLAMHGRGSEALELFSQMERLGVKPDD 444
Query: 186 VTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ +G + AC G++ + + + G P + ++D+ ++ G +++A +
Sbjct: 445 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKP--KIEHYGCMVDLLARNGLLNEAREM 502
Query: 245 FVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVK--TETKPN 287
M + ++I G M G R H ++L +VK E +P+
Sbjct: 503 VEKMPMKP----DALIWGALMAGCRFHKNVELAEYVVKHWIELEPD 544
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ +K KN WT +I+G + G +++ L+ M R G+ P ACT
Sbjct: 400 VFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGL 459
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V G+++ + G + M+ + + G L +R++ ++MP + D + W L+
Sbjct: 460 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALM 519
Query: 127 VAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ ++E A + EL A+ + Y + + A E M+ GV+
Sbjct: 520 AGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDK 579
Query: 184 ----DYVTLVGVI 192
V + GVI
Sbjct: 580 TPGCSTVEIKGVI 592
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 311/554 (56%), Gaps = 63/554 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ N L+ + RGY L D + + RR L + KA E
Sbjct: 83 LFDQITQPNIVLFNTMARGY---ARLNDPLRMITHFRR------CLRLVSKVKALAE--- 130
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+H + LG + ++YV T+I MY CG + SR+VFD++ E V
Sbjct: 131 ---GKQLHCFAVKLG-VSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCV-------- 178
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
VA+ A++ +N + EA+ F +Q G++ VT
Sbjct: 179 -----------------------VAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVT 215
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V+S+CA LG + W+ E + GF V V + LIDMY+KCGS+DDA +F
Sbjct: 216 MLVVLSSCALLGSLDLGRWMHEYVKKYGFD--RYVKVNTTLIDMYAKCGSLDDAVNVFRD 273
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +R+ ++S++I+ +A HG AI + +M K + +P+ +TF+G+L ACSH GL
Sbjct: 274 MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG 333
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YG+ PS HY CMVDLLGRAG L+EA K ++++P++P +W LL AC
Sbjct: 334 FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACS 393
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H N E+ + +FEL+ G+Y+I SN+ A G WDDV+ +R+ + G K PG
Sbjct: 394 THGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGC 453
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVSDEEKK 474
S +E + V+HEF AG+ H ST + +AL +L+ L++ GY P+ V Y D+ DEEK+
Sbjct: 454 SSIEVN-NVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKE 512
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
IL HSEKLA+ FGLL T PG T+R++KNLR+C DCH S + GR+I++RD RF
Sbjct: 513 IILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRF 572
Query: 535 HHFQDGKCSCGNYW 548
HHF+DGKCSCG+YW
Sbjct: 573 HHFKDGKCSCGDYW 586
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN-------NGDMESAGGLFNELP 146
+I + KC L +++ + + + T +I + N ME A LF+++
Sbjct: 29 LISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQIT 88
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+ V + M GY + P I +F R + LV + A A+ +
Sbjct: 89 QPNIVLFNTMARGYARLNDPLRMITHFRRC---------LRLVSKVKALAEGKQLH---- 135
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
G +N+ V LI+MY+ CG ID + R+F + + V +Y+++I+ A +
Sbjct: 136 ----CFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARN 191
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHY 315
RA+ A+ LF ++ + KP VT + VL++C+ +G +K YG
Sbjct: 192 NRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVN 251
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN--PEIAQIAANHLFEL 373
++D+ + G L++A+ + MP + + W A++ A H + I+ + ++
Sbjct: 252 TTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310
Query: 374 EPDKI 378
+PD+I
Sbjct: 311 QPDEI 315
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + A+I ++++L+ ++ G+ P T+ + +C +
Sbjct: 167 RRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALL 226
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ +H + + GF + V T+I MY KCG L + VF +MP+RD +W+ +
Sbjct: 227 GSLDLGRWMH-EYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAI 285
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IVAYA +GD A + NE M+ V+ D
Sbjct: 286 IVAYATHGDGFQAISMLNE-------------------------------MKKEKVQPDE 314
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEG--SGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T +G++ AC+ G+++ E G + +G + ++ ++D+ + G +D+AY+
Sbjct: 315 ITFLGILYACSHNGLVEEG---FEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYK 371
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ + +I Y + L+ M++ G + + +
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV +G+QIHAQ +LLG + DL +GN +I MY KCG L ++ F E
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSE--------- 400
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
K ++WTA++TGYVQN + EA++ F M+ AG+ D
Sbjct: 401 ----------------------KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDR 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +I A + L +I + SG+ ++V GS L+DMY+KCG +D+A R F
Sbjct: 439 ATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK--SSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +RN S++++I +A +G A AI++F M+ P+ VTF+ VL ACSH GL
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 304 KC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+C Y +SP +HYAC++D LGR GC + KM+ +MP + + +W ++L +
Sbjct: 557 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+A++AA+ LF +EP Y+ILSNIYA AG W+D + V+++++ G++K
Sbjct: 617 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 676
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + I+ F + DLT P EI+ L L + GY+P++ L+ V E K
Sbjct: 677 GYSWVEIKQK-IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 735
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
L HSE+LA+AF L+ T G +RIMKNL C DCH + S+++ R+I+VRD+ R
Sbjct: 736 LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRR 795
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 796 FHHFKDGVCSCGDYW 810
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ K+ + A++ G +G ++ L+ +MRR GI FT S++ +
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG Q+HA +L +++V N+++ Y KC L R++FDEMPERD VS+ +
Sbjct: 250 AHLLLGHQVHA-LVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AYA N + LF E+ K+ + R+ + Y + AG D
Sbjct: 309 IAAYAWNQCAATVLRLFREM---QKLGFD------------RQVLPYATMLSVAGSLPD- 352
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+G +A V G + ++G+ALIDMYSKCG +D A F
Sbjct: 353 ----------VHIGKQIHAQLVL-------LGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+++ S++++I G+ +G+ A+QLF DM + +P+ TF ++ A S
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H L G S + +VD+ + GCL+EAL+ ++MP E N W A++ A
Sbjct: 456 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF Y N + + G L +R +FD+MP +++ S ++ AY+++GD+ +A LF
Sbjct: 38 GFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF 97
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS--ACAQLGV 200
P ++ WT M+ + + +A+ F M GV D VT+ V++ C +
Sbjct: 98 LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL 157
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+A FG +V V + L+D Y K G + A R+F+ M ++ +Y++M+
Sbjct: 158 HPFA---------IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------VSPSTDH 314
+G + G A+QLF M + TF +LT + + G V ST
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 315 YACMV-----DLLGRAGCLEEALKMVEKMPVEPN 343
V D + CL++ ++ ++MP N
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDN 302
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 57/385 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK--ACTEV 65
+F ++N WT ++R + G D++SL+ +M EG+ P T++ + CT
Sbjct: 96 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV- 154
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+H I G + ++V NT++ Y K G L +R+VF EM ++D V+
Sbjct: 155 ------PSLHPFAIKF-GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVT---- 203
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ AM+ G + +A++ F M+ AG+ +
Sbjct: 204 ---------------------------YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++ A + + + V + S + NV V ++L+D YSKC +DD R+F
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVLRS--TSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M +R+ SY+ +I +A + A ++LF +M K + + +L+
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
H L G++ ++D+ + G L+ A E + W AL+ G
Sbjct: 355 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGY 413
Query: 354 CQIHRNPEIAQIAAN-HLFELEPDK 377
Q ++ E Q+ ++ L PD+
Sbjct: 414 VQNGQHEEALQLFSDMRRAGLRPDR 438
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 314/553 (56%), Gaps = 48/553 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRG-YILQGHLKDSISLYCSMRREGI-GPVSFTLSALFKA 61
+ R +F Q++ N F W ++IRG Q K+ + L+ M R G P +FT++ + KA
Sbjct: 111 YARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKA 170
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ V + GQQ+HA +L GF S +V ++ Y KC
Sbjct: 171 CSIVSALEEGQQVHAN-VLKSGFGSSPFVETALVNFYAKCE------------------- 210
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
D+ A +F+E+ ++ VAW+ M++GY + EA+ F MQ AGV
Sbjct: 211 ------------DIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGV 258
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT+V VISACA G + WV ++ + +AL++MY+KCG I+ A
Sbjct: 259 VPDEVTMVSVISACAASGALDTGKWVHAYINKQLIE--TDLELSTALVNMYAKCGCIERA 316
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M ++ ++SSMI+G A++G A A++ F M + + KPN VTFIGVL+AC+H
Sbjct: 317 KEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHS 376
Query: 302 GLKC-----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL +G+ PS + Y CMVDLL RA +E+A +VE MP+ PN +W L
Sbjct: 377 GLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTL 436
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C+ +N + +++ A L ELEP NYI+LSN+YAS W+ +S+VR+ +K G+K
Sbjct: 437 LVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIK 496
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
PG S +E D G++HEF GD +HP + E+++ L D+ R+ A G+QP + VL++V D
Sbjct: 497 AVPGCSSIEVD-GLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVD 555
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L HSE+LA+A+GLL T +RI+KNLR+C DCH S REI+VRD
Sbjct: 556 EEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRD 615
Query: 531 NMRFHHFQDGKCS 543
+RFH F +G CS
Sbjct: 616 RVRFHKFVNGSCS 628
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 20/289 (6%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP-REAIEYFERMQYAGVET-DY 185
A + GD++ A LF+++ + +W +M+ G Q+ P +E + F +M G +
Sbjct: 102 ALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNT 161
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ V+ AC+ + ++ V SGFG ++ V +AL++ Y+KC I A ++F
Sbjct: 162 FTMAFVLKACSIVSALEEGQQVHANVLKSGFG--SSPFVETALVNFYAKCEDIVLASKVF 219
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ RN+ ++S+MI G+A G + A+ LF DM K P+ VT + V++AC+ G
Sbjct: 220 DEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 279
Query: 306 YG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G + + +V++ + GC+E A ++ + MPV+ + W +++
Sbjct: 280 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGL 338
Query: 355 QIHRNPEIAQIAANHLFELEPDKIG-NYIILSNIYASAGMWDDVSRVRR 402
I+ +A+ A F +E K+ N++ + ++ VS RR
Sbjct: 339 AIN---GLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRR 384
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 331/563 (58%), Gaps = 56/563 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++ KN F+W A+++ L H +++++ M R G+ S++ + KAC
Sbjct: 304 RQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAA 363
Query: 66 LDVSLG-----QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
L +++HA I G+ +V T+I Y K G
Sbjct: 364 SASHLPASARVREMHAHAIR-RGYGLHTHVATTLIDCYAKLG------------------ 404
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
IV+YA +F +P ++ V+W+AM+ Y +N +P +AI+ F+ M +
Sbjct: 405 -----IVSYAER--------VFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASD 451
Query: 181 VE--TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + +T+V V+ ACA + + + GF + +V+ +AL+ MY KCG +
Sbjct: 452 ADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVL--NALMAMYMKCGCL 509
Query: 239 DDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ IF +G ++RNV S++S+I G+ MHG ++Q+F +M++ PN +TF+ VL
Sbjct: 510 ETGRYIFNWIG-RRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLG 568
Query: 297 ACSHVGLKC-----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
ACSHVGL Y V+P +HYACMVDLLGRAG L+EA+++++ M ++P+
Sbjct: 569 ACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQ 628
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
VWG+LLGAC+IH + E A++A +HLF+LEP GNY++L++IYA A + + V ++ LL+
Sbjct: 629 VWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLE 688
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L+K PG SW+E + ++ F + D +P E+Q +G+ + +++ +GY P+ RSVL
Sbjct: 689 EHALEKVPGCSWIEVKKK-LYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVL 747
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
YD+ +EEK+RIL+ HSEKLA+AFGL+ T G +RI KNLR+CEDCH S+ RE
Sbjct: 748 YDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDRE 807
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF++G CSC +YW
Sbjct: 808 IVVRDVNRFHHFRNGVCSCRDYW 830
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 44/263 (16%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P T +L A D +L +H + F SD ++ +I Y L +R
Sbjct: 245 APTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAAR 304
Query: 109 KVFDEMPERDVVSWTELI--VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+VFDE P +++ W ++ +A A++G+
Sbjct: 305 QVFDEAPVKNIFVWNAMLKALALADHGE-------------------------------- 332
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISAC--AQLGVIKYANWVCEI---AEGSGFGPINN 221
EA+ M GV D + + AC A + + V E+ A G+G +
Sbjct: 333 -EALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYG--LH 389
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + LID Y+K G + A R+F M RN+ S+S+MI +A + R AIQ+F +M+
Sbjct: 390 THVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMA 449
Query: 282 TETK--PNGVTFIGVLTACSHVG 302
++ PN +T + VL AC+ V
Sbjct: 450 SDADLVPNSITIVSVLHACAGVN 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 38/269 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFK 60
S+ VF + +N W+A+I Y D+I ++ M + P S T+ ++
Sbjct: 407 SYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLH 466
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDV 119
AC V + G+ +HA IL GF + V N ++ MY+KCG L R +F+ + R+V
Sbjct: 467 ACAGVNALGQGKVLHA-YILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNV 525
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSW LI Y +G F RE+++ FE M
Sbjct: 526 VSWNSLISGYGMHG--------FG-----------------------RESLQVFEEMIEE 554
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G+ + +T V V+ AC+ +G+++ + E P + ++D+ + G +D
Sbjct: 555 GISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHY--ACMVDLLGRAGRLD 612
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
+A + M+ Q + + S++ +HG
Sbjct: 613 EAVELIQSMRIQPSPQVWGSLLGACRIHG 641
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 297/518 (57%), Gaps = 34/518 (6%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK------ACTEVLDVSLGQ 72
L ALIR ++ LY + R G P TL +L K A ++L
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
HA + L GF L V N +I ++ G L + + D ++ LI AYA
Sbjct: 233 HAHAVKLGLAGF---LLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G + A LF+E+P ++ V+W+AMV GYVQ REA+ F RMQ GV D LVGV
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINN----VVVGSALIDMYSKCGSIDDAYRIFVG 247
++ACAQLGV++ WV G+ NN V +G+AL+DMY+KCG + A +F
Sbjct: 350 LAACAQLGVLEQGKWV------HGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKV 403
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK++NV ++++MI G AMHGR A++LF M + KP+ + FIG L AC+H GL
Sbjct: 404 MKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKG 463
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P +HY CMVDLL R G L EA +MVEKMP++P+ +WGAL+ C+
Sbjct: 464 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCR 523
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H+N E+A+ H ELEPDK G Y++L NIYA++G +R L++ G+ K PG
Sbjct: 524 FHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGC 583
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKK 474
S +E +GVIH+F GDL+HP EI ++ R++ +GY P+ + VL D+ +EEK+
Sbjct: 584 STVE-IKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKE 642
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
L HSEK+A+AF L+ TS +RI+KNLR+C DCH
Sbjct: 643 NALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCH 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W+A++ GY+ G ++++ L+ M+ +G+ P L + AC ++
Sbjct: 297 RALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQL 356
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + +++G ++ MY KCG + + +VF M E++V++WT
Sbjct: 357 GVLEQGKWVHGY-LKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT-- 413
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ G + + EA+E F +M+ GV+ D
Sbjct: 414 -----------------------------TMIKGLAMHGRGSEALELFSQMERLGVKPDD 444
Query: 186 VTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ +G + AC G++ + + + G P + ++D+ ++ G +++A +
Sbjct: 445 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKP--KIEHYGCMVDLLARNGLLNEAREM 502
Query: 245 FVGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVK--TETKPN 287
M + ++I G M G R H ++L +VK E +P+
Sbjct: 503 VEKMPMKP----DALIWGALMAGCRFHKNVELAEYVVKHWIELEPD 544
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ +K KN WT +I+G + G +++ L+ M R G+ P ACT
Sbjct: 400 VFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGL 459
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V G+++ + G + M+ + + G L +R++ ++MP + D + W L+
Sbjct: 460 VDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALM 519
Query: 127 VAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ ++E A + EL A+ + Y + + A E M+ GV+
Sbjct: 520 AGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVD 578
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 320/572 (55%), Gaps = 69/572 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S R VF+++ +N WTA+IRGY+ +G ++++ L+ M + VS+
Sbjct: 40 MISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV--VSW------- 90
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
T++LGG D G + +R++FD MP +DVV
Sbjct: 91 -----------------TVMLGGLIED--------------GRVDEARQLFDMMPVKDVV 119
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG-------------YVQNAKPR 167
+ T +I + G + A +F+E+P ++ VAWT+M++G Y +
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EA+ F MQ GV + +++ V+S C L + + V S F ++ V S
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI--DIYVSSV 237
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI MY KCG + A R+F +++ ++S+I G+A HG A+++F DM + P+
Sbjct: 238 LITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPD 297
Query: 288 GVTFIGVLTACSHVG-----------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+TFIGVL+ACS+ G +K Y V P T+HYACMVDLLGRAG L EA+ ++
Sbjct: 298 EITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLI 357
Query: 336 EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
E MPVE + VWGALLGAC+ H+N ++A+IAA L +LEP+ G YI+LSN+Y+S W
Sbjct: 358 ENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWK 417
Query: 396 DVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT-HPNSTEIQQALGDLLDRLQA 454
DV +R+ ++ L+K+PG SW+E D+ V H F G T HP I + LG L L+
Sbjct: 418 DVVELRKTMRAKNLRKSPGCSWIEVDKKV-HIFSGGGSTSHPEHEMILKKLGKLGALLRE 476
Query: 455 DGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLF 514
GY P+ V++DV +EEK L HSEKLA+A+GLL G +R+MKNLR+C D H
Sbjct: 477 AGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHST 536
Query: 515 MCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
+ +QV GREI++RD RFHHF+DG CSC +
Sbjct: 537 IKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+RK+FD+MPE + +SW L+ Y NG + A +F+++P ++ V+WTAM+ GYVQ
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
EA F RM V + V L G+I + G + A + ++ P+ +VV +
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLI----EDGRVDEARQLFDMM------PVKDVVAST 122
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG-------------FAMHGRAHAAI 273
+ID G + +A IF M QRNV +++SMI G + G A+
Sbjct: 123 NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEAL 182
Query: 274 QLFGDMVKTETKPNGVTFIGVLTAC 298
LF M + +P+ + I VL+ C
Sbjct: 183 ALFSLMQREGVRPSFPSVISVLSVC 207
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 310/556 (55%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F ++ K+ W +I ++++ L M+REG FT+S++ C
Sbjct: 98 RKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFK 157
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ Q+HA +I S+ +VG ++ +Y KC
Sbjct: 158 CAILECMQLHAFSIK-AAIDSNCFVGTALLHVYAKCS----------------------- 193
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ A +F +P K+ V W++M+ GYVQN EA+ F Q G + D
Sbjct: 194 --------SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDP 245
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +SACA L + V I+ SGFG +N+ V S+LIDMY+KCG I +AY +F
Sbjct: 246 FMISSAVSACAGLATLIEGKQVHAISHKSGFG--SNIYVSSSLIDMYAKCGCIREAYLVF 303
Query: 246 VG-MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
G ++ R++ +++MI GFA H RA A+ LF M + P+ VT++ VL ACSH+GL
Sbjct: 304 QGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLH 363
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + +SPS HY+CM+D+LGRAG + +A ++E+MP +WG+LL
Sbjct: 364 EEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLA 423
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+I+ N E A+IAA +LFE+EP+ GN+I+L+NIYA+ WD+V+R R+LL+ T ++K
Sbjct: 424 SCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKE 483
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E + IH F G+ HP +I L +L+ L+ Y+ + + L+DV +
Sbjct: 484 RGTSWIE-IKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENR 542
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLA+ FGL+ +RI+KNLRIC DCH FM S+ REI+VRD
Sbjct: 543 KQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTN 602
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG +W
Sbjct: 603 RFHHFKDGFCSCGEFW 618
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 60/327 (18%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L L + C + G+ HAQ I +G D+ N +I MY KC +
Sbjct: 45 NLHYLLQLCAKTRSSMGGRACHAQIIRIG-LEMDILTSNMLINMYSKCSLV--------- 94
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+SA FNE+P+K V+W ++ QNA+ REA++
Sbjct: 95 ----------------------DSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLL 132
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI-------NNVVVGS 226
+MQ G + T+ V+ CA + C I E +N VG+
Sbjct: 133 IQMQREGTPFNEFTISSVLCNCA---------FKCAILECMQLHAFSIKAAIDSNCFVGT 183
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
AL+ +Y+KC SI DA ++F M ++N ++SSM+ G+ +G A+ +F +
Sbjct: 184 ALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQ 243
Query: 287 NGVTFIGVLTACSHV-----GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMV 335
+ ++AC+ + G + + +S + + ++D+ + GC+ EA +
Sbjct: 244 DPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVF 303
Query: 336 EKMPVEPNGGVWGALLGACQIH-RNPE 361
+ + + +W A++ H R PE
Sbjct: 304 QGVLEVRSIVLWNAMISGFARHARAPE 330
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 318/553 (57%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE++ ++ WT++I G L G ++++ ++ M R G+ P T + + AC ++
Sbjct: 158 LFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+LG Q+H + LG F + F+ S LI
Sbjct: 218 FNLGVQVHGHVVKLGCFFHE---------------FISVS-----------------LIT 245
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YAN +E A +FNE K+ V WTA++T YV N K ++A+ F M G + T
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQST 305
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ AC L + + +A G +V VG++L+ MY++CG+++ A +F
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLE--TDVFVGNSLVVMYTECGNVNSAVAVFRN 363
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++++ S++S+I+G A HG A+ F M++ PN +TF G+L+ACS G+
Sbjct: 364 INEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKG 423
Query: 304 KCYGVSPST--------DHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+C+ S HYACMVD+LGR G L+EA ++V MPV+ N +W ALL AC+
Sbjct: 424 RCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACR 483
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+A+ AA H+ +LEP+ Y++LSNIYASAG W DVSR+R +K GL K PG
Sbjct: 484 VHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGS 543
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+ RG HEF + D +HP S I + L L +L+ GY P+ + L+DV DE+K+
Sbjct: 544 SWVVL-RGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEE 602
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LA+AFGL++T G+T+ +MKNLR+C DCH + S+++GR+IVVRD+ RFH
Sbjct: 603 MLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFH 662
Query: 536 HFQDGKCSCGNYW 548
HF++G CSC +YW
Sbjct: 663 HFKNGICSCSDYW 675
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 151/298 (50%), Gaps = 21/298 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+++ N L+T +I GY L D++ L+ M + + +++ K C +
Sbjct: 32 RLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDV----VSWNSMIKGCLDC 87
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ + ++ + ++ TM+ Y+K G + ++++F +M +DV +W +
Sbjct: 88 GNLGMATRLFDEMP-----EKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAM 142
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y NG +E LF E+P++D ++WT+M+ G N K EA+ F++M +GVE +
Sbjct: 143 VHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTW 202
Query: 186 VTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
T V+SACA LGV + + V G + + +LI Y+ C I+
Sbjct: 203 STFACVLSACANAVEFNLGVQVHGHVV-------KLGCFFHEFISVSLITFYANCMKIEH 255
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A++IF +NV +++++ + + + A+++FGDM K PN TF L AC
Sbjct: 256 AHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC 313
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 41/216 (18%)
Query: 85 TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNE 144
+ +L++ MI Y + L + K+FD M RDVVSW +I + G++ A LF+E
Sbjct: 40 SPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDE 99
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
+P K+ ++WT MV GY++ + A F M
Sbjct: 100 MPEKNVISWTTMVNGYLKFGRVELAQRLFLDMH--------------------------- 132
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
+ +V +A++ Y + G +++ R+F M R+V S++SMI G
Sbjct: 133 --------------VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLD 178
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++G++ A+ +F M+++ +P TF VL+AC++
Sbjct: 179 LNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACAN 214
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 322/563 (57%), Gaps = 50/563 (8%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S + VF+ ++ +N W ++I G++ G ++ L+ MR EG+ + + K
Sbjct: 243 MVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIK 302
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C + ++S +Q+H Q I G SD D+
Sbjct: 303 LCANIKEMSFAKQLHCQVIKNG---SDF-----------------------------DLN 330
Query: 121 SWTELIVAYANNGDMESAGGLFNELP-LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
T L+VAY+ +++ A LF + +++ V+WTA+++GYVQN + A+ F +M+
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390
Query: 180 -GVETDYVTLVGVISACAQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GVE + T V++ACA ++ + SGF N + V SAL+ MY+K G+
Sbjct: 391 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS--NALCVSSALVTMYAKRGN 448
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+ A +F R++ S++SMI G+A HG ++++F +M + +G+TFIGV++A
Sbjct: 449 IESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISA 508
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+H GL K Y + P+ +HY+CMVDL RAG LE+A+ ++ KMP
Sbjct: 509 CTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGAT 568
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL AC++H N ++ ++AA L L+P Y++LSNIYA+AG W + ++VR+L+
Sbjct: 569 IWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMD 628
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
M +KK GYSW+E + F AGDL+HP S I L +L RL+ GY P+ + VL
Sbjct: 629 MKKVKKEAGYSWIEV-KNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVL 687
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV +E K+ IL HSE+LA+AFGL+ T PG ++I+KNLR+C DCH + S++ GR+
Sbjct: 688 HDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRD 747
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD+ RFHHF+ G CSCG+YW
Sbjct: 748 IVVRDSNRFHHFKGGSCSCGDYW 770
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 40/296 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++++ KN WT+L+ GY G + ++ L+ M+ EGI P FT +A+
Sbjct: 149 VFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGA 208
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G Q+H ++ G S ++VGN+M+ MY K + ++ VFD M R+ VSW +I
Sbjct: 209 VEKGVQVHT-MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMI- 266
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G+V N EA E F RM+ GV+
Sbjct: 267 ------------------------------AGFVTNGLDLEAFELFYRMRLEGVKLTQTI 296
Query: 188 LVGVISACAQLGVIKYANWV-CE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VI CA + + +A + C+ I GS F ++ + +AL+ YSKC IDDA+++F
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDF----DLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 246 VGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS 299
M +NV S++++I G+ +GR A+ LF M + E +PN TF VL AC+
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACA 408
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 34/268 (12%)
Query: 34 KDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
K++++L+ +RR G +LS + K C + D +G+Q+H Q I G F D+ VG +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCG-FVEDVSVGTS 132
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY+K + +VFDEM ++VVSWT L+ Y NG NE
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG--------LNE--------- 175
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+A++ F +MQ G++ + T V+ A G ++ V +
Sbjct: 176 --------------QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
SG + + VG+++++MYSK + DA +F M+ RN S++SMI GF +G A
Sbjct: 222 SGLD--STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAF 279
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHV 301
+LF M K F V+ C+++
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANI 307
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
LF+E P + ++ + +N + +EA+ F ++ +G TD +L V+ C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 201 IKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
V C+ + G + +V VG++L+DMY K S++D R+F M+ +NV S++S+
Sbjct: 108 RIVGKQVHCQCIKC---GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST 312
+ G+ +G A++LF M KPN TF VL + G GV T
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 325/578 (56%), Gaps = 38/578 (6%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRRE-----GIGPVSFTLSALF 59
R VFE++ + W ++ GY + G +K++ L+ + I V + S
Sbjct: 93 RNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGV 152
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTS--------DLYV---------GNTMIGMYVKCG 102
KA + + I + L+ GF DL+ + MI YV+ G
Sbjct: 153 KAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L + +++ + + VV T ++ Y G +E A +F + +K+ V W +M+ GYV+
Sbjct: 213 DLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N + + ++ F+ M + V + ++L V+ C+ L + + ++ S +
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLS--KDT 330
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
++LI MY KCG +D A+++F+ M +++V ++++MI G+A HG A+ LF M
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNG 390
Query: 283 ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEE 330
KP+ +TF+ V+ AC+H G K +G+ HY C++DLLGRAG L+E
Sbjct: 391 TMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDE 450
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYAS 390
A+ ++++MP P+ ++G LLGAC+IH+N ++A+ AA +L L+P Y+ L+NIYA+
Sbjct: 451 AVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAA 510
Query: 391 AGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLD 450
WD V++VR+++K + K PGYSW+E + V HEFR+ D HP T I + L +L
Sbjct: 511 TNKWDQVAKVRKMMKEHNVVKIPGYSWIE-IKSVTHEFRSSDRLHPELTSIHKKLNELDG 569
Query: 451 RLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICED 510
+++ GY P+L L+DV +E K+++L+ HSEKLA+AFGL+ T+PG +R+ KNLR+C D
Sbjct: 570 KMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGD 629
Query: 511 CHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
CH + S + REI+VRD RFHHF++G CSCG+YW
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 64/342 (18%)
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEM------------------------------- 114
SD+ N I +V+ L +R VF++M
Sbjct: 71 SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130
Query: 115 -PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
PE D VS+ ++V Y + +++A FN++P+KD +W +++G+ QN + ++A + F
Sbjct: 131 IPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLF 190
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M E + V+ +IS + G ++ A E+ + G + +VVV +A++ Y
Sbjct: 191 SVMP----EKNGVSWSAMISGYVEHGDLEAAE---ELYKNVG---MKSVVVETAMLTGYM 240
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K G ++ A RIF M +N+ +++SMI G+ + RA +++F M+++ +PN ++
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300
Query: 294 VLTACSHVGLKCYG--------VSP-STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEP 342
VL CS++ G SP S D AC ++ + + G L+ A K+ +MP
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RK 359
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKI 378
+ W A++ H A A HLF+ ++PD I
Sbjct: 360 DVITWNAMISGYAQHG----AGRKALHLFDKMRNGTMKPDWI 397
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 307/541 (56%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GY ++ L+ M ++G FTL+ + K C + ++ G+Q+HA I
Sbjct: 492 WNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAI 551
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G+ DL+V + ++ MYVKCG DM +A
Sbjct: 552 K-SGYDLDLWVSSGILDMYVKCG-------------------------------DMSAAQ 579
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
F+ +P+ D VAWT +++G ++N + A+ F +M+ GV D T+ + A + L
Sbjct: 580 FAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLT 639
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + A ++ VG++L+DMY+KCGSIDDAY +F ++ N+ ++++M
Sbjct: 640 ALEQGRQIH--ANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 697
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
++G A HG A+QLF M KP+ VTFIGVL+ACSH GL + YG
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYG 757
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY+C+ D LGRAG ++EA +++ M +E + ++ LL AC++ + E + A
Sbjct: 758 IKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVA 817
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L ELEP Y++LSN+YA+A WD++ R ++K +KK+PG+SW+E + IH
Sbjct: 818 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEV-KNKIHL 876
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F D ++P + I + + D++ ++ +GY P L DV +EEK+R L HSEKLA+A
Sbjct: 877 FVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVA 936
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGLL+T P +R++KNLR+C DCH M S+V REIV+RD RFH F+DG CSCG+Y
Sbjct: 937 FGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDY 996
Query: 548 W 548
W
Sbjct: 997 W 997
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 179/425 (42%), Gaps = 58/425 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLK-DSISLYCSMRREGIGPVSFTLSALFKAC 62
R VF + ++ W ++I G I Q L+ +++ L+ + R G+ P +T++++ KA
Sbjct: 375 LARTVFNNMSERDLISWNSVIAG-IAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAA 433
Query: 63 TEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + + +SL +QIH I +D +V
Sbjct: 434 SSLPEGLSLSKQIHVHAIKTNN-VADSFVS------------------------------ 462
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
T LI AY+ N M+ A LF D VAW AM++GY Q+ + +E F M G
Sbjct: 463 -TALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+D TL V+ C L I V A SG+ ++ V S ++DMY KCG + A
Sbjct: 521 RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAA 578
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
F + + +++++I G +G A+ +F M P+ T + A S
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638
Query: 300 -------HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEA---LKMVEKMPVEPNGGVW 347
+ ++ ++D + +VD+ + G +++A K +E M N W
Sbjct: 639 TALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM----NITAW 694
Query: 348 GALL-GACQIHRNPEIAQIAAN-HLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
A+L G Q E Q+ ++PDK+ +LS S + + +R + +
Sbjct: 695 NAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHR 754
Query: 406 MTGLK 410
G+K
Sbjct: 755 DYGIK 759
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 47/283 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S + F+ + + WT LI G I G + ++ ++ MR G+ P FT++ L KA
Sbjct: 576 SAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKAS 635
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + G+QIHA + L TSD +VG +++ MY KCG + + +F + ++ +W
Sbjct: 636 SCLTALEQGRQIHANALKLNC-TSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 694
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++V G Q+ + +EA++ F++M+ G++
Sbjct: 695 NAMLV-------------------------------GLAQHGEGKEALQLFKQMESLGIK 723
Query: 183 TDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT +GV+SAC+ G++ A ++ + G P + S L D + G + +A
Sbjct: 724 PDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKP--EIEHYSCLADALGRAGLVKEA 781
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
N+ SM +M+ AA ++ GD TET
Sbjct: 782 ---------ENLIDSMSMEASASMYRTLLAACRVQGD---TET 812
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 168/385 (43%), Gaps = 60/385 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQG-----HLKDSISLYCSMRREGIGPVSFTLSA 57
++ R VF+++ ++ W +++ Y ++K++ L+ +R++ + TLS
Sbjct: 98 TYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSP 157
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ K C V + H + G D +V ++ +Y+K G + R +F+EMP R
Sbjct: 158 MLKLCLHSGYVCASESFHGYACKI-GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR 216
Query: 118 DVVSWTELIVAYANNG------DMESA---GGLF-NELPLK------------------- 148
DVV W ++ AY G D+ SA GL NE+ L+
Sbjct: 217 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFE 276
Query: 149 ---------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+ ++ +++GY+ + ++ F M + +E D VT + V++ +L
Sbjct: 277 NGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLD 336
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ V +A G + + V ++LI+MY K I A +F M +R++ S++S+
Sbjct: 337 SLALGQQVHCMALKLGLDLM--LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSV 394
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------------HV-GLKCY 306
I G A A+ LF +++ KP+ T VL A S HV +K
Sbjct: 395 IAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTN 454
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEA 331
V+ S A ++D R C++EA
Sbjct: 455 NVADSFVSTA-LIDAYSRNRCMKEA 478
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 39/230 (16%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ LG+ HA+ + L + ++ N +I MY KCG L +R+VFD+MPERD+VSW ++
Sbjct: 61 DLMLGKCTHARILALEE-NPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSIL 119
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AYA + + G V+N K EA F ++ V T +
Sbjct: 120 AAYAQSSE------------------------GVVENVK--EAFLLFRILRQDVVYTSRM 153
Query: 187 TLVGVISACAQLGVI----KYANWVCEIA-EGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
TL ++ C G + + + C+I +G F V AL+++Y K G + +
Sbjct: 154 TLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDF-------VAGALVNIYLKFGKVKEG 206
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
+F M R+V ++ M+ + G AI L + PN +T
Sbjct: 207 RVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 139/354 (39%), Gaps = 68/354 (19%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
++ GY+ G + + M + T + + ++LGQQ+H + LG
Sbjct: 293 ILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLG 352
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
L V N++I MY K +G +R VF+ M ERD++S
Sbjct: 353 -LDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLIS--------------------- 390
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
W +++ G Q+ EA+ F ++ G++ D+ T+ V+ A + L
Sbjct: 391 ----------WNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSL---- 436
Query: 203 YANWVCEIAEGSGFG--------PINNVV---VGSALIDMYSKCGSIDDAYRIFVGMKQR 251
EG NNV V +ALID YS+ + +A +F G
Sbjct: 437 --------PEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNF 487
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLK 304
++ ++++M+ G+ H ++LF M K + + T VL C + +
Sbjct: 488 DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547
Query: 305 CYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
Y + D + ++D+ + G + A + +PV P+ W L+ C
Sbjct: 548 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGC 600
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 331/563 (58%), Gaps = 61/563 (10%)
Query: 6 RLVFEQVKYKNPFL-WTALIRGYILQGHLKDSISLYCSMRRE-------GIGPVSFTLSA 57
R VF+++ NP + + A+I GY ++ L+ MRRE + + TL +
Sbjct: 109 RKVFDEMP--NPTICYNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLS 166
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L C+ +++G +H + G F +DL V N+++ MYVKCG
Sbjct: 167 LVSGCSVATHLTIGVCLHGCCVRFG-FVTDLAVANSLVTMYVKCG--------------- 210
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
++E A +F+E+ ++D + W AM++GY QN R +E + M+
Sbjct: 211 ----------------EVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMK 254
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+GV D VTL+GV+SACA LG V E GFG N + +AL++MY++CG+
Sbjct: 255 LSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGC--NPFLRNALVNMYARCGN 312
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ A +F +++V S++++I G+ +HG A++LF +MV++ +P+ F+ VL+A
Sbjct: 313 LTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSA 372
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH GL + YG+ P +HY+C+VDLLGRAG LEEA+ +++ M V+P+G
Sbjct: 373 CSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGA 432
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
VWGALLGAC+IH+N EIA++A H+ ELEP IG Y++LSNIY A + VSRVR +++
Sbjct: 433 VWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMR 492
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L+K+PGYS++E +G ++ F +GDL+HP + +I + L D L+ L + + PN +
Sbjct: 493 ERKLRKDPGYSYVEY-KGKMNLFYSGDLSHPQTKQIYRML-DELESLVKEVHPPNEKC-- 548
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
EE HSEKLA+AF LL T G + +MKNLR+C DCHLF+ S+++ R+
Sbjct: 549 -QGRSEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQ 607
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
+VRD RFHHF+DG CSC +YW
Sbjct: 608 FIVRDATRFHHFRDGICSCKDYW 630
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 190/417 (45%), Gaps = 58/417 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +R Q +++++LY M R P +FT L K+C + Q+HA I
Sbjct: 22 WNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHVI 81
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G D Y +++I Y KC +RKVFDEMP
Sbjct: 82 RTGS-QPDPYTRSSLINTYAKCSLHHHARKVFDEMP------------------------ 116
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-------AGVETDYVTLVGVI 192
+ + AM++GY N+KP A+ F +M+ V + VTL+ ++
Sbjct: 117 --------NPTICYNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLV 168
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
S C+ + VC FG + ++ V ++L+ MY KCG ++ A ++F M R+
Sbjct: 169 SGCSVATHLTIG--VCLHGCCVRFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRD 226
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST 312
+ ++++MI G+A +G A ++++ +M + + VT +GV++AC+++G + G
Sbjct: 227 LITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADAVTLLGVMSACANLGAQGIGREVER 286
Query: 313 DH----YAC-------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+ + C +V++ R G L A ++ ++ E + W A++G IH + E
Sbjct: 287 EIERRGFGCNPFLRNALVNMYARCGNLTRAREVFDRSG-EKSVVSWTAIIGGYGIHGHGE 345
Query: 362 IAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDD-VSRVRRLLKMTGLKKNPGY 415
+A + + E + PDK +LS + AG+ D + + + + GL+ P +
Sbjct: 346 VALELFDEMVESAVRPDKTVFVSVLSAC-SHAGLTDRGLEYFKEMERKYGLQPGPEH 401
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 307/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W +++ GY G + + L+ + I T+ ++ AC +
Sbjct: 176 RHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +G+ I + I+ G + + ++I MY KCG
Sbjct: 236 ANLEIGELI-GEYIVSKGLRRNNTLTTSLIDMYAKCG----------------------- 271
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+++A LF+E+ +D VAW+AM++GY Q + +EA+ F MQ V +
Sbjct: 272 --------QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+V V+ +CA LG + WV + V +G+ LID Y+KCG ID + +F
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKL--TVTLGTQLIDFYAKCGYIDRSVEVF 381
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +NVF+++++I G A +G A++ F M++ + KPN VTFIGVL+ACSH L
Sbjct: 382 KEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVD 441
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + + P +HY CMVD+LGRAG LEEA + ++ MP PN VW LL +
Sbjct: 442 QGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS 501
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ H+N E+A+ + H+ LEP G+YI+LSN YA G +D RVR L+K +KK P
Sbjct: 502 CRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIP 561
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E D GV+HEF + D H +S EI AL ++ +++ GY PN + +E K
Sbjct: 562 GCSLIELD-GVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESK 620
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ + HSEKLA+A+GL+ TSP T+RI KNLR+C DCH SQV R I+VRD R
Sbjct: 621 ETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNR 680
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 681 FHHFKDGLCSCNDYW 695
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 172/355 (48%), Gaps = 46/355 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + + +IRG + +++ L+ M + + FT S++ KAC+ +
Sbjct: 77 IFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKA 136
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HA IL GF S+ +V NT+I MY CG +G +R VFD MPER +V+W ++
Sbjct: 137 LREGEQVHA-LILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLS 195
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y NG W E ++ F ++ +E D VT
Sbjct: 196 GYTKNG------------------LWD-------------EVVKLFRKILELRIEFDDVT 224
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ V+ AC +L ++ + E G N + ++LIDMY+KCG +D A ++F
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLR--RNNTLTTSLIDMYAKCGQVDTARKLFDE 282
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
M +R+V ++S+MI G+A R A+ LF +M K PN VT + VL +C+ +G
Sbjct: 283 MDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETG 342
Query: 303 ------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+K + + ++D + G ++ ++++ ++M + N W AL+
Sbjct: 343 KWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALI 396
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 24/300 (8%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R++ D + V+ L++ ++ A +FN + + A+ M+ G P
Sbjct: 47 TRRLLDPIITEAVLESAALLLP----DTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSP 102
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
A+ F++M V+ D T V+ AC+++ ++ V + SGF +N V +
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFK--SNEFVEN 160
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
LI MY+ CG I A +F GM +R++ +++SM+ G+ +G ++LF +++ +
Sbjct: 161 TLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEF 220
Query: 287 NGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMV 335
+ VT I VL AC + + G+ + ++D+ + G ++ A K+
Sbjct: 221 DDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLF 280
Query: 336 EKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELEPDKI-GNYIILSNIYASAGM 393
++M + + W A++ G Q R E A N E++ + N + + ++ S M
Sbjct: 281 DEMD-KRDVVAWSAMISGYAQADRCKE----ALNLFHEMQKGNVYPNEVTMVSVLYSCAM 335
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 322/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +FE + + ++ ++ RGY + + SL+ + +GI P ++T +L KAC
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+Q+H ++ LG ++YV T+I MY +C + +R VFD + E VV
Sbjct: 140 AVAKALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV-- 196
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ AM+TGY + +P EA+ F MQ ++
Sbjct: 197 -----------------------------CYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +TL+ V+S+CA LG + W+ + A+ F V V +ALIDM++KCGS+DDA
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAV 285
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M+ ++ ++S+MI+ +A HG+A ++ +F M +P+ +TF+G+L ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 303 ------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ +G+ PS HY MVDLL RAG LE+A + ++K+P+ P +W L
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC H N ++A+ + +FEL+ G+Y+ILSN+YA W+ V +R+++K
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVS 469
K PG S +E + V+HEF +GD +T++ +AL +++ L+ GY P+ V++ +++
Sbjct: 466 KVPGCSSIEVN-NVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+EK+ L HSEKLA+ FGLL T PG T+R++KNLR+C DCH S + GR++V+R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSCG++W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 120 VSWTELIVAYANNGDMES----AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
VS+ ++ + ES A LF + D V + +M GY + P E F
Sbjct: 60 VSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE 119
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ G+ D T ++ ACA ++ + ++ G +NV V LI+MY++C
Sbjct: 120 ILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD--DNVYVCPTLINMYTEC 177
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+D A +F + + V Y++MI G+A R + A+ LF +M KPN +T + VL
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 296 TACSHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
++C+ +G + Y S Y ++D+ + G L++A+ + EKM + +
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DT 296
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLF--ELEPDKI 378
W A++ A H E + + + ++PD+I
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 312/562 (55%), Gaps = 59/562 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A I + G K++I + RR G P S T AC++
Sbjct: 163 RKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDG 222
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L + LG Q+H + GF +D+ V N +I Y KC
Sbjct: 223 LLLDLGMQMHG-LVFRSGFDTDVSVYNGLIDFYGKCK----------------------- 258
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ S+ +F E+ +K+ V+W ++V YVQN + +A + R + VET
Sbjct: 259 --------QIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSD 310
Query: 186 VTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ V+SACA +LG +A+ V E N+ VGSAL+DMY KCG I+D
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVE-------RNIFVGSALVDMYGKCGCIED 363
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE--TKPNGVTFIGVLTAC 298
+ + F M ++N+ + +S+I G+A G+ A+ LF DM PN +TF+ +L+AC
Sbjct: 364 SEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSAC 423
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S G YG+ P +HY+C+VD+LGRAG +E+A + ++KMP++P V
Sbjct: 424 SRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISV 483
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGAL AC++H P + +AA +LF+L+P GN+++LSN +A+AG W + + VR +K
Sbjct: 484 WGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKG 543
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK GYSW+ + +H F+A D +H + EIQ L L ++++A GY+P+L+ LY
Sbjct: 544 VGIKKGAGYSWITV-KNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLY 602
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ +EEK + HSEKLALAFGL+ +RI KNLRIC DCH F S + REI
Sbjct: 603 DLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREI 662
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRDN RFH F+DG CSC +YW
Sbjct: 663 IVRDNNRFHRFKDGICSCKDYW 684
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLV +N WT+L+ G GH ++ + MRREG+ P FT +FKA +
Sbjct: 62 RLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASL 121
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+QIHA + G D++VG + MY K +RK+FDE+PER++ +
Sbjct: 122 RLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET---- 176
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W A ++ V + +P+EAIE F + G + +
Sbjct: 177 ---------------------------WNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNS 209
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T G ++AC+ ++ + + SGF +V V + LID Y KC I + IF
Sbjct: 210 ITFCGFLNACSDGLLLDLGMQMHGLVFRSGFD--TDVSVYNGLIDFYGKCKQIRSSEIIF 267
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +N S+ S++ + + A L+ K + + VL+AC+ +
Sbjct: 268 AEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLE 327
Query: 303 ----LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + V + + +VD+ G+ GC+E++ + ++MP E N +L+G
Sbjct: 328 LGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTLNSLIG 384
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 48/352 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L L K + LG+ +HA+ + ++ N +I MY K +R V
Sbjct: 8 ALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
P R+VVS WT++V+G QN A+ F
Sbjct: 68 TPARNVVS-------------------------------WTSLVSGLAQNGHFSTALFEF 96
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M+ GV + T V A A L + + +A G I +V VG + DMY
Sbjct: 97 FEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCG--RILDVFVGCSAFDMYC 154
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K DDA ++F + +RN+ ++++ I GR AI+ F + + +PN +TF G
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCG 214
Query: 294 VLTACS-----HVGLKCYGV------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L ACS +G++ +G+ Y ++D G+ + + + +M ++
Sbjct: 215 FLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMK- 273
Query: 343 NGGVWGALLGA-CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
N W +L+ A Q H + + + + E+ + +++I S + A AGM
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV--ETSDFMISSVLSACAGM 323
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ + +I Y + L+ M++ G + + +
Sbjct: 489 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 548
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV +G+QIHAQ +LLG + DL +GN +I MY KCG L ++ F E
Sbjct: 549 PDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSE--------- 598
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
K ++WTA++TGYVQN + EA++ F M+ AG+ D
Sbjct: 599 ----------------------KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDR 636
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +I A + L +I + SG+ ++V GS L+DMY+KCG +D+A R F
Sbjct: 637 ATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK--SSVFSGSVLVDMYAKCGCLDEALRTF 694
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M +RN S++++I +A +G A AI++F M+ P+ VTF+ VL ACSH GL
Sbjct: 695 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 754
Query: 304 KC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+C Y +SP +HYAC++D LGR GC + KM+ +MP + + +W ++L +
Sbjct: 755 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 814
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+A++AA+ LF +EP Y+ILSNIYA AG W+D + V+++++ G++K
Sbjct: 815 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 874
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+E + I+ F + DLT P EI+ L L + GY+P++ L+ V E K
Sbjct: 875 GYSWVEIKQK-IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 933
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
L HSE+LA+AF L+ T G +RIMKNL C DCH + S+++ R+I+VRD+ R
Sbjct: 934 LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRR 993
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 994 FHHFKDGVCSCGDYW 1008
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 78/413 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK--ACTEV 65
+F ++N WT ++R + G D++SL+ +M EG+ P T++ + CT
Sbjct: 310 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV- 368
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+H I G + ++V NT++ Y K G L +R+VF EM ++D V++ +
Sbjct: 369 ------PSLHPFAIKF-GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 421
Query: 126 IVAYANNGDMESAGGLFNEL--------PL------------------------------ 147
++ + G A LF + PL
Sbjct: 422 MMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSK 481
Query: 148 ----------------KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+D V++ ++ Y N + F MQ G + + +
Sbjct: 482 CDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATM 541
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
+S L + + A+ G + ++G+ALIDMYSKCG +D A F ++
Sbjct: 542 LSVAGSLPDVHIGKQIH--AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEK 599
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------H 300
+ S++++I G+ +G+ A+QLF DM + +P+ TF ++ A S H
Sbjct: 600 SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLH 659
Query: 301 VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
L G S + +VD+ + GCL+EAL+ ++MP E N W A++ A
Sbjct: 660 SYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 711
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF Y N + + G L +R +FD+MP +++ S ++ AY+++GD+ +A LF
Sbjct: 252 GFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF 311
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS--ACAQLGV 200
P ++ WT M+ + + +A+ F M GV D VT+ V++ C +
Sbjct: 312 LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL 371
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+A FG +V V + L+D Y K G + A R+F+ M ++ +Y++M+
Sbjct: 372 HPFA---------IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 422
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMV- 319
+G + G A+QLF M + G H+ + S ST V
Sbjct: 423 MGCSKEGLHTQALQLFAAMRRA----------GYSRHPLHLLQYSHSRSRSTSVLNVFVN 472
Query: 320 ----DLLGRAGCLEEALKMVEKMPVEPN 343
D + CL++ ++ ++MP N
Sbjct: 473 NSLLDFYSKCDCLDDMRRLFDEMPERDN 500
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 293/500 (58%), Gaps = 51/500 (10%)
Query: 97 MYVKC---GFLGCSRKVFDEMPERDVVSWTELIVAY------------------------ 129
MY KC G + SRKVF++MPE +V+SWT +I AY
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC 60
Query: 130 ---------ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
A +G ME A F+ L K+ V++ A+V GY +N K EA F + G
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ T ++S A +G + + G+ +N + +ALI MYS+CG+I+
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK--SNQCICNALISMYSRCGNIEA 178
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A+++F M+ RNV S++SMI GFA HG A A+++F M++T TKPN +T++ VL+ACSH
Sbjct: 179 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 238
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
VG+ K +G+ P +HYACMVDLLGR+G L EA++ + MP+ + VW
Sbjct: 239 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 298
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LLGAC++H N E+ + AA + E EPD YI+LSN++ASAG W DV ++R+ +K
Sbjct: 299 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 358
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
L K G SW+E + V H F G+ +HP + +I Q L L +++ GY P+ VL+D+
Sbjct: 359 LIKEAGCSWIEVENRV-HRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDI 417
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+E+K++ L HSEK+A+AFGL++TS +RI KNLR+C DCH + S GREIVV
Sbjct: 418 EEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVV 477
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD+ RFHH ++G CSC +YW
Sbjct: 478 RDSNRFHHIKNGVCSCNDYW 497
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 32/196 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+ + KN + A++ GY +++ L+ + GIG +FT ++L +
Sbjct: 79 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 138
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIH + +L GG+ S+ + N +I MY +CG + + +VF+EM +R+V+SWT +
Sbjct: 139 GAMGKGEQIHGR-LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 197
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I TG+ ++ A+E F +M G + +
Sbjct: 198 I-------------------------------TGFAKHGFATRALEMFHKMLETGTKPNE 226
Query: 186 VTLVGVISACAQLGVI 201
+T V V+SAC+ +G+I
Sbjct: 227 ITYVAVLSACSHVGMI 242
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ +N WT++I G+ G ++ ++ M G P T A+ AC+ V
Sbjct: 182 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 241
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
+S GQ+ G + M+ + + G L + + + MP D + W L+
Sbjct: 242 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301
Query: 127 VAYANNGDME 136
A +G+ E
Sbjct: 302 GACRVHGNTE 311
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 317/557 (56%), Gaps = 46/557 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R+VF+++ + WT++I GY+ G ++++++ MR+ + P L ++ A
Sbjct: 137 SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 196
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T V D+ G+ IH G+ K G E V+S
Sbjct: 197 TNVEDLGQGKSIH--------------------GLVTKLGL---------EFEPDIVISL 227
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T + YA G +E A FN + + + W AM++GY N EAI+ F M +
Sbjct: 228 TTM---YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 284
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +T+ + A AQ+G ++ A W+ S + ++ V + LIDMY+KCGSI A
Sbjct: 285 VDSITMRSAVLASAQVGSLELARWLDGYISKSEYR--DDTFVNTGLIDMYAKCGSIYLAR 342
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + ++V +S MI+G+ +HG AI L+ +M + PN TFIG+LTAC + G
Sbjct: 343 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSG 402
Query: 303 L-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L +G+ P HY+C+VDLLGRAG L +A + MP++P VWGALL
Sbjct: 403 LVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALL 462
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IHR + +IAA LF L+P G+Y+ LSN+YASA +W V+ VR ++ GL K
Sbjct: 463 SACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNK 522
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+ G+S +E + G + F+ GD +HP S EI + L L RL+A GY P++ SVL+D++ E
Sbjct: 523 DLGHSSIEIN-GNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHE 581
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E + L HSE+LA+A+G+++T+PG T+RI KNLR C +CH + S+++ REI++RD
Sbjct: 582 EIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDA 641
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 642 KRFHHFKDGVCSCGDFW 658
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 34/300 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ F +V + LW A+I+GY + + I +Y M+ + P FT + KAC
Sbjct: 36 NYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC 95
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+G+QIH QT G F S+++V N+++ MY K G + +R VFD++ +R VVSW
Sbjct: 96 GGTSVEGIGKQIHGQTFKYG-FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSW 154
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I Y NGD P EA+ F+ M+ V+
Sbjct: 155 TSIISGYVQNGD-------------------------------PMEALNVFKEMRQCNVK 183
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++ LV V++A + + + + G ++V+ +L MY+K G ++ A
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVAR 241
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M++ N+ +++MI G+A +G AI+LF +M+ + + +T + A + VG
Sbjct: 242 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 14/239 (5%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ I A + GD+ A F E+ D + W A++ GY Q I + MQ + V
Sbjct: 24 KFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHP 83
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T + V+ AC V + GFG +NV V ++L+ MY+K G I A
Sbjct: 84 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG--SNVFVQNSLVSMYAKFGQISYARI 141
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-- 301
+F + R V S++S+I G+ +G A+ +F +M + KP+ + + V+TA ++V
Sbjct: 142 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 201
Query: 302 --------GLKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
GL G+ D + + + G +E A +M +PN +W A++
Sbjct: 202 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMI 259
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 314/560 (56%), Gaps = 24/560 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR----EGIGPVSFTLSALFKA 61
R F+ ++ L++AL+ H D + +RR + + P F L++L A
Sbjct: 56 RRAFDDAPRRDLHLYSALLAAV---SHSSDPELVLPLLRRMLSDDALRPDHFVLASLASA 112
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + LG+Q+HA +++D V +++I MY KCG +RKVFD + ++ V
Sbjct: 113 AGRLRSLRLGRQLHAH-FAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVV 171
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
WT LI YA+NG A LF +P WTA+++G+V+ A+ F M+ +
Sbjct: 172 WTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDI 231
Query: 182 ET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D L VI A L + + GF +++++VG+AL+DMYSKC I
Sbjct: 232 RIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGF--LSSMIVGNALVDMYSKCSDIHS 289
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F G+ R+V S++++++G A HGRA L+ M+ KPN VTF+G++ ACSH
Sbjct: 290 AREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSH 349
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + YG+ P HY C +DLL R+G L EA K++ MP EP+ WG
Sbjct: 350 AGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWG 409
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALL AC+ H + ++ A++L EL P YI+LSN+YA WD V++VR+++
Sbjct: 410 ALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEME 469
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
++K PGYSW+E R F AG++ EI L +L+ ++ GY P+ SV++D+
Sbjct: 470 IRKVPGYSWVEAGRES-RIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDL 528
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ EK++ L HSE+LA+AFG+L + PG+ +R++KNLR+C DCH M S + R+I+V
Sbjct: 529 EEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIV 588
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+DG CSC +W
Sbjct: 589 RDASRFHHFEDGNCSCSEFW 608
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+++HA+ +L G ++ Y + L +R+ FD+ P RD+ ++ L+ A ++
Sbjct: 21 RRVHAR-LLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSH 79
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ D E L + D + D+ L +
Sbjct: 80 SSDPELVLPLLRRMLSDD------------------------------ALRPDHFVLASL 109
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR 251
SA +L ++ + S + N VV S+LIDMY KCG DA ++F + +
Sbjct: 110 ASAAGRLRSLRLGRQLHAHFAASPYSADN--VVKSSLIDMYCKCGVPQDARKVFDSIGVK 167
Query: 252 NVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N ++++I G+A +G A+ LF M
Sbjct: 168 NSVVWTALISGYASNGCTGEALDLFQSM 195
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F V + FL+ +LI+ G D++ Y M I P ++T +++ KAC
Sbjct: 59 AYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKAC 118
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + +G +H+ + + G+ SD +V +I Y K +RKVFD
Sbjct: 119 ADLSLLCIGTLVHSH-VFVSGYASDSFVQAALIAFYAKSCTPRVARKVFD---------- 167
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
E+P + VAW +M++GY QN EA+E F +M+ + VE
Sbjct: 168 ---------------------EMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVE 206
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T V V+SAC+QLG + + W+ + GSG NVV+ ++L++M+S+CG + A
Sbjct: 207 PDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGI--TMNVVLATSLVNMFSRCGDVGRAR 264
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M + NV +++MI G+ MHG A+++F M PN VTF+ VL+AC+H G
Sbjct: 265 AVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAG 324
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV-EPNGGVWGA 349
L + YGV P +H+ CMVD+ GR G L EA + V+ + E VW A
Sbjct: 325 LIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTA 384
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N ++ A +L EP+ G+Y++LSN+YA AG D V VR ++ GL
Sbjct: 385 MLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGL 444
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK GYS ++ D + F GD +HP + EI L +L+ R + GY P S ++++
Sbjct: 445 KKQVGYSTIDVDNRS-YLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELE 503
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
EE++ L HSEKLA+AFGL+ T G T+RI+KNLRICEDCH + S V+ REI+VR
Sbjct: 504 GEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVR 563
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFHHF++G CSC +YW
Sbjct: 564 DKLRFHHFREGSCSCSDYW 582
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ G + LF + D + +++ + +A+ ++ RM + +
Sbjct: 46 TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIV 105
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T VI ACA L ++ V SG+ ++ V +ALI Y+K + A
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYA--SDSFVQAALIAFYAKSCTPRVAR 163
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M QR++ +++SMI G+ +G A+ A+++F M ++ +P+ TF+ VL+ACS +G
Sbjct: 164 KVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLG 223
Query: 303 ---LKCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
C+ G++ + +V++ R G + A + M +E N +W A++
Sbjct: 224 SLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSM-IEGNVVLWTAMI 282
Query: 352 GACQIH 357
+H
Sbjct: 283 SGYGMH 288
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 302/546 (55%), Gaps = 46/546 (8%)
Query: 16 NPFLWTALIRGYILQGHLK-DSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+ FL+ LIR Y K +S Y +M R G+ P FT + K C + + LG+ +
Sbjct: 88 DAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCV 147
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + G F D++V NT+I MY G G
Sbjct: 148 HGCVVKFG-FEEDVHVLNTLIHMYCCLGEDG----------------------------- 177
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E A +F++ P D V W+AM+ G+V+ A++ F MQ GV D +T+V V+SA
Sbjct: 178 FEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSA 237
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
CA LG ++ WV E +V + +ALIDM++KCG++D A ++F M R +
Sbjct: 238 CADLGALELGKWVESYVEKKNIP--KSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIV 295
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++S+I G AMHGR A+ LF +MV+ P+ V FIGVL+ACSH GL
Sbjct: 296 SWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSM 355
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
+ + + P +HY CMVDLL R G ++EA + V+KMP EPN +W ++ AC ++
Sbjct: 356 ERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKL 415
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ + L + EP NY++LSNIYA W+ ++VR ++ M G+KK PG + +E +
Sbjct: 416 GESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNN 475
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
++EF AGD +H EI + + ++ ++ GY P VL D+ +E+K+ L HSE
Sbjct: 476 E-MYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSE 534
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+AF LL T PG ++RI+KNLR+CEDCH S+V REIVVRD RFHHF++G C
Sbjct: 535 KLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLC 594
Query: 543 SCGNYW 548
SC ++W
Sbjct: 595 SCRDFW 600
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 34/281 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F VF+ + W+A+I G++ G ++ L+ M+ G+ P T+ ++ AC
Sbjct: 180 FAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACA 239
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + LG+ + + + + + N +I M+ KCG + + K+F +M R +VSWT
Sbjct: 240 DLGALELGKWVESY-VEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWT 298
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A +G A LF+E+ V+N G+
Sbjct: 299 SVIAGLAMHGRGLDAVSLFDEM---------------VEN----------------GITP 327
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V +GV+SAC+ G++ + E F + V ++D+ + G + +A+
Sbjct: 328 DDVAFIGVLSACSHSGLVDKGRYYFGSME-RNFSIVPKVEHYGCMVDLLCRGGFVKEAFE 386
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
M + N + ++I G + +++K+E
Sbjct: 387 FVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSE 427
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTE 64
R +F+Q+ F + +LIR G ++++Y M R G P SFTL+ KAC
Sbjct: 80 RNLFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAA 138
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V G+Q+HAQ L G + YV ++ +Y KC + +R VFD M
Sbjct: 139 VPAPGEGRQLHAQA-LRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA--------- 188
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
GD K+ VAW+AMV+GY + EA+ F MQ GVE D
Sbjct: 189 --------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPD 227
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT+V VISACA+ G + WV + G ++ + +ALIDMY+KCG I+ A +
Sbjct: 228 EVTMVSVISACAKAGALDLGKWVHAYIDRKGI--TVDLELSTALIDMYAKCGLIERARGV 285
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +++ ++S+MI+GFA+HG A+ LF M++ + +PN VTFIGVL+AC+H GL
Sbjct: 286 FDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLV 345
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ G+ PS ++Y CMVDLL R+G L++A V MPV PN +W LL A
Sbjct: 346 EDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVA 405
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +IA+ A L ELEP NY++LSN+YAS WD VS +RR +K +
Sbjct: 406 CKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIA 465
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G +HEF D +HP EI+ L ++ DR++ G++P +VL+DV +EEK
Sbjct: 466 GRSSIEIN-GHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEK 524
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSE+LA+A+GLL T +R++KNLR C DCH S+ REIVVRD +R
Sbjct: 525 EAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVR 584
Query: 534 FHHFQDGKCSCGNYW 548
FH F G CSC ++W
Sbjct: 585 FHKFMGGSCSCKDFW 599
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 316/555 (56%), Gaps = 54/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
+F+ + +K+ W +LI G+ H+ S++ + +M+ E + P T+ ++ AC+ L
Sbjct: 96 LFDDMPHKDLVSWNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISACSGAL 153
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D G+ IH I +GG T ++ V N++I MY K
Sbjct: 154 DA--GKYIHGFGIKVGG-TLEVKVANSLINMYGK-------------------------- 184
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+GD+ SA LF +P + V+W +++ V N RE I+YF +M+ G+E D
Sbjct: 185 -----SGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEG 239
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T++ ++ AC LGV K A + + +GFG + + +AL+D Y+K G + +Y +F
Sbjct: 240 TILALLQACLHLGVGKLAESIHGLMFCTGFGA--KITIATALLDTYAKLGRLSASYGVFT 297
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ + ++++M+ G+A HG AI+LF M +P+ VTF +L+ACSH GL
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P DHY+CMVDLLGR G L +A ++++ MP+EPN GVWGALLGAC
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N E+ + A HL +EP NYI+LSN+Y+++ W D ++VR LLK GLK+ PG
Sbjct: 418 RVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPG 477
Query: 415 YSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
YS +E G++ H F GD +HP + +I L +LL +++ GY VL DV +E K
Sbjct: 478 YSSIEYGNKN--HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVK 535
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ ++ HSEKLA+AFGLL + G + I KNLRIC DCH S + R I++RD R
Sbjct: 536 EDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKR 595
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSC +YW
Sbjct: 596 FHHFSDGFCSCADYW 610
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 17 PFLW-TALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACTEVLDVSLGQQ 73
P W ++++ + +Q + + L+ S R+ P + +SAL A +S ++
Sbjct: 2 PLRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAI-VSALLIAVNSCPSISNCRE 60
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IHA+ + D ++G+ ++ Y K G+ + K+FD+MP +D+VSW LI ++
Sbjct: 61 IHAR-VFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCL 119
Query: 134 DMESAGGLFNELPLKDKVAWTAMVT-GYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
M + TA T + + KP E VT++ +I
Sbjct: 120 HM----------------SLTAFYTMKFEMSVKPNE-----------------VTILSMI 146
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
SAC+ G + ++ G G V V ++LI+MY K G + A R+F + N
Sbjct: 147 SACS--GALDAGKYIHGF--GIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPN 202
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
S++S+I +G A I F M + + + T + +L AC H+G+
Sbjct: 203 TVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 307/553 (55%), Gaps = 61/553 (11%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ W A+I+G G K++I + M+ +G+ + ++ AC + ++ G+QI
Sbjct: 233 KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA I+ F +YVG+ +I MY KC L ++ VFD M +++VVS
Sbjct: 293 HA-CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS------------- 338
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
WTAMV GY Q + EA++ F MQ +G++ D+ TL ISA
Sbjct: 339 ------------------WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 195 CAQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
CA V + EGS F G I+ V V ++L+ +Y KCG IDD+ R+F
Sbjct: 381 CAN---------VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+ S+++M+ +A GRA IQLF MV+ KP+GVT GV++ACS GL
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YG+ PS HY+CM+DL R+G LEEA++ + MP P+ W LL AC+
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
N EI + AA L EL+P Y +LS+IYAS G WD V+++RR ++ +KK PG
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ +G +H F A D + P +I L +L +++ +GY+P+ V +DV + K +
Sbjct: 612 SWIKW-KGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LA+AFGL+ G +R+ KNLR+C DCH S V GREI+VRD +RFH
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFH 730
Query: 536 HFQDGKCSCGNYW 548
F+DG CSCG++W
Sbjct: 731 RFKDGTCSCGDFW 743
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 19/385 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
FE++ ++ W LI GY L G + ++ Y +M R+ ++ TL + K +
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
VSLG+QIH Q I LG F S L VG+ ++ MY G + ++KVF + +R+ V + L+
Sbjct: 154 HVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G +E A LF + KD V+W AM+ G QN +EAIE F M+ G++ D
Sbjct: 213 GGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
V+ AC LG I + + F +++ VGSALIDMY KC + A +F
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQ--DHIYVGSALIDMYCKCKCLHYAKTVFD 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV----- 301
MKQ+NV S+++M++G+ GRA A+++F DM ++ P+ T ++AC++V
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 302 GLKCYG--VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-C 354
G + +G ++ HY +V L G+ G ++++ ++ +M V + W A++ A
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYA 448
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKI 378
Q R E Q+ + L+PD +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGV 473
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 33/245 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + VF+++K KN WTA++ GY G ++++ ++ M+R GI P +TL AC
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V + G Q H + I G + V N+++ +Y KCG + S ++F+EM RD VSWT
Sbjct: 383 NVSSLEEGSQFHGKAI-TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ AYA G + E I+ F++M G++
Sbjct: 442 AMVSAYAQFG-------------------------------RAVETIQLFDKMVQHGLKP 470
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VTL GVISAC++ G+++ ++ S +G + ++ S +ID++S+ G +++A R
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRYFKLMT-SEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 244 IFVGM 248
GM
Sbjct: 530 FINGM 534
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 46/322 (14%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
+ ++ N ++ Y +R+VFD +P+ ++ SW L++AY+ G + F +LP
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
+D V W ++ GY + A++ Y M+ VTL+ ++ + G +
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS------- 258
+ GF + ++VGS L+ MY+ G I DA ++F G+ RN Y+S
Sbjct: 160 QIHGQVIKLGFE--SYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 259 -----------------------MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
MI G A +G A AI+ F +M K + F VL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 296 TACSHVGL--------KCYGVSPSTDHY---ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC +G C + DH + ++D+ + CL A + ++M + N
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNV 336
Query: 345 GVWGAL-LGACQIHRNPEIAQI 365
W A+ +G Q R E +I
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKI 358
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 317/557 (56%), Gaps = 46/557 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R+VF+++ + WT++I GY+ G ++++++ MR+ + P L ++ A
Sbjct: 152 SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAY 211
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T V D+ G+ IH G+ K G E V+S
Sbjct: 212 TNVEDLGQGKSIH--------------------GLVTKLGL---------EFEPDIVISL 242
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T + YA G +E A FN + + + W AM++GY N EAI+ F M +
Sbjct: 243 TTM---YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 299
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +T+ + A AQ+G ++ A W+ S + ++ V + LIDMY+KCGSI A
Sbjct: 300 VDSITMRSAVLASAQVGSLELARWLDGYISKSEYR--DDTFVNTGLIDMYAKCGSIYLAR 357
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F + ++V +S MI+G+ +HG AI L+ +M + PN TFIG+LTAC + G
Sbjct: 358 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSG 417
Query: 303 L-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L +G+ P HY+C+VDLLGRAG L +A + MP++P VWGALL
Sbjct: 418 LVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALL 477
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IHR + +IAA LF L+P G+Y+ LSN+YASA +W V+ VR ++ GL K
Sbjct: 478 SACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNK 537
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+ G+S +E + G + F+ GD +HP S EI + L L RL+A GY P++ SVL+D++ E
Sbjct: 538 DLGHSSIEIN-GNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHE 596
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
E + L HSE+LA+A+G+++T+PG T+RI KNLR C +CH + S+++ REI++RD
Sbjct: 597 EIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDA 656
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 657 KRFHHFKDGVCSCGDFW 673
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 34/300 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ F +V + LW A+I+GY + + I +Y M+ + P FT + KAC
Sbjct: 51 NYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC 110
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+G+QIH QT G F S+++V N+++ MY K G + +R VFD++ +R VVSW
Sbjct: 111 GGTSVEGIGKQIHGQTFKYG-FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSW 169
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I Y NGD P EA+ F+ M+ V+
Sbjct: 170 TSIISGYVQNGD-------------------------------PMEALNVFKEMRQCNVK 198
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++ LV V++A + + + + G ++V+ +L MY+K G ++ A
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVAR 256
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M++ N+ +++MI G+A +G AI+LF +M+ + + +T + A + VG
Sbjct: 257 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 14/239 (5%)
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ I A + GD+ A F E+ D + W A++ GY Q I + MQ + V
Sbjct: 39 KFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHP 98
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T + V+ AC V + GFG +NV V ++L+ MY+K G I A
Sbjct: 99 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG--SNVFVQNSLVSMYAKFGQISYARI 156
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-- 301
+F + R V S++S+I G+ +G A+ +F +M + KP+ + + V+TA ++V
Sbjct: 157 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 216
Query: 302 --------GLKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
GL G+ D + + + G +E A +M +PN +W A++
Sbjct: 217 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMI 274
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALFKACTE 64
R +F+Q+ F + +LIR G ++++Y M R G P SFTL+ KAC
Sbjct: 129 RNLFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAA 187
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V G+Q+HAQ L G + YV ++ +Y KC + +R VFD M
Sbjct: 188 VPAPGEGRQLHAQA-LRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA--------- 237
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
GD K+ VAW+AMV+GY + EA+ F MQ GVE D
Sbjct: 238 --------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPD 276
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT+V VISACA+ G + WV + G ++ + +ALIDMY+KCG I+ A +
Sbjct: 277 EVTMVSVISACAKAGALDLGKWVHAYIDRKGI--TVDLELSTALIDMYAKCGLIERARGV 334
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +++ ++S+MI+GFA+HG A+ LF M++ + +PN VTFIGVL+AC+H GL
Sbjct: 335 FDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLV 394
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ G+ PS ++Y CMVDLL R+G L++A V MPV PN +W LL A
Sbjct: 395 EDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVA 454
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +IA+ A L ELEP NY++LSN+YAS WD VS +RR +K +
Sbjct: 455 CKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIA 514
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S +E + G +HEF D +HP EI+ L ++ DR++ G++P +VL+DV +EEK
Sbjct: 515 GRSSIEIN-GHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEK 573
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ L HSE+LA+A+GLL T +R++KNLR C DCH S+ REIVVRD +R
Sbjct: 574 EAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVR 633
Query: 534 FHHFQDGKCSCGNYW 548
FH F G CSC ++W
Sbjct: 634 FHKFMGGSCSCKDFW 648
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 324/567 (57%), Gaps = 62/567 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
VF+ + + LW A+I GY + ++++ L+ M G+ S T++ + AC
Sbjct: 356 VFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
S + IH ++ G D +V N ++ MY + G + ++++F +M +R
Sbjct: 416 AFSKKEAIHG-FVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR--------- 465
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-------- 178
D V W ++TGYV + + +A+ +MQ
Sbjct: 466 ----------------------DLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503
Query: 179 ---AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
++ + +TL+ ++ +CA L + + A + +V VGSAL+DMY+KC
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA--TDVAVGSALVDMYAKC 561
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + + ++F + RNV +++ +++ + MHG + AI + M+ KPN VTFI V
Sbjct: 562 GCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVF 621
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE-P 342
ACSH G+ K YGV PS+DHYAC+VDLLGRAG ++EA +++ +P
Sbjct: 622 AACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFD 681
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
G W +LLGAC+IH N EI +IAA +L +LEP+ +Y++L+NIY+SAG+W + VRR
Sbjct: 682 KAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRR 741
Query: 403 LLKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
+K G++K PG SW+E GD +H+F AGD +HP S +++ L L +R++ +GY P+
Sbjct: 742 NMKAQGVRKEPGCSWIEHGDE--VHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDT 799
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
VL++V ++EK+ +L HSEKLA+AFG+L TSPG +R+ KNLR+C DCHL S+V
Sbjct: 800 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKV 859
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ REI++RD RFHHF++G CSCG+YW
Sbjct: 860 VDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 160/366 (43%), Gaps = 55/366 (15%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++ +++ M EG+ P FT+S++ AC+ + + G+++HA +
Sbjct: 266 WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G + +VG+ ++ MY C + +VFD M +R + W +I YA N E A
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEAL 385
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF E+ + AG+ + T+ GV+ AC + G
Sbjct: 386 LLFIEME------------------------------ESAGLLANSTTMAGVVPACVRSG 415
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ G + V +AL+DMYS+ G ID A RIF M+ R++ +++++
Sbjct: 416 AFSKKEAIHGFVVKRGLD--RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTI 473
Query: 260 ILGFAMHGRAHAAIQLFGDM-----------VKTETKPNGVTFIGVLTACSHVG------ 302
I G+ R A+ + M + KPN +T + +L +C+ +
Sbjct: 474 ITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGK 533
Query: 303 -LKCYGVSP--STDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ Y + +TD + +VD+ + GCL+ + K+ +++P+ N W ++ A +H
Sbjct: 534 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMH 592
Query: 358 RNPEIA 363
N + A
Sbjct: 593 GNSQDA 598
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 33/289 (11%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+P W L+R + L++++ Y M GI P +F AL KA ++ D+ LG+QIH
Sbjct: 57 SPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIH 116
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A G + V NT++ +Y KCG G KVFD + ER+ VSW LI + +
Sbjct: 117 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 176
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
E A+E F M VE TLV V AC
Sbjct: 177 EM-------------------------------ALEAFRCMLDEDVEPSSFTLVSVALAC 205
Query: 196 AQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
+ + + ++ A G G +N+ ++ + L+ MY K G + + + + R++
Sbjct: 206 SNFPMPEGLLMGKQVHAYGLRKGELNSFIINT-LVAMYGKMGKLASSKVLLGSFEGRDLV 264
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
++++++ + + A++ +MV +P+G T VL ACSH+ +
Sbjct: 265 TWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM 313
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL- 66
VF+++ +N W +LI + ++ + M E + P SFTL ++ AC+
Sbjct: 151 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPM 210
Query: 67 --DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +G+Q+HA + G S ++ NT++ MY K G L S+ + RD+
Sbjct: 211 PEGLLMGKQVHAYGLRKGELNS--FIINTLVAMYGKMGKLASSKVLLGSFEGRDL----- 263
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
V W +++ QN + EA+EY M GVE D
Sbjct: 264 --------------------------VTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ AC+ L +++ + A +G N VGSAL+DMY C + R+
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGCRV 356
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVG 302
F GM R + +++MI G+A + A+ LF +M ++ N T GV+ AC G
Sbjct: 357 FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q+ +N W ++ Y + G+ +D+I + M +G+ P T ++F AC+
Sbjct: 568 RKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHS 627
Query: 66 LDVSLGQQI 74
V+ G +I
Sbjct: 628 GMVNEGLKI 636
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 310/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
++E + ++ W A + G G ++++ M EG P +T ++ +C+ + D
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+Q+HA I+ + +V +I MY KC +L
Sbjct: 532 VHYGRQVHAH-IIKNQLDDNNFVCTALIDMYAKCMYL----------------------- 567
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A FN L ++D WT ++T Y Q + +A+ YF +MQ GV+ + T
Sbjct: 568 --------EDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L G +S C+ L ++ + + SG ++++ VGSAL+DMY+KCG +++A +F
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGH--VSDMFVGSALVDMYAKCGCMEEAEALFEA 677
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R+ +++++I G+A +G+ + A+ F M+ P+GVTF G+L+ACSH GL
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+SP+ DH ACMVD+LGR G +E ++KM + N +W +LGA +
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASK 797
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N + + AAN LFEL+P++ +YI+LSNI+A+ G WDDV RVR L+ G+KK PG
Sbjct: 798 MHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGC 857
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +H F + D +HP EI L +L L + Y P VL++V + EKK
Sbjct: 858 SWVEAN-GQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKE 916
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LAL F L++TS +RI KNLRIC DCH M S + +EIVVRD RFH
Sbjct: 917 NLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFH 976
Query: 536 HFQDGKCSCGNYW 548
HF++G CSC ++W
Sbjct: 977 HFKNGACSCNDFW 989
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 57/376 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ RLV ++ ++ WTALI+G + +G DSI L+ M+ EGI P FTL+ KAC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + LG+Q+HAQ L G DL+VG+ ++ +Y KCG + + K+F MPE++ V+W
Sbjct: 224 SLCMALDLGKQMHAQAFKL-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ YA GD VTG ++ F M V+
Sbjct: 283 NVLLNGYAQRGD----------------------VTG---------VLKLFCSMMELDVK 311
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ TL V+ CA +K + + G+ N +G L+DMYSKCG DA
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE--GNEFIGCGLVDMYSKCGLAIDAI 369
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F +K+ ++ +S++I G++ +I+LF M +T PN T +L+A ++ G
Sbjct: 370 GVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429
Query: 303 LKCYGVSPSTDHYAC---------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
YG S +AC +V + + GC+ + K+ E M V+ + W
Sbjct: 430 NLQYGQSI----HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISW 484
Query: 348 GALLGA---CQIHRNP 360
A L C ++ P
Sbjct: 485 NAYLSGLHDCGMYDRP 500
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 47/348 (13%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S++ + C + + + IH I+ D ++ +++ +Y KC + +R V +MP
Sbjct: 116 SSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+R D V+WTA++ G V ++I F+
Sbjct: 175 DR-------------------------------DVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
MQ G+ + TL + AC+ + + A+ G + ++ VGSAL+D+Y+KC
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQM--HAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G I+ A ++F+GM ++N +++ ++ G+A G ++LF M++ + K N T VL
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 296 TACSHV-GLKCYGVSPS---------TDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNG 344
C++ LK V S + C +VD+ + G +A+ + + + +P+
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDI 380
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
VW AL+ C + I HL L Y I S + A+
Sbjct: 381 VVWSALI-TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+ F ++ ++ F WT +I Y + +++ + M++EG+ P FTL+ C+ +
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ GQQ+H+ + G SD++VG+ ++ MY KCG + + +F+ + RD ++W +I
Sbjct: 632 SLEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTII 690
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
GY QN + +A+ F M G+ D V
Sbjct: 691 C-------------------------------GYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T G++SAC+ G+++ + FG V + ++D+ + G D+
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFN-SMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778
Query: 247 GMK-QRNVFSYSSMILGFAMHGR----AHAAIQLF 276
M+ +N + +++ MH AA +LF
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKAANKLF 813
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 310/563 (55%), Gaps = 53/563 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGY---ILQGHLKDSISLYCSMRREGIGPVSFTLSALF 59
++ RL+ N + + L+R + L ++SL+ SM P +FT L
Sbjct: 46 NYARLLLSTNPTLNSYYYNTLLRAFSQTPLPTPPFHALSLFLSMPSP---PDNFTFPFLL 102
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
K C+ LG+Q+HA LG F DLY+ N ++ MY + G L +R +FD MP RDV
Sbjct: 103 KCCSRSKLPPLGKQLHALLTKLG-FAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDV 161
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSW T+M+ G V + P EAI FERM
Sbjct: 162 VSW-------------------------------TSMIGGLVNHDLPVEAINLFERMLQC 190
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
GVE + T++ V+ ACA G + V E G + V +AL+DMY+K G I
Sbjct: 191 GVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGCIA 250
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A ++F + R+VF +++MI G A HG AI +F DM + KP+ T VLTAC
Sbjct: 251 SARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTACR 310
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+ GL + YG+ PS H+ C+VDLL RAG L+EA V MP+EP+ +W
Sbjct: 311 NAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDTVLW 370
Query: 348 GALLGACQIHRNPEIAQIAANHL--FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
L+ AC++H + + A+ HL ++ D G+YI+ SN+YAS G W + + VR L+
Sbjct: 371 RTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKAEVRELMN 430
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
GL K PG S +E D GV HEF GD HP + EI L +++D+++ +GY P + VL
Sbjct: 431 KKGLVKPPGTSRIEVDGGV-HEFVMGDYNHPEAEEIFVELAEVVDKIRKEGYDPRVSEVL 489
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ DEEK L+ HSEKLALA+GL+ G+T+RI+KNLR CEDCH FM S++ R+
Sbjct: 490 LEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEFMKLISKIYKRD 549
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD +RFHHF++G+CSC +YW
Sbjct: 550 IIVRDRIRFHHFKNGECSCKDYW 572
>gi|296089328|emb|CBI39100.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 306/541 (56%), Gaps = 80/541 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ N F++ A+IRG+ + + Y +R+G+ P + T L K+CT++
Sbjct: 23 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 82
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S+G Q H I+ GF D+YV N+++ M GF C
Sbjct: 83 ISMGSQAHGH-IIKHGFEKDVYVQNSLVHM----GFNKC--------------------- 116
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
GD+ESA LF+++P K+ V W+ M++GY QN +A+E F+ +Q GV +
Sbjct: 117 -----GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETV 171
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V I G N+++G+AL+DMY++CGSID A +F
Sbjct: 172 MV--------------------IKNGMTL----NLILGTALVDMYARCGSIDKAVWVFED 207
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ +R+ S++++I G AMHG + +++ F MV+ P +TF VL+ACSH GL
Sbjct: 208 LPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGL---- 263
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
LEEA + V KMPV+PN VWGALLGAC+IH+N EI +
Sbjct: 264 --------------------LEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVG 303
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L +L P G Y++LSNIYA+A W+ V+ +R+++K GLKK PG+S +E D G +H+
Sbjct: 304 KILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELD-GRVHK 362
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F GD +HP +I++ ++L R++A GY+ N L+D+ +EEK+ L HSEKLA+A
Sbjct: 363 FTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIA 422
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FG++ + G +RI+KNLR+CEDCH S+V GRE++VRD RFHHF+ G CSC +Y
Sbjct: 423 FGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDY 482
Query: 548 W 548
W
Sbjct: 483 W 483
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q+ KN W+ +I GY H ++ L+ ++ +G+ +A V
Sbjct: 123 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGV-----------RANETV 171
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ ++ G T +L +G ++ MY +CG + + VF+++PERD +SWT L
Sbjct: 172 M------------VIKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTAL 219
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G E +++YF M AG+
Sbjct: 220 IAGLAMHGYSE-------------------------------RSLKYFATMVEAGLTPRD 248
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+T V+SAC+ G+++ A P+ ++G+ I ++ G
Sbjct: 249 ITFTAVLSACSHGGLLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIG 299
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 315/555 (56%), Gaps = 54/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
+F+ + +K+ W +LI G+ H+ S++ + +M+ E + P T+ ++ AC L
Sbjct: 96 LFDDMPHKDLVSWNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISACNGAL 153
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D G+ IH I +GG T ++ V N++I MY K
Sbjct: 154 DA--GKYIHGFGIKVGG-TLEVKVANSLINMYGK-------------------------- 184
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+GD+ SA LF +P + V+W +++ V N RE I+YF +M+ G+E D
Sbjct: 185 -----SGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEG 239
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T++ ++ AC LGV K A + + +GFG + + +AL+D Y+K G + +Y +F
Sbjct: 240 TILALLQACLHLGVGKLAESIHGLMFCTGFGA--KITIATALLDTYAKLGRLSASYGVFT 297
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ + ++++M+ G+A HG AI+LF M +P+ VTF +L+ACSH GL
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P DHY+CMVDLLGR G L +A ++++ MP+EPN GVWGALLGAC
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H N E+ + A HL +EP NYI+LSN+Y+++ W D ++VR LLK GLK+ PG
Sbjct: 418 RVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPG 477
Query: 415 YSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
YS +E G++ H F GD +HP + +I L +LL +++ GY VL DV +E K
Sbjct: 478 YSSIEYGNKN--HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVK 535
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ ++ HSEKLA+AFGLL + G + I KNLRIC DCH S + R I++RD R
Sbjct: 536 EDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKR 595
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSC +YW
Sbjct: 596 FHHFSDGFCSCADYW 610
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+VF + RD +L+ Y G E A LF+++P KD V+W ++++G+ +
Sbjct: 64 RVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCL--HM 121
Query: 169 AIEYFERMQYA-GVETDYVTLVGVISAC-AQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
++ F M++ V+ + VT++ +ISAC L KY + G G V V +
Sbjct: 122 SLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGF-----GIKVGGTLEVKVAN 176
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
+LI+MY K G + A R+F + N S++S+I +G A I F M + +
Sbjct: 177 SLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQ 236
Query: 287 NGVTFIGVLTACSHVGL 303
+ T + +L AC H+G+
Sbjct: 237 DEGTILALLQACLHLGV 253
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 318/595 (53%), Gaps = 69/595 (11%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA-----CTEVLDVSLGQQI 74
+T+L+RGY+ G L D+I L+ M + L A ++ D + +
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDV 174
Query: 75 HAQTILLGGF-----------------TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
A+T +L G+ ++ MI Y + G + +RK+F+ MP+R
Sbjct: 175 VARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR 234
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELP------------------------------- 146
+ VSWT ++V Y G +E A LFN +P
Sbjct: 235 NEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMC 294
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
+D W+AM+ Y QN EA+ F M G+ +Y + + +++ CA L Y
Sbjct: 295 ARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+ F +V SALI MY KCG++D A R+F + ++V ++SMI G+A H
Sbjct: 355 LHAAMLRCSFD--TDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQH 412
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------LKCYGVSPS----TDH 314
G A+ +F D+ P+G+T+IGVLTACS+ G G++ S H
Sbjct: 413 GLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAH 472
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y+CMVDLLGRAG ++EAL ++ MPVEP+ +WGAL+GAC++H+N EIA++AA L ELE
Sbjct: 473 YSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELE 532
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGD-L 433
P G Y++LS+IY S G W+D S +R+ + L K+PG SW+E ++ ++H F +GD L
Sbjct: 533 PGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNK-MVHLFTSGDVL 591
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTT 493
+HP I L +L L GY + VL+DV +E+K + L HSE+ A+A+GLL
Sbjct: 592 SHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKV 651
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +R+MKNLR+C DCH + +++ REI++RD RFHHF+DG CSC +YW
Sbjct: 652 PAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 36/327 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDS-ISLYCSMRREGIGP-------VSFTLSA 57
R F+ + + + ALI GY + HL D+ + L+ M +G +S
Sbjct: 37 RAAFDAMPLRTTASYNALIAGY-FRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHT 95
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT-----------------MIGMYVK 100
L A + + L + + T LL G+ + + ++G ++
Sbjct: 96 LPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLD 155
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
G + +RK+FDEMP++DVV+ T ++ Y G + A LF+E+P ++ V+WTAM++GY
Sbjct: 156 AGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
QN K A + FE M + LVG I Q G ++ A + N
Sbjct: 216 AQNGKVILARKLFEVMPDRNEVSWTAMLVGYI----QAGHVEDAEDLFNAMPDHPVAACN 271
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
++VG + + G +D A +F M R+ ++S+MI + + A+ F +M+
Sbjct: 272 AMMVG------FGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREML 325
Query: 281 KTETKPNGVTFIGVLTACSHVGLKCYG 307
+PN +FI +LT C+ + YG
Sbjct: 326 CRGIRPNYTSFISILTVCAALATADYG 352
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD- 149
N I V+ G + +R FD MP R S+ LI Y N ++A GLF+ +P +D
Sbjct: 20 ANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDL 79
Query: 150 --------------------------------KVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V++T+++ GYV++ +AI F +M
Sbjct: 80 GSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMP 139
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
E ++VT ++ G + A + + P +VV +A++ Y + G
Sbjct: 140 ----ERNHVTYTVLLGGFLDAGRVNEARKLFDEM------PDKDVVARTAMLSGYCQAGR 189
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I +A +F M +RNV S+++MI G+A +G+ A +LF M +G + A
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQA 249
Query: 298 CSHV--GLKCYGVSPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
HV + P AC M+ G+ G ++ A M E+M + G W A++
Sbjct: 250 -GHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCAR-DDGTWSAMI 305
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 47/262 (17%)
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VV+ I G++E A F+ +PL+ ++ A++ GY +N P A+ F RM
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG-SALIDMYSKCGS 237
+ + Y L+ G+ + + + A P+ VV ++L+ Y + G
Sbjct: 77 RDLGS-YNALIA--------GLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGL 127
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ DA R+F M +RN +Y+ ++ GF GR + A +LF +M
Sbjct: 128 LADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM------------------ 169
Query: 298 CSHVGLKCYGVSPSTDHYACMVDLLG--RAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
P D A L G +AG + EA + ++MP + N W A++
Sbjct: 170 ------------PDKDVVARTAMLSGYCQAGRITEARALFDEMP-KRNVVSWTAMISGYA 216
Query: 356 IHRNPEIAQIAANHLFELEPDK 377
+N ++ I A LFE+ PD+
Sbjct: 217 --QNGKV--ILARKLFEVMPDR 234
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 313/562 (55%), Gaps = 59/562 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A I + G +++I + RR P S T A AC++
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L ++LG Q+H +L GF +D+ V N +I Y KC
Sbjct: 223 LHLNLGMQLHG-LVLRSGFDTDVSVCNGLIDFYGKCK----------------------- 258
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ S+ +F E+ K+ V+W ++V YVQN + +A + R + VET
Sbjct: 259 --------QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 186 VTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ V+SACA +LG +A+ V E + F VGSAL+DMY KCG I+D
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF-------VGSALVDMYGKCGCIED 363
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE--TKPNGVTFIGVLTAC 298
+ + F M ++N+ + +S+I G+A G+ A+ LF +M PN +TF+ +L+AC
Sbjct: 364 SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 423
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S G YG+ P +HY+C+VD+LGRAG +E A + ++KMP++P V
Sbjct: 424 SRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGAL AC++H P++ +AA +LF+L+P GN+++LSN +A+AG W + + VR LK
Sbjct: 484 WGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKG 543
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK GYSW+ + +H F+A D +H + EIQ L L + ++A GY+P+L+ LY
Sbjct: 544 VGIKKGAGYSWITV-KNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY 602
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ +EEK + HSEKLALAFGLL+ +RI KNLRIC DCH F S + REI
Sbjct: 603 DLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREI 662
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRDN RFH F+DG CSC +YW
Sbjct: 663 IVRDNNRFHRFKDGICSCKDYW 684
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 154/358 (43%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLV +N WT+LI G GH ++ + MRREG+ P FT FKA +
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+QIHA + G D++VG + MY K +RK+FDE+PER++ +
Sbjct: 122 RLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET---- 176
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W A ++ V + +PREAIE F + +
Sbjct: 177 ---------------------------WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T ++AC+ + + + SGF +V V + LID Y KC I + IF
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD--TDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +N S+ S++ + + A L+ K + + VL+AC+ +
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 303 ----LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + V + + +VD+ G+ GC+E++ + ++MP E N +L+G
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 384
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 146/352 (41%), Gaps = 48/352 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L L K + LG+ +HA+ + ++ N +I MY K +R V
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
P R+VVS WT++++G QN A+ F
Sbjct: 68 TPARNVVS-------------------------------WTSLISGLAQNGHFSTALVEF 96
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M+ GV + T A A L + + +A G I +V VG + DMY
Sbjct: 97 FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG--RILDVFVGCSAFDMYC 154
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K DDA ++F + +RN+ ++++ I GR AI+ F + + + PN +TF
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCA 214
Query: 294 VLTACS-----HVGLKCYGV----SPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEP 342
L ACS ++G++ +G+ TD C ++D G+ + + + +M +
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK- 273
Query: 343 NGGVWGALLGA-CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
N W +L+ A Q H + + + + ++ + +++I S + A AGM
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV--ETSDFMISSVLSACAGM 323
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/563 (36%), Positives = 324/563 (57%), Gaps = 57/563 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ + VF ++ K W ALI GY + S+ + M+ G+ P +FT+ +L AC
Sbjct: 431 SYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSAC 490
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG+++H I+ DL+V +++ +Y+ CG L + +FD M + +VS
Sbjct: 491 SKLKSLRLGKEVHG-FIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVS- 548
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
W ++TG++QN P A+ F +M G++
Sbjct: 549 ------------------------------WNTVITGHLQNGFPERALGLFRQMVLYGIQ 578
Query: 183 TDYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++++ V AC+ +LG +A + + E + F + ++IDMY+K G+
Sbjct: 579 PCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAF-------IACSIIDMYAKNGA 631
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I + ++F G+K+++ S+++MI+G+ MHGRA AI+LF +M +T P+ +TF+GVLTA
Sbjct: 632 ITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTA 691
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+H GL +G+ P+ HYAC++D+LGRAG L+ AL++ +M EP+ G
Sbjct: 692 CNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVG 751
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W +LL C+IH+N E+ + A LF LEP+K NY++LSN+YA G WDDV +VR+ +K
Sbjct: 752 IWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMK 811
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
L+K+ G SW+E + G + F G+ EI+ L ++ GY+P+ SV
Sbjct: 812 EMSLRKDAGCSWIELN-GKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQ 870
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+D+S+EEK L HSEKLA+ +GL+ TS G T+R+ KNLRIC DCH S+V+ RE
Sbjct: 871 HDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMERE 930
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRDN RFHHF G CSCG+YW
Sbjct: 931 IVVRDNKRFHHFNKGFCSCGDYW 953
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 162/376 (43%), Gaps = 69/376 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R F+ ++ KN F W A+I Y + + ++ M + + P +FT + KAC
Sbjct: 140 RSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAG 199
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV +G +H ++ G DL+VGN ++ Y GF+ + K+FD MPER++VSW
Sbjct: 200 ISDVGIGLAVHG-LVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNS 258
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I +++NGD G F +P D
Sbjct: 259 MIRVFSDNGD----DGAF--MP-------------------------------------D 275
Query: 185 YVTLVGVISACA---QLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
T+V V+ CA ++GV K + W +++ +VV +AL+DMYSK G I D
Sbjct: 276 VATVVTVLPVCAREREIGVGKGVHGWAVKLSLD------KELVVNNALMDMYSKWGCIID 329
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTAC 298
+ IF +NV S+++M+ GF+ G H L M+ + K + VT + + C
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Query: 299 -------SHVGLKCYGVSPSTDHYACMVDLL----GRAGCLEEALKMVEKMPVEPNGGVW 347
S L CY + + + + + G L A ++ + + W
Sbjct: 390 FDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNS-W 448
Query: 348 GALLGACQIHRNPEIA 363
AL+G +P ++
Sbjct: 449 NALIGGYAQSSDPRLS 464
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 156/369 (42%), Gaps = 56/369 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACT 63
+++F+ KN W ++ G+ +G + + L M E + T+ C
Sbjct: 331 QMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCF 390
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + +++H + L F D + N + Y KCG L +++VF + + + S
Sbjct: 391 DESVLPSLKELHCYS-LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNS-- 447
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
W A++ GY Q++ PR +++ +M+ +G+
Sbjct: 448 -----------------------------WNALIGGYAQSSDPRLSLDAHLQMKNSGLLP 478
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSID 239
D T+ ++SAC++L ++ E GF N ++ V +++ +Y CG +
Sbjct: 479 DNFTVCSLLSACSKLKSLRLGK------EVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 532
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+F M+ ++ S++++I G +G A+ LF MV +P G++ + V ACS
Sbjct: 533 TVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS 592
Query: 300 -----HVGLKCYGVS-----PSTDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+G + + + AC ++D+ + G + ++ K+ + E + W
Sbjct: 593 LLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLK-EKSAASWN 651
Query: 349 ALLGACQIH 357
A++ +H
Sbjct: 652 AMIMGYGMH 660
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 126/311 (40%), Gaps = 58/311 (18%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L L +A + D+ +G++IH SD + +I MY CG SR FD
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+ +++ W A+++ Y +N E +E F
Sbjct: 146 LRSKNLFQW-------------------------------NAVISSYSRNELYHEVLEMF 174
Query: 174 ERM-QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
+M + D T VI ACA + + V + +G + ++ VG+AL+ Y
Sbjct: 175 IKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGL--VEDLFVGNALVSFY 232
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
G + DA ++F M +RN+ S++SMI F+ +G A + P+ T +
Sbjct: 233 GTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFM------------PDVATVV 280
Query: 293 GVLTACSH-------VGLKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVE 341
VL C+ G+ + V S D ++D+ + GC+ ++ +M+ K+
Sbjct: 281 TVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDS-QMIFKLNNN 339
Query: 342 PNGGVWGALLG 352
N W ++G
Sbjct: 340 KNVVSWNTMVG 350
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 311/548 (56%), Gaps = 53/548 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+PF ++R I G + ++L RR + P + T L +AC +L + G+ +H
Sbjct: 771 DPFPLNTVLR--IAAGSPRPRVALELHRRRLAL-PDTHTYPPLIQACARLLALREGECLH 827
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A+ GF + ++V N+++ +Y CG
Sbjct: 828 AEAAK-NGFVTLVFVQNSLVHLYGACGLF------------------------------- 855
Query: 136 ESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
ESA +F+E+P++ + V+W +M+ + N +P E + F M D T+V V++
Sbjct: 856 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 915
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ-RN 252
ACA+ G + V E G + N V +ALID+Y+KCGS++DA RIF M R
Sbjct: 916 ACAEFGALALGRRVHVYVEKVGL--VENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 973
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--------- 303
V S++S+I+G A +G A++LF M + + P +T +GVL ACSH GL
Sbjct: 974 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 1033
Query: 304 ---KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
+ YG+SP +H CMVDLLGRAG +EEA + MP+EPN VW LLG+C +H+
Sbjct: 1034 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 1093
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ ++A L EL+P G+Y++LSN+YA+ GMW DV +R+ + ++KNPG+S +E
Sbjct: 1094 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 1153
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
R ++EF GD +HP S +I + L ++ +RL+ +GY P +VL D+ +EEK+ L H
Sbjct: 1154 -RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYH 1212
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SE+LA+AF LL + PG +RI+KNLR+C DCH+ S+V REI+VRD RFHHFQ G
Sbjct: 1213 SERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGG 1272
Query: 541 KCSCGNYW 548
CSC +YW
Sbjct: 1273 ACSCKDYW 1280
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 39/266 (14%)
Query: 8 VFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF++ V+ +N W +++ + G + ++++ M P FT+ ++ AC E
Sbjct: 861 VFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEF 920
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-PERDVVSWTE 124
++LG+++H + G + +V N +I +Y KCG + +R++F+EM R VVSWT
Sbjct: 921 GALALGRRVHVYVEKV-GLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTS 979
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIV A NG F +EA+E F M+ +
Sbjct: 980 LIVGLAANG--------FG-----------------------KEALELFSLMEREKLVPT 1008
Query: 185 YVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T+VGV+ AC+ G++ + + E G P + ++D+ + G +++AY
Sbjct: 1009 EITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISP--RIEHLGCMVDLLGRAGRVEEAYD 1066
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGR 268
+ M + N + +++ AMH +
Sbjct: 1067 YIITMPLEPNAVVWRTLLGSCAMHKK 1092
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 324/559 (57%), Gaps = 40/559 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHL--KDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF+++ +++ W +++ + Q +L K G+ P F SAL KAC +
Sbjct: 128 VFDEMPHRDHIAWASVLTA-LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 186
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H I+ + +D V ++++ MY KCG L ++ VFD + ++ +SWT +
Sbjct: 187 GSIDHGRQVHCHFIV-SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 245
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-D 184
+ YA +G E A LF LP+K+ +WTA+++G+VQ+ K EA F M+ V+ D
Sbjct: 246 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 305
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L ++ ACA L A +G V G+ALIDMY+KC + A I
Sbjct: 306 PLVLSSIVGACANLA-----------ASIAG-----RQVHGNALIDMYAKCSDVIAAKDI 349
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ R+V S++S+I+G A HG+A A+ L+ DMV KPN VTF+G++ ACSHVG
Sbjct: 350 FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFV 409
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K YG+ PS HY C++DLLGR+G L+EA ++ MP P+ W ALL
Sbjct: 410 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 469
Query: 353 ACQIHRNPEIAQIAANHL---FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
AC+ ++ A+HL F+L+ YI+LSNIYASA +W VS RR L +
Sbjct: 470 ACKRQGRGQMGIRIADHLVSSFKLKDP--STYILLSNIYASASLWGKVSEARRKLGEMEV 527
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDV 468
+K+PG+S +E R F AG+ +HP +I + L L + ++ +GY P+ +L+D+
Sbjct: 528 RKDPGHSSVEV-RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDM 586
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
++EK+++L HSE+ A+A+GLL PG +RI+KNLR+C DCH+ + S++ REI+V
Sbjct: 587 DEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIV 646
Query: 529 RDNMRFHHFQDGKCSCGNY 547
RD R+HHF+ GKCSC ++
Sbjct: 647 RDATRYHHFKGGKCSCNDF 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V F + F L + + +HA + LG + NT++ +Y KCG + +V
Sbjct: 72 VFFDFGSYFSRMNRTL--TTAKALHAHIVKLG-IVQCCPLANTLVNVYGKCGAASHALQV 128
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FDEMP RD ++W ++ A N+ L K G +P
Sbjct: 129 FDEMPHRDHIAWASVLTA-------------LNQANLSGKTLSVFSSVGSSSGLRP---- 171
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CE--IAEGSGFGPINNVVVGSA 227
D ++ ACA LG I + V C ++E + N+ VV S+
Sbjct: 172 -------------DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA-----NDEVVKSS 213
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
L+DMY+KCG ++ A +F ++ +N S+++M+ G+A GR A++LF
Sbjct: 214 LVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 262
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 131/320 (40%), Gaps = 80/320 (25%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSI---------------------------- 37
+ VF+ ++ KN WTA++ GY G ++++
Sbjct: 228 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 287
Query: 38 ---SLYCSMRREGIGPVS-FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
S++ MRRE + + LS++ AC + G+Q+H GN
Sbjct: 288 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH---------------GNA 332
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
+I MY KC + ++ +F M RDVVSWT LIV A +G E A L+++
Sbjct: 333 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDD--------- 383
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
M GV+ + VT VG+I AC+ +G ++ + + +
Sbjct: 384 ----------------------MVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ-SMT 420
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
+G ++ + L+D+ + G +D+A + M + ++++++ GR
Sbjct: 421 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 480
Query: 273 IQLFGDMVKTETKPNGVTFI 292
I++ +V + + T+I
Sbjct: 481 IRIADHLVSSFKLKDPSTYI 500
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 313/562 (55%), Gaps = 59/562 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A I + G +++I + RR P S T A AC++
Sbjct: 113 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 172
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L ++LG Q+H +L GF +D+ V N +I Y KC
Sbjct: 173 LHLNLGMQLHG-LVLRSGFDTDVSVCNGLIDFYGKCK----------------------- 208
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ S+ +F E+ K+ V+W ++V YVQN + +A + R + VET
Sbjct: 209 --------QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 260
Query: 186 VTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ V+SACA +LG +A+ V E + F VGSAL+DMY KCG I+D
Sbjct: 261 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF-------VGSALVDMYGKCGCIED 313
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE--TKPNGVTFIGVLTAC 298
+ + F M ++N+ + +S+I G+A G+ A+ LF +M PN +TF+ +L+AC
Sbjct: 314 SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 373
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S G YG+ P +HY+C+VD+LGRAG +E A + ++KMP++P V
Sbjct: 374 SRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 433
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGAL AC++H P++ +AA +LF+L+P GN+++LSN +A+AG W + + VR LK
Sbjct: 434 WGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKG 493
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK GYSW+ + +H F+A D +H + EIQ L L + ++A GY+P+L+ LY
Sbjct: 494 VGIKKGAGYSWITV-KNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY 552
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ +EEK + HSEKLALAFGLL+ +RI KNLRIC DCH F S + REI
Sbjct: 553 DLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREI 612
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRDN RFH F+DG CSC +YW
Sbjct: 613 IVRDNNRFHRFKDGICSCKDYW 634
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 154/358 (43%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLV +N WT+LI G GH ++ + MRREG+ P FT FKA +
Sbjct: 12 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 71
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+QIHA + G D++VG + MY K +RK+FDE+PER++ +
Sbjct: 72 RLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET---- 126
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W A ++ V + +PREAIE F + +
Sbjct: 127 ---------------------------WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 159
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T ++AC+ + + + SGF +V V + LID Y KC I + IF
Sbjct: 160 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD--TDVSVCNGLIDFYGKCKQIRSSEIIF 217
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +N S+ S++ + + A L+ K + + VL+AC+ +
Sbjct: 218 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 277
Query: 303 ----LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + V + + +VD+ G+ GC+E++ + ++MP E N +L+G
Sbjct: 278 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 334
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 17/277 (6%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y+ ESA + P ++ V+WT++++G QN A+ F M+ GV + T
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
A A L + + +A G I +V VG + DMY K DDA ++F +
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCG--RILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGL 303
+RN+ ++++ I GR AI+ F + + + PN +TF L ACS ++G+
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 304 KCYGV----SPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-CQI 356
+ +G+ TD C ++D G+ + + + +M + N W +L+ A Q
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQN 238
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
H + + + + ++ + +++I S + A AGM
Sbjct: 239 HEDEKASVLYLRSRKDIV--ETSDFMISSVLSACAGM 273
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 304/541 (56%), Gaps = 47/541 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GY ++ L+ M ++G FTL+ +FK C + ++ G+Q+HA I
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G+ DL+V + ++ MYVKCG DM +A
Sbjct: 545 K-SGYDLDLWVSSGILDMYVKCG-------------------------------DMSAAQ 572
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
F+ +P+ D VAWT M++G ++N + A F +M+ GV D T+ + A + L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
++ + A N+ VG++L+DMY+KCGSIDDAY +F ++ N+ ++++M
Sbjct: 633 ALEQGRQIH--ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YG 307
++G A HG +QLF M KP+ VTFIGVL+ACSH GL YG
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HY+C+ D LGRAG +++A ++E M +E + ++ LL AC++ + E + A
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
L ELEP Y++LSN+YA+A WD++ R ++K +KK+PG+SW+E + IH
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEV-KNKIHI 869
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F D ++ + I + + D++ ++ +GY P L DV +EEK+R L HSEKLA+A
Sbjct: 870 FVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVA 929
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGLL+T P +R++KNLR+C DCH M ++V REIV+RD RFH F+DG CSCG+Y
Sbjct: 930 FGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDY 989
Query: 548 W 548
W
Sbjct: 990 W 990
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 166/396 (41%), Gaps = 50/396 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F R VF+ + ++ W ++I G G +++ L+ + R G+ P +T++++ KA +
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 64 EVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +SL +Q+H I + SD +V
Sbjct: 428 SLPEGLSLSKQVHVHAIKINN-VSDSFVS------------------------------- 455
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T LI AY+ N M+ A LF D VAW AM+ GY Q+ + ++ F M G
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+D TL V C L I V A SG+ ++ V S ++DMY KCG + A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQ 572
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
F + + ++++MI G +G A +F M P+ T + A S
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 300 ------HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ ++ + D + +VD+ + G +++A + +++ + N W A+L
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAML 691
Query: 352 -GACQIHRNPEIAQIAAN-HLFELEPDKIGNYIILS 385
G Q E Q+ ++PDK+ +LS
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 45/282 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S + F+ + + WT +I G I G + + ++ MR G+ P FT++ L KA
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + G+QIHA + L T+D +VG +++ MY KCG + + +F + ++ +W
Sbjct: 629 SCLTALEQGRQIHANALKLNC-TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++V G Q+ + +E ++ F++M+ G++
Sbjct: 688 NAMLV-------------------------------GLAQHGEGKETLQLFKQMKSLGIK 716
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D VT +GV+SAC+ G++ A G +G + S L D + G + A
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD-YGIKPEIEHYSCLADALGRAGLVKQA- 774
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
N+ SM +M+ AA ++ GD TET
Sbjct: 775 --------ENLIESMSMEASASMYRTLLAACRVQGD---TET 805
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 133/350 (38%), Gaps = 68/350 (19%)
Query: 27 YILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS 86
Y+ G + + M + T + +V ++LGQQ+H + LG
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG-LDL 348
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
L V N++I MY K G +R VFD M ERD++S
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS------------------------- 383
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
W +++ G QN EA+ F ++ G++ D T+ V+ A + L
Sbjct: 384 ------WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL-------- 429
Query: 207 VCEIAEGSGFG--------PINNV---VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
EG INNV V +ALID YS+ + +A I ++ +
Sbjct: 430 ----PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVA 484
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYGV 308
+++M+ G+ H ++LF M K + + T V C + + Y +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 309 SPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
D + ++D+ + G + A + +PV P+ W ++ C
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ LG+ HA+ IL + ++ N +I MY KCG L +R+VFD+MP+RD+VSW ++
Sbjct: 54 DLMLGKCTHAR-ILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AYA + + V+N + +A F ++ V T +
Sbjct: 113 AAYAQSSEC------------------------VVENIQ--QAFLLFRILRQDVVYTSRM 146
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSG--FGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL ++ C G + W E G G + V AL+++Y K G + + +
Sbjct: 147 TLSPMLKLCLHSGYV----WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
F M R+V ++ M+ + G AI L + PN +T
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 115/306 (37%), Gaps = 75/306 (24%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQG-----HLKDSISLYCSMRREGIGPVSFTLSA 57
++ R VF+++ ++ W +++ Y +++ + L+ +R++ + TLS
Sbjct: 91 TYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSP 150
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ K C V + H +G D +V ++ +Y+K F ++ E
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIG-LDGDEFVAGALVNIYLK----------FGKVKEG 199
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V LF E+P +D V W M+ Y++ EAI+
Sbjct: 200 KV---------------------LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 178 YAGVETDYVT--LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+G+ + +T L+ IS G A V A G+ ++ ++ + + Y
Sbjct: 239 SSGLNPNEITLRLLARIS-----GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G YS++ ++ F DMV+++ + + VTFI +L
Sbjct: 294 G------------------QYSAL-------------LKCFADMVESDVECDQVTFILML 322
Query: 296 TACSHV 301
V
Sbjct: 323 ATAVKV 328
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/624 (33%), Positives = 344/624 (55%), Gaps = 85/624 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F L F++ KN LWTA++ GY G ++ + M +G+ +T + AC+
Sbjct: 220 FKGLEFDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACS 276
Query: 64 EVLDVSLGQQ-------------IHAQTILLGGFTS-----------------DLYVGNT 93
VL G+Q ++ Q+ L+ + D+ N+
Sbjct: 277 SVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNS 336
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDV---------------------------------- 119
++ +V+ G + ++F M R++
Sbjct: 337 LMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFE 396
Query: 120 ---VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+ L+ YA GDM+ A +F ++ KD ++WT++VTGY QN E+++ F M
Sbjct: 397 NYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDM 456
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ GV D + ++SACA+L ++++ V SG +V ++L+ MY+KCG
Sbjct: 457 RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVY--NSLVAMYAKCG 514
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+DDA IFV M+ ++V +++++I+G+A +G+ +++ + MV + T+P+ +TFIG+L
Sbjct: 515 CLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLF 574
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACSH GL K YG+ P +HYACM+DL GR+G L+EA +++++M V+P+
Sbjct: 575 ACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDA 634
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
VW +LL AC++H N E+A+ AA +LFELEP Y++LSN+Y+++ W+DV+++R+L+
Sbjct: 635 TVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLM 694
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
K G+ K PG SWLE + V + F + D HP EI + +++ R++ GY P++
Sbjct: 695 KSKGIVKEPGCSWLEINSRV-NTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFS 753
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
L+D+ E K+ L HSEKLA+AFGLL P A +RI KNLR+C DCH M S+V R
Sbjct: 754 LHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTR 813
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
I++RD+ FHHF++G+CSCG+YW
Sbjct: 814 HIILRDSNCFHHFREGECSCGDYW 837
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 195/435 (44%), Gaps = 88/435 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISL------------------YC------ 41
R +F+++ K+ + W +I Y+ G L ++ L YC
Sbjct: 85 RKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKV 144
Query: 42 -------SMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTM 94
SMR EG FTL ++ + C+ + + G+ IH ++ GF +++V +
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHG-FVVKNGFEGNVFVVTGL 203
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ MY KC VS E + GL E K+ V WT
Sbjct: 204 VDMYAKC----------------KCVSEAEFLFK-----------GL--EFDRKNHVLWT 234
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
AMVTGY QN +A+E+F M GVE + T +++AC+ + + V S
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
GFG +NV V SAL+DMY+KCG + +A + M+ +V S++S+++GF HG A++
Sbjct: 295 GFG--SNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDH--------------YACMVD 320
LF +M K + TF VL C VG ++P + H +VD
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCV-VG----SINPKSVHGLIIKTGFENYKLVSNALVD 407
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HLFELEPDKI 378
+ + G ++ A + EKM +E + W +L+ G Q + + E +I + + + PD+
Sbjct: 408 MYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ- 465
Query: 379 GNYIILSNIYASAGM 393
+I+ S + A A +
Sbjct: 466 --FIVASILSACAEL 478
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 19/293 (6%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+ IH T +Y N ++ K G + +RK+FD+MP++D SW +I +Y N
Sbjct: 52 RSIHTTT---AASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVN 108
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
G + A LF+ K + W+++++GY + EA + F M+ G + TL V
Sbjct: 109 VGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSV 168
Query: 192 ISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-- 249
+ C+ LG+I+ + +GF NV V + L+DMY+KC + +A +F G++
Sbjct: 169 LRVCSSLGLIQTGEMIHGFVVKNGFE--GNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD 226
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY--- 306
++N +++M+ G+A +G + A++ F M + N TF +LTACS V +C+
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQ 286
Query: 307 --------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + + +VD+ + G L+ A M+E M + + W +L+
Sbjct: 287 VHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 314/559 (56%), Gaps = 52/559 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +F+ + + + F + +IR + S+SL+ M G+ P FT + KAC
Sbjct: 39 SYARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKAC 97
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G +H+ LG F SD+YV N +I Y CGFL + KVF+
Sbjct: 98 ARL---QTGLDLHSLLFKLG-FDSDVYVQNGLIHFYGCCGFLDFALKVFE---------- 143
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-V 181
E+P +D V+W++M+ + +N EA+ F+RMQ G V
Sbjct: 144 ---------------------EMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTV 182
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D V ++ V+SA + LG ++ W+ +G V +G+AL+DM+S+CG I+++
Sbjct: 183 KPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE--FTVSLGTALVDMFSRCGCIEES 240
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F M +RNV +++++I G A+HGR+ A+++F +M +P+ VTF GVL ACSH
Sbjct: 241 MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300
Query: 302 GLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YG+ P +HY CMVDLLGRAG L EA K V+ MP+ PN +W
Sbjct: 301 GLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRT 360
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC H E+A+ + EL+ G+Y++LSN+Y G W + + VR ++ +
Sbjct: 361 LLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRI 420
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG S + + +IHEF AGD HP I++ L ++D L+ GY P++ +VL+D+
Sbjct: 421 SKKPGCSLINVNH-LIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIE 479
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEKLA+AF LL T+R+MKNLRIC DCH FM AS V REI++R
Sbjct: 480 EEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIR 539
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF G CSC +YW
Sbjct: 540 DRNRFHHFSKGSCSCRDYW 558
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 314/558 (56%), Gaps = 50/558 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQG--HLKDSISLYCSMRREG-IGPVSFTLSALFKAC 62
R VF+ ++ N WTAL+ GY+ G + ++++ ++ +M +G + P FT S + KAC
Sbjct: 317 RKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D G+Q+H QTI LG D VGN ++ +Y K
Sbjct: 377 ASLPDFDFGEQVHGQTIKLGLSAIDC-VGNGLVSVYAK---------------------- 413
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+G MESA F+ L K+ V+ T + V++ + ++Y G
Sbjct: 414 ---------SGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSG 464
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T ++S A +G I + + GF ++ V +ALI MYSKCG+ + A
Sbjct: 465 VSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRT--DLSVNNALISMYSKCGNKEAAL 522
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M+ NV +++S+I GFA HG A A++LF +M++T KPN VT+I VL+ACSHVG
Sbjct: 523 QVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVG 582
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +G+ P +HYACMVDLLGR+G L EA++ + MP + + VW
Sbjct: 583 LIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTF 642
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG+C++HRN ++ + AA + E EP YI+LSN+YA+ G W+DV+ +R+ +K +
Sbjct: 643 LGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQIT 702
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G SW+E + V H+F GD HP + +I + L +L +++ GY PN VL+DV D
Sbjct: 703 KEAGSSWIEVENQV-HKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVED 761
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K++ L HSEKLA+AF L++T +R+ KNLR+C DCH + S V GREIVVRD
Sbjct: 762 EQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRD 821
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFHH +DG CSC +YW
Sbjct: 822 ANRFHHMKDGTCSCNDYW 839
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 165/396 (41%), Gaps = 79/396 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPVSFTLSALFKACTE 64
R VF++++ KN WT +I G+ ++I L+ M G P FTL+ L C E
Sbjct: 215 RKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAE 274
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ +SLG+++H+ ++ G DL VG +++ MY KCG + +RKVFD M E +V+SWT
Sbjct: 275 IQFLSLGKELHSW-VIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVET 183
L+ Y G GY REA+ F M GV
Sbjct: 334 LVNGYVRGGG------------------------GY-----EREAMRMFSNMLLQGGVAP 364
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T GV+ ACA L + V G I+ VG+ L+ +Y+K G ++ A +
Sbjct: 365 NCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAID--CVGNGLVSVYAKSGRMESARK 422
Query: 244 IFVGMKQRNV-----------------------------------FSYSSMILGFAMHGR 268
F + ++N+ F+Y+S++ G A G
Sbjct: 423 CFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGT 482
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC-------MVDL 321
Q+ +VK + + +++ S G K + D C +++
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIING 542
Query: 322 LGRAGCLEEALKMVEKM---PVEPNGGVWGALLGAC 354
+ G +AL++ M V+PN + A+L AC
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSAC 578
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 34/259 (13%)
Query: 45 REGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL 104
++G+ P + +A+ +AC + G + + G F S + VG +I M+VK
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVK---- 204
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
GCS D+ESA +F+++ K+ V WT M+T Q
Sbjct: 205 GCSL------------------------ADLESARKVFDKMREKNVVTWTLMITRLAQYG 240
Query: 165 KPREAIEYF-ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV 223
EAI+ F E + +G D TL G+IS CA++ + + SG + ++
Sbjct: 241 YNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL--VLDLC 298
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH--AAIQLFGDM-V 280
VG +L+DMY+KCG + +A ++F GM++ NV S+++++ G+ G + A+++F +M +
Sbjct: 299 VGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLL 358
Query: 281 KTETKPNGVTFIGVLTACS 299
+ PN TF GVL AC+
Sbjct: 359 QGGVAPNCFTFSGVLKACA 377
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/546 (36%), Positives = 304/546 (55%), Gaps = 46/546 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ WT LI GY D++ + M R G P FTLS++ KA
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Q+H + G F S+++VG+ ++ +Y + G
Sbjct: 175 RRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL---------------------- 211
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ A +F+ L ++ V+W A++ G+ + + +A+E F+ M G +
Sbjct: 212 ---------MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + AC+ G ++ WV SG + G+ L+DMY+K GSI DA +IF
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIF 320
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R+V S++S++ +A HG A+ F +M + +PN ++F+ VLTACSH GL
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 380
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K G+ P HY +VDLLGRAG L AL+ +E+MP+EP +W ALL AC
Sbjct: 381 EGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA H+FEL+PD G ++IL NIYAS G W+D +RVR+ +K +G+KK P
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + IH F A D HP EI + ++L +++ GY P+ V+ V +E++
Sbjct: 501 CSWVEIE-NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQERE 559
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+ALAF LL T PG+T+ I KN+R+C DCH + AS+V+GREI+VRD RF
Sbjct: 560 VNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRF 619
Query: 535 HHFQDG 540
HHF+D
Sbjct: 620 HHFKDA 625
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 54/317 (17%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ L K CT + G+ +HA IL F D+ +GNT++ MY KCG
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMYAKCG------------- 109
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+E A +F ++P +D V WT +++GY Q+ +P +A+ +F +
Sbjct: 110 ------------------SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDM 231
M G + TL VI A A C + GF G +NV VGSAL+D+
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAA------ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y++ G +DDA +F ++ RN S++++I G A A++LF M++ +P+ ++
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 292 IGVLTACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPV 340
+ ACS G + Y + A ++D+ ++G + +A K+ +++
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-A 324
Query: 341 EPNGGVWGALLGACQIH 357
+ + W +LL A H
Sbjct: 325 KRDVVSWNSLLTAYAQH 341
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 317/557 (56%), Gaps = 48/557 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+++ N WTA+I GY+ G +++I L+ M + + P FT S++ KAC
Sbjct: 202 ARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACA 261
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D+ LG+Q++A + + S VGN++I MY +CG
Sbjct: 262 NLSDIWLGEQVYALVVKMR-LASINCVGNSLISMYSRCG--------------------- 299
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ME+A F+ L K+ V++ +V Y ++ EA E F ++ AG
Sbjct: 300 ----------NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGV 349
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T ++S + +G I + SGF +N+ + +ALI MYS+CG+I+ A++
Sbjct: 350 NAFTFASLLSGASSIGAIGKGEQIHSRILKSGFK--SNLHICNALISMYSRCGNIEAAFQ 407
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M NV S++SMI GFA HG A A++ F M++ PN VT+I VL+ACSHVGL
Sbjct: 408 VFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467
Query: 304 KC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G+ P +HYAC+VDLLGR+G LEEA+++V MP + + V L
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFL 527
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H N ++ + AA + E +P YI+LSN++ASAG W++V+ +R+ +K L K
Sbjct: 528 GACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTK 587
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+E + V H+F GD +HP + EI L L +++ GY P+ VL+DV +E
Sbjct: 588 EAGCSWIEVENKV-HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEE 646
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K++ L HSEK+A+A+G ++TS +R+ KNLR+C DCH S V +EIV+RD
Sbjct: 647 QKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDA 706
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 707 NRFHHFKDGTCSCNDYW 723
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 148/286 (51%), Gaps = 36/286 (12%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W+ALI Y ++IS + M G P + + +F+AC+ ++SLG+ I +
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
G F SD+ VG +I M+VK NGD+ESA
Sbjct: 70 KTGYFESDVCVGCALIDMFVK------------------------------GNGDLESAY 99
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+ +P ++ V WT M+T + Q R+A++ F M +G D TL GV+SACA++G
Sbjct: 100 KVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMG 159
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDDAYRIFVGMKQRNVFSY 256
++ + SG +V VG +L+DMY+KC GS+DDA ++F M NV S+
Sbjct: 160 LLSLGRQFHCLVMKSGLDL--DVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSW 217
Query: 257 SSMILGFAMHGRA-HAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+++I G+ G AI+LF +MV+ + KPN TF VL AC+++
Sbjct: 218 TAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANL 263
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 149/299 (49%), Gaps = 38/299 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WT +I + G +D++ L+ M G P FTLS + AC E+
Sbjct: 101 VFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL 160
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC---GFLGCSRKVFDEMPERDVVSWTE 124
+SLG+Q H ++ G D+ VG +++ MY KC G + +RKVFD MP +V+SW
Sbjct: 161 LSLGRQFHC-LVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSW-- 217
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK-PREAIEYFERMQYAGVET 183
TA++TGYVQ+ REAIE F M V+
Sbjct: 218 -----------------------------TAIITGYVQSGGCDREAIELFLEMVQGQVKP 248
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
++ T V+ ACA L I V + IN VG++LI MYS+CG++++A +
Sbjct: 249 NHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASIN--CVGNSLISMYSRCGNMENARK 306
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F + ++N+ SY++++ +A + A +LF ++ T N TF +L+ S +G
Sbjct: 307 AFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIG 365
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
+D V+W+A+++ Y N K EAI F M G + GV AC+ I +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 208 CEIAEGSGFGPINNVVVGSALIDMYSK-CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+G+ ++V VG ALIDM+ K G ++ AY++F M RNV +++ MI F
Sbjct: 65 FGFLLKTGYFE-SDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------KCYGVSPSTDHYAC-- 317
G + A+ LF DMV + P+ T GV++AC+ +GL C + D C
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 318 --MVDLLGRA---GCLEEALKMVEKMPVEPNGGVWGALL 351
+VD+ + G +++A K+ ++MPV N W A++
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAII 221
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-----VGLK 304
+R++ S+S++I +A + +A AI F DM++ PN F GV ACS+ +G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 305 CYGVSPSTDHY-------ACMVDLLGRA-GCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+G T ++ ++D+ + G LE A K+ ++MP + N W ++ Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMITRFQ 121
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/568 (37%), Positives = 319/568 (56%), Gaps = 57/568 (10%)
Query: 2 DSFPRLVFEQV-----KYK---NPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVS 52
DS R FE + KY+ N ++IR Y+ L HL +S+ ++ M + I P S
Sbjct: 31 DSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHL-NSLYIFALMHKFSILPDS 89
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
T A+ KA ++ D +G+ IH I +G F D+Y ++ +Y C
Sbjct: 90 STFPAVLKATAQLCDTGVGKMIHGIVIQMG-FICDVYTSTALVHLYCTCL---------- 138
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ A LF+E+P ++ V W A++TGY N K +AI+
Sbjct: 139 ---------------------SISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M G + T+V V+SAC+ LG W+ E + NV VG+ALIDMY
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRL--NVFVGTALIDMY 235
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG++ + ++F ++++NV++++ +I G+AM+G+ AA+Q F M+ KP+ VTF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL AC H GL + +G+ P +HY CMVDLLGRAG LEEAL++++ M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ +W ALL AC++H N ++ + L ELEP+ NY++LSNIY+ W +V ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R ++ + G++K PG S +E + V++EF A + P I + L +L+ +L+ +GY
Sbjct: 416 RGMMSLRGIRKVPGCSSIEIN-NVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTG 474
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
LYD+ EEK+ +M HSEKLALAFGLL + T+RI+KNLRIC DCH F S
Sbjct: 475 TDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSL 534
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V R IVVRD RFHHF +G CSC +YW
Sbjct: 535 VYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/568 (37%), Positives = 319/568 (56%), Gaps = 57/568 (10%)
Query: 2 DSFPRLVFEQV-----KYK---NPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVS 52
DS R FE + KY+ N ++IR Y+ L HL +S+ ++ M + I P S
Sbjct: 31 DSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLDLNKHL-NSLYIFALMHKFSILPDS 89
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
T A+ KA ++ D +G+ IH I +G F D+Y ++ +Y C
Sbjct: 90 STFPAVLKATAQLCDTGVGKMIHGIVIQMG-FICDVYTSTALVHLYCTCL---------- 138
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ A LF+E+P ++ V W A++TGY N K +AI+
Sbjct: 139 ---------------------SISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M G + T+V V+SAC+ LG W+ E + NV VG+ALIDMY
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRL--NVFVGTALIDMY 235
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG++ + ++F ++++NV++++ +I G+AM+G+ AA+Q F M+ KP+ VTF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL AC H GL + +G+ P +HY CMVDLLGRAG LEEAL++++ M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ +W ALL AC++H N ++ + L ELEP+ NY++LSNIY+ W +V ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R ++ + G++K PG S +E + V++EF A + P I + L +L+ +L+ +GY
Sbjct: 416 RGMMNLRGIRKVPGCSSIEIN-NVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTG 474
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
LYD+ EEK+ +M HSEKLALAFGLL + T+RI+KNLRIC DCH F S
Sbjct: 475 TDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSL 534
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V R IVVRD RFHHF +G CSC +YW
Sbjct: 535 VYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 313/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++K K+ WTA+I GY ++++L+ M+ +GI + ++ AC +
Sbjct: 530 IFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQA 589
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ GQQIHAQ + G++ DL VGN ++ +Y +CG KV D
Sbjct: 590 LNQGQQIHAQACV-SGYSDDLSVGNALVSLYARCG------KVRD--------------- 627
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A F+++ KD ++W ++++G+ Q+ EA+ F +M AG E + T
Sbjct: 628 ----------AYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFT 677
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+SA A + +K + + +G + V + LI +Y+KCG+IDDA R F
Sbjct: 678 FGPAVSAAANVANVKLGKQIHAMIIKTGHD--SETEVSNVLITLYAKCGNIDDAERQFFE 735
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M ++N S+++M+ G++ HG A+ LF DM + PN VTF+GVL+ACSHVGL
Sbjct: 736 MPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEG 795
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+ P +HYAC+VDLLGR+G L A + VE+MP++P+ V LL AC
Sbjct: 796 IKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACI 855
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N +I + AA+HL ELEP Y++LSN+YA G W R R+++K G+KK PG
Sbjct: 856 VHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGR 915
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + V H F AGD HPN +I + L DL + +GY P S+L D +K
Sbjct: 916 SWIEVNNSV-HAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGP 974
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+ HSEKLA+AFGLL+ S + + KNLR+C DCH ++ S++ R IVVRD+ RFH
Sbjct: 975 TQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFH 1034
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC +YW
Sbjct: 1035 HFKGGICSCKDYW 1047
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 166/360 (46%), Gaps = 46/360 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + +N LW ++ Y L +L +S ++ M+ EGI P FT ++ + C+ + V
Sbjct: 430 FLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV 489
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+QIH Q +L GF ++YV + +I MY K G
Sbjct: 490 DLGEQIHTQ-VLKTGFQFNVYVSSVLIDMYAKLG-------------------------- 522
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
++ A +F L KD V+WTAM+ GY Q+ K EA+ F+ MQ G+ +D +
Sbjct: 523 -----KLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
ISACA + + + A SG+ +++ VG+AL+ +Y++CG + DAY F +
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYS--DDLSVGNALVSLYARCGKVRDAYFAFDKI 635
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF-----------IGVLTA 297
++ S++S+I GFA G A+ LF M K + N TF L
Sbjct: 636 FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGK 695
Query: 298 CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
H + G T+ ++ L + G +++A + +MP E N W A+L H
Sbjct: 696 QIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAMLTGYSQH 754
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 167/364 (45%), Gaps = 46/364 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ ++ ++ W A++ G G ++++ L+C M G+ P + S++ ACT+V
Sbjct: 225 KKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+Q+H +L GF+ + YV N ++ +Y + G + +VF+ M +RD VS+ L
Sbjct: 285 EFYKVGEQLHG-LVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSL 343
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +G Q +A+E F++M ++ D
Sbjct: 344 I-------------------------------SGLSQQGYSDKALELFKKMCLDCLKPDC 372
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+ ++SAC+ +G + A +G +++++ AL+D+Y KC I A+ F
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMS--SDIILEGALLDLYVKCSDIKTAHEFF 430
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+ + NV ++ M++ + + + + ++F M +PN T+ +L CS
Sbjct: 431 LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVD 490
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G + + ++D+ + G L+ ALK+ ++ E + W A++
Sbjct: 491 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGY 549
Query: 355 QIHR 358
H
Sbjct: 550 AQHE 553
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 50/357 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + ++ + +LI G QG+ ++ L+ M + + P T+++L AC+ V
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+Q H+ I G +SD+ + ++ +YVKC + + + F +VV W ++V
Sbjct: 388 LLVGKQFHSYAIK-AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY GL + L E+ + F +MQ G+E + T
Sbjct: 447 AY----------GLLDNL---------------------NESFKIFTQMQMEGIEPNQFT 475
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ C+ L + + +GF NV V S LIDMY+K G +D A +IF
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQ--FNVYVSSVLIDMYAKLGKLDHALKIFRR 533
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+K+++V S+++MI G+A H + A+ LF +M + + F ++AC+ G++
Sbjct: 534 LKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACA--GIQALN 591
Query: 308 VSPSTDHYAC-------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
AC +V L R G + +A +K+ + N W +L+
Sbjct: 592 QGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNIS-WNSLI 647
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 187/447 (41%), Gaps = 85/447 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + W ++ ++ + L+ M +E + P T + + + C D
Sbjct: 125 VFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGG-D 183
Query: 68 VSLG--QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V ++IHA+TI G+ + L+V N +I +Y K GFL
Sbjct: 184 VPFHCVEKIHARTIT-HGYENSLFVCNPLIDLYFKNGFLN-------------------- 222
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
SA +F+ L +D V+W AM++G Q+ EA+ F +M +GV
Sbjct: 223 -----------SAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTP 271
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+SAC ++ K + + GF V +AL+ +YS+ G+ A ++F
Sbjct: 272 YIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL--ETYVCNALVTLYSRLGNFIPAEQVF 329
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M QR+ SY+S+I G + G + A++LF M KP+ VT +L+ACS VG
Sbjct: 330 NAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALL 389
Query: 303 ----------------------------LKC--------YGVSPSTDH---YACMVDLLG 323
+KC + +S T++ + M+ G
Sbjct: 390 VGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYG 449
Query: 324 RAGCLEEALKMVEKMP---VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
L E+ K+ +M +EPN + ++L C R ++ + + + +
Sbjct: 450 LLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK-TGFQFNV 508
Query: 381 YI--ILSNIYASAGMWDDVSRVRRLLK 405
Y+ +L ++YA G D ++ R LK
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLK 535
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 12/232 (5%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+VV L+ Y GD++ A +F+E+P++ W ++ +V + F RM
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
V+ D T GV+ C G + + A G N++ V + LID+Y K G
Sbjct: 162 QEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGF 220
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++ A ++F G+++R+ S+ +M+ G + G A+ LF M + P F VL+A
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280
Query: 298 CS-----HVGLKCYGV----SPSTDHYAC--MVDLLGRAGCLEEALKMVEKM 338
C+ VG + +G+ S + Y C +V L R G A ++ M
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 320/559 (57%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +FE + + ++ ++ RGY + + SL+ + +GI P ++T +L KAC
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+Q+H ++ LG ++YV T+I MY +C + +R VFD + E VV
Sbjct: 140 AVAKALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVV-- 196
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ AM+TGY + +P EA+ F MQ ++
Sbjct: 197 -----------------------------CYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +TL+ V+S+CA LG + W+ + A+ F V V +ALIDM++KCGS+DDA
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAV 285
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M+ ++ ++S+MI+ +A HG+A ++ +F M +P+ +TF+G+L ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 303 ------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ +G+ PS HY MVDLL AG LE+A + ++K+P+ P +W L
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC H N ++A+ + +FEL+ G+Y+ILSN+YA W+ V +R+++K
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVS 469
K PG S +E + V+HEF +GD +T++ +AL +++ L+ GY P+ V++ +++
Sbjct: 466 KVPGCSSIEVN-NVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+EK+ L HSEKLA+ FGLL T PG T+R++KNLR+C DCH S + GR++V R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXR 584
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSCG++W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 120 VSWTELIVAYANNGDMES----AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
VS+ ++ + ES A LF + D V + +M GY + P E F
Sbjct: 60 VSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE 119
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ G+ D T ++ ACA ++ + ++ G +NV V LI+MY++C
Sbjct: 120 ILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD--DNVYVCPTLINMYTEC 177
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+D A +F + + V Y++MI G+A R + A+ LF +M KPN +T + VL
Sbjct: 178 EDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 296 TACSHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
++C+ +G + Y S Y ++D+ + G L++A+ + EKM + +
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DT 296
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLF--ELEPDKI 378
W A++ A H E + + + ++PD+I
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 311/548 (56%), Gaps = 53/548 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+PF ++R I G + ++L RR + P + T L +AC +L + G+ +H
Sbjct: 83 DPFPLNTVLR--IAAGSPRPRVALELHRRRLAL-PDTHTYPPLIQACARLLALREGECLH 139
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
A+ GF + ++V N+++ +Y CG
Sbjct: 140 AEAAK-NGFVTLVFVQNSLVHLYGACGLF------------------------------- 167
Query: 136 ESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
ESA +F+E+P++ + V+W +M+ + N +P E + F M D T+V V++
Sbjct: 168 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 227
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ-RN 252
ACA+ G + V E G + N V +ALID+Y+KCGS++DA RIF M R
Sbjct: 228 ACAEFGALALGRRVHVYVEKVGL--VENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 285
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--------- 303
V S++S+I+G A +G A++LF M + + P +T +GVL ACSH GL
Sbjct: 286 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 345
Query: 304 ---KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
+ YG+SP +H CMVDLLGRAG +EEA + MP+EPN VW LLG+C +H+
Sbjct: 346 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 405
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ ++A L EL+P G+Y++LSN+YA+ GMW DV +R+ + ++KNPG+S +E
Sbjct: 406 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 465
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
R ++EF GD +HP S +I + L ++ +RL+ +GY P +VL D+ +EEK+ L H
Sbjct: 466 -RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYH 524
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SE+LA+AF LL + PG +RI+KNLR+C DCH+ S+V REI+VRD RFHHFQ G
Sbjct: 525 SERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGG 584
Query: 541 KCSCGNYW 548
CSC +YW
Sbjct: 585 ACSCKDYW 592
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 39/266 (14%)
Query: 8 VFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
VF++ V+ +N W +++ + G + ++++ M P FT+ ++ AC E
Sbjct: 173 VFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEF 232
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
++LG+++H + G + +V N +I +Y KCG + +R++F+EM R VVSWT
Sbjct: 233 GALALGRRVHVYVEKV-GLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTS 291
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIV A NG F +EA+E F M+ +
Sbjct: 292 LIVGLAANG--------FG-----------------------KEALELFSLMEREKLVPT 320
Query: 185 YVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T+VGV+ AC+ G++ + + E G P + ++D+ + G +++AY
Sbjct: 321 EITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISP--RIEHLGCMVDLLGRAGRVEEAYD 378
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGR 268
+ M + N + +++ AMH +
Sbjct: 379 YIITMPLEPNAVVWRTLLGSCAMHKK 404
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 315/561 (56%), Gaps = 73/561 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ + +F ++ +N + W ++I GY G ++++ L+ M+ GI P F+LS++ +C
Sbjct: 330 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 389
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ D G+++H I+ + + ++ MY KCG + + KV+D+ ++D
Sbjct: 390 VSLSDSQKGRELH-NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKD---- 444
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ W +++ GY +E+ +F M + +E
Sbjct: 445 -------------------------RNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 479
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +T+V ++ N +V+ +AL+DMYSKCG+I A
Sbjct: 480 YDVLTMVTIV---------------------------NLLVLETALVDMYSKCGAITKAR 512
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M +N+ S+++MI G++ HG + A+ L+ +M K PN VTF+ +L+ACSH G
Sbjct: 513 TVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTG 572
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L + Y + +HY CMVDLLGRAG LE+A + VEKMP+EP WGAL
Sbjct: 573 LVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGAL 632
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H++ ++ ++AA LFEL+P G Y+I+SNIYA+AG W +V +R+++KM G+K
Sbjct: 633 LGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVK 692
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E + I F AG THP + EI L L + + GY P+ +L +V D
Sbjct: 693 KDPGVSWIEIN-SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKD 751
Query: 471 ---EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
EE++ L+ HSE+LAL+ GL++ +T+R+ KNLRIC DCH S++ GR I+
Sbjct: 752 IKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRII 811
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++GKCSCG+YW
Sbjct: 812 ARDTNRFHHFENGKCSCGDYW 832
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 178/389 (45%), Gaps = 54/389 (13%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +FE++ +N W +I Y ++ ++ M + G+ P +FT ++ + C
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCG 186
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ G+Q+H++ I G F D +VGN +I MY KC
Sbjct: 187 ALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCD--------------------- 224
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA--GV 181
D ES +F+E+ +++V W ++++ Q +A+ F RMQ + G+
Sbjct: 225 ----------DEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGI 274
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T +++ CA + N +I A N++V + L+ MYS+CG ++
Sbjct: 275 QPDQFTFTTLLTLCANQ---RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNY 331
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A IF M +RN +S++SMI G+ +G A++LF M KP+ + +L++C
Sbjct: 332 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 391
Query: 301 VG-------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEK-MPVEPNGGVWG 348
+ L + V + + +VD+ + G ++ A K+ ++ + + N +W
Sbjct: 392 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWN 451
Query: 349 ALLGACQIHRNPEIAQIAANHLFE-LEPD 376
++L + N + + + NH E LE D
Sbjct: 452 SILAG---YANKGLKKESFNHFLEMLESD 477
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 47/321 (14%)
Query: 48 IGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCS 107
+ P+ + S+L + C + G+ IH Q I G+ D Y+ ++ +Y + G L
Sbjct: 69 VNPLPY--SSLIQDCIDSNSFQRGKSIHTQMIS-NGYNPDAYLMTKILMLYARSGCLD-- 123
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
D+ A LF E+P ++ AW M+ Y +
Sbjct: 124 --------------------------DLCYARKLFEEMPERNLTAWNTMILAYARVDDYM 157
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSA 227
EA F+RM GV D T + C L V GF + VG+A
Sbjct: 158 EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK--GDTFVGNA 215
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE--TK 285
LIDMY+KC + ++F M +RN +++S+I A G + A+ LF M ++E +
Sbjct: 216 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQ 275
Query: 286 PNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
P+ TF +LT C+ H L ++ + +V + G L A ++
Sbjct: 276 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEI 335
Query: 335 VEKMPVEPNGGVWGALLGACQ 355
+M E N W +++ Q
Sbjct: 336 FNRM-AERNAYSWNSMIEGYQ 355
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 311/562 (55%), Gaps = 40/562 (7%)
Query: 6 RLVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKAC 62
R VF+ V + L W A+I GY G ++++ L+ M E G P T+S + AC
Sbjct: 338 RRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC 397
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +H ++ G + +V N ++ MY + G + +R++F + RDVVSW
Sbjct: 398 ARSEGFAGKEAMHGY-VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSW 456
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVT--GYVQNAKPREAIEYFERMQYAG 180
LI G A L E+ L ++ T G P
Sbjct: 457 NTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMP-------------- 502
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ +TL+ ++ CA L + A +++ VGSAL+DMY+KCG +
Sbjct: 503 ---NNITLMTLLPGCAALAAPARGKEIHGYAVRHALE--SDIAVGSALVDMYAKCGCLAA 557
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACS 299
+ +F + +RNV +++ +I+ + MHG A+ LF +M E PN VTFI L ACS
Sbjct: 558 SRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACS 617
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM-PVEPNGGV 346
H GL + +GV P+ D +AC+VD+LGRAG L+EA ++ M P E
Sbjct: 618 HSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSA 677
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W +LLGAC++HRN E+ ++AA LFELEP + +Y++L NIY++AGMWD VR ++
Sbjct: 678 WSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRR 737
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+ K PG SW+E D G IH F AG+ +HP S E+ + L +R++ +GY P+ VL+
Sbjct: 738 QGVAKEPGCSWIELD-GAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLH 796
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV ++EK +L HSEKLA+AFGLL PGA +R+ KNLR+C DCH S+++GR+I
Sbjct: 797 DVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDI 856
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
V+RD RFHHF+DG CSCG+YW
Sbjct: 857 VLRDVRRFHHFRDGSCSCGDYW 878
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 68/370 (18%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +I + G +++ + M G+ P T ++ AC+ + ++LG+++HA +
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
++ +V + ++ MY + +R+VFD +PE
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPE----------------------- 346
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVISACAQ- 197
P + W AM+ GY Q EA+E F RM+ AG T+ GV+ ACA+
Sbjct: 347 ------PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS 400
Query: 198 ---LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
G +V + G N V +AL+DMY++ G +D A RIF + R+V
Sbjct: 401 EGFAGKEAMHGYVVK------RGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVV 454
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDM----------VKTET------KPNGVTFIGVLTAC 298
S++++I G + G A A QL +M TE PN +T + +L C
Sbjct: 455 SWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGC 514
Query: 299 SHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+ + + Y V + + + +VD+ + GCL + + +++P N W
Sbjct: 515 AALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP-RRNVITW 573
Query: 348 GALLGACQIH 357
L+ A +H
Sbjct: 574 NVLIMAYGMH 583
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 125/323 (38%), Gaps = 77/323 (23%)
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV-ETDYVTLVGVISACA--------Q 197
L+D V++ ++++ + A++ M G + TLV V+ AC+ +
Sbjct: 130 LRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRR 189
Query: 198 LGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR---- 251
LG +A + + EG P N AL+ MY++ G +DDA +F
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFN------ALLSMYARLGLVDDAQSLFRTTAAAFSPG 243
Query: 252 --NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-- 307
+V ++++MI GR A+++ DMV +P+GVTF L ACS + + G
Sbjct: 244 GGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGRE 303
Query: 308 -----------------VSPSTDHYA--------------------------CMVDLLGR 324
S D YA M+ +
Sbjct: 304 MHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQ 363
Query: 325 AGCLEEALKMVEKMPVE----PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGN 380
AG EEAL++ +M E P+ +L AC R+ A A H + ++ GN
Sbjct: 364 AGMDEEALELFSRMEAEAGCAPSETTMSGVLPACA--RSEGFAGKEAMHGYVVKRGMAGN 421
Query: 381 YII---LSNIYASAGMWDDVSRV 400
+ L ++YA G D R+
Sbjct: 422 RFVQNALMDMYARLGEMDVARRI 444
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/579 (39%), Positives = 336/579 (58%), Gaps = 44/579 (7%)
Query: 1 MDSFPRLVFEQV--KYKNPFLWTALIRGYILQGHLK--DSISLYCSMRREGIGPVSFTLS 56
+ S R +F+++ +K+ +TALIR H +S+ L+ MR+ + +
Sbjct: 72 LPSHARKLFDEIPQSHKDSVDYTALIR------HCPPFESLKLFIQMRQFDLPLDGVVMV 125
Query: 57 ALFKACTEVL--DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
AC + D +G Q+H + G D V N ++ +YVK G +G +RK+F+ +
Sbjct: 126 CALNACARLGGGDTKVGSQMHVGVVKFGFVKFD-KVCNALMNVYVKFGLVGEARKMFEGI 184
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
R VVSW+ + +ES LF+E+P +++VAWT M+ GYV N +EA +
Sbjct: 185 EVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLK 244
Query: 175 RMQYA-GVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSG--FGPINNVVVGSALID 230
M + G +VTL V+SAC+Q G + WV C + G FG V+VG++L+D
Sbjct: 245 EMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFG----VMVGTSLVD 300
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY+KCG I+ A +F M +RNV ++++M+ G AMHG A+ +F MV+ E KP+GVT
Sbjct: 301 MYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVT 359
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+ +L+ACSH GL Y + P +HYACMV LLGRAG LEEA MV+ M
Sbjct: 360 FMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNM 419
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
+ PN V G+L+G+C H ++ + L E++P +I+LSN+YA +G + +
Sbjct: 420 RIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKAN 479
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
+R++LK G+KK PG S + D G +H+F AGD +H ++EI L +++ RL++ GY
Sbjct: 480 SLRQVLKKRGIKKVPGMSSIYVD-GKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYV 538
Query: 459 PNLR-SVLYDVSD--------EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICE 509
PN VL+ S+ EE +++L THSEKLAL FGL++T G+ + I KNLRIC+
Sbjct: 539 PNTSCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRICQ 598
Query: 510 DCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
DCH + AS+V REIVVRD RFH F+ G CSC +YW
Sbjct: 599 DCHSAIKIASKVYKREIVVRDRYRFHSFKHGSCSCSDYW 637
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 163/377 (43%), Gaps = 84/377 (22%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+L + C+ + GQQ+HA I+ G +S + ++ N ++ +Y C +RK+FDE+P
Sbjct: 25 SLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIP 84
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+ KD V +TA+ +++ P E+++ F +
Sbjct: 85 QSH-----------------------------KDSVDYTAL----IRHCPPFESLKLFIQ 111
Query: 176 MQYAGVETDYVTLVGVISACAQL--GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M+ + D V +V ++ACA+L G K + + GF + V +AL+++Y
Sbjct: 112 MRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVC--NALMNVYV 169
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSS-------------------------------MILG 262
K G + +A ++F G++ R+V S+S MI+G
Sbjct: 170 KFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVG 229
Query: 263 FAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDH 314
+ +G A L +MV + + VT VL+ACS G + CY V
Sbjct: 230 YVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLD 289
Query: 315 YACM-----VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA-QIAAN 368
+ M VD+ + G + AL + M ++ N W A+LG +H +IA + +
Sbjct: 290 FGVMVGTSLVDMYAKCGRINAALSVFRSM-LKRNVVAWNAMLGGLAMHGMGKIAVDMFPS 348
Query: 369 HLFELEPDKIGNYIILS 385
+ E++PD + +LS
Sbjct: 349 MVEEVKPDGVTFMALLS 365
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 309/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL FE V + LW+ +I Y + + L+ M R + P F+LS++ +AC +
Sbjct: 687 RLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANM 746
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+QIH I +G S+L+VGN +I +Y KC
Sbjct: 747 PLLDLGKQIHNHAIKIG-HESELFVGNALIDLYAKCS----------------------- 782
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DMES+ +F+ L ++V+W ++ GY ++ A+ F M+ A V +
Sbjct: 783 --------DMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQ 834
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V+ ACA I + V + E S F ++ +V ++LID Y+KCG I DA IF
Sbjct: 835 VTYSSVLRACASTASINHVGQVHCLIEKSTFN--SDTIVSNSLIDSYAKCGCIRDAREIF 892
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+K+ ++ S++++I G+A+HG+A A +LF M K K N +TF+ +L+ C GL
Sbjct: 893 ETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVS 952
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G+ PS +HY C+V LLGRAG L +AL + +P P+ VW ALL +
Sbjct: 953 QGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSS 1012
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H+N E+ + +A + E+EP Y++LSN+Y++AG D V+ R+ ++ G++K P
Sbjct: 1013 CIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEP 1072
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G +H F G HP I L L + +GY P+ VL+D+ +E+K
Sbjct: 1073 GLSWVE-IKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQK 1131
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
R+L HSE+LALA+GL+ T PG +RIMKNLR C DCH S+++ +EI+VRD R
Sbjct: 1132 VRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINR 1191
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 1192 FHHFEEGTCSCGDYW 1206
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ WTA++ Y ++++ ++ MR F L+++ +A +
Sbjct: 586 RRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCL 645
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V LG+ IHA ++ + ++ +V ++ MY KCG + +R F EM D
Sbjct: 646 SSVVLGKGIHACSVKTL-YDTERHVYGALLDMYAKCGNIEDARLAF-EMVTND------- 696
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D + W+ M++ Y Q + +A E F RM + V +
Sbjct: 697 -----------------------DVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+L V+ ACA + ++ + A G + + VG+ALID+Y+KC ++ + IF
Sbjct: 734 FSLSSVLQACANMPLLDLGKQIHNHA--IKIGHESELFVGNALIDLYAKCSDMESSLEIF 791
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
++ N S++++I+G++ G AA+ +F +M VT+ VL AC+
Sbjct: 792 SSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASIN 851
Query: 300 HVGLKCYGVSPSTDHYACMV-----DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
HVG + ST + +V D + GC+ +A ++ E + E + W A++
Sbjct: 852 HVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGY 910
Query: 355 QIHRNPEIAQ 364
+H +AQ
Sbjct: 911 AVHGQAAMAQ 920
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 34/296 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + +N + L++G+ L+G +++ +L+ +R EG F L+ + K +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L +HA L G + +VG+ +I Y CG + +R+VFD + +D V+WT
Sbjct: 547 LGLAWGVHACACKL-GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWT---- 601
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AMV+ Y +N P ++ F +M+ A + +
Sbjct: 602 ---------------------------AMVSCYSENDCPENTLQIFSKMRVAVSKLNPFA 634
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ A L + + + + + +V AL+DMY+KCG+I+DA F
Sbjct: 635 LTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY--GALLDMYAKCGNIEDARLAFEM 692
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+ +V +S MI +A + A +LF M+++ PN + VL AC+++ L
Sbjct: 693 VTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPL 748
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 45/292 (15%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKV 110
S+ + L + C D G+ +H + GG DL+ N ++ MY K G G + +V
Sbjct: 428 SYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRV 487
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FD +PER++VS+ L+ +A G+ E A L
Sbjct: 488 FDGLPERNMVSFVTLVQGHALRGEFEEASAL----------------------------- 518
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F+R+++ G E + L V+ + + A W A G N VGSALID
Sbjct: 519 --FQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA-WGVH-ACACKLGHDRNAFVGSALID 574
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
YS CG + DA R+F G+ ++ ++++M+ ++ + +Q+F M +K N
Sbjct: 575 AYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFA 634
Query: 291 FIGVLTAC---SHV----GLKCYGVSPSTDH----YACMVDLLGRAGCLEEA 331
VL A S V G+ V D Y ++D+ + G +E+A
Sbjct: 635 LTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDA 686
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 313/559 (55%), Gaps = 52/559 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +F+ + + + F + +IR + S+SL+ M G+ P FT + KAC
Sbjct: 39 SYARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKAC 97
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G +H+ LG F SD+YV N +I Y CGFL + K F+E
Sbjct: 98 ARL---QTGLDLHSLLFKLG-FDSDVYVQNGLIHFYGCCGFLDFALKAFEE--------- 144
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-V 181
+P +D V+W++M+ + +N EA+ F+RMQ G V
Sbjct: 145 ----------------------MPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTV 182
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D V ++ V+SA + LG ++ W+ +G V +G+AL+DM+S+CG I+++
Sbjct: 183 KPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE--FTVSLGTALVDMFSRCGCIEES 240
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F M +RNV +++++I G A+HGR+ A+++F +M +P+ VTF GVL ACSH
Sbjct: 241 MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300
Query: 302 GLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL YG+ P +HY CMVDLLGRAG L EA K V+ MP+ PN +W
Sbjct: 301 GLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRT 360
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGAC H E+A+ + EL+ G+Y++LSN+Y G W + + VR ++ +
Sbjct: 361 LLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRI 420
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K PG S + + +IHEF AGD HP I++ L ++D L+ GY P++ +VL+D+
Sbjct: 421 SKKPGCSLINVNH-LIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIE 479
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK+ L HSEKLA+AF LL T+R+MKNLRIC DCH FM AS V REI++R
Sbjct: 480 EEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIR 539
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF G CSC +YW
Sbjct: 540 DRNRFHHFSKGSCSCRDYW 558
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 318/564 (56%), Gaps = 53/564 (9%)
Query: 3 SFPRLVFEQVKYKNPFLW-TALIRGYILQGHLKDS-----ISLYCSMRREGIGPVSFTLS 56
++ R VF++V + +W L+RGY + S + ++ M EG+ P ++T
Sbjct: 78 AYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFV 137
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
+L KAC G+Q HA + LG D YV T+I MY +CG +R +F
Sbjct: 138 SLLKACAAARAGEEGRQAHALAVKLGAADHD-YVRPTLINMYAECGDARAARVMFGG--- 193
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+ GG V++ AM+ V++++P EA+ F M
Sbjct: 194 --------------------TDGGCV--------VSYNAMIAAAVRSSRPGEALVLFREM 225
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
Q G++ VT++ V+SACA LG ++ WV + G G + V V +ALIDMY+KCG
Sbjct: 226 QGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSL--VKVSTALIDMYAKCG 283
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S++DA +F GM+ ++ ++S MI+ +A HG AI LF +M K KP+ +TF+GVL
Sbjct: 284 SLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLY 343
Query: 297 ACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
ACSH GL K +G+ P HY C+ DLL R+G LE A K ++++P+ P
Sbjct: 344 ACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPI 403
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL AC H + E+ + + +L+ G+Y+I SN+ A+ G W++++ VR+L+
Sbjct: 404 LWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMS 463
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+ K PG S +E D +HEF AGD HP S E ++ + +++D+L+ GY PN V
Sbjct: 464 EKGVVKVPGCSSIEID-NTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVF 522
Query: 466 Y-DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+ ++ +EEK L HSEKLA+AFGLL T+PGAT+R++KNLR+C DCH S V R
Sbjct: 523 HVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNR 582
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF++G CSCG+YW
Sbjct: 583 RIILRDLNRFHHFEEGICSCGDYW 606
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 311/556 (55%), Gaps = 49/556 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + ++ W ++I G + ++ L+ M G+ P TL +L A + D
Sbjct: 225 VFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD 284
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +H G D+ GN M+ MY K + ++KV
Sbjct: 285 ELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKV----------------- 327
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETDYV 186
F+ LP +D V+W ++TGY+QN EAI + M + G++
Sbjct: 328 --------------FDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQG 373
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V V+ A + LG ++ + ++ +G +V V + LID+Y+KCG + +A +F
Sbjct: 374 TFVSVLPAYSYLGGLQQGMRMHALSIKTGLN--LDVYVTTCLIDLYAKCGKLVEAMFLFE 431
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M +R+ ++++I G +HG A+ LF M + E KP+ VTF+ +L ACSH GL
Sbjct: 432 HMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQ 491
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P HY CMVD+LGRAG L+EA + ++ MP++P+ VWGALLGAC
Sbjct: 492 GRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGAC 551
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N E+ ++A+ +LFEL+P+ +G Y+++SN+YA G WD V VR L++ L+K PG
Sbjct: 552 RIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPG 611
Query: 415 YSWLEGDRGVIHEFRAGDLT--HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
+S +E +G + F +G T HP EIQ+ L DLL ++++ GY P+ VL DV ++E
Sbjct: 612 WSSME-VKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDE 670
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++IL HSE+LA+AFG++ T PG + I KNLR+C DCH S++ REI+VRD
Sbjct: 671 KEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDAN 730
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 731 RFHHFKDGHCSCGDFW 746
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 194/402 (48%), Gaps = 49/402 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W A++ G D+++L M EG+ + TLS++ C + D
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+L +H + G + +L+V N +I +Y K G L + VF M RD+V+W +I
Sbjct: 184 RALALVMHVYAV-KHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIIS 242
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A NE Q K A+E F M +GV D +T
Sbjct: 243 A--------------NE-----------------QGGKVAAAVELFHGMMESGVCPDVLT 271
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV + SA AQ G A V G+ + +++ G+A++DMY+K ID A ++F
Sbjct: 272 LVSLASAVAQCGDELGAKSVHCYVRRRGWD-VGDIIAGNAMVDMYAKMSKIDAAQKVFDN 330
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHV----- 301
+ R+V S++++I G+ +G A+ AI+++ DM E KP TF+ VL A S++
Sbjct: 331 LPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQ 390
Query: 302 GLKCYGVSPST----DHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G++ + +S T D Y C++DL + G L EA+ + E MP + G W A++
Sbjct: 391 GMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP-RRSTGPWNAIIAGLG 449
Query: 356 IHRN--PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
+H + ++ + E++PD + ++ L + AG+ D
Sbjct: 450 VHGHGAKALSLFSQMQQEEIKPDHV-TFVSLLAACSHAGLVD 490
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 48/302 (15%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P SFT L +A + Q+HA + LG +++ +++ Y++ G + + +
Sbjct: 67 PDSFTFPPLVRAAPGPASAA---QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD E+P +D AW AM++G +N + +A
Sbjct: 124 VFD-------------------------------EMPERDVPAWNAMLSGLCRNTRAADA 152
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
+ RM GV D VTL V+ C LG A + A G + V +ALI
Sbjct: 153 VTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLS--GELFVCNALI 210
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
D+Y K G + +A+ +F GM R++ +++S+I G+ AA++LF M+++ P+ +
Sbjct: 211 DVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVL 270
Query: 290 TFIGVLTACSHVG-------LKCYGVSPSTD-----HYACMVDLLGRAGCLEEALKMVEK 337
T + + +A + G + CY D MVD+ + ++ A K+ +
Sbjct: 271 TLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDN 330
Query: 338 MP 339
+P
Sbjct: 331 LP 332
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 327/556 (58%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTE 64
R +F+++ ++ F W A I GY+ ++++ L+ M+R E FTLS+ A
Sbjct: 173 RKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAA 232
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + LG++IH ++ D V + ++ +Y KCG L +R +FD+M +RDVVSWT
Sbjct: 233 IPCLRLGKEIHG-YLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTT 291
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I +G E LF +L MQ +GV +
Sbjct: 292 MIHRCFEDGRREEGFLLFRDL------------------------------MQ-SGVRPN 320
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T GV++ACA V +G+ P + + SAL+ MYSKCG+ A R+
Sbjct: 321 EYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAI--SALVHMYSKCGNTRVARRV 378
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M Q ++ S++S+I+G+A +G+ A+ F ++++ TKP+ VT++GVL+AC+H GL
Sbjct: 379 FNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLV 438
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ + DHYAC++DLL R+G +EA +++ MPV+P+ +W +LLG
Sbjct: 439 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLG 498
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH N E+A+ AA L+E+EP+ YI L+NIYA+AG+W +V+ VR+ + G+ K
Sbjct: 499 GCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKK 558
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E R V H F GD +HP +++I + LG+L +++ +GY P+ VL+DV +E+
Sbjct: 559 PGKSWIEIKRQV-HVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQ 617
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L+ HSEKLA+ FG+++T PG +++ KNLR C DCH + S+++ R+I VRD+
Sbjct: 618 KEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSN 677
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F+DG CSC +YW
Sbjct: 678 RFHCFEDGSCSCKDYW 693
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 199/385 (51%), Gaps = 32/385 (8%)
Query: 30 QGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLY 89
Q +K+++ L + R P + S L AC + LG+++HA T F ++
Sbjct: 68 QKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHT-KASNFVPGVF 123
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
+ N ++ MY KCG L ++ +FDEM RD+ SW +IV YA G +E A LF+E+P +D
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD 183
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+W A ++GYV + +PREA+E F MQ + ++ TL ++A A + ++
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGK--- 240
Query: 209 EIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG 267
EI +N + VV SAL+D+Y KCGS+D+A IF MK R+V S+++MI G
Sbjct: 241 EIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDG 300
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKCY------GVSPSTDHYA 316
R LF D++++ +PN TF GVL AC+ H+G + + G P + +
Sbjct: 301 RREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAIS 360
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL--- 373
+V + + G A ++ +M +P+ W +L+ + P+ A H FEL
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEMH-QPDLVSWTSLIVGYAQNGQPD----EALHFFELLLQ 415
Query: 374 ---EPDKIGNYIILSNIYASAGMWD 395
+PD++ Y+ + + AG+ D
Sbjct: 416 SGTKPDQV-TYVGVLSACTHAGLVD 439
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 307/543 (56%), Gaps = 51/543 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GYI+ G ++ LY M+ G TL KA ++ + G+QIHA +
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHA-VV 1164
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ GF DL+V + ++ MY+KCG +MESA
Sbjct: 1165 VKRGFNLDLFVTSGVLDMYLKCG-------------------------------EMESAR 1193
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+E+P D VAWT M++G V+N + A+ + +M+ + V+ D T ++ AC+ L
Sbjct: 1194 RVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLT 1253
Query: 200 VIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
++ + + F P V ++L+DMY+KCG+I+DA +F R + S++
Sbjct: 1254 ALEQGRQIHANIVKLNCAFDPF----VMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWN 1309
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
+MI+G A HG A A+Q F M P+ VTFIGVL+ACSH GL K
Sbjct: 1310 AMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKN 1369
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
YG+ P +HY+C+VD L RAG +EEA K++ MP E + ++ LL AC++ + E +
Sbjct: 1370 YGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKR 1429
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
A L LEP Y++LSN+YA+A W++V+ R +++ +KK+PG+SW++ + +
Sbjct: 1430 VAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDL-KNKV 1488
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H F AGD +H + I + ++ R++ +GY P+ L DV +E+K+ L HSEKLA
Sbjct: 1489 HLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLA 1548
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+A+GL+ T P T+R++KNLR+C DCH + S+V REIV+RD RFHHF++G CSCG
Sbjct: 1549 IAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCG 1608
Query: 546 NYW 548
+YW
Sbjct: 1609 DYW 1611
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 37/245 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ + WT +I G + G + ++ Y MR + P +T + L KAC+ +
Sbjct: 1193 RRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL 1252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA + L D +V +++ MY KCG + +R +F R + SW +
Sbjct: 1253 TALEQGRQIHANIVKL-NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAM 1311
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV A +G NAK EA+++F+ M+ GV D
Sbjct: 1312 IVGLAQHG-----------------------------NAK--EALQFFKYMKSRGVMPDR 1340
Query: 186 VTLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT +GV+SAC+ G++ Y N+ + + G P + S L+D S+ G I++A +
Sbjct: 1341 VTFIGVLSACSHSGLVSEAYENFY-SMQKNYGIEP--EIEHYSCLVDALSRAGRIEEAEK 1397
Query: 244 IFVGM 248
+ M
Sbjct: 1398 VISSM 1402
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 160/389 (41%), Gaps = 65/389 (16%)
Query: 3 SFPRLVFEQVKYKNPFL--WTALIRGYILQGHLK---DSISLYCSMRREGIGPVSFTLSA 57
S R +F+ N L W A++ L H D L+ +RR + TL+
Sbjct: 708 SSARKLFDTTPDTNRDLVTWNAILSA--LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAP 765
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+FK C S + +H + +G D++V ++ +Y K G + +R +FD M R
Sbjct: 766 VFKMCLLSASPSASESLHGYAVKIG-LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR 824
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNE--------------------------LPLK--- 148
DVV W ++ AY + A LF+E L LK
Sbjct: 825 DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFK 884
Query: 149 --------------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
D + W ++ ++Q + EA++ F M + V D +T V +++
Sbjct: 885 AYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTV 944
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A L ++ + I SG + V VG+ LI+MY K GS+ A +F M + ++
Sbjct: 945 VAGLNCLELGKQIHGIVMRSGLDQV--VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLI 1002
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------------HVG 302
S+++MI G + G ++ +F +++ P+ T VL ACS H
Sbjct: 1003 SWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHAC 1062
Query: 303 LKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
GV + ++D+ + G +EEA
Sbjct: 1063 AMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 47/373 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF Q+ + W +I G L G + S+ ++ + R+ + P FT++++ +AC
Sbjct: 987 SRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRAC 1046
Query: 63 TEVL-DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + L QIHA + G D +V +I +Y K
Sbjct: 1047 SSLEGGYYLATQIHA-CAMKAGVVLDSFVSTALIDVYSK--------------------- 1084
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
G ME A LF D +W A++ GY+ + +A+ + MQ +G
Sbjct: 1085 ----------RGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGE 1134
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+D +TLV A L +K + + GF ++ V S ++DMY KCG ++ A
Sbjct: 1135 RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNL--DLFVTSGVLDMYLKCGEMESA 1192
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
R+F + + ++++MI G +G+ A+ + M ++ +P+ TF ++ ACS
Sbjct: 1193 RRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL 1252
Query: 300 -------HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ ++ + D + +VD+ + G +E+A + ++ W A+
Sbjct: 1253 TALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIAS-WNAM 1311
Query: 351 LGACQIHRNPEIA 363
+ H N + A
Sbjct: 1312 IVGLAQHGNAKEA 1324
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 163/373 (43%), Gaps = 49/373 (13%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W + ++ +G +++ + M + T + + + LG+QIH
Sbjct: 902 VWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHG-I 960
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
++ G + VGN +I MYVK G + +R VF +M E D++SW +I +G E +
Sbjct: 961 VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
G+F L L+D + D T+ V+ AC+ L
Sbjct: 1021 VGMFVHL-LRDSLL------------------------------PDQFTVASVLRACSSL 1049
Query: 199 -GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
G A + A +G + + V +ALID+YSK G +++A +FV ++ S++
Sbjct: 1050 EGGYYLATQIHACAMKAGV--VLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWN 1107
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH-VGLKC----------Y 306
+++ G+ + G A++L+ M ++ + + +T + A VGLK
Sbjct: 1108 AIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKR 1167
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G + + ++D+ + G +E A ++ ++P P+ W ++ C + E A
Sbjct: 1168 GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEEHALFT 1226
Query: 367 ANH--LFELEPDK 377
+ L +++PD+
Sbjct: 1227 YHQMRLSKVQPDE 1239
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
++ + D+SLG++ HA+ IL G D +V N +I MY KCG L +RK+FD P+
Sbjct: 661 SILRQAIAASDLSLGKRAHAR-ILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719
Query: 117 --RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
RD+V+W ++ A A + D K + F
Sbjct: 720 TNRDLVTWNAILSALAAHAD------------------------------KSHDGFHLFR 749
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG--FGPINNVVVGSALIDMY 232
++ + V T TL V C ++ + E G G +V V AL+++Y
Sbjct: 750 LLRRSVVSTTRHTLAPVFKMC----LLSASPSASESLHGYAVKIGLQWDVFVAGALVNIY 805
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
+K G I +A +F GM R+V ++ M+ + + A+ LF + +T +P+ VT
Sbjct: 806 AKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 321/559 (57%), Gaps = 49/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
SF L F Q++ + W A+IRG+I + ++ + Y SM + + T S + KAC
Sbjct: 56 SFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKAC 115
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
VL QIH I+ GF +D +G T++ +Y K G
Sbjct: 116 ARVLARLESIQIHTH-IVRKGFIADALLGTTLLDVYAKVG-------------------- 154
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+++SA +F+E+ +D +W A+++G+ Q +KP EA+ F+RM+ G +
Sbjct: 155 -----------EIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFK 203
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ ++++G +SACAQLG K + + F N V + +IDMY+KCG +D AY
Sbjct: 204 PNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDM--NAQVCNVVIDMYAKCGFVDKAY 261
Query: 243 RIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F M ++++ ++++MI+ FAMHG A++LF M ++ P+ V+++ VL AC+H
Sbjct: 262 LVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHG 321
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL C GV P+ HY +VDLLGRAG L EA +V MP P+ +W
Sbjct: 322 GLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQT 380
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LLGA + HRN EIA+ + L E+ + G++++LSN+YA+ W DV RVR +K +
Sbjct: 381 LLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDV 440
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
KK PG S++EG+ GVIH+F D +H + EI L ++ R++ GY VL+D+
Sbjct: 441 KKVPGLSYIEGN-GVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDIG 499
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+E+K+ +L HSEKLA+AFGL++TS G ++++KNLRIC DCH + S++ REI+VR
Sbjct: 500 EEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVR 559
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFH F++G CSC +YW
Sbjct: 560 DRVRFHRFKEGFCSCRDYW 578
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 123 TELIVAYANN-GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
++L+ YA + G++ A F+++ W A++ G++Q+ P A +++ M
Sbjct: 42 SKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR 101
Query: 182 ETDYVTLVGVISACAQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D +T V+ ACA+ L ++ I G I + ++G+ L+D+Y+K G ID
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRK---GFIADALLGTTLLDVYAKVGEIDS 158
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F M +R++ S++++I GFA + A+ LF M KPN ++ +G L+AC+
Sbjct: 159 AEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQ 218
Query: 301 VG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+G +K + ++D+ + G +++A + E M + W
Sbjct: 219 LGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNT 278
Query: 350 LLGACQIH 357
++ A +H
Sbjct: 279 MIMAFAMH 286
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 312/554 (56%), Gaps = 53/554 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F+ + +N WT ++ G ++++ +MRR+G+ P ++T S++ ACT
Sbjct: 126 MFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTP- 184
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +HA T+ G SD++V +++I YVK
Sbjct: 185 --GMLTAVHASTVK-AGLDSDVFVRSSLIDAYVKL------------------------- 216
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
GD++ +F+E+ +D V W +++ G+ Q+ AIE F RM+ AG ++
Sbjct: 217 ------GDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQG 270
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ AC + +++ V ++++ +AL+DMY KCGS++DA +F
Sbjct: 271 TLTSVLRACTGMVMLEAGRQV----HAHVLKYDRDLILHNALLDMYCKCGSLEDADALFH 326
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M QR+V S+S+M+ G A +G++ A+++F M PN VT +GVL ACSH GL
Sbjct: 327 RMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVED 386
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ +G+ P +H+ CMVDLLGRAG L+EA++ + M +EP+ +W LLGAC
Sbjct: 387 GWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGAC 446
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N +A AA + +LEPD G ++LSN YA W D + + ++ G++K PG
Sbjct: 447 RMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPG 506
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E ++ V H F AGDL+HP S I Q L L+ R+++ GY P VL D+ E+K+
Sbjct: 507 RSWIELEKRV-HVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKE 565
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSEK+A+ FG + G +RIMKNLRIC DCH F S+ GR IV+RD +RF
Sbjct: 566 DLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRF 625
Query: 535 HHFQDGKCSCGNYW 548
HHFQDG CSCG+YW
Sbjct: 626 HHFQDGACSCGDYW 639
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 36/288 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ +W ++I G+ G +I L+ M+ G TL+++ +ACT +
Sbjct: 223 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGM 282
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+Q+HA + + DL + N ++ MY KCG L + +F MP+RDV+SW
Sbjct: 283 VMLEAGRQVHAHVL---KYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISW--- 336
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ MV+G QN K EA+ F+ M+ GV ++
Sbjct: 337 ----------------------------STMVSGLAQNGKSVEALRVFDLMKSQGVAPNH 368
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT+VGV+ AC+ G+++ W + FG + ++D+ + G +D+A
Sbjct: 369 VTMVGVLFACSHAGLVE-DGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFI 427
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
GM + + + +++ MH A A +++K E G +
Sbjct: 428 HGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 50/303 (16%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSD----LYVGNTMIGMYVKCGFLG 105
PVS T L K C G+ IH G D L+V N++ MY K G L
Sbjct: 64 PVSLT--RLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLD 121
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
+ ++FD MP R+VV+WT ++ A A+ + +
Sbjct: 122 DALRMFDGMPVRNVVTWTTVVAALAS------------------------------ADGR 151
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
+EA+ + M+ GV + T V+ AC G++ + A G ++V V
Sbjct: 152 KQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTAVH-----ASTVKAGLDSDVFVR 206
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
S+LID Y K G +D R+F M R++ ++S+I GFA G AI+LF M
Sbjct: 207 SSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFS 266
Query: 286 PNGVTFIGVLTACS-----HVGLKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVE 336
N T VL AC+ G + + D + ++D+ + G LE+A +
Sbjct: 267 SNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFH 326
Query: 337 KMP 339
+MP
Sbjct: 327 RMP 329
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQ-NAKPREAIEYFERMQYAG----------------VET 183
LF LP K +VA T + V +P ++ F R+ G +
Sbjct: 4 LFKRLPRK-RVAATRRSSRRVHAQPRPHPSLTTFSRLCVEGPLPAALALLSELAAAGLRA 62
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN---VVVGSALIDMYSKCGSIDD 240
D V+L ++ C + G + + E G P + + V ++L MY+K G +DD
Sbjct: 63 DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122
Query: 241 AYRIFVGMKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A R+F GM RNV ++++++ A GR A++ M + PN TF VL AC+
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182
Query: 300 HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
G+ V ST D+ R+ ++ +K+
Sbjct: 183 TPGM-LTAVHASTVKAGLDSDVFVRSSLIDAYVKL 216
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/480 (40%), Positives = 293/480 (61%), Gaps = 18/480 (3%)
Query: 84 FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP---ERDVVSWTELIVAYANNGDMESAGG 140
F S + N ++ Y+ G + ++F + DVVSWT ++ G ++ A
Sbjct: 123 FHSHAHSFNALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARK 182
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGV 200
LF+ +P ++ ++W AM++GYV+ + +A+E F++M+ G+E + + AC GV
Sbjct: 183 LFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGV 242
Query: 201 IKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+ V E SG + + +A++DMY KCGS+++A+ +F + + + S++ MI
Sbjct: 243 LARGREVHRWVEQSGI--TMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMI 300
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGV 308
G A+HGR AI+LF +M + + P+ VT + VLTAC+H G+ + YG+
Sbjct: 301 GGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGI 360
Query: 309 SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAAN 368
P +HY CMVDL GRAG L+EA K+++ MP+EP+ GV GAL GAC+IHR+ ++ +
Sbjct: 361 EPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGW 420
Query: 369 HLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEF 428
+ EL+P G Y++L+N+ ASAG W DV++VRRL+ + K G S +E D G + EF
Sbjct: 421 RVIELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEID-GEVCEF 479
Query: 429 RAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAF 488
+ G L H EI A+ D++ +++ +GY P+ VL+D+++EEK+ L HSEKLA+AF
Sbjct: 480 QCGSLCHAQEKEIFAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAF 539
Query: 489 GLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
GLL T PG TVRI KNLR+C DCH S+V REIVVRD RFHHF+DG CSC +YW
Sbjct: 540 GLLRTRPGDTVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N W A+I GY+ G D++ ++ MR GI F ++ ACT
Sbjct: 181 RKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGA 240
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+++H + + G T D + ++ MY KCG + + VF +P + + SW +
Sbjct: 241 GVLARGREVH-RWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCM 299
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G + ++AIE F M+ V D
Sbjct: 300 IGGLAVHG-------------------------------RCKDAIELFHEMEREDVAPDD 328
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTLV V++ACA G++ N+ I + G P + ++D++ + G +D+A ++
Sbjct: 329 VTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEP--KMEHYGCMVDLFGRAGLLDEAKKV 386
Query: 245 FVGM 248
M
Sbjct: 387 IDDM 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + K W +I G + G KD+I L+ M RE + P TL + AC
Sbjct: 284 VFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGM 343
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
VS G + G + M+ ++ + G L ++KV D+MP
Sbjct: 344 VSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMP 391
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 328/558 (58%), Gaps = 21/558 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC-TEVL 66
VF ++ LW I + L+ + L+ M+ + + T+ + +A +E+
Sbjct: 580 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELG 639
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+++G++ H +L GF D+YVG ++I MYVK L ++ VFD M R++ +W L+
Sbjct: 640 FLNMGKETHG-YVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLV 698
Query: 127 VAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
Y+ G E A L N++ + D V W M++GY +EA+ +F +MQ GV
Sbjct: 699 SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVM 758
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ ++ ++ ACA L +++ + ++ +GF I +V V +ALIDMYSK S+ +A+
Sbjct: 759 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGF--IEDVFVATALIDMYSKSSSLKNAH 816
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F ++ + + S++ MI+GFA+ G AI +F +M K P+ +TF +L+AC + G
Sbjct: 817 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 876
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L Y + P +HY CMVDLLGRAG L+EA ++ MP++P+ +WGAL
Sbjct: 877 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 936
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG+C+IH+N + A+ AA +LF+LEP+ NYI++ N+Y+ W+D+ +R L+ G++
Sbjct: 937 LGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 996
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
+SW++ ++ V H F + + HP++ +I L L+ ++ GY P++ V ++ +
Sbjct: 997 NRQVWSWIQINQRV-HVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDE 1055
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EK++IL++H+EKLA+ +GL+ G +R++KN RIC DCH S V RE+ +RD
Sbjct: 1056 VEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRD 1115
Query: 531 NMRFHHFQDGKCSCGNYW 548
+RFHHF++GKCSC ++W
Sbjct: 1116 GVRFHHFREGKCSCNDFW 1133
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 63/345 (18%)
Query: 15 KNPFLWTALIRGYILQ-GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+N W + + + G L + ++ + +G+ S S K CT V+D+ LG +
Sbjct: 485 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 544
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IH ++ GF D+Y+ ++ Y +C L + +VF EMP + + W E I+
Sbjct: 545 IHG-CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIIL----- 598
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
+Q+ K ++ +E F +MQ++ ++ + T+V V+
Sbjct: 599 --------------------------NLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 632
Query: 194 AC-AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
A ++LG + +GF +V VG++LIDMY K S+ A +F MK RN
Sbjct: 633 ASISELGFLNMGKETHGYVLRNGFD--CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRN 690
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST 312
+F+++S++ G++ G A++L M K KP+ VT+ G+++
Sbjct: 691 IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG--------------- 735
Query: 313 DHYACMVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGALLGAC 354
YA GC +EAL +M E PN LL AC
Sbjct: 736 --YAMW-------GCGKEALAFFAQMQQEGVMPNSASITCLLRAC 771
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 312/556 (56%), Gaps = 49/556 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ W ++I G +G ++ ++ MR G+ P TL +L A + D
Sbjct: 226 VFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGD 285
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +H + G D+ GN ++ MY K
Sbjct: 286 GRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLS------------------------- 320
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETDYV 186
++E+A +F+ +P++D V+W ++TGY+QN EA+E + MQ + G++
Sbjct: 321 ------NIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQG 374
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V V+ A + LG ++ + ++ G +V VG+ LID+Y+KCG + +A +F
Sbjct: 375 TFVSVLPAYSHLGALQQGMRMHALSIKIGLNV--DVYVGTCLIDLYAKCGKLAEAMLLFE 432
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK-- 304
M +R+ ++++I G +HG A+ LF M + KP+ VTF+ +L ACSH GL
Sbjct: 433 KMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQ 492
Query: 305 ----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
Y + P HYACM D+LGRAG L+EA ++ MP++P+ VWGALLGAC
Sbjct: 493 GRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGAC 552
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N E+ ++A+ +LFEL+P+ +G Y+++SN+YA G WD V VR L++ L+K PG
Sbjct: 553 RIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG 612
Query: 415 YSWLEGDRGVIHEFRAGDLT--HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
+S +E R V + F +G+ T HP EIQ L LL ++++ GY + VL DV D+E
Sbjct: 613 WSSIEVKRSV-NVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDE 671
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ IL HSE+LA+AFG++ T + I KNLR+C DCH SQ+ REI+VRD+
Sbjct: 672 KEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSN 731
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 732 RFHHFKDGHCSCGDFW 747
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%), Gaps = 46/362 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W A++ G +++ L+ M EG+ + T+S++ C + D
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
L +H + G +L+V N +I +Y K G L ++ VF M RD+V+W +I
Sbjct: 185 QVLALVMHVYAV-KHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII- 242
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+G Q + A++ F+ M+ +GV D +T
Sbjct: 243 ------------------------------SGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV + SA AQ G + A + G+ +++++ G+A++DMY+K +I+ A R+F
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWD-VDDIIAGNAIVDMYAKLSNIEAAQRMFDS 331
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGLKCY 306
M ++ S++++I G+ +G A+ A++ +G M K E K TF+ VL A SH+G
Sbjct: 332 MPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQ 391
Query: 307 G---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G + + D Y C++DL + G L EA+ + EKMP + G W A++
Sbjct: 392 GMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIISGLG 450
Query: 356 IH 357
+H
Sbjct: 451 VH 452
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
V + L+ AY G + A +F+E+ +D AW AM++G +NA+ EA+ F RM
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 179 AGVETDYVTLVGVISACAQLG--VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV D VT+ V+ C LG V+ V + G + V +ALID+Y K G
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLD----KELFVCNALIDVYGKLG 218
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+++A +F GM+ R++ +++S+I G G+ AA+++F M + P+ +T + + +
Sbjct: 219 MLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLAS 278
Query: 297 ACSHVG-------LKCYGVSPSTD-----HYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A + G L CY + D +VD+ + +E A +M + MPV+ +
Sbjct: 279 AIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQ-DS 337
Query: 345 GVWGALL 351
W L+
Sbjct: 338 VSWNTLI 344
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+V +L+ Y + G I +AY++F M +R+V ++++M+ G + RA A+ LFG MV
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMV 161
Query: 281 KTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDH--YAC--MVDLLGRAGCLE 329
+ VT VL C +G + Y V D + C ++D+ G+ G LE
Sbjct: 162 GEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLE 221
Query: 330 EALKMVEKMPVEPNGGVWGALLGACQ 355
EA + M + W +++ C+
Sbjct: 222 EAQCVFHGMECR-DLVTWNSIISGCE 246
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L+FE++ ++ W A+I G + GH ++++L+ M++EGI P T +L AC+
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG 488
Query: 67 DVSLGQ 72
V G+
Sbjct: 489 LVDQGR 494
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 308/553 (55%), Gaps = 44/553 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++ ++ W +I G + GH D++S M + G+ +T S F +L
Sbjct: 200 LFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLL 259
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG+Q+H + +L+ D +V ++++ MY KCG L + VFD W+ L
Sbjct: 260 PDLGRQLHGR-VLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH--------WSPL-- 308
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
DM AW+ MV GYVQN + EA++ F RM GV D T
Sbjct: 309 ----TRDM--------------NFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT 350
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V +ACA +G+++ V E + + + SA++DMY+KCG+++DA IF
Sbjct: 351 LTSVAAACANVGMVEQGRQVHGCVEKLWYKL--DAPLASAIVDMYAKCGNLEDARSIFDR 408
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+N+ ++SM+ +A HG+ AI+LF M + PN +T +GVL+ACSHVGL
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ PS +HY C+VDL GR+G L++A +E+ + VW LL AC+
Sbjct: 469 ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACR 528
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++ E A++A+ L +LE G+Y++LSNIYA+ W D +R ++ ++K PG
Sbjct: 529 LHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGR 588
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+ + +H F AGD +HP S EI L L++RL+ GY V++DV DE+++
Sbjct: 589 SWIHL-KNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRET 647
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFG+++T G +RI KNLR+CEDCH + S GREIVVRD RFH
Sbjct: 648 ALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFH 707
Query: 536 HFQDGKCSCGNYW 548
HF+D CSC ++W
Sbjct: 708 HFKDASCSCEDFW 720
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 39/383 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R VF++ + +WT I G +G D + + M EG P +F L+A+ + C
Sbjct: 65 RGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAG 124
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV G+++H +L G D+ + N ++ MY KCG +R+VF M ERD VSW
Sbjct: 125 MGDVESGKRVHGW-MLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNI 183
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
I A +GD+ + LF+E PL+D +W +++G +++ +A+ + RM AGV +
Sbjct: 184 AIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFN 243
Query: 185 YVT------LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ T L G++ LG + + EG F V S+L+DMY KCG +
Sbjct: 244 HYTYSTAFVLAGML-LLPDLGRQLHGRVLIAALEGDAF-------VRSSLMDMYCKCGLL 295
Query: 239 DDAYRIF---VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+ A +F + + F++S+M+ G+ +GR A+ LF M++ + T V
Sbjct: 296 EAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVA 355
Query: 296 TACSHVGLKCYGVSPSTDHYAC---------------MVDLLGRAGCLEEALKMVEKMPV 340
AC++VG+ V + C +VD+ + G LE+A + ++
Sbjct: 356 AACANVGM----VEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR-AC 410
Query: 341 EPNGGVWGALLGACQIHRNPEIA 363
N VW ++L + H IA
Sbjct: 411 TKNIAVWTSMLCSYASHGQGRIA 433
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET-DYVTLVGVISACA 196
A G+F+E P + WT ++G + + + + F M G T + L V+ CA
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+G ++ V +G +VV+ +A++DMY+KCG + A R+F M +R+ S+
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHL--DVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ I G ++QLF + +T G++ +
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRS 222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 4/176 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++ KN +WT+++ Y G + +I L+ M E + P TL + AC+ V
Sbjct: 403 RSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHV 462
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
VS G+ Q G + N ++ +Y + G L ++ +E + + W
Sbjct: 463 GLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKT 522
Query: 125 LIVA---YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
L+ A + +N + A +L D ++ + Y N K + E MQ
Sbjct: 523 LLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQ 578
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/463 (41%), Positives = 288/463 (62%), Gaps = 21/463 (4%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-----REGIGPVSFTLSAL 58
+ L+F++V N FL+ A+IR Y +I++Y M I P FT +
Sbjct: 64 YANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFV 123
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
K+C ++ LG+Q+H G S+ V N+++ MYVKC L + KVF+EM ERD
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQ-KSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERD 182
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VSW LI + G M A +F E+ K +WTA+V+GY + +A+E+F RMQ
Sbjct: 183 AVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQM 242
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+E D ++LV V+ ACAQLG ++ W+ A+ +GF + N+ V +ALI+MY+KCGSI
Sbjct: 243 VGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGF--LRNICVCNALIEMYAKCGSI 300
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D+ R+F M +R+V S+S+MI+G A HGRAH AI+LF +M K + +PN +TF+G+L+AC
Sbjct: 301 DEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSAC 360
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
+H GL + Y + P +HY C+V+LLG +G L++AL++++KMP++P+ +
Sbjct: 361 AHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAI 420
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WG+LL +C+ H N EIA IA HL ELEP GNY++LSN+YA G WD VSR+R+L++
Sbjct: 421 WGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRS 480
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLL 449
+KK PG S +E D ++ EF +GD + P S I + L L+
Sbjct: 481 KSMKKTPGCSSIEVD-NMVQEFASGDDSKPFSKAIYRVLKLLV 522
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/560 (35%), Positives = 317/560 (56%), Gaps = 24/560 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR----EGIGPVSFTLSALFKA 61
RL+F++ ++ L+++L+ H + + +RR + + P F L+++ A
Sbjct: 58 RLLFDETPRRDLHLYSSLLAAV---SHSESPELVLPLLRRMLSADALRPDHFVLASIASA 114
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + LG+Q+H + ++SD V +++I MY KCG +RKVFD + ++ V
Sbjct: 115 TARLRSLCLGKQLHGHFVA-SPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVM 173
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
WT LI Y NG + A LF +P + AWTA+++G+V++ + A++ F M+ GV
Sbjct: 174 WTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGV 233
Query: 182 ETD-YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D L I A L + + GF ++++VG+A++DMYSKC I
Sbjct: 234 SIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFS--SSMIVGNAVVDMYSKCSDIHS 291
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F + R++ S+++M++G A HGRA A L+ MV KPN VTF+G++ ACSH
Sbjct: 292 AREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSH 351
Query: 301 VGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL YG++P HY C +DLL R+G L EA +++ MP P+ W
Sbjct: 352 AGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWA 411
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
+LL AC+ + N E++ A++L EL P Y++LSN+YA G WD V VR+L+
Sbjct: 412 SLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADME 471
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
++K PGYSW+E R F AG++ EI L +L+ ++ GY P+ SV++D+
Sbjct: 472 IRKEPGYSWIEVGRE-FRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDL 530
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ EK+ L HSE+LA+AFG+L + G+ +R++KNLR+C DCH M S++ R+I+V
Sbjct: 531 EEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIV 590
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+ GKCSC +W
Sbjct: 591 RDASRFHHFEGGKCSCSEFW 610
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ Y K L +R +FDE P RD+ ++ L+ A ++
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSH---------------------- 81
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
+ P + RM A + D+ L + SA A+L + +
Sbjct: 82 ---------SESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFV 132
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
S + ++ VV S+LIDMY KCG DDA ++F + +N ++++I G+ ++GR+ A
Sbjct: 133 ASPYS--SDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEA 190
Query: 273 IQLFGDM 279
++LF M
Sbjct: 191 LELFRSM 197
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 305/553 (55%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ + ++ K+ WT++I GY+ K+++ + M+ GI P + L++ AC +
Sbjct: 402 ILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKA 461
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G QIHA+ + + G+++D+ + W L+
Sbjct: 462 VHQGSQIHAR-VYVSGYSADVSI-------------------------------WNGLVY 489
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA G + A F + K+ + W +++G+ Q+ EA++ F +M AG + + T
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFT 549
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V ISA A L IK + +G+ + + +ALI +Y KCGSI+DA F
Sbjct: 550 FVSSISASANLADIKQGKQIHARVIKTGY--TSETEISNALISLYGKCGSIEDAKMDFFE 607
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
M +RN S++++I + HGR A+ LF M + KP+ VTF+GVLTACSHVGL
Sbjct: 608 MTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
Query: 305 -CY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
CY G+ P DHYAC+VD+LGRAG L+ A + VE+MP+ + VW LL AC+
Sbjct: 668 LCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACK 727
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N EI + AA HL ELEP +Y++LSN YA G W ++R+++K G++K PG
Sbjct: 728 VHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGR 787
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + V+H F GD HP + +I L L DRL GY+ + ++ E K
Sbjct: 788 SWIEV-KNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDP 846
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
HSEKLA+AFGL++ +R++KNLR+C DCH +M S V+GREIV+RD RFH
Sbjct: 847 TAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFH 906
Query: 536 HFQDGKCSCGNYW 548
HF +G CSCG+YW
Sbjct: 907 HFNNGSCSCGDYW 919
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 165/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ N LW ++ Y L S ++ M G+ P FT + + CT +
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+QIH+ TI GF SD+YV +I MY K G+L ++++ D + E
Sbjct: 361 IGLGEQIHSLTIK-NGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEE----------- 408
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
KD V+WT+M+ GYVQ+ +EA+E F+ MQ G+ D +
Sbjct: 409 --------------------KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG 448
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L ISACA + + + + SG+ +V + + L+ +Y++CG +A+ F
Sbjct: 449 LASAISACAGIKAVHQGSQIHARVYVSGYSA--DVSIWNGLVYLYARCGISKEAFSSFEA 506
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
++ + +++ +I GFA G A+++F M + K N TF+ ++A +
Sbjct: 507 IEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQG 566
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
H + G + T+ ++ L G+ G +E+A KM + N W ++ C
Sbjct: 567 KQIHARVIKTGYTSETEISNALISLYGKCGSIEDA-KMDFFEMTKRNEVSWNTIITCCSQ 625
Query: 357 H 357
H
Sbjct: 626 H 626
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 199/481 (41%), Gaps = 106/481 (22%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ W A++ GY G ++++ LY M R G+ P + LS++ ACT+
Sbjct: 97 RRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKT 156
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG+ IH Q + GF S+ +VGN +I +Y++C + +VF +M D V++ L
Sbjct: 157 ELFQLGRLIHVQ-VYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTL 215
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTG---------------------- 159
I +A G + A G+F+E+ L D V +++
Sbjct: 216 ISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGM 275
Query: 160 -------------YVQNAKPREAIEYFE-------------------------------R 175
YV++ EA++ F+ R
Sbjct: 276 SLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYR 335
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M AGV + T ++ C G I + + +GF +++ V LIDMYSK
Sbjct: 336 MLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ--SDMYVSGVLIDMYSKY 393
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +D A RI +++++V S++SMI G+ H A++ F +M P+ + +
Sbjct: 394 GWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAI 453
Query: 296 TACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
+AC+ H + G S + +V L R G +EA E + G
Sbjct: 454 SACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE-HKEG 512
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGN----YIILSNIYASAGMW 394
W L I+ A + L+E ++ D+ G + +S+I ASA +
Sbjct: 513 ITWNGL-----------ISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLA 561
Query: 395 D 395
D
Sbjct: 562 D 562
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 45/275 (16%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
+IHA+ I+ G + +GN +I +Y K GF+ +R+V
Sbjct: 63 EIHAKAIICG-LSGYRIIGNLLIDLYAKKGFVRRARRV---------------------- 99
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
F EL ++D V+W A+++GY QN EA+ + M +GV L ++
Sbjct: 100 ---------FEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSIL 150
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
SAC + + + + GF + VG+ALI +Y +C S A R+F M +
Sbjct: 151 SACTKTELFQLGRLIHVQVYKQGF--FSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKC 305
+++++I G A G A+ +F +M + P+ VT +L ACS VG L
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268
Query: 306 Y----GVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
Y G+S ++DL ++G +EEAL++ +
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 311/562 (55%), Gaps = 51/562 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV--SFTLSALFK 60
++ L+ + +N F +IR Y ++ L+ SM + P FT L K
Sbjct: 45 TYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLK 104
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+C + +G+Q+H I G SD YV N +I MY CG G + KVF +M +RDV
Sbjct: 105 SCARLKQPRVGKQLHG-LIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDV- 162
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
V+WT+M+ G+V + + EAI FE M G
Sbjct: 163 ------------------------------VSWTSMIDGFVDDDRALEAIRLFEEMVEDG 192
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
VE + T+V V+ ACA G + V + E G NV +ALIDMY+KCGSI
Sbjct: 193 VEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANV--RTALIDMYAKCGSIGS 250
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A ++F G+ ++VF++++MI G A HG A+ LF M +P+ T VL+AC +
Sbjct: 251 ARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRN 310
Query: 301 VG-----------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G + C YG+ P+ HY CMVDLL R G L+EA + + KMP+EP+ +W
Sbjct: 311 AGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWR 370
Query: 349 ALLGACQIHRNPEIAQ--IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
L+ A ++H + + ++ + L +++ D G+Y++L N+YASAG W D +++R L+
Sbjct: 371 TLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQ 430
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
GL K PG S +E D G++HEF AGD H + +I L ++ +RL+A+GY P L VL
Sbjct: 431 KGLSKPPGCSRIEVD-GLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLL 489
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
++ ++EK L HSEKLA+AFGL+ TSPG +RI+KNLR CEDCH + S++ ++I
Sbjct: 490 EIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDI 549
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD +RFHHF +G CSC +YW
Sbjct: 550 IVRDRIRFHHFINGDCSCKDYW 571
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 314/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ + +I GY G K + L+ ++ F + + +
Sbjct: 305 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 364
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD +G+QIHAQTI+ S++ VGN+++ MY KCG
Sbjct: 365 LDWEMGRQIHAQTIVTTA-DSEILVGNSLVDMYAKCG----------------------- 400
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F L + V WTAM++ YVQ E ++ F +M+ A V D
Sbjct: 401 --------KFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 452
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T ++ A A + + + SGF ++NV GSAL+D+Y+KCGSI DA + F
Sbjct: 453 ATFASLLRASASIASLSLGKQLHSFIIKSGF--MSNVFSGSALLDVYAKCGSIKDAVQTF 510
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M RN+ S+++MI +A +G A A ++ F +MV + +P+ V+F+GVL+ACSH GL
Sbjct: 511 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +HYA +VD+L R+G EA K++ +MP++P+ +W ++L A
Sbjct: 571 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630
Query: 354 CQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N E+A+ AA+ LF +E + Y+ +SNIYA+AG W++VS+V + ++ G+KK
Sbjct: 631 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 690
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
P YSW+E + H F A D HP EI++ + L ++ GY+P+ L++ ++
Sbjct: 691 PAYSWVEI-KHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKF 749
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HSE+LA+AF L++T G+ + +MKNLR C DCH + S+++GREI VRD+
Sbjct: 750 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDST 809
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 810 RFHHFRDGFCSCGDFW 825
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 146/290 (50%), Gaps = 24/290 (8%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF D N +G ++K G L +R++F++MP ++ VS +I Y +G++ A
Sbjct: 43 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA-- 196
LF+ + + V WT ++ GY Q + +EA E F +MQ G E DYVT V ++S C
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162
Query: 197 QLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
++G N + ++ + G + ++VG+ L+D Y K +D A ++F M + + S
Sbjct: 163 EMG-----NQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHY 315
Y++MI G++ G A+ LF +M + KP TF VL C+++GL + +
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSF 275
Query: 316 A-------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
++D + + +A K+ ++MP E +G + ++
Sbjct: 276 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIIS 324
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 154/359 (42%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + + WT LI GY K++ L+ M+R G P T L C
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ Q+ Q I LG + S L VGNT++ Y K
Sbjct: 163 EMGNQITQVQTQIIKLG-YDSRLIVGNTLVDSYCK------------------------- 196
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+N D+ A LF E+P D V++ AM+TGY ++ +A+ F MQ +G++
Sbjct: 197 ----SNRLDL--ACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTE 250
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+ A L I + + F + NV V +AL+D YSK S+ DA ++F
Sbjct: 251 FTFAAVLCANIGLDDIVLGQQIHSFVIKTNF--VWNVFVSNALLDFYSKHDSVIDARKLF 308
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH----- 300
M +++ SY+ +I G+A G+ A LF ++ T F +L+ S+
Sbjct: 309 DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWE 368
Query: 301 VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G + + + T + +VD+ + G EEA +M+ + W A++ A
Sbjct: 369 MGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 308/556 (55%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ W A+I GY + +++ LY M+ EG+ P T L AC
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH + IL G S+ ++ N ++ MY +CG L ++ VF+ RDV+S
Sbjct: 445 SAYADGKMIH-EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS---- 499
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +M+ G+ Q+ A + F+ MQ +E D
Sbjct: 500 ---------------------------WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V+S C ++ + SG +V +G+ALI+MY +CGS+ DA +F
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQL--DVNLGNALINMYIRCGSLQDARNVF 590
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP-NGVTFIGVLTACSHVGL- 303
++ R+V S+++MI G A G AI+LF M +P +G TF +L+AC+H GL
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLV 650
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YGV P+ +HY C+V LLGRA +EA ++ +MP P+ VW LLG
Sbjct: 651 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLG 710
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N +A+ AAN+ +L YI+LSN+YA+AG WDDV+++RR+++ G++K
Sbjct: 711 ACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 770
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E D +IHEF A D +HP + EI L L ++ GY P+ + VL+D+
Sbjct: 771 PGRSWIEVD-NIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAH 829
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
++ L THSE+LA+A+GL+ T PG +RI KNLRIC DCH S+++GREI+ RD+
Sbjct: 830 QETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSN 889
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F++GKCSC +YW
Sbjct: 890 RFHSFKNGKCSCEDYW 905
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 168/360 (46%), Gaps = 46/360 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+ + ++ ++ ALI GH ++ Y MR +G+ T ++ AC+
Sbjct: 284 KQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH+ I G +SD+ +GN +I MY +CG L +R++F MP+RD++SW +
Sbjct: 344 KALEAGKLIHSH-ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA D EA+ +++MQ GV+
Sbjct: 403 IAGYARREDRG-------------------------------EAMRLYKQMQSEGVKPGR 431
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + ++SACA + E SG +N + +AL++MY +CGS+ +A +F
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRSGIK--SNGHLANALMNMYRRCGSLMEAQNVF 489
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
G + R+V S++SMI G A HG A +LF +M E +P+ +TF VL+ C
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G+ + ++++ R G L++A + + + W A++G C
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 204/464 (43%), Gaps = 93/464 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ W +LI Y QG K + L+ M+ G P T ++ AC +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH+Q I+ G+ D V N+++ MY KCG L +R+VF + RDVVS+ ++
Sbjct: 144 LENGKKIHSQ-IIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 128 AYANNGDMESAGGLFNELPLK----DKVAW------------------------------ 153
YA ++ GLF ++ + DKV +
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 154 -----TAMVT-----GYVQNAKP-------REAIEY----------------FE---RMQ 177
TA+VT G V +AK R+ + Y FE RM+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV + T + +++AC+ ++ + I+E G ++V +G+ALI MY++CG
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED---GHSSDVQIGNALISMYARCG 379
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ A +F M +R++ S++++I G+A A++L+ M KP VTF+ +L+
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439
Query: 297 ACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC+ H + G+ + ++++ R G L EA + E +
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVI 498
Query: 346 VWGALLGACQIHRNPEIA----QIAANHLFELEPDKIGNYIILS 385
W +++ H + E A Q N ELEPD I +LS
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNE--ELEPDNITFASVLS 540
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T AL + CT + ++IHAQ ++ G D+++ N +I MYVKC + + +VF E
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQ-MVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP RDV+SW LI YA G K K A + F
Sbjct: 88 MPRRDVISWNSLISCYAQQG-------------FKKK------------------AFQLF 116
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E MQ AG + +T + +++AC ++ + +G+ + V ++L+ MY
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ--RDPRVQNSLLSMYG 174
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + A ++F G+ R+V SY++M+ +A + LFG M P+ VT+I
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 294 VLTA 297
+L A
Sbjct: 235 LLDA 238
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 23/248 (9%)
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
ETD T V ++ C + ++ A + +G GP ++ + + LI+MY KC S+ D
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGP--DIFLSNLLINMYVKCRSVLD 80
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-- 298
A+++F M +R+V S++S+I +A G A QLF +M PN +T+I +LTAC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 299 -----------SHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV- 346
S + Y P + ++ + G+ G L A ++ + P V
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAG--ISPRDVVS 196
Query: 347 WGALLG--ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+ +LG A + + + + PDK+ YI L + + + M D+ R+ +L
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKV-TYINLLDAFTTPSMLDEGKRIHKLT 255
Query: 405 KMTGLKKN 412
GL +
Sbjct: 256 VEEGLNSD 263
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/562 (38%), Positives = 307/562 (54%), Gaps = 51/562 (9%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MDS + +F+++ + + ALI GY + G ++ S+ L+ + G P S TL A+
Sbjct: 263 MDS-AQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIP 321
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+ L + +HA VK + D +
Sbjct: 322 VYSPFGHELLARCLHA--------------------FVVKARL------------DADAL 349
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T L Y DMESA +F+ + K +W AM++GY QN A+ F+ MQ
Sbjct: 350 VSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELN 409
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V+ + +T+ +SACA LG + WV I NV V +ALIDMY+KCGSI +
Sbjct: 410 VQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL--NVYVMTALIDMYAKCGSIAE 467
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A IF M +NV S+++MI G+ +HG+ A++L+ DM+ P TF+ V+ ACSH
Sbjct: 468 ARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSH 527
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG-GVW 347
GL Y ++P +H CMVDLLGRAG L EAL+++ + P G GVW
Sbjct: 528 GGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVW 587
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALLGAC +H+N ++A++A+ LFEL+ + G Y++LSN+Y S + + + VR+ K
Sbjct: 588 GALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTR 647
Query: 408 GLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
L K PG + +E GDR H F AGD HP S I L L ++ GYQP + LY
Sbjct: 648 KLVKTPGCTLIEIGDRP--HVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALY 705
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +EEK+ ++ HSEKLA+AFGLL+T PG +RI+KNLR+C DCH S+V R I
Sbjct: 706 DVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLI 765
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
VVRD RFHHF+DG CSCG+YW
Sbjct: 766 VVRDASRFHHFRDGVCSCGDYW 787
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 51/364 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R VF+ V + LW L+ G L G +++ + M G + P S TL++ +A E
Sbjct: 169 RKVFDTVPSPDTILWNTLLAG--LPG--SEALEAFVRMVDAGRVRPDSTTLASSLRAAAE 224
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+++G+ +H G VKCG + E + V T
Sbjct: 225 ASHMAMGRCVH--------------------GYGVKCG-----------LAEHEHVV-TG 252
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y+ GDM+SA LF+ + D VA+ A+++GY N ++E F+ + +G +
Sbjct: 253 LMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPN 312
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TLV VI + G A + + + +V +AL +Y + ++ A I
Sbjct: 313 SSTLVAVIPVYSPFGHELLARCLHAFVVKARLDA--DALVSTALTTLYCRLNDMESARSI 370
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M ++ + S+++MI G+A +G A+ LF M + +PN +T L+AC+H+G
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430
Query: 305 CYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + + ++D+ + G + EA + ++M N W A++
Sbjct: 431 SLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWNAMISG 489
Query: 354 CQIH 357
+H
Sbjct: 490 YGLH 493
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D + + +H ++ G+ +D +V + + +Y K +RKVFD +P D + W L+
Sbjct: 129 DAAAARTLHGLSVA-AGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLL 187
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDY 185
+ EA+E F RM AG V D
Sbjct: 188 AGLPGS-----------------------------------EALEAFVRMVDAGRVRPDS 212
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL + A A+ + V G +VV G L+ +YSKCG +D A +F
Sbjct: 213 TTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTG--LMSLYSKCGDMDSAQFLF 270
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M ++ +Y+++I G++++G ++++LF ++ + +PN T + V+ S G
Sbjct: 271 DRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG 327
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 298/508 (58%), Gaps = 21/508 (4%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
L+ + +AC D Q HA+ I G T + +++ Y C L + ++ DEM
Sbjct: 23 LNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLI-TSLVSTYAHCDCLDLAHQLLDEM 81
Query: 115 PE--RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
P D+++ +I + G+ + A +F ++ +D V W +M+ G V+N + EA+ +
Sbjct: 82 PYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRF 141
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M + VE D T VI+ CA+LG +A V + N ++ SALID+Y
Sbjct: 142 FREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQL--NFILSSALIDLY 199
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
SKCG I+ A ++F ++ +V ++SMI G A+HG A AI +F M P+ +TFI
Sbjct: 200 SKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFI 259
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
G+LTACSH GL + Y + P +HY MVDLLGRAG +EEA M++ MP+
Sbjct: 260 GILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPM 319
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ +W ALL AC+ +NPE+ ++A + L G+YI+LSN+Y S WD RV
Sbjct: 320 EPDIVIWRALLSACRNFKNPELGEVAIAKISHLNS---GDYILLSNMYCSLEKWDSAERV 376
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R ++K G++KN G SW+E GVIH+F+AGD +HP + I + L L+ R + +G+ P
Sbjct: 377 REMMKRDGVRKNRGRSWVELG-GVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPA 435
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
VL DVSDEE++ L +HSEKLALA+ +L TSPG +R+ KNLR C DCH +M S+
Sbjct: 436 TDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSR 495
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ R I+VRD +RFH F+ G CSC +YW
Sbjct: 496 LLSRVIIVRDRIRFHQFEGGLCSCRDYW 523
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 102/249 (40%), Gaps = 41/249 (16%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F + VF ++ ++ W ++I G + ++++ + M + P FT +++ C
Sbjct: 106 FAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCA 165
Query: 64 EVLDVSLGQQIHAQTI----LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
LG HA+ + + + + + +I +Y KCG + ++KVF+ + DV
Sbjct: 166 R-----LGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDV 220
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
W +M+ G + +AI F +M+
Sbjct: 221 SVW-------------------------------NSMINGLAIHGLALDAIGVFSQMEME 249
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V D +T +G+++AC+ G+++ ++ + + A++D+ + G ++
Sbjct: 250 SVSPDSITFIGILTACSHCGLVEQGRRYFDLMR-RHYSIQPQLEHYGAMVDLLGRAGLVE 308
Query: 240 DAYRIFVGM 248
+AY + M
Sbjct: 309 EAYAMIKAM 317
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 5/190 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ + +W ++I G + G D+I ++ M E + P S T + AC+
Sbjct: 211 VFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGL 270
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G++ L M+ + + G + + + MP E D+V W L+
Sbjct: 271 VEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALL 330
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD-- 184
A N + E ++ + + + Y K A E M+ GV +
Sbjct: 331 SACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRG 390
Query: 185 --YVTLVGVI 192
+V L GVI
Sbjct: 391 RSWVELGGVI 400
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 318/555 (57%), Gaps = 54/555 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + K+ W +I G G ++++ + M + P SFTLS++ E
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+D+S G++IH +I G +D+YV +++I MY KC + S +VF + ERD +S
Sbjct: 253 VDISRGKEIHGCSIR-QGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS---- 307
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
W +++ G VQN E + +F +M A ++
Sbjct: 308 ---------------------------WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++ ACA L + + +GF N+ + S+L+DMY+KCG+I A +IF
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFD--ENIFIASSLVDMYAKCGNIRTAKQIF 398
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+ R++ S+++MI+G A+HG+A AI+LF M K VLTACSH GL
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVD 451
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G++P +HYA + DLLGRAG LEEA + M + P G +W LL A
Sbjct: 452 EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 511
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N ++A+ AN + E++P+ G YI+L+NIY++A W + ++ R ++ G++K P
Sbjct: 512 CRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTP 571
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + ++ F AGD +HP +I++A+ L++ ++ +GY P+ V +DV +E+K
Sbjct: 572 ACSWIEV-KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQK 630
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
K ++ +HSE+LA+ FG++ T G T+R+ KNLR+C DCH S+++GREIVVRDN R
Sbjct: 631 KYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSR 690
Query: 534 FHHFQDGKCSCGNYW 548
FHHF++G CSCG+YW
Sbjct: 691 FHHFKNGTCSCGDYW 705
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 32/370 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + + W ++IR Y G S+ + M G+ P ++ K+C ++D
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL---GCSR----KVFDEMPERDVV 120
++LG+ +H I + G DLY GN ++ MY K FL G R +VFDEM ER
Sbjct: 122 LNLGESLHGYIIRV-GLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T +++ +S +F +P KD V+W ++ G +N E + M A
Sbjct: 181 VRTVSVLSE------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 181 VETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
++ D TL V+ A+ I + C I +G ++ V S+LIDMY+KC +
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD----ADIYVASSLIDMYAKCTRV 290
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D+ R+F + +R+ S++S+I G +G ++ F M+ + KP +F ++ AC
Sbjct: 291 ADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPAC 350
Query: 299 SHVG-------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+H+ L Y D + +VD+ + G + A ++ ++M + + W
Sbjct: 351 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSW 409
Query: 348 GALLGACQIH 357
A++ C +H
Sbjct: 410 TAMIMGCALH 419
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 298/508 (58%), Gaps = 21/508 (4%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
L+ + +AC D Q HA+ I G T + +++ Y C L + ++ DEM
Sbjct: 62 LNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLI-TSLVSTYAHCDCLDLAHQLLDEM 120
Query: 115 PE--RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
P D+++ +I + G+ + A +F ++ +D V W +M+ G V+N + EA+ +
Sbjct: 121 PYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRF 180
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M + VE D T VI+ CA+LG +A V + N ++ SALID+Y
Sbjct: 181 FREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQL--NFILSSALIDLY 238
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
SKCG I+ A ++F ++ +V ++SMI G A+HG A AI +F M P+ +TFI
Sbjct: 239 SKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFI 298
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
G+LTACSH GL + Y + P +HY MVDLLGRAG +EEA M++ MP+
Sbjct: 299 GILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPM 358
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ +W ALL AC+ +NPE+ ++A + L G+YI+LSN+Y S WD RV
Sbjct: 359 EPDIVIWRALLSACRNFKNPELGEVAIAKISHLNS---GDYILLSNMYCSLEKWDSAERV 415
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R ++K G++KN G SW+E GVIH+F+AGD +HP + I + L L+ R + +G+ P
Sbjct: 416 REMMKRDGVRKNRGRSWVELG-GVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPA 474
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
VL DVSDEE++ L +HSEKLALA+ +L TSPG +R+ KNLR C DCH +M S+
Sbjct: 475 TDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSR 534
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ R I+VRD +RFH F+ G CSC +YW
Sbjct: 535 LLSRVIIVRDRIRFHQFEGGLCSCRDYW 562
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 102/249 (40%), Gaps = 41/249 (16%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F + VF ++ ++ W ++I G + ++++ + M + P FT +++ C
Sbjct: 145 FAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCA 204
Query: 64 EVLDVSLGQQIHAQTI----LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
LG HA+ + + + + + +I +Y KCG + ++KVF+ + DV
Sbjct: 205 R-----LGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDV 259
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
W +M+ G + +AI F +M+
Sbjct: 260 SVW-------------------------------NSMINGLAIHGLALDAIGVFSQMEME 288
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V D +T +G+++AC+ G+++ ++ + + A++D+ + G ++
Sbjct: 289 SVSPDSITFIGILTACSHCGLVEQGRRYFDLMR-RHYSIQPQLEHYGAMVDLLGRAGLVE 347
Query: 240 DAYRIFVGM 248
+AY + M
Sbjct: 348 EAYAMIKAM 356
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 5/190 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ + +W ++I G + G D+I ++ M E + P S T + AC+
Sbjct: 250 VFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGL 309
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G++ L M+ + + G + + + MP E D+V W L+
Sbjct: 310 VEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALL 369
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD-- 184
A N + E ++ + + + Y K A E M+ GV +
Sbjct: 370 SACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRG 429
Query: 185 --YVTLVGVI 192
+V L GVI
Sbjct: 430 RSWVELGGVI 439
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 312/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N FLW LIR Y +G + ++ LY M G+ P +FT + KAC +
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAAL 176
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD+ G+++H Q + + D++V ++ MY KCG + +R V
Sbjct: 177 LDLETGREVH-QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAV--------------- 220
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ + ++D V W +M+ Y QN +P EA+ M G+
Sbjct: 221 ----------------FDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTI 264
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLV +SA A + + GFG + + ++L+DMY+K G + A +F
Sbjct: 265 ATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKL--KTSLVDMYAKSGWVQVARVLF 322
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGL- 303
+ +R + S+++MI G+ MHG A A+ LF M + P+ +TF+GVL+AC+H G+
Sbjct: 323 EQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMV 382
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P+ HY C++D+LG G EEA +++ M +EP+ G+WGALL
Sbjct: 383 EEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLN 442
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N E+ ++A L ELEP+ GNY+ LSNIYA +G W+ +RVR+L+ GLKK
Sbjct: 443 GCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKI 502
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
SW+E +G H F GD +HP S EI L L + GY P++ V ++V D+E
Sbjct: 503 LACSWIE-LKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDE 561
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ ++ +HSE+LA+AFGL++T PG + + KNLR+CEDCH+ + SQ++ REI++RD
Sbjct: 562 KRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVN 621
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF +G+CSC +YW
Sbjct: 622 RYHHFVNGECSCKDYW 637
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 34/236 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+++ ++C + G+Q+H + +L+ G D + ++ +Y CG +G +R+
Sbjct: 66 TSILQSCVASGSLRAGRQLHGR-LLVSGLGPDTVLSTKLVDLYAACGQVGHARR------ 118
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
LF+ +P ++ W ++ Y + A+ +
Sbjct: 119 -------------------------LFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRG 153
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M GVE D T V+ ACA L ++ V + G+ +G +V V + ++DMY+KC
Sbjct: 154 MVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWG--QDVFVCAGVVDMYAKC 211
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
G +DDA +F G+ R+ ++SMI + +GR A+ L DM P T
Sbjct: 212 GCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATL 267
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 158 TGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG 217
TG+ + P +A Y ++ +C G ++ + SG G
Sbjct: 40 TGFAASPPPPSTNPRLASSPHA-----YHHHTSILQSCVASGSLRAGRQLHGRLLVSGLG 94
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P + V+ + L+D+Y+ CG + A R+F GM +RNVF ++ +I +A G AA++L+
Sbjct: 95 P--DTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYR 152
Query: 278 DMVKTETKPNGVTFIGVLTACS---------HVGLKCYGVSPSTDHYAC--MVDLLGRAG 326
MV+ +P+ T+ VL AC+ V + G D + C +VD+ + G
Sbjct: 153 GMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCG 212
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGA 353
C+++A + + + V + VW +++ A
Sbjct: 213 CVDDARAVFDGIAVR-DAVVWNSMIAA 238
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 314/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++ + +I GY G K + L+ ++ F + + +
Sbjct: 265 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 324
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD +G+QIHAQTI+ S++ VGN+++ MY KCG
Sbjct: 325 LDWEMGRQIHAQTIVTTA-DSEILVGNSLVDMYAKCG----------------------- 360
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
E A +F L + V WTAM++ YVQ E ++ F +M+ A V D
Sbjct: 361 --------KFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 412
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T ++ A A + + + SGF ++NV GSAL+D+Y+KCGSI DA + F
Sbjct: 413 ATFASLLRASASIASLSLGKQLHSFIIKSGF--MSNVFSGSALLDVYAKCGSIKDAVQTF 470
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M RN+ S+++MI +A +G A A ++ F +MV + +P+ V+F+GVL+ACSH GL
Sbjct: 471 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 530
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +HYA +VD+L R+G EA K++ +MP++P+ +W ++L A
Sbjct: 531 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590
Query: 354 CQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N E+A+ AA+ LF +E + Y+ +SNIYA+AG W++VS+V + ++ G+KK
Sbjct: 591 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 650
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
P YSW+E + H F A D HP EI++ + L ++ GY+P+ L++ ++
Sbjct: 651 PAYSWVEI-KHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKF 709
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HSE+LA+AF L++T G+ + +MKNLR C DCH + S+++GREI VRD+
Sbjct: 710 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDST 769
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 770 RFHHFRDGFCSCGDFW 785
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 189/446 (42%), Gaps = 66/446 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + + WT LI GY K++ L+ M+R G P T L C
Sbjct: 98 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ Q+ Q I LG + S L VGNT++ Y K L + ++F EMPE D ++ +
Sbjct: 158 EMGNQITQVQTQIIKLG-YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAV 216
Query: 126 IVA-----------------------------------YANNGDMESAGGLFNELPLKDK 150
+ A Y+ + + A LF+E+P +D
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 276
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA-----QLGVIKYAN 205
V++ +++GY + K + A + F +Q+ + ++S + ++G +A
Sbjct: 277 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 336
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ A+ + ++VG++L+DMY+KCG ++A IF + R+ +++MI +
Sbjct: 337 TIVTTAD-------SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDH 314
G +QLF M + + TF +L A + H + G +
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE--IAQIAANHLFE 372
+ ++D+ + G +++A++ ++MP + N W A++ A + E + L
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG 508
Query: 373 LEPDKIGNYIILSNIYASA----GMW 394
L+PD + +LS S G+W
Sbjct: 509 LQPDSVSFLGVLSACSHSGLVEEGLW 534
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 9/210 (4%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
+L++L + L +++ I A+ I+ GF D N +G ++K G L +R++F++
Sbjct: 14 SLTSLASLQSPKLRLNVVNNIDAR-IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEK 72
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP ++ VS +I Y +G++ A LF+ + + V WT ++ GY Q + +EA E F
Sbjct: 73 MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 132
Query: 174 ERMQYAGVETDYVTLVGVISACA--QLGVIKYANWVCEI-AEGSGFGPINNVVVGSALID 230
+MQ G E DYVT V ++S C ++G N + ++ + G + ++VG+ L+D
Sbjct: 133 VQMQRCGTEPDYVTFVTLLSGCNGHEMG-----NQITQVQTQIIKLGYDSRLIVGNTLVD 187
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
Y K +D A ++F M + + F++++++
Sbjct: 188 SYCKSNRLDLACQLFKEMPEIDSFTFAAVL 217
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P N V + +I Y K G++ +A ++F GM +R +++ +I G++ + A +LF
Sbjct: 74 PHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFV 133
Query: 278 DMVKTETKPNGVTFIGVLTACS 299
M + T+P+ VTF+ +L+ C+
Sbjct: 134 QMQRCGTEPDYVTFVTLLSGCN 155
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 306/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W +I GY +++ L+ M REG FTLS+ AC
Sbjct: 111 RRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAK 170
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +Q+H I L S +VG + +Y KC +
Sbjct: 171 YAIIECKQLHTIAIKLA-LDSSSFVGTAFLDVYAKCNMI--------------------- 208
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A +F +P K V W+++ G+VQN E + F+ Q G++
Sbjct: 209 ----------KDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTE 258
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ ++S CA L +I V + GF N+ V ++L+D+Y+KCG I+ +Y +F
Sbjct: 259 FTVSSILSTCASLALIIEGTQVHAVIVKHGFH--RNLFVATSLVDVYAKCGQIEKSYEVF 316
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M+++NV +++MI F+ H + A+ LF M + PN VT++ +L+ACSH GL
Sbjct: 317 ADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVE 376
Query: 306 YG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G P+ HY+CMVD+LGR+G +EA K+++KMP EP +WG+LLG+
Sbjct: 377 EGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGS 436
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
+IH+N +A+IAA LF LEP+ GN+++LSN+YA++G W++V R+ L+ +G KK
Sbjct: 437 SRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEM 496
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH F AG+ HP T++ L ++ ++ ++ N + L+DV ++K
Sbjct: 497 GRSWIEA-KGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQK 555
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA AFGL++ P + I KNLRIC DCH FM S + R+++VRD R
Sbjct: 556 EELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINR 615
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG++W
Sbjct: 616 FHHFKDGSCSCGDFW 630
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 145/352 (41%), Gaps = 60/352 (17%)
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
FTL L + C + + +G+ H I G +D N +I +Y KCG C+R+VFD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFG-LVTDTVTCNILINLYTKCGQNDCARRVFD 115
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
M R ++SW +I GY N + EA++
Sbjct: 116 AMSVRSIISWNTMI-------------------------------AGYTHNREDVEALKL 144
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE--GSGFGPINNVVVGSALID 230
F RM G + TL + ACA KYA C+ ++ VG+A +D
Sbjct: 145 FSRMHREGTQMTEFTLSSTLCACAA----KYAIIECKQLHTIAIKLALDSSSFVGTAFLD 200
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
+Y+KC I DA +F M ++ ++SS+ GF +G + LF + + T
Sbjct: 201 VYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFT 260
Query: 291 FIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
+L+ C+ H + +G + +VD+ + G +E++ ++ M
Sbjct: 261 VSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME 320
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILS 385
E N +W A++ + H + A I LFE + P+++ ILS
Sbjct: 321 -EKNVVLWNAMIASFSRHAHSWEAMI----LFEKMQQVGIFPNEVTYLSILS 367
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 314/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ K W ALI + G S+ L+ M G+ P FT+ +L AC +
Sbjct: 458 VFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKF 517
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IH +L G D ++G +++ +Y++C + + +FD+M + +V W
Sbjct: 518 LRCGKEIHG-FMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCW----- 571
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M+TG+ QN P EA++ F +M G++ +
Sbjct: 572 --------------------------NVMITGFSQNELPCEALDTFRQMLSGGIKPQEIA 605
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ GV+ AC+Q+ ++ V A + + V ALIDMY+KCG ++ + IF
Sbjct: 606 VTGVLGACSQVSALRLGKEVHSFALKAHLS--EDAFVTCALIDMYAKCGCMEQSQNIFDR 663
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +++ ++ +I G+ +HG AI+LF M +P+ TF+GVL AC+H GL
Sbjct: 664 VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YGV P +HYAC+VD+LGRAG L EALK+V +MP EP+ G+W +LL +C+
Sbjct: 724 LKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCR 783
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ + EI + + L ELEP+K NY++LSN+YA G WD+V +VR+ +K GL K+ G
Sbjct: 784 NYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGC 843
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E G+++ F D + S +IQQ L ++ GY+P+ VL+++ +E K +
Sbjct: 844 SWIEIG-GMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIK 902
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL +HSEKLA++FGLL T+ G T+R+ KNLRIC DCH + S+V+ R+I+VRDN RFH
Sbjct: 903 ILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFH 962
Query: 536 HFQDGKCSCGNYW 548
HF++G C+CG++W
Sbjct: 963 HFKNGLCTCGDFW 975
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 33/299 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKA 61
S R VF+ K K+ FL+ AL+ GY +D+ISL+ + + P +FTL + KA
Sbjct: 145 SDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKA 204
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C V DV LG+ +HA + GGF SD +VGN +I MY KCGF+ + KVF+ M R++VS
Sbjct: 205 CAGVADVELGEAVHALALKAGGF-SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVS 263
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W ++ A + NG G+F L + ++ G+
Sbjct: 264 WNSVMYACSENGGFGECCGVFKRLLISEE----------------------------EGL 295
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T+V VI ACA +G ++ V +A G V V ++L+DMYSKCG + +A
Sbjct: 296 VPDVATMVTVIPACAAVGEVRMGMVVHGLA--FKLGITEEVTVNNSLVDMYSKCGYLGEA 353
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS 299
+F +NV S++++I G++ G +L +M + E + N VT + VL ACS
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 165/390 (42%), Gaps = 59/390 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
R +F+ KN W +I GY +G + L M+RE V+ T+ + AC+
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSG 413
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ ++IH GF D V N + Y KC L C+ +VF M + V SW
Sbjct: 414 EHQLLSLKEIHGYA-FRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNA 472
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LI A+A QN P ++++ F M +G++ D
Sbjct: 473 LIGAHA-------------------------------QNGFPGKSLDLFLVMMDSGMDPD 501
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV----VVGSALIDMYSKCGSIDD 240
T+ ++ ACA+L ++ E GF N + +G +L+ +Y +C S+
Sbjct: 502 RFTIGSLLLACARLKFLRCGK------EIHGFMLRNGLELDEFIGISLMSLYIQCSSMLL 555
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
IF M+ +++ ++ MI GF+ + A+ F M+ KP + GVL ACS
Sbjct: 556 GKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615
Query: 301 VGLKCYG---------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
V G S D + ++D+ + GC+E++ + +++ E + VW
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNV 674
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIG 379
++ IH + + A LFEL +K G
Sbjct: 675 IIAGYGIHGHG----LKAIELFELMQNKGG 700
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 58/343 (16%)
Query: 30 QGHLKDSISLYCSMRREGIGPVS----FTLSALFKACTEVLDVSLGQQIHAQTILLGGFT 85
G+L D+++L S + G S + L +AC ++ +G+++HA
Sbjct: 66 SGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHA--------- 116
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
+ S K+ DVV T +I Y+ G + G+F+
Sbjct: 117 -----------------LVSASHKL-----RNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
KD + A+++GY +NA R+AI F E + + D TL V ACA + ++
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
V +A +G ++ VG+ALI MY KCG ++ A ++F M+ RN+ S++S++ +
Sbjct: 215 EAVHALALKAG--GFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACS 272
Query: 265 MHGRAHAAIQLFGDMVKTETK---PNGVTFIGVLTACSHVG------------LKCYGVS 309
+G +F ++ +E + P+ T + V+ AC+ VG K G++
Sbjct: 273 ENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK-LGIT 331
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVE----KMPVEPNGGVWG 348
+VD+ + G L EA + + K V N +WG
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWG 374
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 35/240 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+F++++ K+ W +I G+ +++ + M GI P ++ + AC++V
Sbjct: 557 KLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQV 616
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+++H+ L + D +V +I MY KCG + S+ +FD + E+D
Sbjct: 617 SALRLGKEVHSFA-LKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKD------- 668
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ W ++ GY + +AIE FE MQ G D
Sbjct: 669 ------------------------EAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDS 704
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T +GV+ AC G++ ++ ++ G P + + ++DM + G + +A ++
Sbjct: 705 FTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKP--KLEHYACVVDMLGRAGQLTEALKL 762
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N+VV+ + +I MYS CGS D+ +F K++++F Y++++ G++ + AI LF ++
Sbjct: 126 NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185
Query: 280 VK-TETKPNGVTFIGVLTACSHV------------GLKCYGVSPSTDHYACMVDLLGRAG 326
+ T+ P+ T V AC+ V LK G S + A ++ + G+ G
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNA-LIAMYGKCG 244
Query: 327 CLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+E A+K+ E M N W +++ AC
Sbjct: 245 FVESAVKVFETMR-NRNLVSWNSVMYACS 272
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 308/584 (52%), Gaps = 88/584 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R+VF+ + N F+W +I+GY G ++S+YC M G+ P +T L K T
Sbjct: 71 YARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFT 130
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G+++H + LG F+S+++V N +I +Y G + +R VFD + DVV+W
Sbjct: 131 RDTAVKCGRELHDHIVKLG-FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWN 189
Query: 124 ELIVAYANNGDMESAGGLFNEL-------------------------------------- 145
+I Y + + + LF+E+
Sbjct: 190 VMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRNYFDK 249
Query: 146 -PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
P +D V+WTAM+ GY+Q + +E + F MQ A ++ D T+V +++ACA LG ++
Sbjct: 250 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 309
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
W+ + + + VG+ALIDMY CG+++ A RIF M R+ S++++I G A
Sbjct: 310 EWIKAYIDKNEIKI--DSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLA 367
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGR 324
++G A+ +F M+K P+ V
Sbjct: 368 INGYGEEALDMFSQMLKASITPDEV----------------------------------- 392
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIIL 384
++ MPV+PN VWG+LLGAC++HR+ E+A++AA + ELEP+ Y++L
Sbjct: 393 ----------IKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLL 442
Query: 385 SNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQA 444
NIYA+ W+ + VR+L+ G+KK PG S +E + G +HEF AGD HP S EI
Sbjct: 443 CNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMN-GSVHEFVAGDQVHPQSKEIYSK 501
Query: 445 LGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKN 504
L ++ L+ GY P+ V D+ +EEK+ + HSEKLA+AFGL+++ PG T+RI+KN
Sbjct: 502 LDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKN 561
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
LR+C DCH S+V RE++VRD RFHHF+ G CSC +YW
Sbjct: 562 LRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 605
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GDME A +F+ +P + W M+ GY + P A+ + M GV D T ++
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ +K + + GF +NV V +ALI +YS G + A +F + +
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFS--SNVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKC-- 305
V +++ MI G+ + +++LF +M + P+ +T + VL+ACS +VG +
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 306 --YGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLGAC 354
+ P D + M+D + +E L + +M ++P+ ++L AC
Sbjct: 245 NYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTAC 300
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 304/515 (59%), Gaps = 37/515 (7%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P F SAL KAC + + G+Q+H I+ + +D V ++++ MY KCG L ++
Sbjct: 40 PDDFVFSALVKACANLGSIDHGRQVHCHFIV-SEYANDEVVKSSLVDMYAKCGLLNSAKA 98
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD + ++ +SWT ++ YA +G E A LF LP+K+ +WTA+++G+VQ+ K EA
Sbjct: 99 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 158
Query: 170 IEYFERMQYAGVET-DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
F M+ V+ D + L ++ ACA L IA V G+AL
Sbjct: 159 FSVFTEMRRERVDILDPLVLSSIVGACANLA--------ASIA--------GRQVHGNAL 202
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
IDMY+KC + A IF M+ R+V S++S+I+G A HG+A A+ L+ DMV KPN
Sbjct: 203 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 262
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
VTF+G++ ACSHVG K YG+ PS HY C++DLLGR+G L+EA ++
Sbjct: 263 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 322
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL---FELEPDKIGNYIILSNIYASAGM 393
MP P+ W ALL AC+ ++ A+HL F+L+ YI+LSNIYASA +
Sbjct: 323 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK--DPSTYILLSNIYASASL 380
Query: 394 WDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ 453
W VS RR L ++K+PG+S +E R F AG+ +HP +I + L L + ++
Sbjct: 381 WGKVSEARRKLGEMEVRKDPGHSSVEV-RKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 439
Query: 454 -ADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
+GY P+ +L+D+ ++EK+++L HSE+ A+A+GLL PG +RI+KNLR+C DCH
Sbjct: 440 IRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCH 499
Query: 513 LFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+ + S++ REI+VRD R+HHF+ GKCSC ++
Sbjct: 500 VVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 534
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 49/287 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
+F + KN + WTALI G++ G ++ S++ MRRE + + LS++ AC +
Sbjct: 130 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 189
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
G+Q+H GN +I MY KC + ++ +F M RDVVSWT LI
Sbjct: 190 ASIAGRQVH---------------GNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 234
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V A +G E A L+++ M GV+ + V
Sbjct: 235 VGMAQHGQAEKALALYDD-------------------------------MVSHGVKPNEV 263
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T VG+I AC+ +G ++ + + + +G ++ + L+D+ + G +D+A +
Sbjct: 264 TFVGLIYACSHVGFVEKGRELFQ-SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 322
Query: 247 GMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M + ++++++ GR I++ +V + + T+I
Sbjct: 323 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 38/166 (22%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MP RD ++W ++ A N+ L K G +P
Sbjct: 1 MPHRDHIAWASVLTA-------------LNQANLSGKTLSVFSSVGSSSGLRP------- 40
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CE--IAEGSGFGPINNVVVGSALID 230
D ++ ACA LG I + V C ++E + N+ VV S+L+D
Sbjct: 41 ----------DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA-----NDEVVKSSLVD 85
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
MY+KCG ++ A +F ++ +N S+++M+ G+A GR A++LF
Sbjct: 86 MYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 131
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/516 (37%), Positives = 304/516 (58%), Gaps = 48/516 (9%)
Query: 46 EGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLG 105
+ + P T+ +L AC ++ ++ G+ +H+ + LG +L V N ++ MY KC
Sbjct: 5 DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELG-LDENLSVNNAILDMYCKCD--- 60
Query: 106 CSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAK 165
D+ESA +FN + KD ++WT+M++G ++
Sbjct: 61 ----------------------------DIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 92
Query: 166 PREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
+E++ F +MQ +E D +TLVGV+SACAQ G + ++ + + F ++V+
Sbjct: 93 FQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDK--FEINCDLVLE 150
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+AL+DMY+KCGSID A ++F M+ RNVF++++MI G AMHG AI LF M +
Sbjct: 151 TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLM 210
Query: 286 PNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALK 333
P+ VTFI +L ACSH GL + + P +HY C+VDLL RA +++AL
Sbjct: 211 PDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALA 270
Query: 334 MVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
+E MP++ N +W LLGAC+ + ++A+ + ELEPD G Y++LSN+YA
Sbjct: 271 FIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQ 330
Query: 394 WDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ 453
WD ++R+ +K G++K PG SW+E + G+IH+F AGD +H + +I + ++ R+
Sbjct: 331 WDHALKLRKQMKNKGIEKTPGCSWIELN-GMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 389
Query: 454 ADG-YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
DG + P +VL+D+ +EEK+ L HSEKLA+A GL++T G+ +RI+KNLR+C DCH
Sbjct: 390 LDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCH 449
Query: 513 LFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
F+ S+V REIV RD RFHHF++G CSC ++W
Sbjct: 450 SFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ K+ WT+++ G G+ ++S++L+ M+ I P TL + AC +
Sbjct: 68 VFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGA 127
Query: 68 VSLGQQIHAQTILLGGF--TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ IH +L+ F DL + ++ MY KCG + + +VF M R+V +W +
Sbjct: 128 LDQGKYIH---LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAM 184
Query: 126 IVAYANNGDMESAGGLFNELP----LKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
I A +G E A LF+++ + D V + A++ E + F+ M+
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 240
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 327/564 (57%), Gaps = 58/564 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ + VF ++ K W ALI G+ + S+ + M+ G+ P SFT+ +L AC
Sbjct: 197 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 256
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG+++H I+ DL+V +++ +Y+ C
Sbjct: 257 SKLKSLRLGKEVHG-FIIRNWLERDLFVYLSVLSLYIHC--------------------- 294
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
G++ + LF+ + K V+W ++TGY+QN P A+ F +M G++
Sbjct: 295 ----------GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344
Query: 183 TDYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++++ V AC+ +LG +A + + E F + +LIDMY+K GS
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF-------IACSLIDMYAKNGS 397
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I + ++F G+K+++ S+++MI+G+ +HG A AI+LF +M +T P+ +TF+GVLTA
Sbjct: 398 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 457
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMV-EKMPVEPNG 344
C+H GL +G+ P+ HYAC++D+LGRAG L++AL++V E+M E +
Sbjct: 458 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 517
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
G+W +LL +C+IH+N E+ + A LFELEP+K NY++LSN+YA G W+DV +VR+ +
Sbjct: 518 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 577
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
L+K+ G SW+E +R V F G+ EI+ L ++ GY+P+ SV
Sbjct: 578 NEMSLRKDAGCSWIELNRKVF-SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 636
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+D+S+EEK L HSEKLAL +GL+ TS G T+R+ KNLRIC DCH S+V+ R
Sbjct: 637 QHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 696
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EIVVRDN RFHHF++G CSCG+YW
Sbjct: 697 EIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACTEVLDVSL 70
+N W ++IR + G ++S L M E P TL + C ++ L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +H + L +L + N ++ MY KCG ++ ++I
Sbjct: 61 GKGVHGWAVKLR-LDKELVLNNALMDMYSKCG----------------CITNAQMIFKMN 103
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--VETDYVTL 188
NN K+ V+W MV G+ + +M G V+ D VT+
Sbjct: 104 NN---------------KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 148
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+ + C + + + F + N +V +A + Y+KCGS+ A R+F G+
Sbjct: 149 LNAVPVCFHESFLPSLKELHCYSLKQEF--VYNELVANAFVASYAKCGSLSYAQRVFHGI 206
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+ + V S++++I G A ++ M + P+ T +L+ACS +
Sbjct: 207 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 259
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 154/369 (41%), Gaps = 56/369 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACT 63
+++F+ KN W ++ G+ +G + + M E + T+ C
Sbjct: 97 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 156
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +++H + L F + V N + Y KCG L +++VF + + V SW
Sbjct: 157 HESFLPSLKELHCYS-LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW- 214
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
A++ G+ Q+ PR +++ +M+ +G+
Sbjct: 215 ------------------------------NALIGGHAQSNDPRLSLDAHLQMKISGLLP 244
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSID 239
D T+ ++SAC++L ++ E GF N ++ V +++ +Y CG +
Sbjct: 245 DSFTVCSLLSACSKLKSLRLGK------EVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+F M+ +++ S++++I G+ +G A+ +F MV + G++ + V ACS
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Query: 300 -----HVGLKCYGVS-----PSTDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+G + + + AC ++D+ + G + ++ K+ + E + W
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWN 417
Query: 349 ALLGACQIH 357
A++ IH
Sbjct: 418 AMIMGYGIH 426
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 28/237 (11%)
Query: 148 KDKVAWTAMVTGYVQNAKPREAI----EYFERMQYAGVETDYVTLVGVISACA---QLGV 200
++ V+W +M+ + N E+ E E D TLV V+ CA ++G+
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 201 IKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
K + W ++ +V+ +AL+DMYSKCG I +A IF +NV S+++M
Sbjct: 61 GKGVHGWAVKLRLDK------ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 114
Query: 260 ILGFAMHGRAHAAIQLFGDMVK--TETKPNGVTFIGVLTACSHVG-------LKCYGVSP 310
+ GF+ G H + M+ + K + VT + + C H L CY +
Sbjct: 115 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 174
Query: 311 STDHYACMVDLL----GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
+ + + + G L A ++ + + W AL+G +P ++
Sbjct: 175 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS-WNALIGGHAQSNDPRLS 230
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 307/553 (55%), Gaps = 61/553 (11%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ W+A+I+G G K++I + M+ EG+ + ++ AC + ++ G+QI
Sbjct: 230 KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQI 289
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HA I+ +YVG+ +I MY KC L ++ VFD M +++VVS
Sbjct: 290 HA-CIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS------------- 335
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
WTAMV GY Q + EA++ F MQ +G++ D+ TL ISA
Sbjct: 336 ------------------WTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISA 377
Query: 195 CAQLGVIKYANWVCEIAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
CA + + EGS F G I+ + V ++L+ +Y KCG IDD+ R+F
Sbjct: 378 CAN---------ISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNE 428
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+ S+++M+ +A GRA AIQLF MV+ KP+GVT GV++ACS GL
Sbjct: 429 MNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKG 488
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YG+ PS HY+CM+DL R+G +EEA+ + MP P+ W LL AC+
Sbjct: 489 QRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR 548
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
N EI + AA L EL+P Y +LS+IYAS G WD V+++RR +K ++K PG
Sbjct: 549 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQ 608
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ +G +H F A D + P S +I L +L ++ +GY+P+ V +DV + K +
Sbjct: 609 SWIKW-KGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIK 667
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LA+AFGL+ G +R+ KNLR+C DCH S V GREI+VRD +RFH
Sbjct: 668 MLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFH 727
Query: 536 HFQDGKCSCGNYW 548
F+DG CSCG++W
Sbjct: 728 RFKDGTCSCGDFW 740
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 201/387 (51%), Gaps = 23/387 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTEVL 66
FE++ ++ W LI GY L G + ++ Y +M ++ ++ TL + K +
Sbjct: 91 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNG 150
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
VSLG+QIH Q I L GF S L VG+ ++ MY K G + ++KVF + +R+ V + L+
Sbjct: 151 HVSLGKQIHGQVIKL-GFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLM 209
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G +E A LF + KD V+W+AM+ G QN +EAIE F M+ G++ D
Sbjct: 210 GGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQY 268
Query: 187 TLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+ AC LG I + C I +++ VGSALIDMY KC + A +
Sbjct: 269 PFGSVLPACGGLGAINDGRQIHACIIRTNLQ----DHIYVGSALIDMYCKCKCLHYAKTV 324
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV--- 301
F MKQ+NV S+++M++G+ GRA A+++F DM ++ P+ T ++AC+++
Sbjct: 325 FDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSL 384
Query: 302 --GLKCYG--VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + +G ++ HY +V L G+ G ++++ ++ +M V W A++ A
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVS-WTAMVSA 443
Query: 354 -CQIHRNPEIAQIAANHL-FELEPDKI 378
Q R E Q+ + L+PD +
Sbjct: 444 YAQFGRAVEAIQLFDKMVQLGLKPDGV 470
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 35/249 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ + VF+++K KN WTA++ GY G +++ ++ M+R GI P +TL AC
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G Q H + I G + V N+++ +Y KCG + S ++F+EM RD VSWT
Sbjct: 380 NISSLEEGSQFHGKAI-TAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWT 438
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++ AYA Q + EAI+ F++M G++
Sbjct: 439 AMVSAYA-------------------------------QFGRAVEAIQLFDKMVQLGLKP 467
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAY 242
D VTL GVISAC++ G+++ E+ G P N S +ID++S+ G I++A
Sbjct: 468 DGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHY--SCMIDLFSRSGRIEEAM 525
Query: 243 RIFVGMKQR 251
GM R
Sbjct: 526 GFINGMPFR 534
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 46/302 (15%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R+VFD +P+ ++ SW L++AY+ +G + F +LP +D V W ++ GY +
Sbjct: 57 ARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLV 116
Query: 167 REAIE-YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG 225
A++ Y M+ VTL+ ++ + G + + GF + ++VG
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE--SYLLVG 174
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNV------------------------------FS 255
S L+DMYSK G I DA ++F G+ RN S
Sbjct: 175 SPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVS 234
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--------KCYG 307
+S+MI G A +G AI+ F +M K + F VL AC +G C
Sbjct: 235 WSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACII 294
Query: 308 VSPSTDHY---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL-LGACQIHRNPEIA 363
+ DH + ++D+ + CL A + ++M + N W A+ +G Q R E
Sbjct: 295 RTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAGEAV 353
Query: 364 QI 365
+I
Sbjct: 354 KI 355
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 318/559 (56%), Gaps = 48/559 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ R +F+ + + ++ ++ RGY + + +L+ + + + P ++T +L KAC
Sbjct: 82 SYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKAC 141
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ G+Q+H ++ LG ++YV T+I MY +C + +R VFD + E VV +
Sbjct: 142 AVAKALEEGRQLHCLSMKLG-VDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCY 200
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I YA +P EA+ F MQ ++
Sbjct: 201 NAMITGYARRN-------------------------------RPNEALSLFREMQGKNLK 229
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +TL+ V+S+CA LG + W+ E A+ GF V V +ALIDM++KCGS+DDA
Sbjct: 230 PNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGF--CKYVKVNTALIDMFAKCGSLDDAV 287
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M+ ++ ++S+MI+ +A HG+A ++ +F M +P+ +TF+G+L ACSH G
Sbjct: 288 SIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTG 347
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L +G+ PS HY MVDLLGRAG LE+A + ++K+P+ P +W L
Sbjct: 348 LVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRIL 407
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L AC H N E+A+ + + EL+ G+Y+ILSN+YA W+ V +R+++K
Sbjct: 408 LAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAV 467
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY-DVS 469
K PG S +E + V+HEF +GD +T++ +AL +++ L+ GY P+ V++ D+
Sbjct: 468 KVPGCSSIEVN-NVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHADMG 526
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
D+EK+ L HSEKLA+AFGLL T PG T+R++KNLR+C DCH S + GR++V+R
Sbjct: 527 DQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLR 586
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+DGKCSC ++W
Sbjct: 587 DVQRFHHFEDGKCSCRDFW 605
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 20/297 (6%)
Query: 116 ERDVVSWTELI---VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ DV T+LI M A LF+ + D V + ++ GY ++ P E
Sbjct: 59 QEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNL 118
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F + + D T ++ ACA ++ + ++ G +NV V LI+MY
Sbjct: 119 FVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVD--DNVYVCPTLINMY 176
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
++C +D A +F + + V Y++MI G+A R + A+ LF +M KPN +T +
Sbjct: 177 TECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLL 236
Query: 293 GVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL++C+ +G K +G ++D+ + G L++A+ + E M +
Sbjct: 237 SVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK 296
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLF--ELEPDKIGNYIILSNIYASAGMWDD 396
+ W A++ A H E + + + ++PD+I ++ L N + G+ ++
Sbjct: 297 -DTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI-TFLGLLNACSHTGLVEE 351
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 327/564 (57%), Gaps = 58/564 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ + VF ++ K W ALI G+ + S+ + M+ G+ P SFT+ +L AC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG+++H I+ DL+V +++ +Y+ C
Sbjct: 507 SKLKSLRLGKEVHG-FIIRNWLERDLFVYLSVLSLYIHC--------------------- 544
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
G++ + LF+ + K V+W ++TGY+QN P A+ F +M G++
Sbjct: 545 ----------GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 183 TDYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++++ V AC+ +LG +A + + E F + +LIDMY+K GS
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF-------IACSLIDMYAKNGS 647
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I + ++F G+K+++ S+++MI+G+ +HG A AI+LF +M +T P+ +TF+GVLTA
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMV-EKMPVEPNG 344
C+H GL +G+ P+ HYAC++D+LGRAG L++AL++V E+M E +
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
G+W +LL +C+IH+N E+ + A LFELEP+K NY++LSN+YA G W+DV +VR+ +
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
L+K+ G SW+E +R V F G+ EI+ L ++ GY+P+ SV
Sbjct: 828 NEMSLRKDAGCSWIELNRKVF-SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 886
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+D+S+EEK L HSEKLAL +GL+ TS G T+R+ KNLRIC DCH S+V+ R
Sbjct: 887 QHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 946
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
EIVVRDN RFHHF++G CSCG+YW
Sbjct: 947 EIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 154/380 (40%), Gaps = 61/380 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R VF+ ++ KN F W A+I Y + + + M + P FT + KAC
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV +G +H ++ G D++VGN ++ Y GF+
Sbjct: 200 MSDVGIGLAVHG-LVVKTGLVEDVFVGNALVSFYGTHGFV-------------------- 238
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI----EYFERMQYAG 180
A LF+ +P ++ V+W +M+ + N E+ E E
Sbjct: 239 -----------TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 181 VETDYVTLVGVISACA---QLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
D TLV V+ CA ++G+ K + W ++ +V+ +AL+DMYSKCG
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD------KELVLNNALMDMYSKCG 341
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK--TETKPNGVTFIGV 294
I +A IF +NV S+++M+ GF+ G H + M+ + K + VT +
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 295 LTACSHVG-------LKCYGVSPSTDHYACMVDLL----GRAGCLEEALKMVEKMPVEPN 343
+ C H L CY + + + + + G L A ++ + +
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 344 GGVWGALLGACQIHRNPEIA 363
W AL+G +P ++
Sbjct: 462 NS-WNALIGGHAQSNDPRLS 480
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 48/314 (15%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
L L +A + D+ +G++IH +D + +I MY CG SR VFD
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+ +++ W +I +Y+ N L D+V T +
Sbjct: 146 LRSKNLFQWNAVISSYSRN-------------ELYDEVLET-----------------FI 175
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
E + + D+ T VI ACA + + V + +G + +V VG+AL+ Y
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL--VEDVFVGNALVSFYG 233
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK----PNGV 289
G + DA ++F M +RN+ S++SMI F+ +G + + L G+M++ P+
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 290 TFIGVLTACSH-------VGLKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKM 338
T + VL C+ G+ + V D ++D+ + GC+ A +M+ KM
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKM 352
Query: 339 PVEPNGGVWGALLG 352
N W ++G
Sbjct: 353 NNNKNVVSWNTMVG 366
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 40/300 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACT 63
+F+ + +N W ++IR + G ++S L M E P TL + C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ LG+ +H + L +L + N ++ MY KCG ++
Sbjct: 304 REREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSKCG----------------CITNA 346
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--V 181
++I NN K+ V+W MV G+ + +M G V
Sbjct: 347 QMIFKMNNN---------------KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D VT++ + C + + + F + N +V +A + Y+KCGS+ A
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF--VYNELVANAFVASYAKCGSLSYA 449
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F G++ + V S++++I G A ++ M + P+ T +L+ACS +
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 301/543 (55%), Gaps = 56/543 (10%)
Query: 47 GIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGC 106
G+ P L FK+C + LG+QIH+ T LG +++V ++ I MY +CG
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLG-LDGNVFVAHSAISMYARCGRPDD 65
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNG--------------------------------- 133
+ ++F+EM RDVVSW +I +A+ G
Sbjct: 66 AYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMG 125
Query: 134 -----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
D+ G+F+E+ K ++W AM+ Y N EA+E F RMQ G+E D VTL
Sbjct: 126 KARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTL 185
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V+ +C ++ + + E+ + +++++ +AL+DMY+ CG + +A +F M
Sbjct: 186 ATVLPSCGEVSALSLGKRIHEVIKRRRM--CSSMLLENALMDMYANCGCLKEARDVFDSM 243
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG- 307
R+V S++S+I + HG AI LF M +P+ + F+ +L ACSH GL G
Sbjct: 244 GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 303
Query: 308 -----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
++P +HYACMVDLLGRAGC+ EA + MP++PN VWGALLGAC+I
Sbjct: 304 HYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRI 363
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H N +I +AA+ L L P + G Y++LSNIYA AG W DVS VR +++ G+KK PG S
Sbjct: 364 HSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVS 423
Query: 417 WLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
E GDR +H F GD +HP S I + L +LL R++ GY P + + L+DV +E+K+
Sbjct: 424 NAELGDR--VHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEG 481
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AF L+ T+PG +RI NLR C DCH S + GREI+++D R H
Sbjct: 482 HLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIH 541
Query: 536 HFQ 538
+ +
Sbjct: 542 YMK 544
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++++K W A++ Y +++ L+ M+++GI P + TL+ + +C EV
Sbjct: 138 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 197
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+SLG++IH + I S + + N ++ MY CG L +R VFD M RDVVSWT +I
Sbjct: 198 LSLGKRIH-EVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIIS 256
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY +G REAI+ FE+M G+E D +
Sbjct: 257 AYGRHG-------------------------------HGREAIDLFEKMCGQGLEPDSIA 285
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V +++AC+ G++ + S F + + ++D+ + G I +AY +
Sbjct: 286 FVAILAACSHAGLLDMGKHYF-YSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMV 344
Query: 248 M 248
M
Sbjct: 345 M 345
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ WT++I Y GH +++I L+ M +G+ P S A+ AC+
Sbjct: 237 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 296
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTM---IGMYVKCGFLGCSRKVFD 112
+ +G+ TS+ ++ + M G GC R+ +D
Sbjct: 297 GLLDMGKH------YFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYD 340
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/493 (40%), Positives = 299/493 (60%), Gaps = 19/493 (3%)
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S G+ A+ + G D N+MI Y G +G ++++F+ + V+WT ++
Sbjct: 58 SAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAG 117
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+ GD+ESA +F E+P +D V+W AM++G V N P EA+ F M G + T+
Sbjct: 118 FCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTV 177
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V V+SAC G ++ WV E + +G+AL+DMY+KCG+++ A +F G+
Sbjct: 178 VSVLSACTGAGALETGKWVHVFVEKKRLRW--DEFLGTALVDMYAKCGAVELALEVFTGL 235
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGL---- 303
+ RN ++++MI G AM+G + A+ +F M + P+ VTF+GVL ACSH G
Sbjct: 236 RARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAG 295
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YGV +HYACMVDLL R+G L+EA K++ +MP++P+ VW ALLG C+
Sbjct: 296 KEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCR 355
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N ++A+ N + E+E G++++LSN+YA+ G W+ V VRR ++ G++K PG
Sbjct: 356 LHKNVKMAE---NVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGC 412
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S +E D G IHEF +GD +HP+ +I L ++ R+Q GY V YD+ DEEK++
Sbjct: 413 SSVEMD-GSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQ 471
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL+ P AT+RI+KNLR C DCH F S++ REIVVRD RFH
Sbjct: 472 ALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFH 531
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSC ++W
Sbjct: 532 HFRGGACSCNDFW 544
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 35/279 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ W A+I G + +++ L+ M EG P T+ ++ ACT
Sbjct: 128 RRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGA 187
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + D ++G ++ MY KCG + + +VF + R+ +W +
Sbjct: 188 GALETGKWVHV-FVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAM 246
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A NG A +F ++ L VA D
Sbjct: 247 INGLAMNGYSAKALDMFRQMELNGTVA------------------------------PDE 276
Query: 186 VTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT VGV+ AC+ G + I + G I + ++D+ ++ G + +A+++
Sbjct: 277 VTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHY--ACMVDLLARSGHLQEAHKL 334
Query: 245 FVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
M + +V + +++ G +H A + +M T
Sbjct: 335 ITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEMEAT 373
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/563 (36%), Positives = 323/563 (57%), Gaps = 41/563 (7%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL-----FKACT 63
F+Q+ ++ WTA++ +G ++++ + M + + LSA KA
Sbjct: 108 FDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAG 167
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V D + A T +L G++ + G V+ +++ FD MPERD+++WT
Sbjct: 168 RVFDSMPEWNLVAWTAMLTGYS--------LSGDVVR------AKRAFDSMPERDLIAWT 213
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY----- 178
++ AYA NG + +F +P +D ++W MV V+N E+ E F+RM
Sbjct: 214 AMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALS 273
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+ + VT + ++ AC+ LG + + GF ++VV +AL++ Y +CG++
Sbjct: 274 KGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD--TDLVVSNALVNFYGRCGAL 331
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA +F GM++R+V S+SSMI FA GR A++L+ M+ T P+ + FI VL AC
Sbjct: 332 GDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFAC 391
Query: 299 SHVGL-KCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S+ G+ + G V P+ +HYACMVD+LGRAG L +A ++ MP P +
Sbjct: 392 SNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLL 451
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
+ +L AC+++ + E + AA +FEL+P+ YI L+NIY++A D +R+R+L++
Sbjct: 452 YMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEE 511
Query: 407 TGLKKNPGYSWLEG-DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+KK PG SW+E DR +HEF AGD HP EI + L +++ GY + + VL
Sbjct: 512 RGIKKKPGCSWIEVLDR--VHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVL 569
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
DV ++EK+ +L HSEKLA+AFGL++T PGA +RI+KNLR+C DCH S+V GRE
Sbjct: 570 QDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGRE 629
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD RFHHFQ+G CSC +YW
Sbjct: 630 ILVRDTNRFHHFQNGMCSCNDYW 652
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 24/307 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ F W ++ Y G L ++ ++ M R +G + LSA +
Sbjct: 12 RQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALS---- 67
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G A+T+ DL M+ + + ++ FD+MPERD+V+WT +
Sbjct: 68 -----GHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAM 122
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A A G ME+A F+++P ++ +WT++++ Y ++ + A F+ M E +
Sbjct: 123 LAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP----EWNL 178
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V +++ + G + A + P +++ +A++ Y+ G + IF
Sbjct: 179 VAWTAMLTGYSLSGDVVRAKRAFDSM------PERDLIAWTAMLSAYAFNGHLRYTREIF 232
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-----VKTETKPNGVTFIGVLTACSH 300
M +R++ S+++M+ + + +LF M + PN VTFI +L ACS
Sbjct: 233 QRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSF 292
Query: 301 VGLKCYG 307
+G G
Sbjct: 293 LGALAEG 299
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 51/298 (17%)
Query: 102 GFLGC---SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVT 158
G LGC +R++FD + +RD SW ++ YA +GD+ +A G+F+ +P +WTA+++
Sbjct: 3 GRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLS 62
Query: 159 GYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN------------- 205
+ + EA F+ MQ E D + +++ A I+ A
Sbjct: 63 AFALSGHHEEAKTLFDTMQ----ERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVA 118
Query: 206 WVCEIAEGSGFG------------PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
W +A + G P N+ ++L+ Y + G + A R+F M + N+
Sbjct: 119 WTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNL 178
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----LKCYGV 308
++++M+ G+++ G A + F M + + + + +L+A + G + +
Sbjct: 179 VAWTAMLTGYSLSGDVVRAKRAFDSMPERDL----IAWTAMLSAYAFNGHLRYTREIFQR 234
Query: 309 SPSTD--HYACMVDLLGRAGCLEEALKMVEKMP--------VEPNGGVWGALLGACQI 356
P D +A MV L LEE+ ++ ++MP + PN + LL AC
Sbjct: 235 MPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSF 292
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 37/204 (18%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-----EGIGPVSFTLSAL 58
+ R +F+++ ++ W ++ + L++S L+ M R +G+ P T L
Sbjct: 227 YTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITL 286
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
AC+ + ++ G++IHA + GF +DL V N ++ Y +CG LG ++ VFD M RD
Sbjct: 287 LDACSFLGALAEGRKIHA-AVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRD 345
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
V+SW+ +I A+A G ++ EA+E + RM
Sbjct: 346 VISWSSMISAFAQRGRVD-------------------------------EAMELYHRMLS 374
Query: 179 AGVETDYVTLVGVISACAQLGVIK 202
G D + + V+ AC+ GV++
Sbjct: 375 EGTLPDDIIFISVLFACSNSGVVE 398
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 324/555 (58%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTE 64
R +F+++ +++ F W A+I GY+ QG +++ L+ M+ E FTLS+ A
Sbjct: 149 RKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAA 208
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + G++IH G ++ G E D V WT
Sbjct: 209 ISSLRRGKEIH--------------------GYLIRSGL------------ELDEVVWTA 236
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y G + A G+F+++ KD V+WT M+ ++ + +E F + +GV +
Sbjct: 237 LLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPN 296
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T GV++ACA L + V G+ P + SAL+ +YSKCG+ + A R+
Sbjct: 297 EYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS--FAASALVHVYSKCGNTETARRV 354
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M + ++ S++S+I+G+A +G+ A+Q F ++++ TKP+ +TF+GVL+AC+H GL
Sbjct: 355 FNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLV 414
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ + DHYAC++DLL R+G +EA +++ MP++P+ +W +LLG
Sbjct: 415 DIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLG 474
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH N E+A+ AA LFELEP+ YI LSNIYA+AG+W + ++VR + G+ K
Sbjct: 475 GCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKK 534
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E R V H F GD +HP ++I + LG+L +++ +GY + VL+DV +E+
Sbjct: 535 PGKSWIEIKRQV-HVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQ 593
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ + HSEKLA+AFG+++TSPG +++ KNLR C DCH M S+++ R+I+VRD+
Sbjct: 594 KEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSN 653
Query: 533 RFHHFQDGKCSCGNY 547
RFH F DG CSC +Y
Sbjct: 654 RFHCFVDGSCSCKDY 668
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 182/376 (48%), Gaps = 27/376 (7%)
Query: 33 LKDSISLYCSMRR--EGIG-------PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGG 83
++ I L+C R E + P S L AC + LG+++HA T
Sbjct: 35 FEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHT-KASN 93
Query: 84 FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFN 143
F + + N +I MY KCG L ++ +FDE+P++D+ SW +I YAN G +E A LF+
Sbjct: 94 FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153
Query: 144 ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVISACAQLGVIK 202
E+P +D +W A+++GYV EA++ F MQ + TL ++A A + ++
Sbjct: 154 EMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLR 213
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ SG + VV +AL+D+Y KCGS+++A IF M +++ S+++MI
Sbjct: 214 RGKEIHGYLIRSGLEL--DEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHR 271
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPS 311
GR LF D++ + +PN TF GVL AC+ H + G P
Sbjct: 272 CFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331
Query: 312 TDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
+ + +V + + G E A ++ +MP P+ W +L+ + P++A L
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390
Query: 372 E--LEPDKIGNYIILS 385
+PD+I +LS
Sbjct: 391 RSGTKPDEITFVGVLS 406
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 317/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE ++ ++ WT ++ G G +++ ++ MR EG+G +T ++ AC +
Sbjct: 231 RALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGAL 290
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA I + +++VG+ ++ MY KC + + VF M ++++S
Sbjct: 291 AALEEGKQIHAY-ITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIIS---- 345
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
WTAM+ GY QN EA+ F MQ G++ D
Sbjct: 346 ---------------------------WTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VIS+CA L ++ +A SG P V V +AL+ +Y KCGSI+DA+R+F
Sbjct: 379 FTLGSVISSCANLASLEEGAQFHCLALVSGLRPY--VTVSNALVTLYGKCGSIEDAHRLF 436
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M + S++++++G+A G+A I LF M+ KP+GVTFIGVL+ACS GL
Sbjct: 437 DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVD 496
Query: 306 YGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G S P DHY CM+DL R+G L++A + +++MP P+ W LL A
Sbjct: 497 KGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EI + AA +L +L+P +Y++L +++AS G W+DV+++RR ++ +KK P
Sbjct: 557 CRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEP 616
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F A D +HP S I + L L ++ +GY+P++ SVL+DV+D EK
Sbjct: 617 GCSWIKY-KNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEK 675
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+L HSEKLA+AFGL+ P +RI+KNLR+C DCH S++ GR+I+VRD +R
Sbjct: 676 VHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 735
Query: 534 FHHFQDGKCSCGNYW 548
FH F +G CSCG++W
Sbjct: 736 FHKFSNGICSCGDFW 750
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 196/392 (50%), Gaps = 17/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACTEV 65
+F + ++ + AL+ G+ G + Y ++ R+ G+ P T+S + + +
Sbjct: 99 LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D +LG+Q+H Q + LG F + + G+ ++ MY K G +G +R+VFDEM ++VV +
Sbjct: 159 GDRALGRQVHCQILRLG-FGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTM 217
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I + A LF + +D + WT MVTG QN EA++ F RM+ GV D
Sbjct: 218 ITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQ 277
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++AC L ++ + + + +NV VGSAL+DMYSKC S+ A +F
Sbjct: 278 YTFGSILTACGALAALEEGKQIHAYITRTCYE--DNVFVGSALVDMYSKCRSVRLAEAVF 335
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +N+ S+++MI+G+ +G A+++F +M + KP+ T V+++C+++
Sbjct: 336 RRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLE 395
Query: 303 ----LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
C G+ P +V L G+ G +E+A ++ ++M ++G
Sbjct: 396 EGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYA 455
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + L + ++PD + +LS
Sbjct: 456 QFGKAKETIDLFEKMLSKGVKPDGVTFIGVLS 487
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
L +HA + S Y+ NT++ Y G L +R+VFD MP R++V+ L+ A
Sbjct: 28 LTAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSAL 87
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM--QYAGVETDYVT 187
A G + LF LP +D V++ A++ G+ + A + + AGV +T
Sbjct: 88 ARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRIT 147
Query: 188 LVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ GV+ + LG V C+I GFG GS L+DMY+K G I DA R+F
Sbjct: 148 MSGVVMVASALGDRALGRQVHCQILR-LGFGAY--AFTGSPLVDMYAKVGPIGDARRVFD 204
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
M+ +NV ++MI G A LF + + ++ +T+ ++T + GL+
Sbjct: 205 EMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDS----ITWTTMVTGLTQNGLE 258
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 320/584 (54%), Gaps = 54/584 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W ++ G G ++++ + SM ++G+ P + T+S+L K+ + G +IH
Sbjct: 238 NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIH 297
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
L D+Y G ++ MY KCG L C++KVFD + R++ +W L+ YAN G
Sbjct: 298 C-FFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRF 356
Query: 136 ESAGGLFNELPLKDKV-----AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+ A L EL K+++ W ++TGY N + +A+ +++ AGV + V+
Sbjct: 357 DIALELV-ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTS 415
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPI------------------------------- 219
+IS G + + + C + G P
Sbjct: 416 LISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRA 475
Query: 220 --NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
++VV +ALIDMYSK GS+ A IF ++Q+N+ ++M+ G A+HG+ AI+LF
Sbjct: 476 YDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFH 535
Query: 278 DMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRA 325
DM + KP+ +TF +LTAC +GL YGV P+T++YACMVDLL R
Sbjct: 536 DMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARC 595
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
G L+EA+ +E+ P++P WGALL C IH N +A++AA +LF LEP NY+++
Sbjct: 596 GYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMM 655
Query: 386 NIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQAL 445
N+Y M+D+ ++ +K G+ PG+SW++ ++G IH F HP + EI + L
Sbjct: 656 NLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQG-IHVFEVDGKPHPETAEIYEEL 714
Query: 446 GDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG-ATVRIMKN 504
L+ +++ GY P+ + Y+V +EEK+++L+ H+EKLA+ +GL+ + A VR+MKN
Sbjct: 715 IRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKN 774
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
R+C DCH S + R+I++RD +RFHHF DGKCSC +YW
Sbjct: 775 TRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 818
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 21/302 (6%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+ +HA + L + V + GMY + + + +V D M VV W ++ A
Sbjct: 157 GRAVHAYALKLA-LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCA 215
Query: 131 NNG----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
G +E A + P + W +++G ++ + REA+ M G+ D
Sbjct: 216 RLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 275
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+ ++ + A G++++ + + P +V G+AL+DMY+KCG +D A ++F
Sbjct: 276 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEP--DVYTGTALVDMYAKCGRLDCAQKVFD 333
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
++ RN+ +++S++ G+A GR A++L M K P+ T+ G++T S G
Sbjct: 334 ALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQ 393
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGALLG 352
+K GV+P+ + ++ G E++ +M V+P+ LL
Sbjct: 394 AVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLR 453
Query: 353 AC 354
AC
Sbjct: 454 AC 455
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/448 (19%), Positives = 170/448 (37%), Gaps = 69/448 (15%)
Query: 45 REGIGPVSF-TLSALFKACTEV--------LDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
R G+ P S L +L + C ++ + L Q+H+ + G + D V ++
Sbjct: 36 RTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTG-LSRDPRVTCALV 94
Query: 96 GMYVKCGFLGCSRKVFDEMPE---RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVA 152
+ + G ++ E E +D V W + + A + + A +F E+ +
Sbjct: 95 DLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARG--- 151
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
V + R Y ++ L G+ + A + + +
Sbjct: 152 --------VPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAA------ATRVLD 197
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR----NVFSYSSMILGFAMHGR 268
G G +VV +A++ ++ G +DDA + M + NV ++++++ G + HGR
Sbjct: 198 AMGAG---SVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGR 254
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----------VSPSTDHYAC 317
A+ + M+K +P+ T +L + ++ GL +G + P
Sbjct: 255 DREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTA 314
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG----ACQIHRNPEIAQIAANHLFEL 373
+VD+ + G L+ A K+ + + N W +L+ A + E+ ++ + L
Sbjct: 315 LVDMYAKCGRLDCAQKVFDALE-HRNLTTWNSLVAGYANAGRFDIALELVELMKKN--RL 371
Query: 374 EPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDL 433
+PD I + L Y+ G + R +K G+ N SW G H D
Sbjct: 372 DPD-ITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNV-VSWTSLISGSCHNGEYEDS 429
Query: 434 THPNSTEIQQALGDLLDRLQADGYQPNL 461
+ +Q DG QP+L
Sbjct: 430 FY------------FCHEMQKDGVQPSL 445
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 315/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +N FLW LIR Y G + +I LY M G+ P +FT KAC +
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD+ G+++H + +L + D++V ++ MY KCG + +R V
Sbjct: 177 LDLETGREVH-ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAV--------------- 220
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F+ + ++D V W +M+ Y QN +P EA+ M GV
Sbjct: 221 ----------------FDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTI 264
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLV ISA A + + GF + + ++L+DMY+K G + A +F
Sbjct: 265 ATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKL--KTSLVDMYAKSGWVQVARVLF 322
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGL- 303
+ +R + S+++MI G+ MHG A++LF M V+ + P+ +TF+GVL+AC+H G+
Sbjct: 323 EQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMV 382
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P+ H+ C+VD+LG AG EEA +++ MP++P+ G+WGALL
Sbjct: 383 KEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLN 442
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N E+ ++A L ELEP+ GNY++LSNIYA +G W+ +RVR+L+ GLKK
Sbjct: 443 GCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKI 502
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E +G H F GD +HP S EI + L L + GY P+ V +DV D+E
Sbjct: 503 IGCSWIE-LKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDE 561
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ ++ +HSE+LA+AFGL++T G + + KNLR+CEDCH+ + SQ++ REI++RD
Sbjct: 562 KRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVN 621
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF +G+CSC +YW
Sbjct: 622 RYHHFVNGECSCKDYW 637
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+++ ++C + G+Q+H + +L+ G D + ++ +Y CG +G +R+
Sbjct: 66 TSVLQSCVASRSLGTGRQLHGR-LLVSGLGPDTVLATKLVDLYAACGLVGHARR------ 118
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
LF+ +P ++ W ++ Y ++ AI+ +
Sbjct: 119 -------------------------LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRG 153
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M GVE D T + ACA L ++ V E G+ +G ++ V + L+DMY+KC
Sbjct: 154 MVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWG--EDMFVCAGLVDMYAKC 211
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G +DDA +F ++ R+ ++SMI + +GR A+ L DM P T + +
Sbjct: 212 GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTI 271
Query: 296 T 296
+
Sbjct: 272 S 272
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
SG GP + V+ + L+D+Y+ CG + A R+F GM +RNVF ++ +I +A G AI
Sbjct: 91 SGLGP--DTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAI 148
Query: 274 QLFGDMVKTETKPNGVTF---------IGVLTACSHVGLKCYGVSPSTDHYAC--MVDLL 322
QL+ MV +P+ T+ + L V + G D + C +VD+
Sbjct: 149 QLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMY 208
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ GC+++A + +++ V + VW +++ A
Sbjct: 209 AKCGCVDDARAVFDRIRVR-DSVVWNSMIAA 238
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 306/558 (54%), Gaps = 56/558 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + F + +IRGY+ ++++ Y M + G P +FT L KACT +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIH Q LG +D++V N++I MY +C
Sbjct: 148 IREGKQIHGQVFKLG-LEADVFVQNSLINMYGRC-------------------------- 180
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVETDYV 186
G+ME + +F +L K +W++MV+ E + F M ++ +
Sbjct: 181 -----GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN----NVVVGSALIDMYSKCGSIDDAY 242
+V + ACA G + + GF N N++V ++L+DMY KCG +D A
Sbjct: 236 GMVSALLACANTGALNLGMSI------HGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
IF M++RN +YS+MI G A+HG +A+++F M+K +P+ V ++ VL ACSH G
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 303 LKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G V P+ +HY C+VDLLGRAG LEEAL+ ++ +P+E N +W
Sbjct: 350 LVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTF 409
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
L C++ +N E+ QIAA L +L G+Y+++SN+Y+ MWDDV+R R + + GLK
Sbjct: 410 LSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLK 469
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
+ PG+S +E +G H F + D +HP EI + L + +L+ +GY P+L +L +V +
Sbjct: 470 QTPGFSIVEL-KGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDE 528
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEKK L HS+K+A+AFGLL T PG+ ++I +NLR+C DCH + S + REIVVRD
Sbjct: 529 EEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRD 588
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH F+ G CSC +YW
Sbjct: 589 RNRFHLFKGGTCSCKDYW 606
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 22/282 (7%)
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
M A +F + + M+ GYV EA+ ++ M G E D T ++ A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 195 CAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
C +L I+ + G F G +V V ++LI+MY +CG ++ + +F ++ +
Sbjct: 142 CTRLKSIREGKQI----HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVSP- 310
S+SSM+ A G + LF M +T K + L AC++ G G+S
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 311 ----------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
+ +VD+ + GCL++AL + +KM + N + A++ +H
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEG 316
Query: 361 EIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRV 400
E A + + + LEPD + Y+ + N + +G+ + RV
Sbjct: 317 ESALRMFSKMIKEGLEPDHVV-YVSVLNACSHSGLVKEGRRV 357
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 282/436 (64%), Gaps = 15/436 (3%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ YA G + A +F ++ KD ++WT++VTG V N EA+ F M+ G+ D
Sbjct: 8 LVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPD 67
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+SACA+L V+++ V SG G +++ V ++L+ MY+KCG I+DA ++
Sbjct: 68 QIVIAAVLSACAELTVLEFGKQVHANFLKSGLG--SSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M+ ++V +++++I+G+A +GR ++ + BM+ + KP+ +TFIG+L ACSH GL
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ YG+ P +HYACM+DLLGR+G L EA +++ +M V+P+ VW ALL
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N E+ + AAN+LFELEP Y++LSN+Y++AG W++ ++ RRL+K+ G+ K
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E V H F + D +HP + EI + +++ ++ GY P++ L+D+ +E
Sbjct: 306 PGCSWIEMSSKV-HRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEG 364
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L HSEKLA+AFGLLT PGA +RI KNLRIC DCH M S V R +++RD+
Sbjct: 365 KELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 424
Query: 533 RFHHFQDGKCSCGNYW 548
FHHF++G CSC +YW
Sbjct: 425 CFHHFREGACSCSDYW 440
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 37/287 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K+ WT+L+ G + G ++++ L+C MR GI P ++A+ AC E+
Sbjct: 24 VFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTV 83
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HA L G S L V N+++ MY KCG + + KVFD M +DV++WT LIV
Sbjct: 84 LEFGKQVHAN-FLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIV 142
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA NG + RE++ ++ M +GV+ D++T
Sbjct: 143 GYAQNG-------------------------------RGRESLNFYNBMIASGVKPDFIT 171
Query: 188 LVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+G++ AC+ G++++ ++ + E G P + +ID+ + G + +A +
Sbjct: 172 FIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHY--ACMIDLLGRSGKLMEAKELLN 229
Query: 247 GMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M Q + + +++ +HG + ++ + E K N V ++
Sbjct: 230 QMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPK-NAVPYV 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
+V +AL+DMY+K G D A+ +F M ++V S++S++ G +G A++LF +M
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 283 ETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
P+ + VL+AC+ H G+ S +V + + GC+E+A
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 332 LKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFE-LEPDKIGNYIILSNIYA 389
K+ + M ++ + W AL+ G Q R E B + ++PD I +I L +
Sbjct: 123 NKVFDSMEIQ-DVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFI-TFIGLLFACS 180
Query: 390 SAGMWDD-VSRVRRLLKMTGLKKNP 413
AG+ + S + + ++ G+K P
Sbjct: 181 HAGLVEHGRSYFQSMEEVYGIKPGP 205
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ ++ ++ WTALI GY G ++S++ Y M G+ P T L AC+
Sbjct: 125 VFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGL 184
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G+ + G MI + + G L ++++ ++M + D W L+
Sbjct: 185 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 244
Query: 127 VAYANNGDME----SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
A +G++E +A LF EL K+ V + + Y K EA + M+ GV
Sbjct: 245 AACRVHGNVELGERAANNLF-ELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303
Query: 183 TD 184
+
Sbjct: 304 KE 305
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 307/556 (55%), Gaps = 47/556 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
RLVF+ + ++ W +I GY G ++ L+ M REG FTLS+ AC
Sbjct: 111 ARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAA 170
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++ +Q+H + L S+ +VG ++ +Y KC + + VF++MPER +V+W+
Sbjct: 171 KYAINECKQLHTIALKL-ALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSS 229
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L Y NG E EA+ F Q GVE
Sbjct: 230 LFAGYVQNGLHE-------------------------------EALHLFRCAQREGVELT 258
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL ++SACA L + + + GF N V ++L+D+Y++CG I+ AY +
Sbjct: 259 EFTLSAILSACASLALKIEGIQLHAVILKCGFH--GNFFVAASLVDVYARCGQIEKAYAL 316
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M+ +NV +++MI F+ H + A+ LF M + PN VT++ VL+ CSH GL
Sbjct: 317 FAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLV 376
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G V P+ HY+CMVD+LGR+G +EA +++ KMP EP +WG+LLG
Sbjct: 377 EKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLG 436
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+ + N +A+IAA LF+LEPD GN+++LSN+YA++G W++V R+ LK +G KK
Sbjct: 437 SCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKE 496
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+E +G +H F G+ HP T+I L ++ ++ + ++ L+DV E+
Sbjct: 497 MGRSWIEA-KGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQ 555
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLAL+FGL++ + I KNLRIC DCH FM A+ + R ++VRD
Sbjct: 556 KEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTN 615
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG++W
Sbjct: 616 RFHHFKDGSCSCGDFW 631
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 49/352 (13%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+S + C + + +G+ H I G +D N +I +Y KCG C+R VFD M
Sbjct: 60 ISQRLQLCAKRKSLLVGKSCHGLAIHFG-LVTDTLTCNILINLYTKCGRNDCARLVFDIM 118
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
R +VS W M+ GY + + +A++ F
Sbjct: 119 HVRSIVS-------------------------------WNTMIAGYTHSGEDVQALKLFS 147
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
RM G TL I ACA I + IA +N VG+A++D+Y+K
Sbjct: 148 RMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALD--SNSFVGTAILDVYAK 205
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
C I DA +F M +R + ++SS+ G+ +G A+ LF + + T +
Sbjct: 206 CNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAI 265
Query: 295 LTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKMPVEPN 343
L+AC+ + LK G+ C +VD+ R G +E+A + M N
Sbjct: 266 LSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYME-HKN 324
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELE--PDKIGNYIILSNIYASAGM 393
+W A++ + H + A I + +L P+++ Y+ + ++ + AG+
Sbjct: 325 VVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEV-TYLSVLSVCSHAGL 375
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 308/542 (56%), Gaps = 48/542 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ L+ Y G +K+S+ L+ ++ G +F + L L++ +G+QIH+QTI
Sbjct: 368 YNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTI 427
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ S++ VGN+++ MY KCG G A
Sbjct: 428 VTDAI-SEILVGNSLVDMYAKCGEFG-------------------------------EAN 455
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F++L ++ V WTAM++ YVQ + ++ F MQ A + D T ++ ACA L
Sbjct: 456 RIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLA 515
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ + GSG+ I+NV GSAL+DMY+KCGSI DA ++F M RN S++++
Sbjct: 516 SLTLGKQLHSHIIGSGY--ISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNAL 573
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I +A +G ++LF +MV++ +P+ V+ + +L ACSH GL + Y
Sbjct: 574 ISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYK 633
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+ P +HYA +D+L R G +EA K++ +MP EP+ +W ++L +C IH+N E+A+ AA
Sbjct: 634 LVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAA 693
Query: 368 NHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
N LF ++ + Y+ +SNIYA+AG WD+V +V++ ++ G+KK P YSW+E H
Sbjct: 694 NQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKT-H 752
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F A D THP EI + L +L +++ GY+P+ L++V +E K L HSE++A+
Sbjct: 753 VFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAI 812
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AF L++T G+ + +MKNLR C DCH + S+++ REI VRD+ RFHHF+DG C+C +
Sbjct: 813 AFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRD 872
Query: 547 YW 548
YW
Sbjct: 873 YW 874
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 170/360 (47%), Gaps = 52/360 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + ++ + AL+ GY +G +++I+L+ M+ G P FT +A+ A ++ D
Sbjct: 255 LFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDD 314
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQ+H G VKC F+ +V L+
Sbjct: 315 IEFGQQVH--------------------GFVVKCNFVW------------NVFVANALLD 342
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET---D 184
Y+ + + A LF E+P D +++ +VT Y N + +E++E F+ +Q+ G +
Sbjct: 343 FYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFP 402
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ TL+ + + L + + + + + I+ ++VG++L+DMY+KCG +A RI
Sbjct: 403 FATLLSIAAISLNLDIGRQIHSQTIVTDA-----ISEILVGNSLVDMYAKCGEFGEANRI 457
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F + ++ +++MI + G ++LF +M + + + T+ ++ AC+
Sbjct: 458 FSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASL 517
Query: 300 ------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H + G + + +VD+ + G +++AL+M ++MPV N W AL+ A
Sbjct: 518 TLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 130/247 (52%), Gaps = 6/247 (2%)
Query: 55 LSALFKACTEVLDVSLGQ---QIHAQ-TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
++ + K CT L +L +H +I+ GF + Y N ++ +++ G L +RK+
Sbjct: 64 MNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKL 123
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FDEMP +++ S +I+ Y +G++ A LF+ + + V WT ++ GY QN + REA
Sbjct: 124 FDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAF 183
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F M G++ D+V+L ++S + + V G+ + +VV ++L+D
Sbjct: 184 GLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYD--STLVVSNSLLD 241
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
Y K S+ A+++F + +R+ ++++++ G++ G AI LF M + +P T
Sbjct: 242 SYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFT 301
Query: 291 FIGVLTA 297
F +LTA
Sbjct: 302 FAAILTA 308
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 160/359 (44%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + + WT LI GY +++ L+ M R GI P +L+ L TE
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEF 211
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V+ +Q+H+ I LG + S L V N+++ Y K LG
Sbjct: 212 DSVNEVRQVHSHVIKLG-YDSTLVVSNSLLDSYCKTRSLGL------------------- 251
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A LFN++P +D V + A++TGY + REAI F +MQ G
Sbjct: 252 ------------AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTE 299
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++A QL I++ V F + NV V +AL+D YSK + +A ++F
Sbjct: 300 FTFAAILTAGIQLDDIEFGQQVHGFVVKCNF--VWNVFVANALLDFYSKHDRVVEASKLF 357
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
M + + SY+ ++ +A +GR +++LF ++ T F +L+ +
Sbjct: 358 YEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLD 417
Query: 301 VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G + + + TD + +VD+ + G EA ++ + ++ + W A++ +
Sbjct: 418 IGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISS 475
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 46/288 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + ++ WTA+I Y+ +G +D + L+ M+R IG + T +++ +AC +
Sbjct: 457 IFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLAS 516
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++LG+Q+H+ I+ G+ S+++ G+ ++ MY KCG + + ++F EMP R+ VSW LI
Sbjct: 517 LTLGKQLHSH-IIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALIS 575
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA NGD + + FE M +G++ D V+
Sbjct: 576 AYAQNGDGDC-------------------------------TLRLFEEMVRSGLQPDSVS 604
Query: 188 LVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
L+ ++ AC+ G++ +Y + + I + + ++ IDM + G D+A +
Sbjct: 605 LLSILCACSHCGLVEEGLQYFDSMTRI-----YKLVPKKEHYASTIDMLCRGGRFDEAEK 659
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAH----AAIQLFGDMVKTETKP 286
+ M + + +SS++ +H AA QLF V + P
Sbjct: 660 LMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 307/554 (55%), Gaps = 48/554 (8%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LVF+ + + WT+LI Y +G ++I L+ M REG+ P FT++ + AC
Sbjct: 54 LVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG 113
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+ +H I S+++V N ++ MY KCG
Sbjct: 114 SLENGKDVH-NYIRENDMQSNIFVCNALMDMYAKCG------------------------ 148
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
ME A +F E+P+KD ++W M+ GY +N+ P EA+ F M ++ D
Sbjct: 149 -------SMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGT 200
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL ++ ACA L + V +GF ++ V +AL+DMY KCG A +F
Sbjct: 201 TLACILPACASLASLDRGKEVHGHILRNGF--FSDQQVANALVDMYVKCGVPVLARLLFD 258
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
+ +++ +++ MI G+ MHG + AI F +M + +P+ V+FI +L ACSH GL
Sbjct: 259 MIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDE 318
Query: 307 G------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G V P +HYAC+VDLL R+G L A K ++ MP+EP+ +WGALL C
Sbjct: 319 GWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGC 378
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH + ++A+ A H+FELEP+ G Y++L+N YA A W++V ++R+ + GLKKNPG
Sbjct: 379 RIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPG 438
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + +H F AG+ +HP + +I+ L L +++ +GY P R L + +K+
Sbjct: 439 CSWIEV-KSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKE 497
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEKLA+AFG+L P T+R+ KNLR+C DCH S+ +GREIV+RD+ RF
Sbjct: 498 TALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRF 557
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG C C +W
Sbjct: 558 HHFKDGVCCCRGFW 571
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 35/248 (14%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ ++ +AC DVSLG+ +H + + NT++ MY KCG L + VFD M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFC-NTLLDMYAKCGVLDGAILVFDLM 59
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
R VV+WT LI AYA G L D EAI F
Sbjct: 60 SVRTVVTWTSLIAAYAREG-------------LSD------------------EAIRLFH 88
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M GV D T+ V+ ACA G ++ V + +N+ V +AL+DMY+K
Sbjct: 89 EMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQ--SNIFVCNALMDMYAK 146
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGS++DA +F+ M +++ S+++MI G++ + + A+ LFGDMV E KP+G T +
Sbjct: 147 CGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACI 205
Query: 295 LTACSHVG 302
L AC+ +
Sbjct: 206 LPACASLA 213
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINN--VVVGSALIDMYSKCGSIDDAYRIF 245
+V ++ ACA G + V GSG + + L+DMY+KCG +D A +F
Sbjct: 1 MVSILQACANCGDVSLGRAV----HGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVF 56
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M R V +++S+I +A G + AI+LF +M + P+ T VL AC+ G
Sbjct: 57 DLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLE 116
Query: 306 YGVSP---------STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G ++ + C ++D+ + G +E+A + +MPV+ + W ++G
Sbjct: 117 NGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGY 175
Query: 355 QIHRNP-EIAQIAANHLFELEPD 376
+ P E + + + E++PD
Sbjct: 176 SKNSLPNEALSLFGDMVLEMKPD 198
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
RL+F+ + K+ WT +I GY + G ++I+ + MR+ GI P + ++ AC+
Sbjct: 252 LARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSW 122
+ G + L ++ + + G L + K MP E D W
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371
Query: 123 TELIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
L+ + D++ A + EL ++ + + Y + K E + +++
Sbjct: 372 GALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRR 431
Query: 180 GVETD 184
G++ +
Sbjct: 432 GLKKN 436
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 314/553 (56%), Gaps = 68/553 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + N F++ ALIRG + S+S + M R I P TL + K+ ++D
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+ +H + LG D +V +++ MYVK G LG ++FDE
Sbjct: 154 VGLGRCLHGGVMKLG-LEFDSFVRVSLVDMYVKIGELGFGLQLFDES------------- 199
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
P ++K E+I + + GV + +T
Sbjct: 200 ------------------PQRNKA----------------ESI-----LLWNGVRPNDLT 220
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V + AC ++G ++ + +GF N +G+AL+DMY+KCG+I A R+FV
Sbjct: 221 VVSALLACTKIGALQVGERIHNYLSSNGFQL--NRGIGTALVDMYAKCGNIKSASRVFVE 278
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
K +++ ++S MI G+A+HG A+Q F M P+ V F+ +LTACSH G
Sbjct: 279 TKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQG 338
Query: 303 ------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
++ Y + P+ HY +VDLLGRAG L+EAL ++ MP+ P+ +WGAL AC+
Sbjct: 339 LNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACR 398
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H+N E+A++ A L +LEP G+Y+ LSN+YA+ G W+DV RVR L+K G++K+PG+
Sbjct: 399 AHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGW 458
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S++E + G +H F AGD H + EI L ++ + +GY P VL+++ +EEK+
Sbjct: 459 SYIEVE-GQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKED 517
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L +HSEKLALAFGL++T+PG+T+RI+KNLR+C DCH M AS++ REI++RD RFH
Sbjct: 518 ALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFH 577
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSCG+YW
Sbjct: 578 HFKDGTCSCGDYW 590
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 315/581 (54%), Gaps = 62/581 (10%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++IR Y G S+S + M G P ++ K+CT + D+ G+ +H I
Sbjct: 74 WKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCII 133
Query: 80 LLG-GFTSDLYVGNTMIGMYVKCGFL---GCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
LG GF DLY N ++ MY K L +KVFDE DV S E Y +
Sbjct: 134 RLGMGF--DLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----L 186
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
S +F +P +D V+W +++G QN +A+ M A + D TL V+
Sbjct: 187 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A+ + + A +G+ +V +GS+LIDMY+KC +DD+ R+F + Q + S
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDA--DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 304
Query: 256 YSSMILGFAMHG-----------------------------------RAHAAIQLFGDMV 280
++S+I G +G H QL G ++
Sbjct: 305 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 364
Query: 281 KTE-TKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGC 327
+ E KPN V F+ VLTACSH GL + Y + P +HYA + DLLGR G
Sbjct: 365 RMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 424
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNI 387
LEEA + + M +EP G VW LL AC++H+N E+A+ + LF ++P IG Y++LSNI
Sbjct: 425 LEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 484
Query: 388 YASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGD 447
Y++AG W D ++R ++ G+KK P SW+E + +H F AGD +HP I +AL
Sbjct: 485 YSAAGRWKDARKLRIAMRDKGMKKKPACSWIE-IKNKVHAFVAGDKSHPYYDRINEALKV 543
Query: 448 LLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRI 507
LL++++ +GY + VL+DV +E+K+ +L +HSE+LA+ FG+++T G T+R+ KNLR+
Sbjct: 544 LLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRV 603
Query: 508 CEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
C DCH S+++GREIVVRDN RFHHF+DGKCSCG++W
Sbjct: 604 CVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 148/345 (42%), Gaps = 53/345 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + ++ W +I G G +D++ + M + P SFTLS++ E
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++ G++IH I G+ +D+++G+++I MY KC + S +VF +P+ D +SW +
Sbjct: 250 VNLLKGKEIHGYAI-RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G VQN E +++F++M A ++ ++
Sbjct: 309 I-------------------------------AGCVQNGMFDEGLKFFQQMLIAKIKPNH 337
Query: 186 VTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+ ++ ACA L + + I G P N V A++ S G +D+A++
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKP--NYVAFMAVLTACSHAGLVDEAWKY 395
Query: 245 FVGMKQR-----NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC- 298
F M Q + Y+++ GR A + DM +P G + +L AC
Sbjct: 396 FNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACR 452
Query: 299 --------SHVGLKCYGVSPST-DHYACMVDLLGRAGCLEEALKM 334
V K + V P Y + ++ AG ++A K+
Sbjct: 453 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 497
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 323/560 (57%), Gaps = 51/560 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ LVF+++ K+ WT +I Y +++ L ++ +G+ + + + AC
Sbjct: 265 AYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC 324
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +S +++H T+ G SDL + N +I +Y CG
Sbjct: 325 SGLRCLSHAKEVHGYTLKRG--LSDLMMQNMIIDVYADCG-------------------- 362
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ A +F + KD V+WT+M++ YV N EA+ F M+ VE
Sbjct: 363 -----------NINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D +TLV ++SA A L + + GF + V ++L+DMY+ CGS+++AY
Sbjct: 412 PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTV--NSLVDMYACCGSLENAY 469
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F+ + +++ +++MI + MHGR AA++LF M + P+ +TF+ +L ACSH G
Sbjct: 470 KVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSG 529
Query: 303 L-----------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L KC Y + P +HYAC+VDLLGRA LEEA V+ M +EP VW A
Sbjct: 530 LINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAF 589
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+IH N ++ +IAA L +L+PD G+Y+++SN++A++G W DV VR +K GLK
Sbjct: 590 LGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLK 649
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDV 468
KNPG SW+E G++ +H F D +HP S +I Q L + ++L+ + GY P + VL++V
Sbjct: 650 KNPGCSWIEVGNK--VHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNV 707
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
EEK ++L HSE+LA+A+GL++TS G +RI KNLR+C DCH F S+ RE++V
Sbjct: 708 GKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIV 767
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF+DG CSCG++W
Sbjct: 768 RDASRFHHFEDGVCSCGDFW 787
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 56/391 (14%)
Query: 5 PRLVFEQVKYKNPFL-WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ +N + W ++I Y L G +++ L+ M++ G+G ++TL A +AC
Sbjct: 64 ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG +IHA IL D+YV N ++ M+V+ G + + ++FDE+ E+D ++W
Sbjct: 124 DSSFKKLGMEIHA-AILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITW- 181
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+M+ G+ QN EA+++F +Q A ++
Sbjct: 182 ------------------------------NSMIAGFTQNGLYNEALQFFCGLQDANLKP 211
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+L+ +++A +LG + + A + +N+ +G+ LIDMYSKC + A
Sbjct: 212 DEVSLISILAASGRLGYLLNGKEIHAYAMKNWLD--SNLRIGNTLIDMYSKCCCVAYAGL 269
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG-VLTACSHVG 302
+F M +++ S++++I +A + A++L V+T+ IG L ACS G
Sbjct: 270 VFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK-VQTKGMDVDTMMIGSTLLACS--G 326
Query: 303 LKCYGVSPSTDHYAC------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L+C + Y ++D+ G + A +M E + + + W ++
Sbjct: 327 LRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCK-DVVSWTSM 385
Query: 351 LGACQIHRNPEIAQIAANHLFE---LEPDKI 378
+ +C +H + +L + +EPD I
Sbjct: 386 I-SCYVHNGLANEALGVFYLMKETSVEPDSI 415
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 148/292 (50%), Gaps = 35/292 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ +F+++ K+ W ++I G+ G +++ +C ++ + P +L ++ A
Sbjct: 164 SYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAAS 223
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + G++IHA + S+L +GNT+I MY KC + + VFD+M +D++SW
Sbjct: 224 GRLGYLLNGKEIHAYA-MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISW 282
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I AYA QN EA++ ++Q G++
Sbjct: 283 TTVIAAYA-------------------------------QNNCHTEALKLLRKVQTKGMD 311
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D + + + AC+ L + +A V G ++++++ + +ID+Y+ CG+I+ A
Sbjct: 312 VDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG---LSDLMMQNMIIDVYADCGNINYAT 368
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
R+F +K ++V S++SMI + +G A+ A+ +F M +T +P+ +T + +
Sbjct: 369 RMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSI 420
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
MR G+ SFT + KAC V D+ G +IH I+ G+ S ++V N+++ MY KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHG-LIIKCGYDSIVFVANSLVSMYAKCN 59
Query: 103 FLGCSRKVFDEMPER-DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
+ +RK+FD M ER DVVSW +I AY+ NG A GLF E
Sbjct: 60 DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFRE----------------- 102
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN 221
MQ AGV + TLV + AC K + S + +
Sbjct: 103 --------------MQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKS--NQVLD 146
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V V +AL+ M+ + G + A RIF + +++ +++SMI GF +G + A+Q F +
Sbjct: 147 VYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQD 206
Query: 282 TETKPNGVTFIGVLTACSHVG 302
KP+ V+ I +L A +G
Sbjct: 207 ANLKPDEVSLISILAASGRLG 227
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 323/545 (59%), Gaps = 31/545 (5%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W L+ G+ L G+ ++ +++ M+ EG P S +++++ +A +E+ +++G++ H +
Sbjct: 879 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY-V 937
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L GF D+YVG ++I MYVK L ++ VFD M R++ +W L+ Y+ G E A
Sbjct: 938 LRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 997
Query: 140 GLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
L N++ + D V W M++GY R+A + ++ ++ AC
Sbjct: 998 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM-----------PNSASITCLLRAC 1046
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
A L +++ + ++ +GF I +V V +ALIDMYSK S+ +A+++F ++ + + S
Sbjct: 1047 ASLSLLQKGKEIHCLSIRNGF--IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 1104
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------ 303
++ MI+GFA+ G AI +F +M K P+ +TF +L+AC + GL
Sbjct: 1105 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 1164
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
Y + P +HY CMVDLLGRAG L+EA ++ MP++P+ +WGALLG+C+IH+N A
Sbjct: 1165 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFA 1224
Query: 364 QIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRG 423
+ AA +LF+LEP+ NYI++ N+Y+ W+D+ +R L+ G++ +SW++ ++
Sbjct: 1225 ETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQR 1284
Query: 424 VIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEK 483
V H F + + HP++ +I L L+ ++ GY P++ V ++ + EK++IL++H+EK
Sbjct: 1285 V-HVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEK 1343
Query: 484 LALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
LA+ +GL+ G +R++KN RIC DCH S V RE+ +RD +RFHHF++GKCS
Sbjct: 1344 LAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCS 1403
Query: 544 CGNYW 548
C ++W
Sbjct: 1404 CNDFW 1408
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 7/316 (2%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ LW I + L+ + L+ M+ + + T+ + +AC ++
Sbjct: 731 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 790
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++ +QIH G SD+ + N +I MY K G L +R+VFD M R+ SW +I
Sbjct: 791 LNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849
Query: 128 AYANNGDMESAGGLFNELPLKDK----VAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+YA G + A LF EL D V W +++G+ + E + +RMQ G +
Sbjct: 850 SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 909
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ ++ V+ A ++LG + +GF +V VG++LIDMY K S+ A
Sbjct: 910 NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD--CDVYVGTSLIDMYVKNHSLXSAQA 967
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F MK RN+F+++S++ G++ G A++L M K KP+ VT+ G+++ + G
Sbjct: 968 VFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGC 1027
Query: 304 KCYGVSPSTDHYACMV 319
P++ C++
Sbjct: 1028 ARKAFMPNSASITCLL 1043
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 35/283 (12%)
Query: 15 KNPFLWTALIRGYILQ-GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+N W + + + G L + ++ + +G+ S S K CT V+D+ LG +
Sbjct: 636 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 695
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
IH ++ GF D+Y+ ++ Y +C W
Sbjct: 696 IHG-CLIKRGFDLDVYLRCALMNFYGRC--------------------W----------- 723
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
+E A +F+E+P + + W + +Q+ K ++ +E F +MQ++ ++ + T+V V+
Sbjct: 724 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 783
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
AC ++G + A + FG ++V + + LI MYSK G ++ A R+F M+ RN
Sbjct: 784 ACGKMGALNAAKQIHGYV--FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 841
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S++SMI +A G + A LF ++ ++ KP+ VT+ +L+
Sbjct: 842 SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 884
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 33/274 (12%)
Query: 101 CGFLGCSRKVFDEMPER---DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMV 157
CG LG V ++P++ D + LI +Y GD SA +F ++ + W + V
Sbjct: 589 CGMLGAL--VMIKLPQKWNPDAAA-KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFV 645
Query: 158 TGYVQNAKPRE-AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV------CEI 210
+ +A +E F+ + GV D + C ++ I W+ C I
Sbjct: 646 EEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDI----WLGMEIHGCLI 701
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
G +V + AL++ Y +C ++ A ++F M ++ I+ +
Sbjct: 702 KRGFDL----DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQ 757
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMV 319
++LF M + K T + VL AC +G + +G+ ++
Sbjct: 758 KGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLI 817
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + G LE A ++ + M N W +++ +
Sbjct: 818 SMYSKNGKLELARRVFDSME-NRNTSSWNSMISS 850
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ K W +I G+ + G K++IS++ M++ G+GP + T +AL AC
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 1152
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
+ G + I L M+ + + G+L + + MP + D W L+
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 319/561 (56%), Gaps = 50/561 (8%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFK 60
D + +F+++ K+ W +L+ G +G+L ++ +C MR E G P TL ++
Sbjct: 113 DEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVS 172
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC ++ + G+ +H + LG + V N++I MY K GFL
Sbjct: 173 ACADMGALDEGKSLHGVVVKLG-MSGKAKVVNSLINMYGKLGFL---------------- 215
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++A LF E+P++ V+W +MV + N + ++ F M+ AG
Sbjct: 216 ---------------DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 260
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+V ++ AC G+ + A + GF ++++ +AL+++Y+K G ++
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA--DIIIATALLNLYAKLGRLNA 318
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ IF +K R+ ++++M+ G+A+H AI+LF MVK + + VTF +L+ACSH
Sbjct: 319 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 378
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + Y V P DHY+CMVDLLGR+G LE+A ++++ MP+EP+ GVWG
Sbjct: 379 SGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWG 438
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+++ N E+ + A L L+P NYI+LSNIY++AG+W D S+VR L+K
Sbjct: 439 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 498
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L +NPG S++E G++ IH F GD HP S EI L +L+ +++ G P VL+D
Sbjct: 499 LTRNPGCSFIEHGNK--IHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHD 556
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +E K ++ HSEKLA+AFGLL T G + I KNLRIC DCH AS + R I+
Sbjct: 557 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 616
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD+ RFHHF DG CSC +YW
Sbjct: 617 IRDSKRFHHFADGLCSCRDYW 637
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ +L A + VS IHA+ I + SD ++G+ ++ MY K G+ ++++FDEM
Sbjct: 65 VQSLVFAISSCTSVSYCSAIHARVIKSLNY-SDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P +D+VSW L+ + G + G NA R E
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYL-----------------------GACLNAFCRMRTE--- 157
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+G + + VTL+ V+SACA +G + + + G VV ++LI+MY K
Sbjct: 158 ----SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV--NSLINMYGK 211
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D A ++F M R++ S++SM++ +G A + LF M + P+ T + +
Sbjct: 212 LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 271
Query: 295 LTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKMPVEPN 343
L AC+ GL S + C +++L + G L + + E++ + +
Sbjct: 272 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRD 330
Query: 344 GGVWGALLGACQIH 357
W A+L +H
Sbjct: 331 RIAWTAMLAGYAVH 344
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 326/627 (51%), Gaps = 84/627 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R VF+++ ++ LW +I G + DS+ ++ M +G+ S T++ + A
Sbjct: 155 AYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAV 214
Query: 63 TEV--LDVSLGQQ-------IHAQTILLGGFTS---------------------DLYVGN 92
E+ + V +G Q H +L G S DL N
Sbjct: 215 AEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYN 274
Query: 93 TMIGMYVKCGFLGCSRKVFDEM---PERDVVSW--------------------------- 122
+I + G C+ K F E+ +R S
Sbjct: 275 ALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKS 334
Query: 123 ---------TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
T L Y+ +++ A LF+E K AW AM++GY Q+ AI F
Sbjct: 335 GTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLF 394
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+ M + VT+ ++SACAQLG + + V ++ + N+ V +ALIDMY+
Sbjct: 395 QEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLE--QNIYVSTALIDMYA 452
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG+I +A ++F ++N ++++MI G+ +HG A++LF +M+ +P+ VTF+
Sbjct: 453 KCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLS 512
Query: 294 VLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
VL ACSH GL Y + P +HYACMVD+LGRAG LE+AL+ + KMPVE
Sbjct: 513 VLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVE 572
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P VWG LLGAC IH++ +A++A+ LFEL+P +G Y++LSNIY+ + + VR
Sbjct: 573 PGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVR 632
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
+K L K PG + +E + G H F GD +H +T I L +L +++ GYQ
Sbjct: 633 EAVKKRNLSKTPGCTLIEVN-GTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSET 691
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
+ L+DV +EEK+ + HSEKLA+AFGL+TT PG +RI+KNLR+C DCH S++
Sbjct: 692 VTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKI 751
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
R IVVRD RFHHF+DG CSCG+YW
Sbjct: 752 TERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 42/304 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R +F V + FL+ LI+G+ SIS Y + + + P +FT + A
Sbjct: 60 RALFFSVPKPDIFLFNVLIKGFSFSPD-ASSISFYTHLLKNTTLSPDNFTYAFAISASP- 117
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
D +LG +HA ++ GF S+L+V + ++ +Y K + +RKVFD+MP+RD V
Sbjct: 118 --DDNLGMCLHAHAVV-DGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTV---- 170
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
W M+TG V+N ++++ F+ M GV D
Sbjct: 171 ---------------------------LWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ V+ A A++ +K + +A GF + V+ G LI ++SKC +D A +
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG--LISVFSKCEDVDTARLL 261
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---HV 301
F +++ ++ SY+++I GF+ +G A++ F +++ + + + T +G++ S H+
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321
Query: 302 GLKC 305
L C
Sbjct: 322 HLAC 325
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 307/549 (55%), Gaps = 47/549 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
++E + ++ W A + G G ++++ M EG P +T ++ +C+ + D
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+Q+HA I+ + +V +I MY KC +L
Sbjct: 532 VHYGRQVHAH-IIKNQLDDNNFVCTALIDMYAKCMYL----------------------- 567
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A FN L ++D WT ++T Y Q + +A+ YF +MQ GV+ + T
Sbjct: 568 --------EDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L G +S C+ L ++ + + SG ++++ VGSAL+DMY+KCG +++A +F
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGH--VSDMFVGSALVDMYAKCGCMEEAEALFEA 677
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +R+ +++++I G+A +G+ + A+ F M+ P+GVTF G+L+ACSH GL
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+SP+ DH ACMVD+LGR G +E ++KM + N +W +LGA +
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASK 797
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N + + AAN LFEL+P++ +YI+LSNI+A+ G WDDV RVR L+ G+KK PG
Sbjct: 798 MHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGC 857
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + G +H F + D +HP EI L +L L + Y P VL++V + EKK
Sbjct: 858 SWVEAN-GQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKE 916
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSE+LAL F L++TS +RI KNLRIC DCH M S + +EIVVRD RFH
Sbjct: 917 NLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFH 976
Query: 536 HFQDGKCSC 544
HF++G CSC
Sbjct: 977 HFKNGACSC 985
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 57/376 (15%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ RLV ++ ++ WTALI+G + +G DSI L+ M+ EGI P FTL+ KAC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + + LG+Q+HAQ L G DL+VG+ ++ +Y KCG + + K+F MPE++ V+W
Sbjct: 224 SLCMALDLGKQMHAQAFKL-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ YA GD VTG ++ F M V+
Sbjct: 283 NVLLNGYAQRGD----------------------VTG---------VLKLFCSMMELDVK 311
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ TL V+ CA +K + + G+ N +G L+DMYSKCG DA
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE--GNEFIGCGLVDMYSKCGLAIDAI 369
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F +K+ ++ +S++I G++ +I+LF M +T PN T +L+A ++ G
Sbjct: 370 GVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429
Query: 303 LKCYGVSPSTDHYAC---------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
YG S +AC +V + + GC+ + K+ E M V+ + W
Sbjct: 430 NLQYGQSI----HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISW 484
Query: 348 GALLGA---CQIHRNP 360
A L C ++ P
Sbjct: 485 NAYLSGLHDCGMYDRP 500
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 47/348 (13%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S++ + C + + + IH I+ D ++ +++ +Y KC + +R V +MP
Sbjct: 116 SSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+R D V+WTA++ G V ++I F+
Sbjct: 175 DR-------------------------------DVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
MQ G+ + TL + AC+ + + A+ G + ++ VGSAL+D+Y+KC
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQM--HAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G I+ A ++F+GM ++N +++ ++ G+A G ++LF M++ + K N T VL
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 296 TACSHV-GLKCYGVSPS---------TDHYAC-MVDLLGRAGCLEEALKMVEKMPVEPNG 344
C++ LK V S + C +VD+ + G +A+ + + + +P+
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDI 380
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
VW AL+ C + I HL L Y I S + A+
Sbjct: 381 VVWSALI-TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+ F ++ ++ F WT +I Y + +++ + M++EG+ P FTL+ C+ +
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ GQQ+H+ + G SD++VG+ ++ MY KCG + + +F+ + RD ++W +I
Sbjct: 632 SLEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTII 690
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
GY QN + +A+ F M G+ D V
Sbjct: 691 C-------------------------------GYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T G++SAC+ G+++ + FG V + ++D+ + G D+
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFN-SMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778
Query: 247 GMK-QRNVFSYSSMILGFAMHGR----AHAAIQLF 276
M+ +N + +++ MH AA +LF
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKAANKLF 813
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 315/564 (55%), Gaps = 53/564 (9%)
Query: 3 SFPRLVFEQVKYKNPFLW-TALIRGY-----ILQGHLKDSISLYCSMRREGIGPVSFTLS 56
++ R VF++V + +W L+RGY ++ ++ M EG+ P ++T
Sbjct: 78 AYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFV 137
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
+L KAC G+Q HA + LG D YV T+I MY +CG +R F
Sbjct: 138 SLLKACAAARAGEHGRQAHAVAVKLGAAGHD-YVRPTLINMYAECGDARAARVTFGRA-- 194
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+GD V++ AM+ V++++P EA+ F M
Sbjct: 195 ---------------DGDC--------------VVSYNAMIAAAVRSSRPGEALVLFREM 225
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
Q G+ VT++ V+SACA LG ++ W+ + G G + V V +AL+DMY+KCG
Sbjct: 226 QAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSL--VKVSTALVDMYAKCG 283
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
S++DA +F GM+ R+ ++S MI+ +A HG AI LF +M K KP+ +TF+G+L
Sbjct: 284 SLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLY 343
Query: 297 ACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
ACSH GL K +G+ P HY C+ DLL R+G LE A K ++++P+ P
Sbjct: 344 ACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPI 403
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W LL AC H + E+ + + EL+ G+Y+I SN+ A+ G W++++RVR+L+
Sbjct: 404 LWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMS 463
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
G+ K PG S +E D +HEF AGD HP S E ++ + +++D+L+ GY P+ V
Sbjct: 464 DKGVVKVPGCSSIEID-NTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVF 522
Query: 466 Y-DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+ ++ +EEK L HSEKLA+AFGLL T+PGAT+R++KNLR+C DCH S V R
Sbjct: 523 HVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNR 582
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF+ G CSCG+YW
Sbjct: 583 RIILRDLNRFHHFERGICSCGDYW 606
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 319/561 (56%), Gaps = 50/561 (8%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFK 60
D + +F+++ K+ W +L+ G +G+L ++ +C MR E G P TL ++
Sbjct: 170 DEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVS 229
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC ++ + G+ +H + LG + V N++I MY K GFL
Sbjct: 230 ACADMGALDEGKSLHGVVVKLG-MSGKAKVVNSLINMYGKLGFL---------------- 272
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++A LF E+P++ V+W +MV + N + ++ F M+ AG
Sbjct: 273 ---------------DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 317
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+V ++ AC G+ + A + GF ++++ +AL+++Y+K G ++
Sbjct: 318 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA--DIIIATALLNLYAKLGRLNA 375
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ IF +K R+ ++++M+ G+A+H AI+LF MVK + + VTF +L+ACSH
Sbjct: 376 SEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 435
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + Y V P DHY+CMVDLLGR+G LE+A ++++ MP+EP+ GVWG
Sbjct: 436 SGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWG 495
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+++ N E+ + A L L+P NYI+LSNIY++AG+W D S+VR L+K
Sbjct: 496 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 555
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L +NPG S++E G++ IH F GD HP S EI L +L+ +++ G P VL+D
Sbjct: 556 LTRNPGCSFIEHGNK--IHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHD 613
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +E K ++ HSEKLA+AFGLL T G + I KNLRIC DCH AS + R I+
Sbjct: 614 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 673
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD+ RFHHF DG CSC +YW
Sbjct: 674 IRDSKRFHHFADGLCSCRDYW 694
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ +L A + VS IHA+ I + SD ++G+ ++ MY K G+ ++++FDEM
Sbjct: 122 VQSLVFAISSCTSVSYCSAIHARVIKSLNY-SDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P +D+VSW L+ + G + G NA R E
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYL-----------------------GACLNAFCRMRTE--- 214
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+G + + VTL+ V+SACA +G + + + G VV ++LI+MY K
Sbjct: 215 ----SGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV--NSLINMYGK 268
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D A ++F M R++ S++SM++ +G A + LF M + P+ T + +
Sbjct: 269 LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 328
Query: 295 LTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKMPVEPN 343
L AC+ GL S + C +++L + G L + + E++ + +
Sbjct: 329 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRD 387
Query: 344 GGVWGALLGACQIH 357
W A+L +H
Sbjct: 388 RIAWTAMLAGYAVH 401
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 308/558 (55%), Gaps = 47/558 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ +F + N F+W +IRGY + +I+LY M GI P S+T + AC
Sbjct: 18 AYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNAC 77
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++L + GQ++H+Q I+ G + + N +I +Y CG
Sbjct: 78 CKLLRLCEGQELHSQ-IVKAGLDFETPLLNGLIKLYAACGC------------------- 117
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
M+ A +F+E+P D +W+ MV+GY QN + E ++ MQ V
Sbjct: 118 ------------MDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVS 165
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+D TL V+ C LGV+ WV + G +VV+G+AL+ MYSKCGS+D+A
Sbjct: 166 SDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKI--DVVLGTALVGMYSKCGSLDNAL 223
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F GM +R+V ++S MI G+A+HG A+QLF M +++ PN VTF VL+A SH G
Sbjct: 224 KVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSG 283
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L Y ++P HY CMVDL RAG + A K ++ MP+EPN +W L
Sbjct: 284 LVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTL 343
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC+ H + + + + +L+P NY+ +SN+YAS G W V +VR L+K K
Sbjct: 344 LGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPK 403
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K G+S +E + ++H+F G+ +HP +I L + +L+ G+ + VL+D+ +
Sbjct: 404 KQHGWSSIEINF-MVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVDVLHDIDE 462
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+ L HSE+LA+A+GLL T G+ +RI+KNLR C DCH + S+V REI++RD
Sbjct: 463 EEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNREIILRD 522
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ FHHF++ CSC +YW
Sbjct: 523 RVCFHHFRERGCSCNDYW 540
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A+ IF N+F ++++I G+++ +AI L+ DM PN TF VL
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 296 TACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
AC H + G+ T ++ L GC++ A M ++MP EP+
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMP-EPDS 133
Query: 345 GVWGALL 351
W ++
Sbjct: 134 ASWSTMV 140
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 319/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + ++ WT ++ G+ G +++ ++ MR +GI +T ++ AC +
Sbjct: 226 RRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGAL 285
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA I+ + +++VG+ ++ MY KC + + VF M ++++S
Sbjct: 286 SALEQGKQIHAY-IIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS---- 340
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
WTA++ GY QN EA+ F MQ G++ D
Sbjct: 341 ---------------------------WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VIS+CA L ++ +A SG ++ + V +AL+ +Y KCGSI+DA+R+F
Sbjct: 374 YTLGSVISSCANLASLEEGAQFHCLALVSGL--MHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M + S+++++ G+A GRA I LF M+ KP+GVTFIGVL+ACS G
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P DHY CM+DL R+G L+EA + +++MP+ P+ WG LL A
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EI + AA +L E++P +Y++L +++A+ G W++V+++RR ++ +KK P
Sbjct: 552 CRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEP 611
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F A D +HP S I + L L ++ +GY+P++ SVL+DV+D +K
Sbjct: 612 GCSWIKY-KNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ HSEKLA+AFGL+ +RI+KNLR+C DCH S++ GR+I+VRD +R
Sbjct: 671 VHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 730
Query: 534 FHHFQDGKCSCGNYW 548
FH F DG CSCG++W
Sbjct: 731 FHKFSDGVCSCGDFW 745
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 202/393 (51%), Gaps = 19/393 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACTEV 65
+F + ++ + A+I G+ G ++ +Y ++ + + P T+S + A + +
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D +LG+Q H Q + LG F ++ +VG+ ++ MY K +G +++ FDE+ ++VV + +
Sbjct: 154 GDRALGKQFHCQILRLG-FGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTM 212
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +E A LF + +D + WT MVTG+ QN EA+E F RM++ G+ D
Sbjct: 213 ITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQ 272
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++AC L ++ + + + +NV VGSAL+DMYSKC SI A +F
Sbjct: 273 YTFGSILTACGALSALEQGKQIHAYIIRTRYD--DNVFVGSALVDMYSKCRSIKLAETVF 330
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M +N+ S++++I+G+ +G + A+++F +M + P+ T V+++C+++
Sbjct: 331 RRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE 390
Query: 303 ----LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
C + HY +V L G+ G +E+A ++ ++M W AL+ G
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVSGY 449
Query: 354 CQIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q R E + L + ++PD + +LS
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 11/258 (4%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P+S +AL A + + +H + Y+ N ++ Y K G +R+
Sbjct: 4 PLSSQYAALLSAAART-EPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARR 62
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD MP ++ ++ L+ A+ + LF + +D V++ A++ G+ +A
Sbjct: 63 VFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQA 122
Query: 170 IE-YFERMQY-AGVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGS 226
+ Y +Q + V +T+ ++ A + LG + C+I GFG N VGS
Sbjct: 123 VRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILR-LGFGA--NAFVGS 179
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
L+DMY+K + DA R F + +NV Y++MI G A +LF M T
Sbjct: 180 PLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVM----TDR 235
Query: 287 NGVTFIGVLTACSHVGLK 304
+ +T+ ++T + GL+
Sbjct: 236 DSITWTTMVTGFTQNGLE 253
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/562 (36%), Positives = 315/562 (56%), Gaps = 58/562 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGY--ILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
S+ R VF ++ + + +IR + H S+S + SMR GI +FT + K
Sbjct: 39 SYARYVFSRIPSPDTIAYNTIIRSHSRFFPSH---SLSYFFSMRSNGIPLDNFTFPFVLK 95
Query: 61 ACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
AC+ L +H ++++ G SD++V N +I +Y CG
Sbjct: 96 ACSR-----LQINLHLHSLIVKYGLGSDIFVQNALICVYGYCG----------------- 133
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+E A +F+E+ +D V+W+ ++ ++ N EA++ FE+MQ
Sbjct: 134 --------------SLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Query: 180 G-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V D VT++ VISA + LG ++ WV GFG +V +G+ALIDM+S+CGSI
Sbjct: 180 DKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGV--SVALGTALIDMFSRCGSI 237
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D++ +F M RNV +++++I G +HGR+ A+ +F M K+ +P+ VTF GVL AC
Sbjct: 238 DESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVAC 297
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL K YG+ P DHY CMVD+LGRAG L EA VE+MP++PN +
Sbjct: 298 SHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSII 357
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LLGAC H N +A+ + ++ + G+ ++LSN+Y +AG W + + +R ++
Sbjct: 358 WRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMRE 417
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+ K PG S + D+ IHEF +GD +HP S +I + L ++ L+ GY ++VL+
Sbjct: 418 KRIGKEPGCSSINVDQ-TIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLH 476
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ +EE++ L HSEKLA+AF +L+ T+RIMKNLRIC DCH FM S R+I
Sbjct: 477 DIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKI 536
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
++RD RFHHF+ G CSC +YW
Sbjct: 537 IIRDRNRFHHFEKGLCSCHDYW 558
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 306/543 (56%), Gaps = 51/543 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ G+ + + ++++ L+ M G T + KA ++ + G+QIHA I
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ F DL+V + ++ MY+KCG +M+SA
Sbjct: 528 KMR-FHYDLFVISGILDMYLKCG-------------------------------EMKSAR 555
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+FN++P D VAWT +++G V+N + +A+ + +M+ AGV+ D T ++ AC+ L
Sbjct: 556 KVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLT 615
Query: 200 VIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
++ + + F P V ++L+DMY+KCG+I+DAY +F M R+V ++
Sbjct: 616 ALEQGKQIHANIMKLNCAFDPF----VMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWN 671
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
+MI+G A HG A A+ F +M P+ VTFIGVL+ACSH GL K
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKT 731
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
YGV P +HY+C+VD L RAG ++EA K+V MP E + ++ LL AC++ + E +
Sbjct: 732 YGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGER 791
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
A LF ++P Y++LSNIYA+A W++ R ++K +KK PG+SW++ + +
Sbjct: 792 VAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDM-KNKV 850
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H F AGD +H + I + ++ R++ +GY P+ L D+ +E+K+ L HSEKLA
Sbjct: 851 HLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLA 910
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+A+GL+ T P T+R++KNLR+C DCH + S V REIV+RD RFHHF+ G CSCG
Sbjct: 911 IAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCG 970
Query: 546 NYW 548
+YW
Sbjct: 971 DYW 973
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF Q+ + WT +I G + G + ++ Y MR G+ P +T + L KAC+ +
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL 614
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA + L D +V +++ MY KCG
Sbjct: 615 TALEQGKQIHANIMKLNC-AFDPFVMTSLVDMYAKCG----------------------- 650
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E A GLF + + W AM+ G Q+ EA+ +F M+ GV D
Sbjct: 651 --------NIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 186 VTLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT +GV+SAC+ G+ Y N+ + + G P + S L+D S+ G I +A +
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFD-SMQKTYGVEP--EIEHYSCLVDALSRAGHIQEAEK 759
Query: 244 IFVGM 248
+ M
Sbjct: 760 VVSSM 764
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 161/375 (42%), Gaps = 68/375 (18%)
Query: 20 WTALIRGYILQGHLKD------SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+ A++ Y G L D + ++ +R+ + TLS LFK C S +
Sbjct: 84 YNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEA 143
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+ + +G D++V ++ +Y K + +R +FD MP RDVV W ++ AY G
Sbjct: 144 LQGYAVKIG-LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG 202
Query: 134 DMESAGGLFN---------------------------ELPLK----------------DK 150
+ GLF+ E L+ D
Sbjct: 203 AGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDV 262
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
W ++ Y+Q + EA++ F M + V D +T + ++S A L ++ +
Sbjct: 263 TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI--- 319
Query: 211 AEGS--GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
G+ FG V V ++ I+MY K GS++ A R+F MK+ ++ S++++I G A G
Sbjct: 320 -HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH------VGLKCY------GVSPSTDHYA 316
+++LF D++++ P+ T VL ACS VG + + G+ +
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVST 438
Query: 317 CMVDLLGRAGCLEEA 331
++D+ + G +EEA
Sbjct: 439 ALIDVYSKGGKMEEA 453
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 49/397 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F Q+K + W +I G G + S+ L+ + R G+ P FT++++ +AC
Sbjct: 349 NYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC 408
Query: 63 TEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + + +G+Q+H L G D +V +I +Y K
Sbjct: 409 SSLEESYCVGRQVHT-CALKAGIVLDSFVSTALIDVYSK--------------------- 446
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
G ME A LF+ D +W AM+ G+ + REA+ F M G
Sbjct: 447 ----------GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE 496
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D +T A L ++ + + F ++ V S ++DMY KCG + A
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFH--YDLFVISGILDMYLKCGEMKSA 554
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
++F + + +++++I G +G A+ + M +P+ TF ++ ACS
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL 614
Query: 300 ---------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
H + + +VD+ + G +E+A + +M + +W A+
Sbjct: 615 TALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAM 673
Query: 351 LGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILS 385
+ H N E A N + + PD++ +LS
Sbjct: 674 IVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLS 710
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 51/350 (14%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W + Y+ G +++ + M + + S T + + + LG+QIH
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
+ G + + V N+ I MYVK G + +R++F +M E D++SW +I A +G E +
Sbjct: 324 VRFG-WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECS 382
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF +L +G+ D T+ V+ AC+ L
Sbjct: 383 LRLFIDL-------------------------------LRSGLLPDQFTITSVLRACSSL 411
Query: 199 G---VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
+ C + G + + V +ALID+YSK G +++A +F ++ S
Sbjct: 412 EESYCVGRQVHTCALKA----GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKCYGVSP 310
+++M+ GF + A++LF M + K + +TF A G + + V
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 311 STD-HYACMV-----DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
HY V D+ + G ++ A K+ ++P P+ W ++ C
Sbjct: 528 KMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC 576
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 37 ISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIG 96
+S CS+ + P F++ + D+ LG++ HA I+ G D YV N +I
Sbjct: 1 MSRKCSVSPSSLLPQWFSI---LRHAIADSDLILGKRTHA-VIVTSGLNPDRYVTNNLIT 56
Query: 97 MYVKCGFLGCSRKVFDEMPE--RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
MY KCG L +RK+FD P+ RD+V++ ++ AYA+ G++
Sbjct: 57 MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDV---------------- 100
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
K EA F ++ + + T TL + C G + E +G
Sbjct: 101 ---------EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG----SPSASEALQGY 147
Query: 215 G--FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
G +V V AL+++Y+K I +A +F M R+V ++ M+ + G
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207
Query: 273 IQLFGDMVKTETKPNGVTFIGVL 295
+ LF ++ +P+ V+ +L
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTIL 230
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 311/536 (58%), Gaps = 48/536 (8%)
Query: 26 GYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFT 85
GY G L++++ +Y M + P +F S KAC ++ ++ +G+ +HAQ ++
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQ-VVKSSEG 62
Query: 86 SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL 145
D V N ++ +Y +C KVFD+MPER+V S
Sbjct: 63 PDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVAS------------------------ 98
Query: 146 PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN 205
W ++++G+V+ K EA++ F RMQ G+ +VTL ++ CA++ +
Sbjct: 99 -------WNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGK 151
Query: 206 WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
+ S P +V+V ++L+DMY KCG +D R+F GM+ +++ S+++M+ G+A+
Sbjct: 152 EIHAQIVKSARRP--DVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAI 209
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK------------CYGVSPSTD 313
+G A+ LF +M +P+ VTFI +L+ CSH GL +GVSPS +
Sbjct: 210 NGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLE 269
Query: 314 HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL 373
HYAC+VD+LGRAG ++ AL +V+ MP++ +G +WG+LL +C++H +A+ AN LFEL
Sbjct: 270 HYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFEL 329
Query: 374 EPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA-GD 432
EP GNY++LSNIYA+AGMWD V+ VR +++ ++K G SW++ + IH F A G
Sbjct: 330 EPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSWIQV-KNKIHSFVAGGG 388
Query: 433 LTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLT 492
NS E ++ L + ++ GY PN VL+DV++E K + HSE+LA F L+
Sbjct: 389 FEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIH 448
Query: 493 TSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
T+ G +RI KNLR+C DCH ++ S+V GR IV+RD RFHHF++G CSC +YW
Sbjct: 449 TAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 33/244 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+Q+ +N W +LI G++ + L +++ ++ M+REG+G TL+ + C V
Sbjct: 87 VFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTA 146
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IHAQ I+ D+ V N+++ MYVKCG + R++FD M +D+ SW ++
Sbjct: 147 LLSGKEIHAQ-IVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLT 205
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA NG M A LFNE M G+ D VT
Sbjct: 206 GYAINGYMRVAMDLFNE-------------------------------MASCGIRPDDVT 234
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++S C+ G+ + + E FG ++ + L+DM + G ID A +
Sbjct: 235 FIALLSGCSHAGLTEDGQKLFHRME-MDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKN 293
Query: 248 MKQR 251
M +
Sbjct: 294 MPMK 297
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 17/264 (6%)
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M GY +N REA+ + M + +E + ACA L + V S
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
GP + VV + L+ +Y++C ++ ++F M +RNV S++S+I GF + A+ +
Sbjct: 61 EGP--DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDV 118
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVDLLGR 324
F M + + VT +L C+ V G P +VD+ +
Sbjct: 119 FRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVK 178
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYI 382
G ++ ++ + M + W +L I+ +A N + + PD + +I
Sbjct: 179 CGVVDYGRRLFDGMR-SKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDV-TFI 236
Query: 383 ILSNIYASAGMWDDVSRVRRLLKM 406
L + + AG+ +D ++ ++M
Sbjct: 237 ALLSGCSHAGLTEDGQKLFHRMEM 260
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F+ ++ K+ W ++ GY + G+++ ++ L+ M GI P T AL C+
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS-W 122
GQ++ + + G + L ++ M + G + + V MP + S W
Sbjct: 244 HAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIW 303
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVA 152
G + ++ L NE+PL + +A
Sbjct: 304 ----------GSLLNSCRLHNEVPLAEAIA 323
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/491 (38%), Positives = 293/491 (59%), Gaps = 17/491 (3%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+HA + +++D V +++I MY KCG +RKVFD + ++ V WT L+ YA
Sbjct: 30 GRQLHAH-FVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYA 88
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD-YVTLV 189
+NG A LF +P + AWTA+++G+V+ A+ F M+ GV D L
Sbjct: 89 SNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLA 148
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
V+ A+L + + A GF +++++VG+AL+DMYSKC I A +F G+
Sbjct: 149 TVVGGAAELAALVLGRQLHGFAITLGF--LSSMIVGNALVDMYSKCSDIHSAREVFGGII 206
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
R+V S++++++G A HGR + L+ M+ KPN VTF+G++ ACSH GL
Sbjct: 207 VRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQ 266
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ YG+ P HY C +DLL R+G L EA +++ MP EP+ WGALL AC+ H
Sbjct: 267 LFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKH 326
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
+ ++ A++L EL P YI+LSN+YA WD V++VR+++ ++K PGYSW
Sbjct: 327 NDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKEPGYSW 386
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
+E R F AG++ EI + L +L+ ++ GY P+ SV++D+ + EK++ L
Sbjct: 387 IEAGRES-RMFHAGEVPLDIGEEITRFLEELVSEMRKRGYVPDTSSVMHDLEENEKEQHL 445
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSE+LA+AFG+L + PG+ +R++KNLR+C DCH M S++ R+I+VRD RFHHF
Sbjct: 446 FLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISEIAQRKIIVRDASRFHHF 505
Query: 538 QDGKCSCGNYW 548
+DG CSC +W
Sbjct: 506 EDGNCSCSEFW 516
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 66/313 (21%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCS----------------------- 42
R VF+ + KN +WTAL+ GY G ++I L+ S
Sbjct: 66 RKVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNT 125
Query: 43 --------MRREGIG-PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
MRR+G+ +F L+ + E+ + LG+Q+H I L GF S + VGN
Sbjct: 126 GAVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVLGRQLHGFAITL-GFLSSMIVGNA 184
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
++ MY KC + +R+VF + RDVVSWT ++V A +G +E
Sbjct: 185 LVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHGRVE----------------- 227
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
E + ++RM AG++ + VT VG+I AC+ G+++ + + +
Sbjct: 228 --------------EVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKR 273
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAA 272
+G + + +D+ S+ G + +A + M + + S+ +++ H
Sbjct: 274 E-YGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDTQMC 332
Query: 273 IQLFGDMVKTETK 285
+++ ++++ K
Sbjct: 333 LRVADNLLELRPK 345
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 311/557 (55%), Gaps = 48/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
R +F + + W+A+I Y L G ++++ L+ MR +G + P + T + +F AC
Sbjct: 40 RAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGV 99
Query: 65 VLDVSLGQQIHAQTILLGGF-TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D+ G++IHA + G +S+ + N ++ MYV+CG L +RK
Sbjct: 100 IEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARK-------------- 145
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+F+ + D +WT+M+T +N + EA+E F RM G+
Sbjct: 146 -----------------VFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPP 188
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VTL V++ACA G +K + + SGF ++V+ +AL+DMY+KCGS++ + +
Sbjct: 189 TSVTLASVLNACACSGALKVGKQIHSRLDASGFH--SSVLAQTALLDMYAKCGSLECSSK 246
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M+ RN S+++MI A HG+ A++LF +M + TFI VL ACSH GL
Sbjct: 247 VFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGL 306
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y ++P+ HY +D +GRAG L++A +++ MP P W LL
Sbjct: 307 IKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLL 366
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH E A A L +L P+ Y +L N+YA+ G + D RVR+ + GLKK
Sbjct: 367 NACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKK 426
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG S++E + +HEF AGD HP+ EI L L R++ GY PN + VL+ V++E
Sbjct: 427 VPGKSFIEV-KNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEE 485
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK++++ HSEKLA+AFGL+ T PG + I+KNLR+C DCH ++++ R IVVRD
Sbjct: 486 EKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDT 545
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG+CSC +YW
Sbjct: 546 HRFHHFEDGQCSCKDYW 562
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
+ + L+ MY+KCG +D+A IF G+ +R V S+S+MI +A+HGR A+ LF M
Sbjct: 20 TIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRN 79
Query: 282 T-ETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA--------CMVDLLGRAGC 327
+PN +TF GV AC + G + + ++ ++ ++++ R G
Sbjct: 80 DGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGS 139
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGAC 354
LEEA K+ + M P+ W +++ AC
Sbjct: 140 LEEARKVFDTMD-HPDAFSWTSMITAC 165
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 313/556 (56%), Gaps = 53/556 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N WT +I Y ++ M REG+ P +T S++ +AC +
Sbjct: 71 RNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGL 130
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L++ +Q+H +IL G SD++V + +I Y K
Sbjct: 131 LNL---RQLHG-SILKVGLESDVFVRSALIDTYSKL------------------------ 162
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
G+ A +FNE+ D V W +++ G+ QN+ E + ++RM+ A D
Sbjct: 163 -------GEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL V+ AC L +++ V ++++ +AL+DMY KCGS++DA +F
Sbjct: 216 STLTSVLRACTGLALLELGRQV----HVHVLKYDQDLILNNALLDMYCKCGSLEDANLLF 271
Query: 246 VGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
M +++V S+S+MI G A +G + A++LF M KPN +T +GVL ACSH GL
Sbjct: 272 TRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLV 331
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G+ P +HY C++DLLGRAG L+EA+K++ +M EP+ W LLG
Sbjct: 332 NDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLG 391
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H+N ++A AA + +L+P G YI+LSNIYA++ W+DV+ VRR ++ G+KK+
Sbjct: 392 ACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKD 451
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E + V H F GD +HP EI++ L L+ RL GY P+ VL D+ E+
Sbjct: 452 PGCSWIEVSKQV-HAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQ 510
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
+ L HSEKLA+ FGL++ T+ I KNLRIC DCH+F SQ+ R IV+RD +
Sbjct: 511 MEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPI 570
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+ G CSCG+YW
Sbjct: 571 RYHHFRGGVCSCGDYW 586
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 46/320 (14%)
Query: 42 SMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC 101
+M R + + T S L K C V + +H + + G+ ++ NT+I MYVK
Sbjct: 6 AMHRNRLSADAITYSELIKCCLVRGAVQQARLVH-EHVFSNGYEPKTFLINTLINMYVKF 64
Query: 102 GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
G L + A LF+E+P ++ V+WT M++ Y
Sbjct: 65 GLL-------------------------------DEARNLFDEMPDRNVVSWTTMISAYS 93
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN 221
+ +A+++ M GV + T V+ AC G++ I + G ++
Sbjct: 94 NSNLNHKALDFLILMLREGVRPNMYTYSSVLRACD--GLLNLRQLHGSILK---VGLESD 148
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V V SALID YSK G DA +F M ++ ++S+I GFA + + L+ M +
Sbjct: 149 VFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKR 208
Query: 282 TETKPNGVTFIGVLTACSHVGLKCYG--VSPSTDHY-------ACMVDLLGRAGCLEEAL 332
+ + T VL AC+ + L G V Y ++D+ + G LE+A
Sbjct: 209 ADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDAN 268
Query: 333 KMVEKMPVEPNGGVWGALLG 352
+ +M E + W ++
Sbjct: 269 LLFTRMMTEKDVISWSTMIA 288
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
++ E M + D +T +I C G ++ A V E +G+ P ++ + LI
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLI--NTLI 58
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
+MY K G +D+A +F M RNV S+++MI ++ H A+ M++ +PN
Sbjct: 59 NMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118
Query: 290 TFIGVLTACS--------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
T+ VL AC H + G+ + ++D + G +AL + +M +
Sbjct: 119 TYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-IT 177
Query: 342 PNGGVWGALLG 352
+ VW +++G
Sbjct: 178 GDLVVWNSIIG 188
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 314/546 (57%), Gaps = 35/546 (6%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R VF + +N WT LI G G D+++L+ MR+ + FTL+ + C
Sbjct: 326 ALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVC 385
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + G+ +H I G S + VGN +I MY +CG + F MP RD +SW
Sbjct: 386 SGQNYAATGELLHGYAIK-SGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISW 444
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T +I A++ NGD++ A F+ +P ++ + W +M++ Y+Q+ E ++ + M+ V+
Sbjct: 445 TAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVK 504
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D+VT I ACA L IK V ++ + FG ++V V ++++ MYS+CG I +A
Sbjct: 505 PDWVTFATSIRACADLATIKLGTQV--VSHVTKFGLSSDVSVANSIVTMYSRCGQIKEAR 562
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F + +N+ S+++M+ FA +G + AI+ + DM++TE KP+ ++++ VL+
Sbjct: 563 KVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS------ 616
Query: 303 LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
DLLGRAG L++A +++ MP +PN VWGALLGAC+IH + +
Sbjct: 617 -----------------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSIL 659
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
A+ AA L EL + G Y++L+NIYA +G ++V+ +R+L+K+ G++K+PG SW+E D
Sbjct: 660 AETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDN 719
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
V H F + +HP E+ L +++ +++ G ++ S + R HSE
Sbjct: 720 RV-HVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAH--------RSQKYHSE 770
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA AFGLL+ P +++ KNLR+C DCHL + S V RE+++RD RFHHF+DG C
Sbjct: 771 KLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFC 830
Query: 543 SCGNYW 548
SC +YW
Sbjct: 831 SCRDYW 836
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 29/391 (7%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS----FTLSA 57
D P +V + V WT +I GY G SI + SM R+ + F+ +
Sbjct: 94 DEMPHIVRDSVS------WTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTC 147
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
KAC + Q+HA I L + + N+++ MY+KCG + + VF +
Sbjct: 148 TMKACGCLASTRFALQLHAHVIKLH-LGAQTCIQNSLVDMYIKCGAITLAETVFLNIESP 206
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+ W +I Y+ A +F +P +D V+W +++ + Q + F M
Sbjct: 207 SLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMC 266
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G + +++T V+SACA + +K+ + A + +GS LIDMY+KCG
Sbjct: 267 NLGFKPNFMTYGSVLSACASISDLKWGAHL--HARILRMEHSLDAFLGSGLIDMYAKCGC 324
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ A R+F + ++N S++ +I G A G A+ LF M + + T +L
Sbjct: 325 LALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGV 384
Query: 298 CSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CS L Y + D + ++ + R G E+A MP+
Sbjct: 385 CSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTIS- 443
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDK 377
W A++ A +N +I + A F++ P++
Sbjct: 444 WTAMITA--FSQNGDIDR--ARQCFDMMPER 470
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 52/331 (15%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
+ +++HAQ ++L G + L++ N ++ MY CG + + +VF E ++ +W ++ A+
Sbjct: 22 IARKLHAQ-LILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAF 80
Query: 130 ANNGDMESAGGLFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERM----QYAGVET 183
++G M A LF+E+P ++D V+WT M++GY QN P +I+ F M +
Sbjct: 81 FDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNC 140
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D + + AC L ++A + G + ++L+DMY KCG+I A
Sbjct: 141 DPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGA--QTCIQNSLVDMYIKCGAITLAET 198
Query: 244 IFVGMKQRNVFSYSSMILG-------------------------------FAMHGRAHAA 272
+F+ ++ ++F ++SMI G F+ +G
Sbjct: 199 VFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRC 258
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTAC---------SHVGLKCYGVSPSTDHY--ACMVDL 321
+ F +M KPN +T+ VL+AC +H+ + + S D + + ++D+
Sbjct: 259 LSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDM 318
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ GCL A ++ + E N W L+
Sbjct: 319 YAKCGCLALARRVFNSLG-EQNQVSWTCLIS 348
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 318/543 (58%), Gaps = 25/543 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L+ Q ++ WT+LI Y ++++ + +M GI P T+ A+ AC ++
Sbjct: 193 QLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM-----PERDVV 120
D+ LG+ +H G TS+ V +I MY KCG G +++VFD + P+
Sbjct: 253 KDLELGRSLHLLVEEKGMPTSENLV-VALIDMYAKCGDFGHAQQVFDALGRGPRPQ---- 307
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +I Y +G ++ A LF+E+ ++D + + +M+TGY+ + + REA+ F M+
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+V +++ACA LG ++ + E ++ +G+AL+DMY KCG +D+
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVE--ADIYLGTALLDMYMKCGRVDE 425
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M +R+V ++++MI G A +G AA++ F M +PN V++I VLTACSH
Sbjct: 426 ATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSH 485
Query: 301 VGLK------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
L Y + P +HY CM+DLLGR+G L+EA+ +V+ MP++PN +W
Sbjct: 486 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
++L AC++H++ ++AQ AA HL +LEPD+ G Y+ L NIY + W++ S++R L++
Sbjct: 546 SILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQ 605
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+KK GYS + G +H+F D +HP EI L ++ RL++ GY P + DV
Sbjct: 606 VKKTAGYSSITVA-GQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDV 664
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EEK++ L+ HSEKLA+AFGL+ +P V I KNLR+CEDCH + S++ REI+V
Sbjct: 665 DEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIV 724
Query: 529 RDN 531
RD
Sbjct: 725 RDR 727
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 37/299 (12%)
Query: 39 LYCSMRREGIGPVSFTLSALFKACTEVL---DVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
L+ MRR G+ P FT LFK + + L +HA + ++ +V N++I
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
MY++ G +R+ FDE+ +D V+WT LI A G + L ++ P++D ++WT+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
++ Y + + REA+ F+ M G+ D VT++ V+SACA+L ++ + + E G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 216 FGPINNVVVGSALIDMYSKCGS--------------------------------IDDAYR 243
N+VV ALIDMY+KCG +D A
Sbjct: 270 MPTSENLVV--ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARS 327
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+ R++ +++SM+ G+ G+ A+ LF M + + + + T + +LTAC+ +G
Sbjct: 328 LFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLG 386
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 304/552 (55%), Gaps = 47/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE +K K W LI + G ++++ L+ M+ +G+ P S++L++ AC +
Sbjct: 360 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 419
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG QIH I G F +V N +I MY KCGF+
Sbjct: 420 SQLGAQIHGYIIKTGNFND--FVQNALIDMYAKCGFV----------------------- 454
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
SA +F ++ K V W +M+ G+ QN EAI F++M V+ D +T
Sbjct: 455 --------HSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLT 506
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ VI AC+ LG ++ WV + +G + + +AL DMYSKCG + A+ +F
Sbjct: 507 FLSVIQACSHLGYLEKGKWVHH--KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 564
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
M +R++ S+S MI G+ MHG+ +A I LF M+ + KPN +TF+ +L+ACSH G
Sbjct: 565 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 624
Query: 303 ------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ +GV P DH+ACMVDLL RAG L A +++ +P N +WGALL C+I
Sbjct: 625 KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 684
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+ +I + +L +++ G Y +LSNIYA G WD +VR ++K GL+K PGYS
Sbjct: 685 HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 744
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E D+ I+ F GD +H + +I + L + + A Y + + S K+
Sbjct: 745 TIEIDKK-IYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENN 803
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
+++HSEKLA+AFG++ T PG T+RI KNLR+C DCH F AS++ GREI++RD RFH
Sbjct: 804 VVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHC 863
Query: 537 FQDGKCSCGNYW 548
F++G CSC +YW
Sbjct: 864 FRNGSCSCNDYW 875
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 48/371 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
+ VF+ + F+W LI+ Y+ G ++++SLY M + +S F ++ KAC+
Sbjct: 53 KRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSG 112
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
D+S+G ++H G +KCGF E D V T
Sbjct: 113 FGDLSVGGKVH--------------------GRVIKCGF------------ESDAVVETS 140
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ Y ++ A F+ +P++D VAW+++V +VQN + E ++ F +M VE D
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPD 200
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT++ V AC++LG ++ V +N + ++LI MY K G + A R+
Sbjct: 201 SVTMLSVTEACSELGSLRLGRSVHGYVVRREIE--SNASLNNSLIVMYGKLGDLYSAERL 258
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + R ++ MI + G A+ +F M + + +PN VT +GVL AC+ +G
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 305 CYGVS-----------PSTDHYA-CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G S P D +++L G L + K+ E + E W L+
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIK-EKTILSWNTLIS 377
Query: 353 ACQIHRNPEIA 363
+ PE A
Sbjct: 378 IFTRNGQPEEA 388
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 193/419 (46%), Gaps = 53/419 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F+ + ++ W++++ ++ G + + ++ M E + P S T+ ++ +AC+E+ +
Sbjct: 158 FDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSL 217
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+ +H + R++ E + LIV
Sbjct: 218 RLGRSVHGYVV---------------------------RREI-----ESNASLNNSLIVM 245
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y GD+ SA LF +P + WT M++ Y Q+ +EA+ F +MQ +E + VT+
Sbjct: 246 YGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTM 305
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
VGV+ ACA+LG +K V P + +G AL+++Y+ G++ D +++F +
Sbjct: 306 VGVLCACARLGRVKEGRSVHGFVIRRAMDPELD-FLGPALMELYADTGNLRDCHKVFETI 364
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----SHVGL 303
K++ + S++++I F +G+ A+ LF M P+ + L+AC S +G
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA 424
Query: 304 KCYGVSPSTDHY-----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
+ +G T ++ ++D+ + G + A KM EK+ E + W +++ C +
Sbjct: 425 QIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMI--CGFSQ 481
Query: 359 NPEIAQIAANHLFE---LEPDKIGNYIILSNIYASA--GMWDDVSRVRRLLKMTGLKKN 412
N + A LF+ + K+ LS I A + G + V L M GL+K+
Sbjct: 482 NG--YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKD 538
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 48/362 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE V + WT +I Y G +++++++ M+ + P T+ + AC +
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGR 317
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+ +H I R+ D PE D + L+
Sbjct: 318 VKEGRSVHGFVI----------------------------RRAMD--PELDFLG-PALME 346
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA+ G++ +F + K ++W +++ + +N +P EA+ F +MQ G+ D +
Sbjct: 347 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 406
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFV 246
L +SAC G I ++ +I G N N V +ALIDMY+KCG + A ++F
Sbjct: 407 LASSLSAC---GTISFSQLGAQI-HGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFE 462
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
+K++++ +++SMI GF+ +G + AI LF M K + +TF+ V+ ACSH+G
Sbjct: 463 KIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 522
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
L YG+ + + D+ + G L+ A + ++M E + W ++
Sbjct: 523 GKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYG 581
Query: 356 IH 357
+H
Sbjct: 582 MH 583
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTET 284
+ LI+ Y++ G + + R+F + + F + +I + G A+ L+ +MV + +T
Sbjct: 37 TKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQT 96
Query: 285 KPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
+ + F VL ACS G +KC G ++ + G CL++A
Sbjct: 97 QISNFVFPSVLKACSGFGDLSVGGKVHGRVIKC-GFESDAVVETSLLCMYGEMSCLDDAC 155
Query: 333 KMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE-LEPDKI 378
K + MP+ +L Q + E + + + E +EPD +
Sbjct: 156 KAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSV 202
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 304/552 (55%), Gaps = 47/552 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE +K K W LI + G ++++ L+ M+ +G+ P S++L++ AC +
Sbjct: 557 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 616
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG QIH I G F +V N +I MY KCGF+
Sbjct: 617 SQLGAQIHGYIIKTGNFND--FVQNALIDMYAKCGFV----------------------- 651
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
SA +F ++ K V W +M+ G+ QN EAI F++M V+ D +T
Sbjct: 652 --------HSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLT 703
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ VI AC+ LG ++ WV + +G + + +AL DMYSKCG + A+ +F
Sbjct: 704 FLSVIQACSHLGYLEKGKWVHH--KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 761
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
M +R++ S+S MI G+ MHG+ +A I LF M+ + KPN +TF+ +L+ACSH G
Sbjct: 762 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 821
Query: 303 ------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ +GV P DH+ACMVDLL RAG L A +++ +P N +WGALL C+I
Sbjct: 822 KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 881
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+ +I + +L +++ G Y +LSNIYA G WD +VR ++K GL+K PGYS
Sbjct: 882 HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 941
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E D+ I+ F GD +H + +I + L + + A Y + + S K+
Sbjct: 942 TIEIDKK-IYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENN 1000
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
+++HSEKLA+AFG++ T PG T+RI KNLR+C DCH F AS++ GREI++RD RFH
Sbjct: 1001 VVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHC 1060
Query: 537 FQDGKCSCGNYW 548
F++G CSC +YW
Sbjct: 1061 FRNGSCSCNDYW 1072
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 183/389 (47%), Gaps = 45/389 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
+ VF+ + F+W LI+ Y+ G ++++SLY M + +S F ++ KAC+
Sbjct: 400 KRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSG 459
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGN-----TMIGMYVKCGFLGC------------- 106
D+S+G + + L F+ + TM+ + C LG
Sbjct: 460 FGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGR 519
Query: 107 ------SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
R+ D PE D + L+ YA+ G++ +F + K ++W +++ +
Sbjct: 520 SVHGFVIRRAMD--PELDFLG-PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 576
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
+N +P EA+ F +MQ G+ D +L +SAC G I ++ +I G N
Sbjct: 577 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSAC---GTISFSQLGAQI-HGYIIKTGN 632
Query: 221 -NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
N V +ALIDMY+KCG + A ++F +K++++ +++SMI GF+ +G + AI LF M
Sbjct: 633 FNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 692
Query: 280 VKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCL 328
K + +TF+ V+ ACSH+G L YG+ + + D+ + G L
Sbjct: 693 YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGEL 752
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ A + ++M E + W ++ +H
Sbjct: 753 QMAHGVFDRMS-ERSIVSWSVMIAGYGMH 780
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 169/380 (44%), Gaps = 50/380 (13%)
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANN 132
Q+HA + + G +I Y + G S++VFD P+ D W LI Y
Sbjct: 366 QLHAH-LFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWG 424
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYV--------------QNAKPREAIEYFERMQY 178
G E A L++E+ +D+ + V V +N + E ++ F +M
Sbjct: 425 GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMIS 484
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV-----------GSA 227
VE D VT++ V AC++LG ++ + + EG ++ V+ G A
Sbjct: 485 EAVEPDSVTMLSVTEACSELGSLRLGR-LGRVKEGRS---VHGFVIRRAMDPELDFLGPA 540
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
L+++Y+ G++ D +++F +K++ + S++++I F +G+ A+ LF M P+
Sbjct: 541 LMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPD 600
Query: 288 GVTFIGVLTAC-----SHVGLKCYGVSPSTDHY-----ACMVDLLGRAGCLEEALKMVEK 337
+ L+AC S +G + +G T ++ ++D+ + G + A KM EK
Sbjct: 601 SYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEK 660
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE---LEPDKIGNYIILSNIYASA--G 392
+ E + W +++ C +N + A LF+ + K+ LS I A + G
Sbjct: 661 IK-EKSLVTWNSMI--CGFSQNG--YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLG 715
Query: 393 MWDDVSRVRRLLKMTGLKKN 412
+ V L M GL+K+
Sbjct: 716 YLEKGKWVHHKLIMYGLRKD 735
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 316/584 (54%), Gaps = 83/584 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ ++ F W ++ GY+ LK T ALF+
Sbjct: 13 LARDLFDKMPERDLFSWNVMLTGYVRNRDLK-------------------TARALFERMP 53
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
E D+ N M+ Y + GF+ +R++F +MP ++ +SW
Sbjct: 54 E---------------------RDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWN 92
Query: 124 ELIVAYANNGDMESA-------------------GG-------LFNELPLKDKVAWTAMV 157
L+ AY NG +E A GG LF+ +P +D ++W+AM+
Sbjct: 93 GLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMI 152
Query: 158 TGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGF 216
GY QN EA+ +F MQ + + +S C+ + ++ + C + +
Sbjct: 153 AGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKA--- 209
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G VG+AL+ MY KCGSID+A F + +++V S+++MI G+A HG A+ +F
Sbjct: 210 GYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVF 269
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGR 324
M T +P+ T + VL ACSH GL + YG++ HY CMVDLLGR
Sbjct: 270 ELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGR 329
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIIL 384
AG LEEA +++ MP EP+ WGALLGA +IH N E+ + AA +FE+EP G YI+L
Sbjct: 330 AGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILL 389
Query: 385 SNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQA 444
S +YA++G W D ++R ++ G+KK PGYSWLE + IH F+ GD +HP++ +I
Sbjct: 390 SKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEV-QNKIHTFKVGDTSHPHTDKIYTF 448
Query: 445 LGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKN 504
L ++ +L+ +GY + V +DV +EEK +L HSEKLA+A+G+L G +R++KN
Sbjct: 449 LEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKN 508
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
LR+CEDCH + S+++GR I++RDN RFH+F+ G CSC ++W
Sbjct: 509 LRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
MI Y++ +R +FD+MPERD+ SW ++ Y N D+++A LF +P +D V+W
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
AM++GY QN EA E F +M + ++ G+++A Q G I+ A + E
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPL----KNGISWNGLLAAYVQNGRIEDAKRLFESKMD 116
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
N ++ G + +F M QR+ S+S+MI G++ +G + A+
Sbjct: 117 WTLVSWNCLM-----------GGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEAL 165
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F +M + + N +F L+ CS++
Sbjct: 166 HFFVEMQRDCERLNRSSFTCALSTCSNIA 194
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 304/543 (55%), Gaps = 51/543 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ GYI+ G ++ LY M+ G TL+ KA ++ + G+QI A +
Sbjct: 1077 WNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQA-VV 1135
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ GF DL+V + ++ MY+KCG +MESA
Sbjct: 1136 VKRGFNLDLFVISGVLDMYLKCG-------------------------------EMESAR 1164
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+FNE+P D VAWT M++G V+N + A+ + M+ + V+ D T ++ AC+ L
Sbjct: 1165 RIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLT 1224
Query: 200 VIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
++ + + F P V ++L+DMY+KCG+I+DA +F + S++
Sbjct: 1225 ALEQGRQIHANTVKLNCAFDPF----VMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWN 1280
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
+MI+G A HG A A+Q F +M P+ VTFIGVL+ACSH GL K
Sbjct: 1281 AMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKI 1340
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
YG+ P +HY+C+VD L RAG + EA K++ MP E + ++ LL AC++ + E +
Sbjct: 1341 YGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKR 1400
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
A L LEP Y++LSN+YA+A W++V+ R +++ +KK+PG+SW++ + +
Sbjct: 1401 VAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDL-KNKV 1459
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H F AGD +H + I + ++ R++ +GY P+ L DV +E+K+ L HSEKLA
Sbjct: 1460 HLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLA 1519
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+A+GL+ T P T+R++KNLR+C DCH + S+V RE+V+RD RFHHF+ G CSCG
Sbjct: 1520 IAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCG 1579
Query: 546 NYW 548
+YW
Sbjct: 1580 DYW 1582
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 190/439 (43%), Gaps = 81/439 (18%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A++ + + +D L+ +RR + TL+ +FK C S + +H +
Sbjct: 697 WNAILSAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV 754
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+G D++V ++ +Y K G + +R +FD M RDVV W ++ AY + G A
Sbjct: 755 KIG-LQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEAL 813
Query: 140 GLFNEL-------------------------------PLK----------------DKVA 152
LF+E LK D +A
Sbjct: 814 LLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIA 873
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W ++ ++Q + EA++ F M + V D +T V ++S A L ++ + I
Sbjct: 874 WNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVV 933
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
SG + V VG+ LI+MY K GS+ A +F M + ++ S+++MI G A+ G +
Sbjct: 934 RSGLDQV--VSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991
Query: 273 IQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC--------------- 317
+ +F D+++ P+ T VL ACS +G C+ +T +AC
Sbjct: 992 VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH---LATQIHACAMKAGVVLDSFVSTT 1048
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNG---GVWGALLGACQIHRN-PEIAQIAANHLFEL 373
++D+ ++G +EEA E + V +G W A++ + + P+ ++ ++
Sbjct: 1049 LIDVYSKSGKMEEA----EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRL---YILMQ 1101
Query: 374 EPDKIGNYIILSNIYASAG 392
E + N I L+N +AG
Sbjct: 1102 ESGERANQITLANAAKAAG 1120
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ + WT +I G + G + ++ Y MR + P +T + L KAC+ +
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA T+ L D +V +++ MY KCG + +R +F + SW +
Sbjct: 1224 TALEQGRQIHANTVKL-NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAM 1282
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV A +G+ E EA+++FE M+ GV D
Sbjct: 1283 IVGLAQHGNAE-------------------------------EALQFFEEMKSRGVTPDR 1311
Query: 186 VTLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
VT +GV+SAC+ G++ Y N+ + + G P + S L+D S+ G I +A +
Sbjct: 1312 VTFIGVLSACSHSGLVSEAYENFYS-MQKIYGIEP--EIEHYSCLVDALSRAGRIREAEK 1368
Query: 244 IFVGM 248
+ M
Sbjct: 1369 VISSM 1373
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 160/373 (42%), Gaps = 47/373 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R VF Q+ + W +I G L G + S+ ++ + R G+ P FT++++ +AC
Sbjct: 958 SRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRAC 1017
Query: 63 TEVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ + L QIHA + G D +V T+I +Y K
Sbjct: 1018 SSLGGGCHLATQIHA-CAMKAGVVLDSFVSTTLIDVYSK--------------------- 1055
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+G ME A LF D +W AM+ GY+ + +A+ + MQ +G
Sbjct: 1056 ----------SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGE 1105
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ +TL A L +K + + GF ++ V S ++DMY KCG ++ A
Sbjct: 1106 RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNL--DLFVISGVLDMYLKCGEMESA 1163
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
RIF + + ++++MI G +G+ A+ + M ++ +P+ TF ++ ACS +
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 302 GLKCYG--VSPSTDHYAC---------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
G + +T C +VD+ + G +E+A + ++ W A+
Sbjct: 1224 TALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIAS-WNAM 1282
Query: 351 LGACQIHRNPEIA 363
+ H N E A
Sbjct: 1283 IVGLAQHGNAEEA 1295
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 111/275 (40%), Gaps = 57/275 (20%)
Query: 21 TALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTIL 80
T+ +I HL SI + S+ R I D+ LG++ HA+ IL
Sbjct: 610 TSTANPFIPPAHLIHSIPQWFSILRHAIAAS---------------DLPLGKRAHAR-IL 653
Query: 81 LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGG 140
G D ++ N +I MY KCG L SA
Sbjct: 654 TSGHHPDRFLTNNLITMYSKCGSLS-------------------------------SARK 682
Query: 141 LFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ P +D V W A+++ + K R+ F ++ + V TL V C
Sbjct: 683 LFDTTPDTSRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMC--- 737
Query: 199 GVIKYANWVCEIAEGSG--FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
++ + E G G +V V AL+++Y+K G I +A +F GM R+V +
Sbjct: 738 -LLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
+ M+ + G + A+ LF + +T +P+ VT
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL 831
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 314/554 (56%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++++ K+ WT +I Y ++I + + ++EGI + ++ +AC+ +
Sbjct: 422 VFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKS 481
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+SL +Q+H+ I G DL + N +I +Y +CG V
Sbjct: 482 ISLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGE-----------------------V 516
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA N +F L KD V WT+MV + +N EA+ F +M AG++ D V
Sbjct: 517 CYALN--------IFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVA 568
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LVG++ A A L + + F P+ VV S+L+DMYS CGS++ A ++F
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFLIRGKF-PVEGAVV-SSLVDMYSGCGSMNYALKVFDE 626
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
K ++V +++MI MHG AI +F M++T P+ V+F+ +L ACSH L
Sbjct: 627 AKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEG 686
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
Y + P +HYAC+VDLLGR+G EEA K ++ MP+EP VW ALLGAC+
Sbjct: 687 KFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACR 746
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N E+A IA + L ELEPD GNY+++SN++A G W++V +R + GL+K+P
Sbjct: 747 IHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPAC 806
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG-YQPNLRSVLYDVSDEEKK 474
SW+E +H F A D +H +S I L ++ ++L+ +G Y + VL+DVS+EEK
Sbjct: 807 SWIEIG-NTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKI 865
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSE+LA++FGL++T+ G +RI KNLR+C DCH F S++ REIVVRD RF
Sbjct: 866 DLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRF 925
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSCG++W
Sbjct: 926 HHFSGGTCSCGDFW 939
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 44/302 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACT 63
+F+ + + F W ALI + G +++ +Y +MR G P TL+++ KAC
Sbjct: 115 LFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACG 174
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSW 122
D G ++H + G S L V N ++GMY KCG L + +VF+ M + RDV S
Sbjct: 175 AEGDGRCGSEVHGLAVKSGLDRSTL-VANALVGMYAKCGLLDSALRVFEWMRDGRDVAS- 232
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
W + ++G VQN EA++ F RMQ G
Sbjct: 233 ------------------------------WNSAISGCVQNGMFLEALDLFRRMQSDGFS 262
Query: 183 TDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ T VGV+ CA+L + + + + G+ F N AL+ MY++CG +D
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN-----ALLVMYARCGWVDS 317
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F + ++ S++SM+ + + AI FG+MV+ P+ + +L+A H
Sbjct: 318 ALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGH 377
Query: 301 VG 302
+G
Sbjct: 378 LG 379
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 39/323 (12%)
Query: 1 MDSFPRLVFEQVKY-KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALF 59
+DS R VFE ++ ++ W + I G + G +++ L+ M+ +G S+T +
Sbjct: 214 LDSALR-VFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVL 272
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
+ C E+ ++ G+++HA + G T N ++ MY +CG++
Sbjct: 273 QVCAELAQLNHGRELHAALLKCG--TEFNIQCNALLVMYARCGWV--------------- 315
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+SA +F E+ KD ++W +M++ YVQN EAI++F M
Sbjct: 316 ----------------DSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G D+ +V ++SA LG + V A +++ + + L+DMY KC S++
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLD--SDLQIANTLMDMYIKCYSVE 417
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+ R+F M+ ++ S++++I +A R AI F K K + + +L ACS
Sbjct: 418 CSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477
Query: 300 HVGLKCYGVSPSTDHYACMVDLL 322
GLK + YA LL
Sbjct: 478 --GLKSISLLKQVHSYAIRNGLL 498
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
VS G+Q+HA + G D GFL T+L+
Sbjct: 71 VSEGRQLHAHAVATGALGDD------------DAGFLA-----------------TKLLF 101
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ----YAGVET 183
Y G + A LF+ +P + +W A++ + + EA+ + M+ AG
Sbjct: 102 MYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAP 161
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TL V+ AC G + + V +A SG + +V +AL+ MY+KCG +D A R
Sbjct: 162 DGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLD--RSTLVANALVGMYAKCGLLDSALR 219
Query: 244 IFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M+ R+V S++S I G +G A+ LF M N T +GVL C+ +
Sbjct: 220 VFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELA 279
Query: 303 LKCYG 307
+G
Sbjct: 280 QLNHG 284
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + L+ MY KCG + DA+R+F GM R VFS++++I G A A+ ++ M +E
Sbjct: 95 LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154
Query: 284 ----TKPNGVTFIGVLTACSHVGL-KC----------YGVSPSTDHYACMVDLLGRAGCL 328
P+G T VL AC G +C G+ ST +V + + G L
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLL 214
Query: 329 EEALKMVEKMPVEPNGGVWGALLGAC 354
+ AL++ E M + W + + C
Sbjct: 215 DSALRVFEWMRDGRDVASWNSAISGC 240
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 313/554 (56%), Gaps = 50/554 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N +W A I +L G +I + RR G P T A AC +
Sbjct: 115 LFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARC 174
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+Q+H ++ GF D+ V N +I +Y KC
Sbjct: 175 LDLGRQLHG-LVIRSGFEGDVSVANGIIDVYGKCK------------------------- 208
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYV 186
++E A +FN + ++ V+W MV QN + +A F + G+E TDY+
Sbjct: 209 ------EVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYM 262
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ VISA A + +++ V +A + ++ VGSAL+DMY KCGSI+D ++F
Sbjct: 263 -VSSVISAYAGISGLEFGRSVHALAVKACVE--GDIFVGSALVDMYGKCGSIEDCEQVFH 319
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M +RN+ S+++MI G+A G A+ LF +M ++E N VT I VL+ACS G
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVANYVTLICVLSACSRGGAVKL 378
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
Y + P +HYAC+ D+LGRAG +E A + V+KMP+ P VWGALL AC
Sbjct: 379 GNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNAC 438
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+++ PE+ +IAA++LF+L+P GN+++LSN++A+AG WD+ + VR+ +K G+KK G
Sbjct: 439 RVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAG 498
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+ + +H F+A D +H ++EIQ L L +QA GY P+ LYD+ +EEK
Sbjct: 499 CSWVTA-KNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKM 557
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ HSEK+ALAFGL+ PG +RI KNLRIC DCH S ++GREI+VRDN RF
Sbjct: 558 TEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRF 617
Query: 535 HHFQDGKCSCGNYW 548
H F+D +CSC ++W
Sbjct: 618 HRFRDSQCSCRDFW 631
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 51/377 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WTALI G + G+ ++ + MRRE I P FT FKA T + G+QIHA +
Sbjct: 26 WTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIAL 85
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
LG +D +VG + MY K G ++++FDEMP R+V
Sbjct: 86 KLGQI-NDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNV-------------------- 124
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
W A ++ V + +P +AI+ F + G E D +T ++ACA
Sbjct: 125 -----------AVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADAR 173
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ + + SGF +V V + +ID+Y KC ++ A +F GM +RN S+ +M
Sbjct: 174 CLDLGRQLHGLVIRSGFE--GDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTM 231
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-PSTDHYAC- 317
+ + A +F K + V++A + + +G S + AC
Sbjct: 232 VAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACV 291
Query: 318 ---------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAAN 368
+VD+ G+ G +E+ ++ +MP E N W A++ + ++A
Sbjct: 292 EGDIFVGSALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAHQGDVDMAMT--- 347
Query: 369 HLF-ELEPDKIGNYIIL 384
LF E++ + + NY+ L
Sbjct: 348 -LFEEMQSEAVANYVTL 363
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF + +N W ++ + + ++ R+EGI + +S++ A +
Sbjct: 215 MVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGIS 274
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+ +HA + D++VG+ ++ MY KCG + +VF EMPER++VSW +I
Sbjct: 275 GLEFGRSVHALAV-KACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMI 333
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA+ GD++ A L FE MQ V +YV
Sbjct: 334 SGYAHQGDVDMAMTL-------------------------------FEEMQSEAV-ANYV 361
Query: 187 TLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL+ V+SAC++ G +K N + E + + P + + DM + G ++ AY
Sbjct: 362 TLICVLSACSRGGAVKLGNEIFESMRDRYRIEP--GAEHYACIADMLGRAGMVERAYEFV 419
Query: 246 VGMKQRNVFS-YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
M R S + +++ ++G ++ K + K +G
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSG 463
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 134 DMESAGGLFNEL-PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
D+ + L +L P + V WTA+++G VQN A+ YF +M+ ++ + T
Sbjct: 6 DLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAF 65
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
A L + + IA G IN+ VG + DMYSK G +A R+F M RN
Sbjct: 66 KASTALCLPFAGKQIHAIA--LKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRN 123
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVGLKCYG 307
V +++ I + GR AI F + + +P+ +TF L AC+ +G + +G
Sbjct: 124 VAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHG 183
Query: 308 VSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
+ + ++D+ G+ +E A +MV N W ++ AC+ + E
Sbjct: 184 LVIRSGFEGDVSVANGIIDVYGKCKEVELA-EMVFNGMGRRNSVSWCTMVAACEQNDEKE 242
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
A + + E ++ +Y++ S I A AG+
Sbjct: 243 KACVVF-LMGRKEGIELTDYMVSSVISAYAGI 273
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 311/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + K+ WT +I G G K+++ + M EG FT ++ AC L
Sbjct: 226 LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLA 285
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA I+ + +++VG+ ++ MY KC + + VF +M ++V+S
Sbjct: 286 LDEGKQIHAY-IIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVIS------ 338
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WTAM+ GY QN EA+ F MQ + D T
Sbjct: 339 -------------------------WTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFT 373
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L VIS+CA L ++ A SG I V V +ALI +Y KCGS++ A+++F
Sbjct: 374 LGSVISSCANLASLEEGAQFHGQALASGL--ICFVTVSNALITLYGKCGSLEHAHQLFHE 431
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
MK R+ S+++++ G+A G+A+ I LF M+ P+GVTF+GVL+ACS GL
Sbjct: 432 MKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG 491
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K + ++P DHY CM+DLL RAG LEEA + +MP P+ W LL +C+
Sbjct: 492 YHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCR 551
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
++ N EI + AA L +LEP +YI+LS+IYA+ G WDDV+++R+ ++ G+KK PG+
Sbjct: 552 LNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGH 611
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ + +H F A D + P S +I L L ++ +GY P++ VL+DV EK +
Sbjct: 612 SWIKY-KNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIK 670
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+AFGLL G +R++KNLR+C DCH S++ REI+VRD +RFH
Sbjct: 671 MLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFH 730
Query: 536 HFQDGKCSCGNYW 548
F+DG CSCG++W
Sbjct: 731 LFKDGVCSCGDFW 743
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 188/361 (52%), Gaps = 26/361 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEVL 66
VF+ + + W +L+ GY G + +S+ +Y M ++G + T S + +
Sbjct: 93 VFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRG 152
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V LG+QIH Q I G+ S L+VG+ ++ MY K GF+ + ++F+E+PE+++V + +I
Sbjct: 153 FVDLGRQIHGQ-IFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMI 211
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ A LF+ +P KD ++WT ++TG QN +EA++ F+ M G D
Sbjct: 212 TGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQF 271
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V++AC + + + + +N+ VGSAL+DMY KC ++ A +F
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQ--DNIFVGSALLDMYCKCRNVKYAEAVFR 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV----- 301
M+ +NV S+++M++G+ +G + A+++F DM + E P+ T V+++C+++
Sbjct: 330 KMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEE 389
Query: 302 -----------GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
GL C+ V+ S ++ L G+ G LE A ++ +M + W AL
Sbjct: 390 GAQFHGQALASGLICF-VTVSN----ALITLYGKCGSLEHAHQLFHEMKIRDEVS-WTAL 443
Query: 351 L 351
+
Sbjct: 444 V 444
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ VF ++++KN WTA++ GY G+ ++++ ++C M+R I P FTL ++ +C
Sbjct: 323 YAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCA 382
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G Q H Q L G + V N +I +Y KCG L + ++F EM RD VSWT
Sbjct: 383 NLASLEEGAQFHGQA-LASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWT 441
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L V+GY Q K E I FE M G+
Sbjct: 442 AL-------------------------------VSGYAQFGKANETISLFETMLAHGIVP 470
Query: 184 DYVTLVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D VT VGV+SAC++ G+++ Y + C + E PI + + +ID+ S+ G +++A
Sbjct: 471 DGVTFVGVLSACSRAGLVEKGYHYFECMVKEHR-ITPIPDHY--TCMIDLLSRAGRLEEA 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+A K C E + + +++H + I+ + ++ N +I Y K G L +R VFD +P
Sbjct: 9 TAALKFCCEARNRAQVKKLHCR-IIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
+ ++ SW L+ AY+ G ++ +F+ +P D V+W ++++GY N E++ +
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 176 MQYAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M G V + +T ++ + G + + + FG + + VGS L+DMY+K
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIH--GQIFKFGYQSYLFVGSPLVDMYAK 185
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G I+DA RIF + ++N+ Y++MI G A QLF +M + ++ +++ +
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS----ISWTTI 241
Query: 295 LTACSHVGL 303
+T + GL
Sbjct: 242 ITGLTQNGL 250
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 315/558 (56%), Gaps = 54/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ W +I GY QG ++ L+ M P T L ACT +
Sbjct: 218 RKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTE 124
D+ G+ IH + + G+ SDL +GN ++ MY KC L +R+VF+ M RDV++W
Sbjct: 278 EDLEQGRAIH-RKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNI 336
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIVAY VQ + ++A++ F++MQ V +
Sbjct: 337 LIVAY-------------------------------VQYGQAKDALDIFKQMQLENVAPN 365
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+TL V+SACA LG + V IA G +VV+ ++L++MY++CGS+DD
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKA---DVVLENSLMNMYNRCGSLDDTVG 422
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F ++ +++ S+S++I +A HG + ++ F ++++ + VT + L+ACSH G+
Sbjct: 423 VFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGM 482
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G++P H+ CMVDLL RAG LE A ++ MP P+ W +LL
Sbjct: 483 LKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542
Query: 352 GACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
C++H + + A A+ LFELE D+ +LSN+YA AG WDDV + R +
Sbjct: 543 SGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAAR 599
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
KNPG S++E + +HEF AGD +HP I + L +++ GY P++R VL++V +
Sbjct: 600 KNPGCSYIEIN-DTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKE 658
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+++L HSEKLA+A+GL++T PG + I+KNLR C DCH S+++GR+IVVRD
Sbjct: 659 EEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRD 718
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF++G CSC +YW
Sbjct: 719 STRFHHFENGSCSCKDYW 736
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 148/294 (50%), Gaps = 30/294 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ N WT ++ + GH ++++ Y M EG+ P C+ D
Sbjct: 14 VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKD 73
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQ +HA + D+ +G +I MY +C L +RK FDEM ++ +V+W LI
Sbjct: 74 LKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIA 133
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ NGD A ++ + MV+ + KP D +T
Sbjct: 134 GYSRNGDHRGALKIYQD-----------MVSKSPEGMKP-----------------DAIT 165
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ AC +G I + SG+ ++ +V +ALI+MYSKCGS++ A ++F
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYA--SDSIVQNALINMYSKCGSLESARKVFDR 223
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+K R+V ++++MI G+A G A A++LF M + KPN VTFIG+LTAC+++
Sbjct: 224 LKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y G + A +F+ + + V+WT +V + +N REA+ Y+ RM G+ D
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V I C+ +K + + + ++++G+ALI MY++C ++ A + F M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEF-DIILGTALITMYARCRDLELARKTFDEM 120
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---TKPNGVTFIGVLTACSHVGLKC 305
++ + +++++I G++ +G A++++ DMV KP+ +TF L AC+ VG
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 306 YGVSPSTDHYA-----------CMVDLLGRAGCLEEALKMVEKM 338
G A ++++ + G LE A K+ +++
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY KCGS+ DA +F ++ N S++ ++ FA +G A+ + MV +P+G
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 291 FIGVLTACS 299
F+ + CS
Sbjct: 61 FVVAIGVCS 69
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 310/553 (56%), Gaps = 44/553 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++ ++ W ++ G + GH +++ M R G+ ++T S +F +
Sbjct: 214 LFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSS 273
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG+Q+H + +++ D +VG +++ MY KCG + + +FD W++
Sbjct: 274 RDLGRQLHGR-VVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR--------WSD--- 321
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F E + AW+ MV GYVQN + EA+E+F RM GV
Sbjct: 322 --------------FTE---DRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI 364
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V SACA G+++ V E G + + SA++DMYSK GS++DA RIF
Sbjct: 365 LTSVASACANAGMVEQGRQVHGFVEK--LGHRFDAPLASAIVDMYSKSGSLEDACRIFRS 422
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ +NV +++M+ +A HG+ A+++F M + PN +T + VL+ACSH GL
Sbjct: 423 AQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDG 482
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ YG+ P+T+HY CMVDL GRAG L++A +E+ + VW LL AC+
Sbjct: 483 YHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACR 542
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++ E AQ+A+ L +LE G+Y+++SN+YA+ W D ++R +K ++K PG
Sbjct: 543 LHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQ 602
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+ + V+H F A D +HP S EI L L++RL+ GY V++D+ +E+++
Sbjct: 603 SWIHL-KNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRET 661
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFG+++T G +RI KNLR+CEDCH + ++ REIVVRD RFH
Sbjct: 662 SLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFH 721
Query: 536 HFQDGKCSCGNYW 548
HF+DG+CSC ++W
Sbjct: 722 HFKDGQCSCEDFW 734
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE--GIGPVSFTLSALFKACTEV 65
VF+ ++ WT++I G +G D + + M E P +F L+ + + C +
Sbjct: 80 VFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGL 139
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G++IH IL G D+ + N ++ MY KCG G +R+ F M ++D SW +
Sbjct: 140 GDVESGRRIHGW-ILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIV 198
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +GD+ A LF+E L+D +W +V+G +++ EA+ ++M AGV
Sbjct: 199 IRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSN 258
Query: 186 VT------LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
T L G++S+ LG + V + E F VG +L+DMY KCG ++
Sbjct: 259 YTYSMVFALAGLLSS-RDLGRQLHGRVVVAVLEEDAF-------VGCSLMDMYCKCGEME 310
Query: 240 DAYRIF---VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
A IF + F++S+M+ G+ +GR A++ F M++ V +
Sbjct: 311 SALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVAS 370
Query: 297 ACSHVGL-----KCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
AC++ G+ + +G H + +VD+ ++G LE+A ++ + N
Sbjct: 371 ACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTK-NVA 429
Query: 346 VWGALLGACQIHRNPEIA 363
+W +L + H +A
Sbjct: 430 LWTTMLCSYASHGQGRMA 447
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 31/172 (18%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+ +VFD P R + +WT +I A G A G+ + D+ TA
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREG--RHADGMRAFAEMLDECGATA----------- 123
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
+ L GV+ CA LG ++ + SG P +VV+ +
Sbjct: 124 ----------------PNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCP--DVVLCN 165
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
A++DMY+KCG A R F M Q++ S++ +I G A QLF +
Sbjct: 166 AVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDE 217
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNGVTFIGVL 295
+ +A+R+F G R++ +++S+I G A GR ++ F +M+ T PN GVL
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 296 TACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
C+ +G + GV P ++D+ + G A + M + +
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAM-AQKDA 192
Query: 345 GVWGALLGAC 354
W ++ AC
Sbjct: 193 TSWNIVIRAC 202
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 312/548 (56%), Gaps = 28/548 (5%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK-- 60
S+P L+F + F L+R +L L + L+ + R +F L++L
Sbjct: 80 SYPLLLFRCSNCTSAFASNHLLR--VLPHPL--PLRLFPRLPRRNPHSFTFLLASLSNHL 135
Query: 61 -----ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
A + +G +HA + G DLYV N I Y CG + RKVFDE+P
Sbjct: 136 DTEPAAAGSIASRFMGTHVHALAVKAGA-AGDLYVRNAQIHFYGVCGDVAAMRKVFDELP 194
Query: 116 -ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
RDVV+W ++ Y G + A +F+ +P++D+V+W+ ++ GYV+ +P A+ F+
Sbjct: 195 IVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFK 254
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M GV+ + +V +SA AQLG+++ +V E+ + G +V +G+ALIDMYSK
Sbjct: 255 NMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGM--TMSVNLGAALIDMYSK 312
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGS+ A +F M +R+VF+++SMI G A HG H A+QLF V P +TF+GV
Sbjct: 313 CGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGV 372
Query: 295 LTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP 342
L ACS GL + Y + +HY CMVDLL RAG ++EA++++E M + P
Sbjct: 373 LNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP 432
Query: 343 NGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRR 402
+ +WG +L AC+ H ++ N L EL+P G Y++L++IYA A WD+V +VR+
Sbjct: 433 DPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRK 492
Query: 403 LLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
L+ G K+ G+S +E G++H+F GD+ H +S I L + RL GY P++
Sbjct: 493 LMSNRGTSKSAGWSLMEA-HGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVS 551
Query: 463 SVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
SVL+D+ DEEK + HSE+LA+A+G + G+ +RI+KNL +C DCH F ++V
Sbjct: 552 SVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVF 611
Query: 523 GREIVVRD 530
GREIVVRD
Sbjct: 612 GREIVVRD 619
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/611 (35%), Positives = 325/611 (53%), Gaps = 72/611 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTL---------- 55
R VF+ + +N WTAL++GY+ G + + SL+ M + VS+T+
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN--KVSWTVMLIGFLQDGR 156
Query: 56 ----SALFKACTEVLDVSLGQQIH----------AQTILLGGFTSDLYVGNTMIGMYVKC 101
L++ + +++ IH A+ I + TM+ Y +
Sbjct: 157 IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 102 GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
+ +RK+FD MPE+ VSWT +++ Y NG +E A LF +P+K +A AM++G
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLG 276
Query: 162 QN---AKPR----------------------------EAIEYFERMQYAGVETDYVTLVG 190
Q AK R EA++ F MQ GV + TL+
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++S CA L + + V F +V V S L+ MY KCG + + IF
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGL------ 303
+++ ++S+I G+A HG A+++F +M + TKPN VTF+ L+ACS+ G+
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+GV P T HYACMVD+LGRAG EA++M++ M VEP+ VWG+LLGAC+ H
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
++A+ A L E+EP+ G YI+LSN+YAS G W DV+ +R+L+K ++K+PG SW
Sbjct: 515 SQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
E + V R G +HP I + L +L L+ GY P+ L+DV +EEK L
Sbjct: 575 TEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSL 634
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSE+LA+A+ LL S G +R+MKNLR+C DCH + S+V REI++RD RFHHF
Sbjct: 635 KYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHF 694
Query: 538 QDGKCSCGNYW 548
++G+CSC +YW
Sbjct: 695 RNGECSCKDYW 705
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N ++ Y+K G + +RKVFD MPER+VVSWT L+ Y +NG ++ A LF ++P K+KV
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC-EI 210
+WT M+ G++Q+ + +A + +E + + D + +I + G + A + E+
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
+E S V+ + ++ Y + +DDA +IF M ++ S++SM++G+ +GR
Sbjct: 199 SERS-------VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 271 AAIQLFGDM 279
A +LF M
Sbjct: 252 DAEELFEVM 260
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 14/263 (5%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N+M+ Y +RK+FDEMP+R+++SW L+ Y NG+++ A +F+ +P ++ V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WTA+V GYV N K A F +M + V L+G + Q G I A C++
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL----QDGRIDDA---CKLY 164
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E P + + +++I K G +D+A IF M +R+V ++++M+ G+ + R
Sbjct: 165 E---MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 272 AIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC--MVDLLGRAGCL 328
A ++F M KTE + V + + V P AC M+ LG+ G +
Sbjct: 222 ARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEI 281
Query: 329 EEALKMVEKMPVEPNGGVWGALL 351
+A ++ + M E N W ++
Sbjct: 282 AKARRVFDSMK-ERNDASWQTVI 303
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
N I + G + +RK+FD + + SW ++ Y N A LF+E+P ++
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
++W +V+GY++N + EA + F+ M E + V+ ++ G + +
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKV-------D 127
Query: 210 IAEGSGFG-PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
+AE + P N V + ++ + + G IDDA +++ + ++ + +SMI G GR
Sbjct: 128 VAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYACMVDLLG 323
A ++F +M ++ + +T+ ++T K + V P + L+G
Sbjct: 188 VDEAREIFDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 324 --RAGCLEEALKMVEKMPVEP 342
+ G +E+A ++ E MPV+P
Sbjct: 244 YVQNGRIEDAEELFEVMPVKP 264
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 308/544 (56%), Gaps = 52/544 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R FE++ K+ W+ +I Y K+++ ++ MR+ + P FT +++ +AC +
Sbjct: 295 RXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATM 354
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++LG QIH I +G SD++V N ++ +Y KCG
Sbjct: 355 EGLNLGNQIHCHVIKIG-LHSDVFVSNALMDVYAKCG----------------------- 390
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVA-WTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
ME++ LF E P ++ V W ++ G+VQ +A+ F M V+
Sbjct: 391 --------RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT 442
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + ACA L ++ + + + F ++VV +ALIDMY+KCGSI DA +
Sbjct: 443 EVTYSSALRACASLAALEPGLQIHSLTVKTTFD--KDIVVTNALIDMYAKCGSIKDARLV 500
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M +++ S+++MI G++MHG A A L G + + ++
Sbjct: 501 FDLMNKQDEVSWNAMISGYSMHGLACANAGLLD---------QGQAYFTSM-------IQ 544
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
+G+ P +HY CMV LLGR G L++A+K+++++P +P+ VW ALLGAC IH + E+ +
Sbjct: 545 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGR 604
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
I+A H+ E+EP +++LSN+YA+A WD+V+ VR+ +K G+KK PG SW+E +G
Sbjct: 605 ISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIES-QGT 663
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
+H F GD +HP I L L + + GY PN VL DV DEEK+R+L HSE+L
Sbjct: 664 VHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERL 723
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
AL+FG++ T G+ +RIMKNLRIC DCH + S+V+ REIVVRD RFHHFQ+G CSC
Sbjct: 724 ALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSC 783
Query: 545 GNYW 548
G+YW
Sbjct: 784 GDYW 787
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 179/365 (49%), Gaps = 49/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + YK+ WT ++ + K+++ L+ MR G P +FT +++FKAC +
Sbjct: 194 REVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G+ +H L + DLYVG ++ +Y K G + +R F+E+P++DV+ W+ +
Sbjct: 254 EAFDVGKSVHG-CALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFM 312
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA Q+ + +EA+E F +M+ A V +
Sbjct: 313 IARYA-------------------------------QSDQSKEAVEMFFQMRQALVLPNQ 341
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V+ ACA + + N + C + + G ++V V +AL+D+Y+KCG ++++ +
Sbjct: 342 FTFASVLQACATMEGLNLGNQIHCHVIK---IGLHSDVFVSNALMDVYAKCGRMENSMXL 398
Query: 245 FVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-- 301
F RN V ++++I+G G A++LF +M++ + VT+ L AC+ +
Sbjct: 399 FAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 458
Query: 302 ---GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
GL+ + ++ T ++D+ + G +++A ++V + + + W A++
Sbjct: 459 LEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMIS 517
Query: 353 ACQIH 357
+H
Sbjct: 518 GYSMH 522
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 153/355 (43%), Gaps = 45/355 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N + LI+GY ++I L+ + REG F + + K +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDC 154
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG IHA I G S+ +VG +I Y CG + +R+VFD + +D+VSWT ++
Sbjct: 155 GELGWGIHA-CIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+A N +EA++ F +M+ G + + T
Sbjct: 214 CFAENDCF-------------------------------KEALKLFSQMRMVGFKPNNFT 242
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V AC L V A S + ++ VG AL+D+Y+K G IDDA F
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYEL--DLYVGVALLDLYTKSGDIDDARXAFEE 300
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ +++V +S MI +A ++ A+++F M + PN TF VL AC+
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + G+ ++D+ + G +E ++ + + P + W ++
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVI 415
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 155/349 (44%), Gaps = 74/349 (21%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG---PVSFTLSALFKA---CTEVLDV 68
+N FL RG+ +Q + +E +G P F A A C + +
Sbjct: 4 RNNFLIRFSRRGFSVQS---------AKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEP 54
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S G+ +H + + GG DL+ N ++ MYVK FL
Sbjct: 55 SRGKGLHCEILKRGG-CLDLFAWNILLNMYVKSDFLC----------------------- 90
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD---Y 185
A LF+E+P ++ +++ ++ GY ++ + EAIE F R+ G E + +
Sbjct: 91 --------DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVF 142
Query: 186 VTLVGVISA--CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T++ ++ + C +LG +A C G +N VG+ALID YS CG +D A
Sbjct: 143 TTILKLLVSMDCGELGWGIHA---CIFK----LGHESNAFVGTALIDAYSVCGRVDVARE 195
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F G+ +++ S++ M+ FA + A++LF M KPN TF V AC +GL
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKAC--LGL 253
Query: 304 KCYGVSPST-----------DHY--ACMVDLLGRAGCLEEALKMVEKMP 339
+ + V S D Y ++DL ++G +++A E++P
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP 302
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 319/584 (54%), Gaps = 54/584 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W ++ G G ++++ + SM ++G+ P + T+S+L K+ + G +IH
Sbjct: 256 NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIH 315
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
L D+Y G ++ MY KCG L C++KV D + R++ +W L+ YAN G
Sbjct: 316 C-FFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRF 374
Query: 136 ESAGGLFNELPLKDKV-----AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+ A L EL K+++ W ++TGY N + +A+ +++ AGV + V+
Sbjct: 375 DIALELV-ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTS 433
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPI------------------------------- 219
+IS G + + + C + G P
Sbjct: 434 LISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRA 493
Query: 220 --NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
++VV +ALIDMYSK GS+ A IF ++Q+N+ ++M+ G A+HG+ AI+LF
Sbjct: 494 YDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFH 553
Query: 278 DMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRA 325
DM + KP+ +TF +LTAC +GL YGV P+T++YACMVDLL R
Sbjct: 554 DMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARC 613
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
G L+EA+ +E+ P++P WGALL C IH N +A++AA +LF LEP NY+++
Sbjct: 614 GYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMM 673
Query: 386 NIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQAL 445
N+Y M+D+ ++ +K G+ PG+SW++ ++G IH F HP + EI + L
Sbjct: 674 NLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQG-IHVFEVDGKPHPETAEIYEEL 732
Query: 446 GDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG-ATVRIMKN 504
L+ +++ GY P+ + Y+V +EEK+++L+ H+EKLA+ +GL+ + A VR+MKN
Sbjct: 733 IRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKN 792
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
R+C DCH S + R+I++RD +RFHHF DGKCSC +YW
Sbjct: 793 TRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 166/372 (44%), Gaps = 23/372 (6%)
Query: 3 SFPRLVFEQVK--YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
S RL+ E + K+ LW + ++I+++ M+ G+ +T + +
Sbjct: 105 SCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLH 164
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + G+ +HA + L + V + GMY + + + +V D M VV
Sbjct: 165 ACGRAGALREGRAVHAYALKLA-LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVV 223
Query: 121 SWTELIVAYANNG----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
W ++ A G +E A + P + W +++G ++ + REA+ M
Sbjct: 224 PWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASM 283
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
G+ D T+ ++ + A G++++ + + P +V G+AL+DMY+KCG
Sbjct: 284 LKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEP--DVYTGTALVDMYAKCG 341
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+D A ++ ++ RN+ +++S++ G+A GR A++L M K P+ T+ G++T
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 297 ACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEP 342
S G +K GV+P+ + ++ G E++ +M V+P
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461
Query: 343 NGGVWGALLGAC 354
+ LL AC
Sbjct: 462 SLVTMSVLLRAC 473
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 138/365 (37%), Gaps = 71/365 (19%)
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
KD V W V + + EAI F MQ GV D T V+ AC + G ++ V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 208 --------------------------------CEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ + G G +VV +A++ ++
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAG---SVVPWNAVVACCARL 235
Query: 236 GSIDDAYRIFVGMKQR----NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
G +DDA + M + NV ++++++ G + HGR A+ + M+K +P+ T
Sbjct: 236 GLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTV 295
Query: 292 IGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+L + ++ GL +G + P +VD+ + G L+ A K+++ +
Sbjct: 296 SSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALE- 354
Query: 341 EPNGGVWGALLG----ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
N W +L+ A + E+ ++ + L+PD I + L Y+ G
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELMKKN--RLDPD-ITTWNGLITGYSMNGQSSQ 411
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
+ R +K G+ N SW G H D + +Q DG
Sbjct: 412 AVLLLRQIKAAGVTPNV-VSWTSLISGSCHNGEYEDSFY------------FCHEMQKDG 458
Query: 457 YQPNL 461
QP+L
Sbjct: 459 VQPSL 463
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 317/555 (57%), Gaps = 55/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F+++ +N WT ++ G ++++ +M R+G+ P ++T S++ AC
Sbjct: 137 LFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTP- 195
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +HA T+ +G SD++V +++I Y+K
Sbjct: 196 --GVLAALHASTVKVG-LDSDVFVRSSLIDAYMKL------------------------- 227
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
GD++ +F+E+ +D V W +++ G+ Q+ AIE F RM+ AG +
Sbjct: 228 ------GDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQG 281
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ AC + +++ V ++++ +AL+DMY KCGS++DA +F
Sbjct: 282 TLTSVLRACTGMVMLEAGRQV----HAHVLKYERDLILHNALLDMYCKCGSLEDAEALFH 337
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGL-- 303
M QR+V S+S+MI G A +G++ A+++F D++K+E PN +T +GVL ACSH GL
Sbjct: 338 RMPQRDVISWSTMISGLAQNGKSAEALRVF-DLMKSEGVAPNRITMVGVLFACSHAGLVE 396
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P +H+ CMVDLLGRAG L+EA++ + M +EP+ +W LLGA
Sbjct: 397 DGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H++ +A AA + +LEPD G ++LSN YA W D + + ++ G+KK P
Sbjct: 457 CRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEP 516
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E ++ V H F AGDL+HP S I Q L L+ R+ A GY P VL D++ E+K
Sbjct: 517 GRSWIELEKHV-HVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQK 575
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEK+A+AFG + G +RIMKNLRIC DCH F S+ GR I++RD +R
Sbjct: 576 EDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVR 635
Query: 534 FHHFQDGKCSCGNYW 548
FHHFQDG CSCG+YW
Sbjct: 636 FHHFQDGACSCGDYW 650
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ +W ++I G+ G +I L+ M+ G TL+++ +ACT +
Sbjct: 234 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGM 293
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+Q+HA + + DL + N ++ MY KCG L + +F MP+RDV+SW+ +
Sbjct: 294 VMLEAGRQVHAHVL---KYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTM 350
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +G QN K EA+ F+ M+ GV +
Sbjct: 351 I-------------------------------SGLAQNGKSAEALRVFDLMKSEGVAPNR 379
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+VGV+ AC+ G+++ W + FG + ++D+ + G +D+A
Sbjct: 380 ITMVGVLFACSHAGLVE-DGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFI 438
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M + + + +++ MH + A +++K E G +
Sbjct: 439 RDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVL 486
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 129/306 (42%), Gaps = 53/306 (17%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQ-------TILLGGFTSDLYVGNTMIGMYVKCG 102
PVS T L K C G+ IH + GG ++V N+++ MY K G
Sbjct: 72 PVSLT--RLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFG 129
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L + ++FD MPER+VV+WT ++ A AN
Sbjct: 130 LLDDALRLFDRMPERNVVTWTTVVAALAN------------------------------A 159
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
+ + EA+ + M GV + T V+ AC GV+ + A G ++V
Sbjct: 160 DGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLAALH-----ASTVKVGLDSDV 214
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
V S+LID Y K G +D R+F M R++ ++S+I GFA G AI+LF M
Sbjct: 215 FVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDA 274
Query: 283 ETKPNGVTFIGVLTACS-----HVGLKCYGVSPSTDH----YACMVDLLGRAGCLEEALK 333
N T VL AC+ G + + + + ++D+ + G LE+A
Sbjct: 275 GFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEA 334
Query: 334 MVEKMP 339
+ +MP
Sbjct: 335 LFHRMP 340
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF------GPINNVVVGSALIDMYSKC 235
D V+L ++ C + G + E G G + V ++L+ MY+K
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +DDA R+F M +RNV ++++++ A GR A++ M + PN TF V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 295 LTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
L AC G+ + ST D+ R+ ++ +K+
Sbjct: 189 LGACGTPGV-LAALHASTVKVGLDSDVFVRSSLIDAYMKL 227
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 310/555 (55%), Gaps = 48/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W +I G + G ++ L+ +M E SFT + + +A +
Sbjct: 30 RRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGL 89
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S+G+Q+HA T+ +G D++V +I MY KCG
Sbjct: 90 ELISIGRQLHACTLKMG-IGDDIFVSCALIDMYSKCG----------------------- 125
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+E A +F E+P K V W ++ GY + EA++ + M+ +GV+ D+
Sbjct: 126 --------SIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDH 177
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T ++ CA+L +++A GFG +++V +AL+D YSK G I+DA +F
Sbjct: 178 FTFSMIVRICARLASVEHAKQAHAALIRHGFG--SDIVANTALVDFYSKWGRIEDARHVF 235
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +NV S++++I G+ HGR A++LF M++ PN +TF+ VL+ACSH GL
Sbjct: 236 DKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSE 295
Query: 306 YG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + P HYACM++L+GR G L+EAL ++ P +P +W ALL A
Sbjct: 296 RGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTA 355
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+++ N E+ + AA L+ +EPDK+ NYI+L NIY SAG + + V LK GL+ P
Sbjct: 356 CRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRP 415
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E R H F +GD HP EI Q + L+ + GY PN +++L DV DE++
Sbjct: 416 VCSWIEVKRRP-HVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDV-DEQE 473
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+R+ + HSEKLA+AFGL++T A ++I++ RIC DCH + ++V GREIV+RD R
Sbjct: 474 ERVRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGR 533
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSC +YW
Sbjct: 534 FHHFKHGHCSCEDYW 548
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 51/318 (16%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
GF D Y+ N ++ M+VKCG + +R++FDEMPER++VSW +I + GD A LF
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+ +E AG T +I A A L +I
Sbjct: 65 ---------------------------LNMWEEFSDAGS----FTFAVMIRASAGLELIS 93
Query: 203 YANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
+ C + G G +++ V ALIDMYSKCGSI+DA +F M ++ ++++I
Sbjct: 94 IGRQLHACTLKMGIG----DDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTII 149
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----------SHVGLKCYGVS 309
G+A+HG + A+ ++ +M + K + TF ++ C +H L +G
Sbjct: 150 AGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFG 209
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RNPEIAQIAAN 368
+VD + G +E+A + +KM N W AL+G H R E ++
Sbjct: 210 SDIVANTALVDFYSKWGRIEDARHVFDKM-ASKNVISWNALIGGYGNHGRGSEAVELFEQ 268
Query: 369 HLFE-LEPDKIGNYIILS 385
+ E + P+ I +LS
Sbjct: 269 MIQERMNPNHITFLAVLS 286
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/548 (37%), Positives = 307/548 (56%), Gaps = 64/548 (11%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WTA+I GY+ G +++L+ MRREG+ P FT S + V +IHA+ +
Sbjct: 374 WTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFISEIHAE-V 428
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ + VG ++ +VK G + + KVF ELI
Sbjct: 429 IKTNYEKSSSVGTALLDAFVKIGNISDAVKVF------------ELI------------- 463
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
KD +AW+AM+ GY Q + EA + F ++ G++ + T +I+AC
Sbjct: 464 ------ETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAP- 516
Query: 200 VIKYANWVCEIAEGSGFGP------INNVV-VGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+ +G F +NN + V S+L+ +Y+K G+I+ A+ IF K+R+
Sbjct: 517 -------TASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERD 569
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG----- 307
+ S++SMI G+A HG+A A+++F +M K + + +TFIGV++AC+H GL G
Sbjct: 570 LVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFN 629
Query: 308 -------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
++P+ +HY+CM+DL RAG L +A+ ++ MP P VW +L A ++HRN
Sbjct: 630 IMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNI 689
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ ++AA + LEP Y++LSNIYA+AG W + VR+L+ +KK PGYSW+E
Sbjct: 690 ELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEV 749
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTH 480
+ + F AGDL+HP S I L +L RL+ GYQP+ V +D+ DE+K+ IL H
Sbjct: 750 -KNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHH 808
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SE+LA+AFGL+ T P ++I+KNLR+C DCH F+ S V R IVVRD+ RFHHF+ G
Sbjct: 809 SERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGG 868
Query: 541 KCSCGNYW 548
CSCG+YW
Sbjct: 869 LCSCGDYW 876
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 172/372 (46%), Gaps = 50/372 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W +L+ GY L+C M+ EG P +T+S + A
Sbjct: 157 RRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQ 216
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V++G QIHA + LG F ++ V N++I M K G L +R VFD M
Sbjct: 217 GAVAIGMQIHALVVKLG-FETERLVCNSLISMLSKSGMLRDARVVFDNMEN--------- 266
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
KD V+W +M+ G+V N + EA E F MQ AG + +
Sbjct: 267 ----------------------KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTH 304
Query: 186 VTLVGVISACA---QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T VI +CA +LG+++ + C+ + SG NV+ +AL+ +KC IDDA+
Sbjct: 305 ATFASVIKSCASLKELGLVRVLH--CKTLK-SGLSTNQNVL--TALMVALTKCKEIDDAF 359
Query: 243 RIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-- 299
+F M ++V S+++MI G+ +G A+ LF M + KPN T+ +LT
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV 419
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GA 353
H + S+ ++D + G + +A+K+ E + + + W A+L G
Sbjct: 420 FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK-DVIAWSAMLAGY 478
Query: 354 CQIHRNPEIAQI 365
Q E A+I
Sbjct: 479 AQAGETEEAAKI 490
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 37/301 (12%)
Query: 2 DSFPRL---VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL 58
DS PR +F+Q ++ L+ Y ++++ L+ S+ R G+ P S+T+S +
Sbjct: 49 DSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCV 108
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
C + ++G+Q+H Q + G L VGN+++ MY K G + R+VFDEM +RD
Sbjct: 109 LSVCAGSFNGTVGEQVHCQCVKCG-LVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VVSW L+ TGY N + E F MQ
Sbjct: 168 VVSWNSLL-------------------------------TGYSWNRFNDQVWELFCLMQV 196
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G DY T+ VI+A A G + + + GF +V ++LI M SK G +
Sbjct: 197 EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFE--TERLVCNSLISMLSKSGML 254
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA +F M+ ++ S++SMI G ++G+ A + F +M KP TF V+ +C
Sbjct: 255 RDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC 314
Query: 299 S 299
+
Sbjct: 315 A 315
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 174/366 (47%), Gaps = 54/366 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+ ++ K+ W ++I G+++ G ++ + +M+ G P T +++ K+C +
Sbjct: 258 RVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASL 317
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ L + +H +T+ G L ++ V T L
Sbjct: 318 KELGLVRVLHCKTLKSG---------------------LSTNQNVL-----------TAL 345
Query: 126 IVAYANNGDMESAGGLFNELP-LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+VA +++ A LF+ + ++ V+WTAM++GY+QN +A+ F M+ GV+ +
Sbjct: 346 MVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPN 405
Query: 185 YVTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ T +++ +++A ++ EI AE + VG+AL+D + K G+I DA +
Sbjct: 406 HFTYSTILT-------VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVK 458
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F ++ ++V ++S+M+ G+A G A ++F + + KPN TF ++ AC+
Sbjct: 459 VFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTA 518
Query: 303 -------LKCYGVSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
Y + ++ C +V L + G +E A ++ ++ E + W +++
Sbjct: 519 SVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMI 577
Query: 352 GACQIH 357
H
Sbjct: 578 SGYAQH 583
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 36/243 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
VFE ++ K+ W+A++ GY G +++ ++ + REGI P FT ++ ACT
Sbjct: 459 VFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTA 518
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+Q HA I L + L V ++++ +Y K G + + ++F ERD+VSW +I
Sbjct: 519 SVEQGKQFHAYAIKL-RLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMI 577
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA +G + ++A+E FE MQ +E D +
Sbjct: 578 SGYAQHG-------------------------------QAKKALEVFEEMQKRNLEVDAI 606
Query: 187 TLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +GVISACA G++ K N+ + P + S +ID+YS+ G + A I
Sbjct: 607 TFIGVISACAHAGLVGKGQNYFNIMINDHHINP--TMEHYSCMIDLYSRAGMLGKAMDII 664
Query: 246 VGM 248
GM
Sbjct: 665 NGM 667
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 16/233 (6%)
Query: 132 NGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGV 191
+ D A LF++ PL+D ++ Y + + +EA+ F + +G+ D T+ V
Sbjct: 49 DSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCV 108
Query: 192 ISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
+S CA V C+ + G ++++ VG++L+DMY+K G++ D R+F M
Sbjct: 109 LSVCAGSFNGTVGEQVHCQCVKC---GLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD 165
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP 310
R+V S++S++ G++ + +LF M +P+ T V+ A ++ G G+
Sbjct: 166 RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQI 225
Query: 311 ---------STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
T+ C ++ +L ++G L +A + + M + W +++
Sbjct: 226 HALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIA 277
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 47/108 (43%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++ K ++ W ++I GY G K ++ ++ M++ + + T + AC
Sbjct: 561 IFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGL 620
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
V GQ I + + MI +Y + G LG + + + MP
Sbjct: 621 VGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 319/584 (54%), Gaps = 54/584 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W ++ G G ++++ + SM ++G+ P + T+S+L K+ + G +IH
Sbjct: 256 NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIH 315
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
L D+Y G ++ MY KCG L C++KV D + R++ +W L+ YAN G
Sbjct: 316 C-FFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRF 374
Query: 136 ESAGGLFNELPLKDKV-----AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+ A L EL K+++ W ++TGY N + +A+ +++ AGV + V+
Sbjct: 375 DIALELV-ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTS 433
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPI------------------------------- 219
+IS G + + + C + G P
Sbjct: 434 LISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRA 493
Query: 220 --NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
++VV +ALIDMYSK GS+ A IF ++Q+N+ ++M+ G A+HG+ AI+LF
Sbjct: 494 YDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFH 553
Query: 278 DMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYACMVDLLGRA 325
DM + KP+ +TF +LTAC +GL YGV P+T++YACMVDLL R
Sbjct: 554 DMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARC 613
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
G L+EA+ +E+ P++P WGALL C IH N +A++AA +LF LEP NY+++
Sbjct: 614 GYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMM 673
Query: 386 NIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQAL 445
N+Y M+D+ ++ +K G+ PG+SW++ ++G IH F HP + EI + L
Sbjct: 674 NLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQG-IHVFEVDGKPHPETAEIYEEL 732
Query: 446 GDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPG-ATVRIMKN 504
L+ +++ GY P+ + Y+V +EEK+++L+ H+EKLA+ +GL+ + A VR+MKN
Sbjct: 733 IRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKN 792
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
R+C DCH S + R+I++RD +RFHHF DGKCSC +YW
Sbjct: 793 TRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 166/372 (44%), Gaps = 23/372 (6%)
Query: 3 SFPRLVFEQVK--YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
S RL+ E + K+ LW + ++I+++ M+ G+ +T + +
Sbjct: 105 SCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLH 164
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + G+ +HA + L + V + GMY + + + +V D M VV
Sbjct: 165 ACGRAGALREGRAVHAYALKLA-LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVV 223
Query: 121 SWTELIVAYANNG----DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
W ++ A G +E A + P + W +++G ++ + REA+ M
Sbjct: 224 PWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASM 283
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
G+ D T+ ++ + A G++++ + + P +V G+AL+DMY+KCG
Sbjct: 284 LKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEP--DVYTGTALVDMYAKCG 341
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+D A ++ ++ RN+ +++S++ G+A GR A++L M K P+ T+ G++T
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 297 ACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEP 342
S G +K GV+P+ + ++ G E++ +M V+P
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461
Query: 343 NGGVWGALLGAC 354
+ LL AC
Sbjct: 462 SLVTMSVLLRAC 473
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 138/365 (37%), Gaps = 71/365 (19%)
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
KD V W V + + EAI F MQ GV D T V+ AC + G ++ V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 208 --------------------------------CEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ + G G +VV +A++ ++
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAG---SVVPWNAVVACCARL 235
Query: 236 GSIDDAYRIFVGMKQR----NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
G +DDA + M + NV ++++++ G + HGR A+ + M+K +P+ T
Sbjct: 236 GLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTV 295
Query: 292 IGVLTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+L + ++ GL +G + P +VD+ + G L+ A K+++ +
Sbjct: 296 SSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALE- 354
Query: 341 EPNGGVWGALLG----ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
N W +L+ A + E+ ++ + L+PD I + L Y+ G
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELMKKN--RLDPD-ITTWNGLITGYSMNGQSSQ 411
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
+ R +K G+ N SW G H D + +Q DG
Sbjct: 412 AVLLLRQIKAAGVTPNV-VSWTSLISGSCHNGEYEDSFY------------FCHEMQKDG 458
Query: 457 YQPNL 461
QP+L
Sbjct: 459 VQPSL 463
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 324/554 (58%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKACTEVL 66
VF + +N W+ALI G++L + ++ +L+ M EG+ +S T +++ + C +
Sbjct: 261 VFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLA 320
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ +G Q+HA + G +DL GN+++ MY K G +
Sbjct: 321 DLRMGTQLHA-LLAKSGIHADLTAGNSLLSMYAKAGLI---------------------- 357
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
N M LF+E+ +KD +++ A+++GYVQN K EA F++MQ V+ D
Sbjct: 358 ----NEATM-----LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIA 408
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +I AC+ L +++ C G + ++LIDMY+KCG ID + ++F
Sbjct: 409 TMVSLIPACSHLAALQHGR--CSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC- 305
M R++ S+++MI G+ +HG A LF M +P+ VTFI ++ ACSH GL
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526
Query: 306 -----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P +HY CMVDLL R G L+EA + ++ MP++ + VWGALLGAC
Sbjct: 527 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N ++ + + + +L P+ GN+++LSNI+++AG +D+ + VR + K+ G KK+PG
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 646
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + G +H F GD +HP S +I L ++L ++ GYQ + VL D+ +EEK+
Sbjct: 647 CSWIEIN-GSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKE 705
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L+ HSEKLA+AFG+L+ + T+ + KNLR+C DCH + + V R I+VRD RF
Sbjct: 706 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRF 765
Query: 535 HHFQDGKCSCGNYW 548
HHF++G+CSCG++W
Sbjct: 766 HHFKNGQCSCGDFW 779
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 160/363 (44%), Gaps = 47/363 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R VF+++ + + ALIR Y +G +I LY SM + P +T + KAC
Sbjct: 50 ALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKAC 109
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + D+ G+ IHA +G +DL+V +I +Y++C G + VF +M
Sbjct: 110 SALADLCAGRTIHAHAAAVG-LHTDLFVSTALIDLYIRCARFGPAANVFAKM-------- 160
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGV 181
P++D VAW AM+ GY + AI + MQ G+
Sbjct: 161 -----------------------PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGL 197
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-NVVVGSALIDMYSKCGSIDD 240
+ TLV ++ AQ G + V + V++G+AL+DMY+KC +
Sbjct: 198 RPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVY 257
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACS 299
A R+F GM RN ++S++I GF + R A LF DM V+ + + L C+
Sbjct: 258 ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCA 317
Query: 300 -----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
H L G+ ++ + +AG + EA + +++ ++ +G
Sbjct: 318 SLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-YG 376
Query: 349 ALL 351
ALL
Sbjct: 377 ALL 379
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++F+++ K+ + AL+ GY+ G +++ ++ M+ + P T+ +L AC+ +
Sbjct: 362 MLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLA 421
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+ H ++++ G + + N++I MY KCG + SR+VFD+MP RD+VSW +I
Sbjct: 422 ALQHGRCSHG-SVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMI 480
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y +G +EA F M+ G E D V
Sbjct: 481 AGYGIHG-------------------------------LGKEATTLFLSMKNQGFEPDDV 509
Query: 187 TLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T + +I+AC+ G++ +W + G P + ++D+ ++ G +D+AY+
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGFLDEAYQFI 567
Query: 246 VGM 248
M
Sbjct: 568 QSM 570
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A ++F + + +Y+++I ++ G HAAI L+ M+ PN TF VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 296 TACSHVGLKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACS + C G V TD + ++DL R A + KMP+ +
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-DV 165
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELE 374
W A+L + N + A HL +++
Sbjct: 166 VAWNAMLAG---YANHGMYHHAIAHLLDMQ 192
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W +I GY + G K++ +L+ SM+ +G P T L AC+
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G+ G + M+ + + GFL + + MP + DV W
Sbjct: 522 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGA 581
Query: 125 LIVA 128
L+ A
Sbjct: 582 LLGA 585
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/565 (36%), Positives = 308/565 (54%), Gaps = 52/565 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F ++ E++K + W+A I GY +G +++ + M GI P TL ++ C
Sbjct: 318 FEKMQEEKIKM-DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 64 EVLDVSLGQQIHAQTILL------GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
V + G++IH I G + V N +I MY KC + +R +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+ +D V WT M+ GY Q+ +A+E M
Sbjct: 437 E-----------------------------RDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 178 YAGVET--DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+T + T+ + ACA L ++ + A + + + V + LIDMY+KC
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKC 526
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GSI DA +F M +N +++S++ G+ MHG A+ +F +M + K +GVT + VL
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
ACSH G+ +GVSP +HYAC+VDLLGRAG L AL+++E+MP+EP
Sbjct: 587 YACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPP 646
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
VW A L C+IH E+ + AA + EL + G+Y +LSN+YA+AG W DV+R+R L
Sbjct: 647 PVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSL 706
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
++ G+KK PG SW+EG +G F GD THP++ EI Q L D + R++ GY P
Sbjct: 707 MRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
L+DV DEEK +L HSEKLALA+G+LTT GA +RI KNLR+C DCH S++I
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
+I++RD+ RFHHF++G CSC YW
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 189/380 (49%), Gaps = 32/380 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+++ + W ++I Y G K ++ ++ M E G P + TL + C
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ SLG+Q+H + +++VGN ++ MY KCG + + VF M +DVVSW
Sbjct: 242 LGTHSLGKQLHCFAV-TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 125 LIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++ Y+ G E A LF ++ + D V W+A ++GY Q EA+ +M +G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIA-------EGSGFGPINNVVVGSALIDMYS 233
++ + VTL+ V+S CA +G + + + A +G G N V+ + LIDMY+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI--NQLIDMYA 418
Query: 234 KCGSIDDAYRIFVGM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNGV 289
KC +D A +F + K+R+V +++ MI G++ HG A+ A++L +M + +T+PN
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 290 TFIGVLTACS-----HVGLKCYGVSPSTDHYA-------CMVDLLGRAGCLEEALKMVEK 337
T L AC+ +G + + + A C++D+ + G + +A + +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 338 MPVEPNGGVWGALLGACQIH 357
M + N W +L+ +H
Sbjct: 539 M-MAKNEVTWTSLMTGYGMH 557
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 180/423 (42%), Gaps = 89/423 (21%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+ W +LIR Y G + L+ M P ++T +FKAC E+ V G+ HA
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ L+ GF S+++VGN ++ MY +C L +RKVFD
Sbjct: 153 S-LVTGFISNVFVGNALVAMYSRCRSLSDARKVFD------------------------- 186
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACA 196
E+ + D V+W +++ Y + KP+ A+E F RM G D +TLV V+ CA
Sbjct: 187 ------EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
LG + A S I N+ VG+ L+DMY+KCG +D+A +F M ++V S+
Sbjct: 241 SLGTHSLGKQLHCFAVTSEM--IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 257 SSMILGFAMHGRAHAAIQLFG-----------------------------------DMVK 281
++M+ G++ GR A++LF M+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 282 TETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYAC-----------MVDLLG 323
+ KPN VT I VL+ C+ VG + CY + D ++D+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 324 RAGCLEEALKMVEKM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
+ ++ A M + + P E + W ++G H + A + +FE + N
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 383 ILS 385
+S
Sbjct: 479 TIS 481
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 308/565 (54%), Gaps = 52/565 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F ++ E++K + W+A I GY +G +++ + M GI P TL ++ C
Sbjct: 318 FEQMQEEKIKM-DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 64 EVLDVSLGQQIHAQTILL------GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
V + G++IH I G + V N +I MY KC + +R +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
+ +D V WT M+ GY Q+ +A+E M
Sbjct: 437 E-----------------------------RDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 178 YAGVET--DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+T + T+ + ACA L + + A + + + V + LIDMY+KC
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKC 526
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G I DA +F M ++N +++S++ G+ MHG A+ +F +M + K +GVT + VL
Sbjct: 527 GDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVL 586
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
ACSH G+ +GVSP +HYAC+VDLLGRAG L AL+++E+MP+EP
Sbjct: 587 YACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPP 646
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
VW ALL C+IH E+ + AA + EL + G+Y +LSN+YA+AG W DV+R+R L
Sbjct: 647 PVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSL 706
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
++ G+KK PG SW+EG +G F GD THP++ EI Q L D + R++ GY P
Sbjct: 707 MRHKGIKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGF 765
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
L+DV DEEK +L HSEKLALA+G+LTT GA +RI KNLR+C DCH S++I
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
EI++RD+ RFHHF++G CSC YW
Sbjct: 826 HEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 36/382 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R VF+++ + W ++I Y G K ++ ++ M E G P TL + C
Sbjct: 182 RKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCAS 241
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V SLG+Q H + +++VGN ++ MY K G + + VF MP +DVVSW
Sbjct: 242 VGTRSLGKQFHGFAV-TSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300
Query: 125 LIVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++ Y+ G E A LF ++ + D V W+A ++GY Q EA+ +M +G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIA-------EGSGFGPINNVVVGSALIDMYS 233
++ + VTL+ V+S CA +G + + + A +G G N V+ + LIDMY+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI--NQLIDMYA 418
Query: 234 KCGSIDDAYRIFVGM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT--ETKPNGV 289
KC +D A +F + K+R+V +++ MI G++ HG A+ A++L +M + +T+PN
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 290 TFIGVLTACSHVGLKCYGVSPSTDHYA--------------CMVDLLGRAGCLEEALKMV 335
T L AC+ L + YA C++D+ + G + +A +
Sbjct: 479 TISCALVACA--SLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVF 536
Query: 336 EKMPVEPNGGVWGALLGACQIH 357
+ M +E N W +L+ +H
Sbjct: 537 DNM-MEKNEVTWTSLMTGYGMH 557
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 179/423 (42%), Gaps = 89/423 (21%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
+ W +LIR Y G +S +C M P ++T +FKAC E+ V G HA
Sbjct: 93 YHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHAL 152
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ + GF S+++VGN ++ MY +CG L +RKV
Sbjct: 153 S-RVTGFMSNVFVGNALVAMYSRCGSLSDARKV--------------------------- 184
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACA 196
F+E+P+ D V+W +++ Y + KP+ A+E F +M G D +TLV V+ CA
Sbjct: 185 ----FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+G A S I N+ VG+ L+DMY+K G +D+A +F M ++V S+
Sbjct: 241 SVGTRSLGKQFHGFAVTSEM--IQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSW 298
Query: 257 SSMILGFAMHGRAHAAIQLFG-----------------------------------DMVK 281
++M+ G++ GR A++LF M+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 282 TETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYAC-----------MVDLLG 323
+ KPN VT I VL+ C+ VG + CY + D ++D+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYA 418
Query: 324 RAGCLEEALKMVEKM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYI 382
+ ++ A M + + P E + W ++G H + A + +FE + N
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 383 ILS 385
+S
Sbjct: 479 TIS 481
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 28/310 (9%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ LI Y + G + A L P D W +++ Y N + + + F M
Sbjct: 63 SHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLS 122
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D T V AC ++ ++ + ++ +GF ++NV VG+AL+ MYS+CGS+ D
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGF--MSNVFVGNALVAMYSRCGSLSD 180
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACS 299
A ++F M +V S++S+I +A G+ A+++F M +P+ +T + VL C+
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 300 HVGLKC-----YGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
VG + +G + +++ C+VD+ + G ++EA + MPV+ + W
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWN 299
Query: 349 ALL-GACQIHRNPEIAQIAANHLFE-LEPDKIGNYIILSNI----YASAGMWDDVSRVRR 402
A++ G QI R + A LFE ++ +KI ++ + YA G+ + V R
Sbjct: 300 AMVAGYSQIGRFED-----AVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 403 LLKMTGLKKN 412
+ +G+K N
Sbjct: 355 QMLSSGIKPN 364
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/599 (35%), Positives = 321/599 (53%), Gaps = 64/599 (10%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ + +NP L+ GY G +D+++L +R G + LS+ A
Sbjct: 68 LARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATA 124
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER------ 117
V +G+Q H I G YV + ++ MY +C + + K + E+
Sbjct: 125 HVRSYDMGRQCHGYAI-KAGLAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGS 183
Query: 118 ---------------------------------DVVSWTELIVAYANNGDMESAGGLFNE 144
+V + L+ Y A +F
Sbjct: 184 CVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEV 243
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
LP K+ V+WTA++T Y QN +A++ F M+ GV + T +++CA L +K
Sbjct: 244 LPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNG 303
Query: 205 NWV--CEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
N + C + G G P+ N AL++MYSK GS++DA R+F+ M R+V S++S+I+
Sbjct: 304 NALGACTMKTGHWGLLPVCN-----ALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIII 358
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVS 309
G+A HGRA A++ F DM+ E P+ VTFIGVL+AC+ +GL K GV
Sbjct: 359 GYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK 418
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANH 369
P +HY CMV LL R G L+EA + +E + + W +LL +CQ++RN + A
Sbjct: 419 PGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQ 478
Query: 370 LFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFR 429
+F+L+P +G Y++LSN+YA A WD V +VRRL++ G++K PG SW++ V H F
Sbjct: 479 IFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEV-HVFT 537
Query: 430 AGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFG 489
+ D HP +I + L +L+D+++ GY PN+ L+DV DE+K+ LM HSEKLALAFG
Sbjct: 538 SEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFG 597
Query: 490 LLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
L+ T G +RIMKN+RIC+DCH+ + S GR IVVRD +RFH +DG CSC +YW
Sbjct: 598 LIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 160/377 (42%), Gaps = 51/377 (13%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++SLG+ +HA+ + F D+ N +I +YVKCG LG +R+VFD MP R+ VS L+
Sbjct: 31 ELSLGKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 127 VAYANNGDMESAGGL-------FNELPLKDKVAWTAMVTG-------------------- 159
YA++G A L NE L VA TA V
Sbjct: 89 SGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 160 ---------YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
Y Q A EA++Y ++ + V+ CA + + V
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQ 208
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
A NV VGSAL+DMY KC +A R+F + ++N+ S+++++ + +
Sbjct: 209 ALKRRLEL--NVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFE 266
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-----VSPSTDHYA------CMV 319
A+QLF DM +PN T+ L +C+ + G + T H+ ++
Sbjct: 267 DALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALM 326
Query: 320 DLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG 379
++ ++G +E+A ++ MP ++G R E + + LF E
Sbjct: 327 NMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYV 386
Query: 380 NYIILSNIYASAGMWDD 396
+I + + A G+ D+
Sbjct: 387 TFIGVLSACAQLGLVDE 403
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 307/556 (55%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W A+I G I + ++ +SL+ M G P +TL ++F +
Sbjct: 45 RKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 104
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
VS+GQQIH I G DL V +++ MY++
Sbjct: 105 RSVSIGQQIHGYAIKYG-LELDLVVNSSLAHMYMR------------------------- 138
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
NG ++ + +P+++ VAW ++ G QN P + ++ M+ +G +
Sbjct: 139 ------NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V V+S+C+ L + + AE G + V V S+LI MYSKCG + DA + F
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIH--AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLK 304
+ + +SSMI + HG+ AI+LF M +TE + N V F+ +L ACSH GLK
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLK 310
Query: 305 ------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG P HY C+VDLLGRAGCL++A +++ MP++P+ +W LL
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLS 370
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC IH+N E+AQ + E++P+ Y++L+N++ASA W DVS VR+ ++ +KK
Sbjct: 371 ACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW E +G +H+F+ GD + S EI L +L ++ GY+P+ SVL+D+ +EE
Sbjct: 431 AGISWFE-HKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 489
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L+ HSEKLA+AF L+ GA +RI+KNLR+C DCH+ S ++ REI +RD
Sbjct: 490 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGS 549
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +GKCSCG+YW
Sbjct: 550 RFHHFINGKCSCGDYW 565
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 14/306 (4%)
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ MY K G L + +++ M +++ +S LI Y GD+ SA +F+E+P + W
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
AM+ G +Q E + F M G D TL V S A L + + A
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYA--I 118
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+G ++VV S+L MY + G + D + M RN+ +++++I+G A +G +
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD-----------HYACMVDLLG 323
L+ M + +PN +TF+ VL++CS + ++ G + + ++ +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
+ GCL +A K + E + +W +++ A H + A N + E ++
Sbjct: 239 KCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAF 297
Query: 384 LSNIYA 389
L+ +YA
Sbjct: 298 LNLLYA 303
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/552 (35%), Positives = 304/552 (55%), Gaps = 48/552 (8%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE++ K WT+LI Y+ +G D+I L+ M +G+ P ++++++ AC +
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G+ +H I L V N ++ MY KCG
Sbjct: 772 DKGRDVH-NYIRKNNMALCLPVSNALMDMYAKCG-------------------------- 804
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
ME A +F+++P+KD V+W M+ GY +N+ P EA++ F MQ D +T+
Sbjct: 805 -----SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITM 858
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
++ AC L ++ + +G+ + + V +ALIDMY KCGS+ A +F +
Sbjct: 859 ACLLPACGSLAALEIGRGIHGCILRNGYS--SELHVANALIDMYVKCGSLVHARLLFDMI 916
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG- 307
++++ +++ MI G MHG + AI F M KP+ +TF +L ACSH GL G
Sbjct: 917 PEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGW 976
Query: 308 -----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ P +HYACMVDLL R G L +A ++E MP++P+ +WGALL C+I
Sbjct: 977 GFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRI 1036
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H + E+A+ A H+FELEPD G Y++L+NIYA A W++V ++R + GLKK+PG S
Sbjct: 1037 HHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCS 1096
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E +G F + D HP + I L +L +++ +G+ P +R L + D EK+
Sbjct: 1097 WIEV-QGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVA 1155
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSEKLA+AFG+L G T+R+ KNLR+C+DCH S+ REI++RD+ RFHH
Sbjct: 1156 LCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHH 1215
Query: 537 FQDGKCSCGNYW 548
F+DG CSC ++W
Sbjct: 1216 FKDGFCSCRDFW 1227
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 174/388 (44%), Gaps = 52/388 (13%)
Query: 6 RLVFEQVKYKNP-FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+ + N FLW ++ Y G ++SI L+ M++ GI S+T S + K
Sbjct: 506 RRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFAT 565
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ V ++IH L GF S V N++I Y K G + + K+FDE+ +RDVVSW
Sbjct: 566 LGRVGECKRIHGCVYKL-GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSW-- 622
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+M++G V N A+E+F +M V D
Sbjct: 623 -----------------------------NSMISGCVMNGFSHSALEFFVQMLILRVGVD 653
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPI--NNVVVGSALIDMYSKCGSIDDAY 242
TLV ++ACA +G + + G G V+ + L+DMYSKCG+++DA
Sbjct: 654 LATLVNSVAACANVGSLSLGRAL----HGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 709
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
+ F M Q+ V S++S+I + G AI+LF +M P+ + VL AC+
Sbjct: 710 QAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGN 769
Query: 300 --HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + + C ++D+ + G +EEA + ++PV+ + W ++
Sbjct: 770 SLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMI 828
Query: 352 GACQIHRNP-EIAQIAANHLFELEPDKI 378
G + P E ++ A E PD I
Sbjct: 829 GGYSKNSLPNEALKLFAEMQKESRPDGI 856
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 54/252 (21%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LVF Q+ K+ W +I GY +++ L+ M++E P T++ L AC +
Sbjct: 811 LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLA 869
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +G+ IH IL G++S+L+V N +I MYVKCG L +R +FD +PE+D+++
Sbjct: 870 ALEIGRGIHG-CILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLIT----- 923
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
WT M++G + EAI F++M+ AG++ D +
Sbjct: 924 --------------------------WTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEI 957
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----------SALIDMYSKCG 236
T ++ AC+ G++ G+G N+++ + ++D+ ++ G
Sbjct: 958 TFTSILYACSHSGLLN-----------EGWGFFNSMISECNMEPKLEHYACMVDLLARTG 1006
Query: 237 SIDDAYRIFVGM 248
++ AY + M
Sbjct: 1007 NLSKAYNLIETM 1018
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 47/310 (15%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE-M 114
S++ + C E + G+ +H+ I G + +G ++ MYV CG L R++FD +
Sbjct: 455 SSILQLCAEHKCLQEGKMVHS-VISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHIL 513
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
+ V W ++ YA GD RE+I F+
Sbjct: 514 SDNKVFLWNLMMSEYAKIGDY-------------------------------RESIYLFK 542
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+MQ G+ + T ++ A LG + + GFG N VV ++LI Y K
Sbjct: 543 KMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV--NSLIATYFK 600
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D A+++F + R+V S++SMI G M+G +H+A++ F M+ + T +
Sbjct: 601 SGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNS 660
Query: 295 LTACSHVGLKCYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
+ AC++VG G S ++D+ + G L +A++ EKM +
Sbjct: 661 VAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG-QKT 719
Query: 344 GGVWGALLGA 353
W +L+ A
Sbjct: 720 VVSWTSLIAA 729
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
R A+E Q + E D ++ CA+ ++ V + +G PI V+ G+
Sbjct: 435 RNAVELLRMSQKS--ELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGI-PIEGVL-GA 490
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRN-VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
L+ MY CG++ + RIF + N VF ++ M+ +A G +I LF M K
Sbjct: 491 KLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGIT 550
Query: 286 PNGVTFIGVLTACSHVG 302
N TF +L + +G
Sbjct: 551 GNSYTFSCILKCFATLG 567
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+F+ + K+ WT +I G + G ++I+ + MR GI P T +++ AC+
Sbjct: 910 RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHS 969
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
++ G I L M+ + + G L + + + MP + D W
Sbjct: 970 GLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGA 1029
Query: 125 LIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ + D+E A + EL + + + Y + K E + ER+ G+
Sbjct: 1030 LLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGL 1089
Query: 182 E 182
+
Sbjct: 1090 K 1090
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 305/553 (55%), Gaps = 45/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++K KN W+A+I + GH +++ + M++EGI P T +L T
Sbjct: 168 VFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 227
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +IH I G + N ++ +Y +C
Sbjct: 228 LEELSRIHL-LITEHGLDDTTTMSNALVNVYGRC-------------------------- 260
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G+++ A + E+ + AW ++ GY + + REA+E ++R+Q + D VT
Sbjct: 261 ---ETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVT 317
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V++AC + + A G ++V+V +AL +MYSKCGS+++A RIF
Sbjct: 318 FISVLNACTSSTSLAEGKMIHSNAVECGLD--SDVIVKNALTNMYSKCGSMENARRIFDS 375
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC-- 305
M R+ S++ M+ +A HG + ++L M + K NG+TF+ VL++CSH GL
Sbjct: 376 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEG 435
Query: 306 ----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G+ T+HY C+VDLLGRAG L+EA K + KMP EP W +LLGAC+
Sbjct: 436 CQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACR 495
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H++ + ++AA L EL+P ++LSNIY+ G W + +++RR + +KK PG
Sbjct: 496 VHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGI 555
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S ++ + +HEFR D +HP + EI + +L ++ GY P+ + VL+DV +E+K+
Sbjct: 556 SSIQV-KNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKES 614
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSEKLA+AFGL++T +++ I KNLR+CEDCH S++ GREIVVRDN RFH
Sbjct: 615 LLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFH 674
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC +YW
Sbjct: 675 HFRDGSCSCKDYW 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 18/291 (6%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV T L+ Y G + A +F+ +P + W +M++ Y + + EA F+RMQ
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+ G D VT + ++ AC +++ V E + F ++ VG+ALI MY++C S
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL--DLFVGTALITMYARCRS 161
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++A ++F MKQ+N+ ++S++I FA HG A++ F M + PN VTFI +L
Sbjct: 162 PENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNG 221
Query: 298 CS-----------HVGLKCYGVSPSTDHYACMVDLLGR--AGCLEEALKMVEKMPVEPNG 344
+ H+ + +G+ +T +V++ GR G L+ A ++++M E
Sbjct: 222 FTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQI 280
Query: 345 GVWGALLGACQIH-RNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGM 393
W L+ +H R+ E + E P DK+ +L+ +S +
Sbjct: 281 TAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSL 331
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 158/369 (42%), Gaps = 48/369 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I Y + ++ ++ M+ EG T ++ AC
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ + ++I F DL+VG +I MY +C PE
Sbjct: 125 ENLQHGKHVR-ESISETSFELDLFVGTALITMYARC-----------RSPE--------- 163
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+A +F + K+ + W+A++T + + EA+ YF MQ G+ +
Sbjct: 164 -----------NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNR 212
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC--GSIDDAYR 243
VT + +++ ++ + + + G + + +AL+++Y +C G +D A
Sbjct: 213 VTFISLLNGFTTPSGLEELSRIHLLITEHGLD--DTTTMSNALVNVYGRCETGELDVAEV 270
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
I M ++ + +++ +I G+ +HGR+ A++ + + + VTFI VL AC+
Sbjct: 271 ILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTS 330
Query: 304 KCYGVSPSTDHYACMVD-----------LLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G ++ C +D + + G +E A ++ + MP+ + W +L
Sbjct: 331 LAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQ 389
Query: 353 ACQIHRNPE 361
A H E
Sbjct: 390 AYAQHGESE 398
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 50/269 (18%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++ +++ + W LI GY L G ++++ Y ++ E I T ++ ACT
Sbjct: 270 VILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSST 329
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+ IH+ + G SD+ V N + MY KCG
Sbjct: 330 SLAEGKMIHSNAVECG-LDSDVIVKNALTNMYSKCG------------------------ 364
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
ME+A +F+ +P++ V+W M+ Y Q+ + E ++ +M+ GV+ + +
Sbjct: 365 -------SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 417
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGS----ALIDMYSKCGSI 238
T V V+S+C+ G+ IAEG + G + V + L+D+ + G +
Sbjct: 418 TFVSVLSSCSHAGL---------IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 468
Query: 239 DDAYRIFVGM-KQRNVFSYSSMILGFAMH 266
+A + M + + +++S++ +H
Sbjct: 469 QEAEKYISKMPSEPEIVTWASLLGACRVH 497
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/538 (36%), Positives = 299/538 (55%), Gaps = 47/538 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N W A++ G G ++S+ + MRREG+ P F L ++F+ C +
Sbjct: 193 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
DV G+Q+HA ++ G D+ VG+++ MY++CG L V +P +VS +
Sbjct: 253 RDVVTGRQVHAY-VVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 311
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G QN A+EYF M+ GV D
Sbjct: 312 IA-------------------------------GRTQNGDSEGALEYFCMMRSVGVAADV 340
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V IS+C+ L + + +G + V V + L+ MYS+CG + D+ R+F
Sbjct: 341 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKV--VPVMTCLVHMYSRCGCLGDSERVF 398
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK- 304
G + F S+MI + HG AI+LF M+ +P+ VTF+ +L ACSH GLK
Sbjct: 399 FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 458
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ PS HY C+VDLLGR+GCL+EA ++ MP+ P+G +W LL A
Sbjct: 459 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+ +N ++A+ A + EL+P +Y++LSNI A++ W DVS VR+ ++ ++K P
Sbjct: 519 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 578
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E +G IH+F GD +HP EI + L +++ +++ GY P++ VL+D+ DEEK
Sbjct: 579 GVSWVEL-KGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEK 637
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+ L HSEKLA+AF L+ G +R+MKNLR+C+DCHL + SQV GREIVVRD+
Sbjct: 638 EVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDD 695
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
S LF+AC + + +Q+HA G T D + N ++ Y G L +R++F+ +
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAAT-DRFTANHLMLAYADLGDLTAARELFERI 168
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P R+V+SW L Y NGD+ A LF+E+P ++ W AMV G E++ +F
Sbjct: 169 PRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 228
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M+ G+ D L V CA L + V SG ++ VGS+L MY +
Sbjct: 229 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD--RDMCVGSSLAHMYMR 286
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + + + + ++ S +++I G +G + A++ F M + VTF+
Sbjct: 287 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 346
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
+++CS H + GV C+V + R GCL ++ ++
Sbjct: 347 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERV 397
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 313/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ WT ++ G G +++ ++ MR EG+G +T ++ AC +
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+QIHA I + +++VG+ ++ MY KC + + VF M R+++S
Sbjct: 294 LEEGKQIHAY-ITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIIS------ 346
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WTAM+ GY QNA EA+ F MQ G++ D T
Sbjct: 347 -------------------------WTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L VIS+CA L ++ +A SG + + V +AL+ +Y KCGSI+DA+R+F
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGL--MRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M + S+++++ G+A G+A I LF M+ KP+GVTFIGVL+ACS GL
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG 499
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K +G+ P DHY CM+DL R+G +EA + +++MP P+ W LL +C+
Sbjct: 500 CDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCR 559
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ N EI + AA +L E +P +Y++L +++A+ G W +V+ +RR ++ +KK PG
Sbjct: 560 LRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGC 619
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ + +H F A D +HP S+ I + L L ++ +GY+P++ SVL+DV+D +K
Sbjct: 620 SWIKY-KNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVH 678
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
++ HSEKLA+AFGL+ +RI+KNLR+C DCH S++ GR+I+VRD +RFH
Sbjct: 679 MISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFH 738
Query: 536 HFQDGKCSCGNYW 548
F DG CSCG++W
Sbjct: 739 KFSDGTCSCGDFW 751
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 195/392 (49%), Gaps = 18/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F + ++ + ALI G+ G S+ LY ++ R E + P TLSA+ + +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D +LG +H Q + LG F + +VG+ ++ MY K G + +R+VF EM + VV + LI
Sbjct: 161 DRALGHSVHCQVLRLG-FGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+E A GLF + +D + WT MVTG QN EA++ F RM+ GV D
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +++AC L ++ + + + +NV VGSAL+DMYSKC SI A +F
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYE--DNVFVGSALVDMYSKCRSIRLAEAVFR 337
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M RN+ S+++MI+G+ + + A++ F +M KP+ T V+++C+++
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397
Query: 303 ---LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GAC 354
C + Y +V L G+ G +E+A ++ ++M W AL+ G
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVTGYA 456
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + L L+PD + +LS
Sbjct: 457 QFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
++ N ++ Y K G L +R+VFDEMP+ ++ + L+ A A++ + LF +P +
Sbjct: 49 FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPER 108
Query: 149 DKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
D V++ A++TG+ P +++ Y ++ V +TL +I + L + V
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV 168
Query: 208 -CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
C++ GFG VGS L+DMY+K G I DA R+F M+ + V Y+++I G
Sbjct: 169 HCQVLR-LGFGAY--AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
A LF MV ++ +T+ ++T + GL+
Sbjct: 226 KMIEDAKGLFQLMVDRDS----ITWTTMVTGLTQNGLQ 259
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P +F L+ L A + G+ A+ + +L+ N ++ +
Sbjct: 45 APPTFLLNHLLTAYAKS-----GRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDME 99
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-----KVAWTAMVTGYVQN 163
++F MPERD VS+ LI +++ G + L+ L ++ ++ +AM+ V +
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM--VAS 157
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVG--VISACAQLGVIKYANWVCEIAEGSGFGPINN 221
A A+ + Q + VG ++ A++G+I+ A V + E
Sbjct: 158 ALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA------KT 211
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
VV+ + LI +C I+DA +F M R+ ++++M+ G +G A+ +F M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 282 TETKPNGVTFIGVLTAC 298
+ TF +LTAC
Sbjct: 272 EGVGIDQYTFGSILTAC 288
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 318/561 (56%), Gaps = 50/561 (8%)
Query: 3 SFPRLVFEQVKYK-NPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFK 60
S R VF+++ + N FLW LIR Y G + +I LY +M G + P +FT + K
Sbjct: 120 SLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLK 179
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC +LD+S G+++H + ++ + +D++V +I MY KC GC
Sbjct: 180 ACAALLDLSAGREVHDR-VMRTNWATDVFVCTGLIDMYAKC---GC-------------- 221
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
M+ A +FN+ ++D W +M+ QN +P EA+ M G
Sbjct: 222 --------------MDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEG 267
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ TLV ISA A + + GFG + + ++L+DMY+K G +
Sbjct: 268 IAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKL--KTSLLDMYAKSGWVMV 325
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACS 299
A+ +F + R + S+++MI GF MHG A A +LF M + + P+ +TF+GVL+AC+
Sbjct: 326 AHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACN 385
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H G+ Y + P+ HY C+VD+LG +G +EA +++ M V+P+ G+W
Sbjct: 386 HGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIW 445
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL C+IH+N E+A++A L ELEP+ GNY++LSNIYA +G W++ +RVR+L+
Sbjct: 446 GALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNR 505
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
GLKK SW+E +G H F GD +HP S +I + L L + GY P+ V ++
Sbjct: 506 GLKKIIACSWIEL-KGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHN 564
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V D+EK+ ++ HSE+LA+AFGL++T P + + KNLR+CEDCH+ + SQ+ REI+
Sbjct: 565 VEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREII 624
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD R+HHF +G+CSC ++W
Sbjct: 625 IRDVNRYHHFVNGECSCKDHW 645
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ + ++C V G+Q+HA+ +L+ G D + ++ +Y CG + +R+VFDEMP
Sbjct: 72 ATILRSCVLSRAVRPGRQLHAR-LLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130
Query: 116 ER-DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
+ +V W LI AYA +G E+A L+ +
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAM----------------------------- 161
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+ Y ++ D T V+ ACA L + V + + + +V V + LIDMY+K
Sbjct: 162 -LAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWA--TDVFVCTGLIDMYAK 218
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
CG +D+A+ +F R+ ++SMI +GR A+ L +M P T
Sbjct: 219 CGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATL 275
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+ V+ + L+D+Y+ CG + A R+F M Q NVF ++ +I +A G AAI+L+ M
Sbjct: 102 DAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAM 161
Query: 280 VKT-ETKPNGVTFIGVLTACS---------HVGLKCYGVSPSTDHYAC--MVDLLGRAGC 327
+ KP+ T+ VL AC+ V + + +TD + C ++D+ + GC
Sbjct: 162 LAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGC 221
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
++EA + + + VW +++ AC + P A
Sbjct: 222 MDEAWAVFNDTTIR-DAAVWNSMIAACGQNGRPAEA 256
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/470 (41%), Positives = 281/470 (59%), Gaps = 16/470 (3%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
P +W ALI G+ + S + M R G+ P T + AC + + LG Q+H
Sbjct: 87 TPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVH 146
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ ++ G DL VGN +I MY +C + + ++F+ M R+ VSWT +I + G +
Sbjct: 147 -KCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQV 205
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+ A LF+ +P +D V+WTAM+ GYVQ + REA+E F MQ++ V D T+V V++AC
Sbjct: 206 DQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTAC 265
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
AQLG ++ W S G + VG+AL+DMYSKCGSI A +F M R+ F+
Sbjct: 266 AQLGALETGEWARIYM--SRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFT 323
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------ 303
++++ILG A++G AI +F M++ P+ VTFIGVLTAC+H GL
Sbjct: 324 WTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMT 383
Query: 304 KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
YG++P+ H+ C++DLLGRAG L+EAL+ + MP+ PN +WG LL AC++H N EI
Sbjct: 384 GSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIG 443
Query: 364 QIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRG 423
Q+AA HL EL+ + YI+LSN+YA + W+DV R+R+++ G+KK PG S +E + G
Sbjct: 444 QLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMN-G 502
Query: 424 VIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
IHEF AGD +HP S EI L +L L+ GY P+L + V+ EEK
Sbjct: 503 TIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPDLTEIFVQVTREEK 552
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 37/289 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + ++ WTA+I GY+ G ++++ ++ M+ + FT+ ++ AC ++
Sbjct: 209 RTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQL 268
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ + G D +VGN ++ MY KCG + + VF EM RD +WT +
Sbjct: 269 GALETGEWARIY-MSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAV 327
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I+ A NG E EAI F RM D
Sbjct: 328 ILGLAVNGHGE-------------------------------EAINMFYRMLRVFEAPDE 356
Query: 186 VTLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +GV++AC G++ K ++ + G P NV+ LID+ + G + +A
Sbjct: 357 VTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAP--NVMHFGCLIDLLGRAGKLKEALET 414
Query: 245 FVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
M R N + +++ +HG + QL + + NG+ +I
Sbjct: 415 IGNMPMRPNSAIWGTLLAACRVHGNSEIG-QLAAEHLLELDTENGMVYI 462
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 299/510 (58%), Gaps = 31/510 (6%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L +AC D+ + H + I G + ++ + ++I YV C L + +V R
Sbjct: 17 LLEACKLSQDIRTATETHTRIIRFG-YGTNSSIAASLISTYVNCNQLNLAYQVI-----R 70
Query: 118 DVVSWTE-------LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
V SWT +I ++ G+ E A +F ++P +D V W +M+ GYV+N K EA+
Sbjct: 71 QVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEAL 130
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
F+ M + VE D T VI+ACA+LG + +A W+ ++ N ++ SALID
Sbjct: 131 RSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEV--NFILSSALID 188
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYSKCG I+ A +F +++ +V ++S+I G A+HG A A+ +F M P+ +T
Sbjct: 189 MYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLT 248
Query: 291 FIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
F+G+L ACSH GL Y + P +HY MVDLLGRAG L+EA M+ M
Sbjct: 249 FLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAM 308
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
P+EP+ VW LL AC+ HRN E+ ++A ++ K G+Y++LSNIY S WD+
Sbjct: 309 PMEPDVIVWRILLSACRTHRNTELGEVAVANI---SGPKSGDYVLLSNIYCSQNRWDNAQ 365
Query: 399 RVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQ 458
VR ++K G++K G SW E + V+H FRAGD +HP + + + L L+ R + +G+
Sbjct: 366 EVREMMKEEGVRKRRGKSWFEWE-DVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFV 424
Query: 459 PNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
P+ V+ DVS+EEK+ L HSEKLALA+G+L TSPG +RI KNLRIC DCH ++
Sbjct: 425 PSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMV 484
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S ++ R I++RD +RFH F+ G CSCG+YW
Sbjct: 485 SGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 113/256 (44%), Gaps = 41/256 (16%)
Query: 1 MDSFPRL--------VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS 52
+DSF R+ VF ++ ++ W ++I GY+ G ++++ + +M + P
Sbjct: 86 IDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDK 145
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
FT +++ AC + ++ Q +H ++ + + + +I MY KCG + +++VF+
Sbjct: 146 FTFASVITACARLGALNHAQWLH-DLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFE 204
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ DV W LI A +G +A AM+
Sbjct: 205 SVERNDVSVWNSLINGLAVHG-----------------LALDAMMV-------------- 233
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F +M+ V D +T +G++ AC+ G++K ++ E + + A++D+
Sbjct: 234 FSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENY-YSIKPQLEHYGAMVDLL 292
Query: 233 SKCGSIDDAYRIFVGM 248
+ G +D+AY + M
Sbjct: 293 GRAGLLDEAYAMITAM 308
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE V+ + +W +LI G + G D++ ++ M E + P S T + KAC+
Sbjct: 202 VFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGL 261
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G++ L M+ + + G L + + MP E DV+ W L+
Sbjct: 262 VKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILL 321
Query: 127 VAYANNGDME 136
A + + E
Sbjct: 322 SACRTHRNTE 331
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/604 (34%), Positives = 325/604 (53%), Gaps = 90/604 (14%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N LWTA++ GY G +I + MR EGI FT ++ AC + G Q+
Sbjct: 203 RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQV 262
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCG-----------------------FLGCSRKVF 111
H I+ GF ++++VG+ ++ MY KCG +GC R+
Sbjct: 263 HG-CIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL 321
Query: 112 DE-------------------------------MPERDVVSWTELIVA------------ 128
E M R+ +S LIV
Sbjct: 322 GEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNA 381
Query: 129 ----YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
YA G + A +F ++ KD ++WT++VTG V N EA+ F M+ G+ D
Sbjct: 382 LVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPD 441
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ + V+SACA+L V+++ V SG G +++ V ++L+ MY+KCG I+DA ++
Sbjct: 442 QIVIAAVLSACAELTVLEFGKQVHANFLKSGLG--SSLSVDNSLVSMYAKCGCIEDANKV 499
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M+ ++V +++++I+G+A +GR L +G ++ + +
Sbjct: 500 FDSMEIQDVITWTALIVGYAQNGRGRDHAGLV---------EHGRSYFQSME-------E 543
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
YG+ P +HYACM+DLLGR+G L EA +++ +M V+P+ VW ALL AC++H N E+ +
Sbjct: 544 VYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGE 603
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AAN+LFELEP Y++LSN+Y++AG W++ ++ RRL+K+ G+ K PG SW+E V
Sbjct: 604 RAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKV 663
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKL 484
H F + D +HP + EI + +++ ++ GY P++ L+D+ +E K+ L HSEKL
Sbjct: 664 -HRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKL 722
Query: 485 ALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
A+AFGLLT PGA +RI KNLRIC DCH M S V R +++RD+ FHHF++G CSC
Sbjct: 723 AVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSC 782
Query: 545 GNYW 548
+YW
Sbjct: 783 SDYW 786
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 178/393 (45%), Gaps = 47/393 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ W++LI GY G +++ L+ M+ EG P FT ++ + C+
Sbjct: 92 RKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMY 151
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+QIHA I F S+ +V ++ MY KC + + +F+ P++
Sbjct: 152 VLLEKGKQIHAHAIKTQ-FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK-------- 202
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++ V WTAMVTGY QN +AIE F M+ G+E +
Sbjct: 203 ----------------------RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQ 240
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T +++AC + + V SGFG NV VGSAL+DMYSKCG + +A R+
Sbjct: 241 FTFPSILTACGSISACGFGAQVHGCIVRSGFGA--NVFVGSALVDMYSKCGDLSNARRML 298
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M+ + S++SMI+G G A+ LF M K + T+ VL S V
Sbjct: 299 ETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMR 358
Query: 302 -GLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + + T A +VD+ + G + A + EKM + + W +L+ C
Sbjct: 359 NAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKM-TDKDVISWTSLVTGC 417
Query: 355 QIHRNPEIA--QIAANHLFELEPDKIGNYIILS 385
+ + E A + + PD+I +LS
Sbjct: 418 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 20/324 (6%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R +G +F+ K C ++ L I G S N ++ KCG
Sbjct: 1 MYRLNLGIYTFSR----KVCHQLEHTELNHHIRRFVNSCGTVHSS-SDSNWVLSNLSKCG 55
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ +RK+FD MP+RD SW +I AYAN+G + A LF E P++ + W+++++GY +
Sbjct: 56 RVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCR 115
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
EA+E F MQY G + T V+ C+ +++ + A + F +N
Sbjct: 116 YGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFD--SNA 173
Query: 223 VVGSALIDMYSKCGSIDDAYRIF-VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + L+DMY+KC I +A +F + +RN +++M+ G++ +G H AI+ F DM
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG 233
Query: 282 TETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEE 330
+ N TF +LTAC + G + +G + A +VD+ + G L
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSN 293
Query: 331 ALKMVEKMPVEPNGGVWGALLGAC 354
A +M+E M V+ + W +++ C
Sbjct: 294 ARRMLETMEVD-DPVSWNSMIVGC 316
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 73/226 (32%)
Query: 197 QLGVIKYANWVCEIAEGSGF-----------GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
LG+ ++ VC E + G +++ + ++ SKCG +DDA ++F
Sbjct: 5 NLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLF 64
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M R+ S+++MI +A GR + A +LF + +T S + C
Sbjct: 65 DVMPDRDECSWNTMIGAYANSGRLNEARKLFYE----------TPIRSCITWSSLISGYC 114
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGALLGAC-------- 354
R GC EAL++ +M E PN WG++L C
Sbjct: 115 ------------------RYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEK 156
Query: 355 --QIHRNPEIAQIAAN---------------------HLFELEPDK 377
QIH + Q +N +LFEL PDK
Sbjct: 157 GKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK 202
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 295/509 (57%), Gaps = 40/509 (7%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + +LS KA D Q+HA + LG +D+ + T++ Y KCG L +RK
Sbjct: 111 PDALSLSFALKASARCSDAHTTVQLHALVLRLG-VAADVRLLTTLLDSYAKCGDLASARK 169
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFDEM RDV +W L+ A + A LF+ L Q RE
Sbjct: 170 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL------------ANSFQELPSRE- 216
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
E + VT+V V+SACAQ+G++K +V E A+ FG NV V ++LI
Sbjct: 217 ------------EPNEVTIVAVLSACAQIGLLKDGMYVHEFAK--KFGLDRNVRVCNSLI 262
Query: 230 DMYSKCGSIDDAYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
DMYSKCGS+ A +F +K R + SY++ I +MHG A++LF +M T +P+
Sbjct: 263 DMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEPD 321
Query: 288 GVTFIGVLTACSHVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
GVT++ VL C+H GL G V+P+ HY +VDLLGRAG L EA V MP
Sbjct: 322 GVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMP 381
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
+ +W LLGA ++H E+A++AAN L EL + G+Y++LSN+YAS W DV R
Sbjct: 382 FPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGR 441
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR ++ ++K PG+S+ E D GV+H+F GD HP EI +AL D++ R+ GY+P
Sbjct: 442 VRDTMRSNDVRKVPGFSYTEID-GVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEP 500
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+R++KNLRIC DCH+ S
Sbjct: 501 ETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLIS 560
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ GR IV+RD RFH F+DG+CSC +YW
Sbjct: 561 KAYGRVIVIRDRARFHRFEDGQCSCRDYW 589
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 308/555 (55%), Gaps = 46/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+Q+ + W ++I Y + + M+ G P TL +L +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D + +H + G D+ +GN ++ MY K G L
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL--------------------- 469
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETD 184
+SA +F +P+KD ++W ++TGY QN EAIE ++ M+ + +
Sbjct: 470 ----------DSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V ++ A A +G ++ + + +V V + LID+Y KCG + DA +
Sbjct: 520 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSL 577
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F + Q + +++++I +HG A ++LFG+M+ KP+ VTF+ +L+ACSH G
Sbjct: 578 FYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637
Query: 303 ---------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++ YG+ PS HY CMVDLLGRAG LE A ++ MP++P+ +WGALLGA
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+ + A++ LFE++ +G Y++LSNIYA+ G W+ V +VR L + GLKK P
Sbjct: 698 CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 757
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+S +E +R V F G+ +HP EI + L L ++++ GY P+ VL DV ++EK
Sbjct: 758 GWSTIEVNRKV-DVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEK 816
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ IL +HSE+LA+AFG+++T P + +RI KNLR+C DCH S++ REIVVRD+ R
Sbjct: 817 EHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNR 876
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 877 FHHFKDGICSCGDYW 891
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 207/421 (49%), Gaps = 49/421 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +++ W A+I G I G+ ++ + MR EGI T+ ++ C ++
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+S IH ++ G DL+V N +I MY K G
Sbjct: 330 GDISTAMLIHLY-VIKHGLEFDLFVSNALINMYAKFG----------------------- 365
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E A F ++ + D V+W +++ Y QN P A +F +MQ G + D
Sbjct: 366 --------NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+TLV + S AQ K + V G+ + +VV+G+A++DMY+K G +D A+++F
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGW-LMEDVVIGNAVVDMYAKLGLLDSAHKVF 476
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHV--- 301
+ ++V S++++I G+A +G A AI+++ M + E PN T++ +L A +HV
Sbjct: 477 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536
Query: 302 --GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G+K +G T+ + C++D+ G+ G L +A+ + ++P E + W A++
Sbjct: 537 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISC 595
Query: 354 CQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
IH + E + + ++PD + ++ L + + +G ++ RL++ G+K
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHV-TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 654
Query: 412 N 412
+
Sbjct: 655 S 655
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 165/356 (46%), Gaps = 58/356 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKA 61
S R F+Q+ K+ + W ++I Y+ GH ++I Y + I P +T + KA
Sbjct: 168 SLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA 227
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++D G++IH LG F +++V ++I MY + GF G +R +FD+
Sbjct: 228 CGTLVD---GRKIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGIARSLFDD-------- 275
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+P +D +W AM++G +QN +A++ + M+ G+
Sbjct: 276 -----------------------MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ ++VT+V ++ C QLG I A + I G F ++ V +ALI+MY+K G+++
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF----DLFVSNALINMYAKFGNLE 368
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA + F M +V S++S+I + + A F M +P+ +T + + + +
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 300 HVGLKCYGVSPSTDHYA--------------CMVDLLGRAGCLEEALKMVEKMPVE 341
C S S + +VD+ + G L+ A K+ E +PV+
Sbjct: 429 Q-SRDCKN-SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK 482
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGV 181
T L+ YAN GD+ + F+++P KD AW +M++ YV N EAI +++ + + +
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 182 ETDYVTLVGVISACAQL-GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D+ T V+ AC L K W ++ GF NV V ++LI MYS+ G
Sbjct: 215 RPDFYTFPPVLKACGTLVDGRKIHCWAFKL----GFQ--WNVFVAASLIHMYSRFGFTGI 268
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M R++ S+++MI G +G A A+ + +M K N VT + +L C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 301 VG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+G + +G+ ++++ + G LE+A K ++M + + W +
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNS 387
Query: 350 LLGACQIHRNPEIAQ 364
++ A + + +P A
Sbjct: 388 IIAAYEQNDDPVTAH 402
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G + ++ + + L+++Y+ G + + F + Q++V++++SMI + +G H AI F
Sbjct: 146 GKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCF 205
Query: 277 GD-MVKTETKPNGVTFIGVLTACSHV----GLKCY----GVSPSTDHYACMVDLLGRAGC 327
++ +E +P+ TF VL AC + + C+ G + A ++ + R G
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG-NYIILSN 386
A + + MP + G W A++ + +N AQ A + L E+ + I N++ + +
Sbjct: 266 TGIARSLFDDMPFR-DMGSWNAMISG--LIQNGNAAQ-ALDVLDEMRLEGIKMNFVTVVS 321
Query: 387 IYASAGMWDDVSR--------VRRLLKMTGLKKN------PGYSWLEGDRGVIHEFRAGD 432
I D+S ++ L+ N + LE R + D
Sbjct: 322 ILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD 381
Query: 433 LTHPNSTEIQQALGD-------LLDRLQADGYQPNLRSVL 465
+ NS D ++Q +G+QP+L +++
Sbjct: 382 VVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 320/554 (57%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKACTEVL 66
VF + +N W+ALI G++L + ++ +L+ M EG+ +S T +++ + C +
Sbjct: 262 VFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLA 321
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ +G Q+HA I G +DL N+++ MY K G +
Sbjct: 322 DLHMGTQLHA-LIAKSGIHADLTASNSLLSMYAKAGLIN--------------------- 359
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
A F+E+ +KD +++ A+++G VQN K EA F++MQ +E D
Sbjct: 360 ----------EATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +I AC+ L +++ C G + ++LIDMY+KCG ID + ++F
Sbjct: 410 TMVSLIPACSHLAALQHGK--CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC- 305
M R+V S+++MI G+ +HG A LF M P+ VTFI ++ ACSH GL
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527
Query: 306 -----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P +HY CMVDLL R G L+EA + ++ MP++ + VWGALLGAC
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N ++ + + + +L P+ GN+++LSNI+++AG +D+ + VR + K+ G KK+PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
YSW+E + G +H F GD +HP S +I L +++ ++ GYQ + VL D+ +EEK+
Sbjct: 648 YSWIEIN-GSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKE 706
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L+ HSEKLA+AFG+L+ + T+ + KNLR+C DCH + + V R I+VRD RF
Sbjct: 707 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRF 766
Query: 535 HHFQDGKCSCGNYW 548
HHF++G+CSCGN+W
Sbjct: 767 HHFKNGQCSCGNFW 780
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 71/378 (18%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R VF+++ + + ALIR Y G +I LY SM R + P +T + KAC
Sbjct: 51 ALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKAC 110
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ ++D+ G+ I G +DL+V +I +Y++C G +R VF +MP RDVV+W
Sbjct: 111 SALVDLRAGRTI-HAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGV 181
++ YAN+G AI + MQ + G+
Sbjct: 170 NAMLAGYANHGMYH-------------------------------HAIAHLLDMQDHGGL 198
Query: 182 ETDYVTLVGVISACAQLGVI-------KYANWVC-EIAEGSGFGPINNVVVGSALIDMYS 233
+ TLV ++ AQ G + Y C E E V++G+AL+DMY+
Sbjct: 199 RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE-------EQVLIGTALLDMYA 251
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KC + A R+F GM RN ++S++I GF + R A LF DM+ G+ F+
Sbjct: 252 KCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML-----VEGLCFLS 306
Query: 294 VLTACS-----------HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVE 336
+ S H+G + + + + +A ++ + +AG + EA +
Sbjct: 307 ATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFD 366
Query: 337 KMPVEPNGGVWGALLGAC 354
++ V+ +GALL C
Sbjct: 367 EIAVKDTIS-YGALLSGC 383
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W +I GY + G K++ +L+ M+ +G P T L AC+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G+ G + M+ + + G L + + MP + DV W
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 125 LIVA 128
L+ A
Sbjct: 583 LLGA 586
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A ++F + + +Y+++I ++ G HAAI L+ M++ PN TF VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 296 TACSH-VGLKC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACS V L+ G+ ++DL R A + KMP+ +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELE 374
W A+L + N + A HL +++
Sbjct: 167 VAWNAMLAG---YANHGMYHHAIAHLLDMQ 193
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 304/553 (54%), Gaps = 48/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K WT++I GY+ +G +I L+ M+ G+ P + ++++ AC +
Sbjct: 410 VFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGN 469
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+ +H I ++ +V N + MY KCG
Sbjct: 470 LKSGKIVH-DYIRENNLETNSFVSNALTDMYAKCG------------------------- 503
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
M+ A +F+ + KD ++W M+ GY +N+ P EA+ F MQ + D T
Sbjct: 504 ------SMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTT 556
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ ACA L + + A +G+ + V +A++DMY KCG + A +F
Sbjct: 557 VACILPACASLAALDKGREIHGYALRNGYS--EDKYVTNAVVDMYVKCGLLVLARSLFDM 614
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ +++ S++ MI G+ MHG AI F M T +P+ V+FI +L ACSH GL G
Sbjct: 615 IPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEG 674
Query: 308 ------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ P+ +HYACMVDLL R G L +A K ++ MP++P+ +WGALL C+
Sbjct: 675 WKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCR 734
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH + ++A+ A +FELEP+ G Y++L+NIYA A W++V ++R+ + GLKKNPG
Sbjct: 735 IHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGC 794
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E +G I+ F AGD + P + +I+ L L +++ +GY P L + + EK+
Sbjct: 795 SWIE-IKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEV 853
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFG+L PG T+R+ KNLR+C DCH S+ REI++RD+ RFH
Sbjct: 854 ALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFH 913
Query: 536 HFQDGKCSCGNYW 548
HF+DG CSC YW
Sbjct: 914 HFKDGSCSCRGYW 926
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 46/383 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R+VF+++ FLW +I Y G+ +SI+L+ M GI P S+T S++ K V
Sbjct: 205 RMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAV 264
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G+Q+H LG F S V N++I Y + C++K+FDE+ +R
Sbjct: 265 ARVEEGRQVHGLICKLG-FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDR-------- 315
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
D ++W +M++GYV+N IE F +M GV+ D
Sbjct: 316 -----------------------DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL 352
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+V V ACA +G + V V + L+DMYSKCG ++ A R+F
Sbjct: 353 ATMVNVFVACANIGTLLLGK-VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVF 411
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M ++ V S++SMI G+ G + AI+LF +M P+ +L AC+
Sbjct: 412 ERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLK 471
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H ++ + ++ + D+ + G +++A + M + + W ++G
Sbjct: 472 SGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGGY 530
Query: 355 QIHRNP-EIAQIAANHLFELEPD 376
+ P E + A E +PD
Sbjct: 531 TKNSLPNEALTLFAEMQRESKPD 553
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 175/436 (40%), Gaps = 92/436 (21%)
Query: 31 GHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYV 90
G LK+++ L CS + ++ ++ + C E + G+++ + I G D +
Sbjct: 131 GDLKNAMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRS-IIESSGVMIDGIL 187
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
G ++ MYVKCG L R VF D +S +++ +
Sbjct: 188 GVKLVFMYVKCGDLKEGRMVF------DKLSESKIFL----------------------- 218
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
W M++ Y + E+I F++M G++ + T ++ A + ++ V +
Sbjct: 219 --WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGL 276
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
GF N VV ++LI Y + A ++F + R+V S++SMI G+ +G
Sbjct: 277 ICKLGFNSYNTVV--NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334
Query: 271 AAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPST-----DHYACM 318
I++F M+ + T + V AC+++G L Y + +T +
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 319 VDLLGRAGCLEEALKMVEKMP----------------------------------VEPNG 344
+D+ + G L A+++ E+M V P+
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFE--LEPDK-IGNYIILSNIYASAGMWDDVSRVR 401
++L AC I+ N + +I +++ E LE + + N L+++YA G D V
Sbjct: 455 YAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSN--ALTDMYAKCGSMKDAHDV- 511
Query: 402 RLLKMTGLKKNPGYSW 417
+ +KK SW
Sbjct: 512 ----FSHMKKKDVISW 523
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+ + K+ WT +I GY + G+ ++I+ + MR GI P + ++ AC+
Sbjct: 607 LARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
+ G +I +L M+ + + G L + K MP + D W
Sbjct: 667 HSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIW 726
Query: 123 TELI 126
L+
Sbjct: 727 GALL 730
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 322/560 (57%), Gaps = 53/560 (9%)
Query: 6 RLVFEQVKYKNPF--LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ K P +W A+ GY G +++ LY M + P +F S KAC+
Sbjct: 127 RRVFQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACS 186
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + +G+ IHAQ + +D V N ++G+YV+ +GC FDE+ +
Sbjct: 187 DLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVE---IGC----FDEVLK------- 232
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+F E+P ++ V+W ++ G+ + E + F MQ G+
Sbjct: 233 -----------------VFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGF 275
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN--VVVGSALIDMYSKCGSIDDA 241
++TL ++ CAQ+ + + G N V + ++L+DMY+KCG I
Sbjct: 276 SWITLTTMLPVCAQVTALHSGKEI----HGQILKSRKNADVPLLNSLMDMYAKCGEIGYC 331
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
++F M +++ S+++M+ GF+++G+ H A+ LF +M++ +PNG+TF+ +L+ CSH
Sbjct: 332 EKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHS 391
Query: 302 GLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
GL +GV PS +HYAC+VD+LGR+G +EAL + E +P+ P+G +WG+
Sbjct: 392 GLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGS 451
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
LL +C+++ N +A++ A LFE+EP+ GNY++LSNIYA+AGMW+DV RVR ++ +TG+
Sbjct: 452 LLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGM 511
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPN-STEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KK+ G SW++ + IH F AG + S E ++ +L + ++ GY PN VL+D+
Sbjct: 512 KKDAGCSWIQ-IKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVLHDI 570
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
++E K + HSE+LA F L+ T G +RI KNLR+C DCH +M S+V R IV+
Sbjct: 571 NEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVL 630
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD RFHHF++G CSC +YW
Sbjct: 631 RDTNRFHHFENGSCSCKDYW 650
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 123 TELIVAYANNGDMESAGGLF---NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
T+LI Y+ G + A +F +E P ++ V W AM GY +N EA+ + M
Sbjct: 111 TKLITLYSVCGRVNEARRVFQIDDEKPPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSC 169
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
V+ + AC+ L + G + VV +AL+ +Y + G D
Sbjct: 170 CVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQ-VVNNALLGLYVEIGCFD 228
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+ ++F M QRNV S++++I GFA GR + F M + + +T +L C+
Sbjct: 229 EVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCA 288
Query: 300 HV 301
V
Sbjct: 289 QV 290
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFV--GMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+ N + + LI +YS CG +++A R+F K + +M +G++ +G +H A+ L+
Sbjct: 104 LENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLY 163
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD---HYACMVD------LLG---R 324
DM+ KP F L ACS + G + H D LLG
Sbjct: 164 RDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVE 223
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLG 352
GC +E LK+ E+MP + N W L+
Sbjct: 224 IGCFDEVLKVFEEMP-QRNVVSWNTLIA 250
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 321/554 (57%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKACTEVL 66
VF + +N W+ALI G++L + ++ +L+ M EG+ +S T +++ + C +
Sbjct: 262 VFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLA 321
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ +G Q+HA I G +DL N+++ MY K G +
Sbjct: 322 DLHMGTQLHA-LIAKSGIHADLTASNSLLSMYAKAGLI---------------------- 358
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
N M F+E+ +KD +++ A+++G VQN K EA F++MQ +E D
Sbjct: 359 ----NEATM-----FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V +I AC+ L +++ C G + ++LIDMY+KCG ID + ++F
Sbjct: 410 TMVSLIPACSHLAALQHGK--CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC- 305
M R+V S+++MI G+ +HG A LF M P+ VTFI ++ ACSH GL
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527
Query: 306 -----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG+ P +HY CMVDLL R G L+EA + ++ MP++ + VWGALLGAC
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH+N ++ + + + +L P+ GN+++LSNI+++AG +D+ + VR + K+ G KK+PG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
YSW+E + G +H F GD +HP S +I L +++ ++ GYQ + VL D+ +EEK+
Sbjct: 648 YSWIEIN-GSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKE 706
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+ L+ HSEKLA+AFG+L+ + T+ + KNLR+C DCH + + V R I+VRD RF
Sbjct: 707 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRF 766
Query: 535 HHFQDGKCSCGNYW 548
HHF++G+CSCGN+W
Sbjct: 767 HHFKNGQCSCGNFW 780
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 177/402 (44%), Gaps = 73/402 (18%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
+ R VF+++ + + ALIR Y G +I LY SM R + P +T + KAC
Sbjct: 51 ALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKAC 110
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ ++D+ G+ I G +DL+V +I +Y++C G +R VF +MP RDVV+W
Sbjct: 111 SALVDLRAGRTI-HAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGV 181
++ YAN+G AI + MQ + G+
Sbjct: 170 NAMLAGYANHGMYH-------------------------------HAIAHLLDMQDHGGL 198
Query: 182 ETDYVTLVGVISACAQLGVI-------KYANWVC-EIAEGSGFGPINNVVVGSALIDMYS 233
+ TLV ++ AQ G + Y C E E V++G+AL+DMY+
Sbjct: 199 RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE-------EQVLIGTALLDMYA 251
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KC + A R+F GM RN ++S++I GF + R A LF DM+ G+ F+
Sbjct: 252 KCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML-----VEGLCFLS 306
Query: 294 VLTACS-----------HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVE 336
+ S H+G + + + + +A ++ + +AG + EA +
Sbjct: 307 ATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFD 366
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL--FELEPD 376
++ V+ +GALL C + E A + + +EPD
Sbjct: 367 EIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++ W +I GY + G K++ +L+ M+ +G P T L AC+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V+ G+ G + M+ + + G L + + MP + DV W
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 125 LIVA 128
L+ A
Sbjct: 583 LLGA 586
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
G + A ++F + + +Y+++I ++ G HAAI L+ M++ PN TF VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 296 TACSH-VGLKC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
ACS V L+ G+ ++DL R A + KMP+ +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELE 374
W A+L + N + A HL +++
Sbjct: 167 VAWNAMLAG---YANHGMYHHAIAHLLDMQ 193
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 309/556 (55%), Gaps = 56/556 (10%)
Query: 11 QVKYKNPFLWTALIRGYILQGHLKDSISLYCS---MRREGIGPVSFTLSALFKACTEVLD 67
Q + NP ++ + Q HLK S CS + P ++L ++C
Sbjct: 33 QYQSPNPSFTSSAPQFDNNQTHLKAIPS--CSNPHAESTCLTPTYSNYASLLQSCIARKA 90
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+Q+HAQ + L GF D + ++ +Y C L +R
Sbjct: 91 IKPGKQLHAQ-VCLAGFGFDTVIATKLVNLYCVCDSLSSARL------------------ 131
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
LF+ +P + W ++ GY N A++ + +M G+ D T
Sbjct: 132 -------------LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFT 178
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V+ ACA L I++ + E +G+ +V VG+ALIDMY+KCG + A +F
Sbjct: 179 FPFVLKACAALSAIEHGREIHEHVVQTGWE--KDVFVGAALIDMYAKCGCVGSAREVFDK 236
Query: 248 MKQRN---VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
+ R+ V S+++MI G+AMHG A A+ LF +M + KP+ +TF+GVL+ACSH GL
Sbjct: 237 ILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLL 295
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ Y + P+ HY CMVDLLG +G L+EA ++ +M V P+ GVWGALL
Sbjct: 296 EEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLN 355
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C+IH N E+ +IA L ELEPD GNY+ILSNIYA AG W+ V+++R+L+ LKK+
Sbjct: 356 SCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKS 415
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
SW+E + +H F +GD +HP S EI L + ++ GY P+ SV +DV D+E
Sbjct: 416 IACSWIEV-KNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDE 474
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K ++ +HSE+LA+AFGL++T PG + I KNLRICEDCH+ + S++ REI VRD
Sbjct: 475 KANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVN 534
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHF+DG CSCG+YW
Sbjct: 535 RYHHFKDGVCSCGDYW 550
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 37/250 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S RL+F+++ N FLW LIRGY G + ++ LY M G+ P +FT + KAC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD---V 119
+ + G++IH + ++ G+ D++VG +I MY KCG +G +R+VFD++ RD V
Sbjct: 187 AALSAIEHGREIH-EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSW +I YA +G A LF E+ ++V AKP
Sbjct: 246 VSWNAMITGYAMHGHATEALDLFEEM---NRV------------AKP------------- 277
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D++T VGV+SAC+ G+++ W+ + V + ++D+ G +D
Sbjct: 278 ----DHITFVGVLSACSHGGLLE-EGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLD 332
Query: 240 DAYRIFVGMK 249
+AY + + MK
Sbjct: 333 EAYNLIMQMK 342
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 300/541 (55%), Gaps = 43/541 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ WT +I G I L + + M E + P TL +L C V
Sbjct: 248 LFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGT 307
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ HA +L GF L + +I MY KCG +G +R
Sbjct: 308 LDLGKWFHAY-LLRNGFGMSLALVTALIDMYGKCGQVGYAR------------------- 347
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
LFN + KD W+ +++ Y + + F M V+ + VT
Sbjct: 348 ------------ALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVT 395
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+V ++S CA+ G + W G +V++ +ALI+MY+KCG + A +F
Sbjct: 396 MVSLLSLCAEAGALDLGKWTHAYINRHGLEV--DVILETALINMYAKCGDVTIARSLFNE 453
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
QR++ +++M+ GF+MHG A++LF +M +PN +TF+ + ACSH GL
Sbjct: 454 AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL---- 509
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
+HY C+VDLLGRAG L+EA ++E MP+ PN +WGALL AC++H+N + ++AA
Sbjct: 510 ----MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAA 565
Query: 368 NHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHE 427
+ EL+P G ++ SNIYASA W+DV+ VR + +G+KK PG SW+E G +H
Sbjct: 566 RKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVS-GSVHH 624
Query: 428 FRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALA 487
F++GD +T++ + + ++ +L+ GY PN +VL ++ +EEK+ L HSEKLA A
Sbjct: 625 FKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATA 684
Query: 488 FGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNY 547
FGL++T+PG +RI+KNLRIC+DCH S++ GR I+VRD RFHHF +G CSC Y
Sbjct: 685 FGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGY 744
Query: 548 W 548
W
Sbjct: 745 W 745
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 37/301 (12%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKACT 63
P F Q + + LI Y + S + Y MR + +F L +L KAC
Sbjct: 40 PHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACA 99
Query: 64 EVLDVSLGQQIH--AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
+ LG+++H AQ GF SD++V N ++ MY KCG L +R VFD
Sbjct: 100 QASSGDLGRELHGFAQK---NGFASDVFVCNALMNMYEKCGCLVSARLVFD--------- 147
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
++P +D V+WT M+ YV++ EA+ MQ+ GV
Sbjct: 148 ----------------------QMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGV 185
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ V L+ +I+ L +K V + V + +ALIDMY K G + A
Sbjct: 186 KLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASA 245
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F + +R+V S++ MI G R + F M++ + PN +T + ++T C V
Sbjct: 246 QRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFV 305
Query: 302 G 302
G
Sbjct: 306 G 306
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 54/264 (20%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R +F VK K+ +W+ LI Y + +L+ M + P + T+ +L C
Sbjct: 345 YARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
E + LG+ HA I G D+ + +I MY KCG + +R +F+E +RD+ W
Sbjct: 405 EAGALDLGKWTHAY-INRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMW- 462
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
M+ G+ + +EA+E F M+ GVE
Sbjct: 463 ------------------------------NTMMAGFSMHGCGKEALELFSEMESHGVEP 492
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ +T V + AC+ G++++ +G L+D+ + G +D+A+
Sbjct: 493 NDITFVSIFHACSHSGLMEH------------YG---------CLVDLLGRAGHLDEAHN 531
Query: 244 IFVGMKQR-NVFSYSSMILGFAMH 266
I M R N + +++ +H
Sbjct: 532 IIENMPMRPNTIIWGALLAACKLH 555
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 315/558 (56%), Gaps = 54/558 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K ++ W +I GY QG ++ L+ M P T L ACT +
Sbjct: 218 RKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWTE 124
D+ G+ IH + + G+ SDL +GN ++ MY KC L +R+VF+ + RDV++W
Sbjct: 278 EDLEQGRAIH-RKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNI 336
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
LIVAY VQ + ++A++ F++MQ V +
Sbjct: 337 LIVAY-------------------------------VQYGQAKDALDIFKQMQLENVAPN 365
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+TL V+SACA LG + V IA G +VV+ ++L++MY++CGS+DD
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKA---DVVLENSLMNMYNRCGSLDDTVG 422
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F ++ +++ S+S++I +A HG + ++ F ++++ + VT + L+ACSH G+
Sbjct: 423 VFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGM 482
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+G++P H+ CMVDLL RAG LE A ++ MP P+ W +LL
Sbjct: 483 LKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542
Query: 352 GACQIHRNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
C++H + + A A+ LFELE D+ +LSN+YA AG WDDV + R +
Sbjct: 543 SGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAAR 599
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
KNPG S++E + +HEF AGD +HP I + L +++ GY P++R VL++V +
Sbjct: 600 KNPGCSYIEIN-DTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKE 658
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+++L HSEKLA+A+GL++T PG + I+KNLR C DCH S+++GR+IVVRD
Sbjct: 659 EEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRD 718
Query: 531 NMRFHHFQDGKCSCGNYW 548
+ RFHHF++G CSC +YW
Sbjct: 719 STRFHHFENGSCSCKDYW 736
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 30/294 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +++ N WT ++ + GH ++++ Y M EG+ P C+ D
Sbjct: 14 VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKD 73
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQ +HA + D+ +G +I MY +C L +RK FDEM ++ +V+W LI
Sbjct: 74 LKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIA 133
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ NGD A ++ + MV+ + KP D +T
Sbjct: 134 GYSRNGDHRGALKIYQD-----------MVSKSPEGMKP-----------------DAIT 165
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ AC+ +G I + SG+ ++ +V +ALI+MYSKCGS++ A ++F
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVASGYA--SDSIVQNALINMYSKCGSLESARKVFDR 223
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+K R+V ++++MI G+A G A A++LF M + KPN VTFIG+LTAC+++
Sbjct: 224 LKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y G + A +F+ + + V+WT +V + +N REA+ Y+ RM G+ D
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V I C+ +K + + + ++++G+ALI MY++C ++ A + F M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEF-DIILGTALITMYARCRDLELARKTFDEM 120
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE---TKPNGVTFIGVLTACSHVGLKC 305
++ + +++++I G++ +G A++++ DMV KP+ +TF L ACS VG
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 306 YGVSPSTDHYA-----------CMVDLLGRAGCLEEALKMVEKM 338
G A ++++ + G LE A K+ +++
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY KCGS+ DA +F ++ N S++ ++ FA +G A+ + MV +P+G
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 291 FIGVLTACS 299
F+ + CS
Sbjct: 61 FVVAIGVCS 69
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 316/561 (56%), Gaps = 50/561 (8%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFK 60
D + +F+++ ++ W +L+ G +G+L ++ +C MR E G P TL ++
Sbjct: 190 DEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVS 249
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC + + G+ +H + LG + V N++I MY K GFL
Sbjct: 250 ACAXMGALDEGKSLHGVVVKLG-MSGKAKVVNSLINMYGKLGFL---------------- 292
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
++A LF E+P++ V+W +MV + N + ++ F M+ AG
Sbjct: 293 ---------------DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 337
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T+V ++ AC G+ + A + GF ++++ +AL+++Y+K G ++
Sbjct: 338 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA--DIIIATALLNLYAKLGRLNA 395
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ IF +K R+ ++++M+ G+A+H AI+LF MVK + + VTF +L+ACSH
Sbjct: 396 SEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 455
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL + Y V P DHY+CMVDLLGR+G LE+A ++++ MP+EP+ GVWG
Sbjct: 456 SGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWG 515
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC+++ N E+ + A L L+P NYI+LSNIY++AG+W S+VR L+K
Sbjct: 516 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERR 575
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L +NPG S++E G++ IH F GD HP S EI L +L+ ++ G P VL+D
Sbjct: 576 LTRNPGCSFIEHGNK--IHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHD 633
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +E K ++ HSEKLA+AFGLL T G + I KNLRIC DCH AS + R I+
Sbjct: 634 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 693
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD+ RFHHF DG CSC +YW
Sbjct: 694 IRDSKRFHHFADGLCSCRDYW 714
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 47/315 (14%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+ +L A + VS IHA+ I + SD ++G+ ++ MY K G+ ++++FDEM
Sbjct: 142 VQSLVFAISSCTSVSYCSAIHARVIKSLNY-SDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
P RD+VSW L+ + G + G NA F
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYL-----------------------GACLNA--------FC 229
Query: 175 RMQY-AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
RM+ +G + + VTL+ V+SACA +G + + + G VV ++LI+MY
Sbjct: 230 RMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV--NSLINMYG 287
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
K G +D A ++F M R++ S++SM++ +G A + LF M + P+ T +
Sbjct: 288 KLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVA 347
Query: 294 VLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKMPVEP 342
+L AC+ GL S + C +++L + G L + + E++ +
Sbjct: 348 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DR 406
Query: 343 NGGVWGALLGACQIH 357
+ W A+L +H
Sbjct: 407 DTIAWTAMLAGYAVH 421
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 317/560 (56%), Gaps = 49/560 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREGIGPVSFTLSALFKA 61
S+ R +F V + FL+T+LI+ + S+ Y M + P ++T +++ K+
Sbjct: 61 SYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKS 120
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++ + G+ +H +L+ GF D+YV ++ +Y KCG
Sbjct: 121 CADLSALKHGRVVHGH-VLVHGFGLDVYVQAALVALYGKCG------------------- 160
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
D+ +A +F+++ + VAW +M++GY QN +EAI F+RM+ GV
Sbjct: 161 ------------DLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGV 208
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
E D T V V+SACA LG WV E G+G NVV+G++LI+MY +CG++ A
Sbjct: 209 EPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDL--NVVLGTSLINMYIRCGNVSKA 266
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F MK+RNV ++++MI G+ +G A++LF +M + PN +TF+ VL+AC+H
Sbjct: 267 REVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHA 326
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMV-EKMPVEPNGGVWG 348
GL + Y + P +H C+VD+LGRAG L+EA + E++P P +
Sbjct: 327 GLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILT 386
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
A+LGAC++H+N ++ A HL EP+ +Y+ILSNIYA AG D V VR +
Sbjct: 387 AMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKC 446
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
LKK GYS +E D+ + F GD +H + I L +L+ + GY P SV++++
Sbjct: 447 LKKQVGYSTVEVDQKT-YLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHEL 505
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EE++ L HSEKLA+AFGLL TS G +RI+KNLR+CEDCH + S + REI+V
Sbjct: 506 EEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIV 565
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFHHF+ G CSC +YW
Sbjct: 566 RDKLRFHHFKVGSCSCLDYW 585
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/533 (38%), Positives = 304/533 (57%), Gaps = 54/533 (10%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F+ +LI Y G L ++ ++ R + + ++A + + L Q++ Q
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ L + N M+ MY KCG + ++++FD+MPE+D+VSWT ++V YA G+ ++
Sbjct: 232 --------NSLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDA 283
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV-ETDYVTLVGVISACA 196
A G+F+ +P +D AW A+++ Y Q KP+EA+E F +Q + + D VTL
Sbjct: 284 AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL-------- 335
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+G N + ++LIDMY KCG + A +F +++++VF +
Sbjct: 336 --------------KQGMKL----NCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVW 377
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA 316
S+MI G AMHG AI LF M + + KPN VTF +L ACSHVGL V +
Sbjct: 378 SAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL----VEEGRTFFN 433
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
M + G KMP+ P VWGALLGAC IH N +A+ A + L ELEP
Sbjct: 434 QMELVYG-------------KMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPG 480
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
G Y++LSNIYA AG WD VS +R+L++ GLKK PG S +E D G++HEF GD +HP
Sbjct: 481 NHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD-GIVHEFLVGDNSHP 539
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE-KKRILMTHSEKLALAFGLLTTSP 495
++ +I L +++ RL+ GY PN +L V +E+ K++ L HSEKLA+AFGL++T
Sbjct: 540 SAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQ 599
Query: 496 GATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH S++ REI++RD RFHHF++G CSC +YW
Sbjct: 600 SQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 652
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 118 DVVSWTELIVAYANNG--DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
D S + LI A A + ++ A +F+++P + W ++ Y ++ P +++ F R
Sbjct: 66 DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125
Query: 176 MQYAGVE-TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-GPINNVVVGS------A 227
M + + D T +I A ++L E+ G F G + V++GS +
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELE---------ELFTGKAFHGMVIKVLLGSDVFILNS 176
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI Y+KCG + YR+FV + +R+V S++SMI F G A++LF +M +
Sbjct: 177 LIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNSLTL 236
Query: 288 GVTFIGVLTACSHV--GLKCYGVSPSTDHYACMVDLLGRA--GCLEEALKMVEKMPVEPN 343
+ + T C V + + P D + L+G A G + A + + MP + +
Sbjct: 237 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ-D 295
Query: 344 GGVWGALLGA 353
W AL+ A
Sbjct: 296 IAAWNALISA 305
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 311/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ +++KN F WT L+ G++ G ++I L+ M +EG P L +C
Sbjct: 96 KRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAA 155
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S G++IH+ G SDL N +I MY KCG +G
Sbjct: 156 KALSQGREIHSAAASCG-MDSDLVTANAIINMYGKCGSIG-------------------- 194
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A +F +P K+ ++W+ M+ + QN EA+ +F+ MQ G+E D
Sbjct: 195 -----------EAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDR 243
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V V+ A +G ++ + +G ++VVG+ L++MY KCGS DDA +F
Sbjct: 244 ITYVSVLDAYTSVGALELGKALHVRIVYAGLD--TSIVVGNTLVNMYGKCGSPDDARDVF 301
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
M ++NV S+++M+ + +GR+ A+ LF M +PN +TF+ +L CSH G
Sbjct: 302 DSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFK 361
Query: 303 ---------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G++P H+ C++D+LGR+G LEEA ++++ MPV + +W +LL A
Sbjct: 362 DAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCA 421
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C H++ + A AA F+ EP YI+LSN+YA+ WD+ ++VR+ ++ G++K
Sbjct: 422 CVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQA 481
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E D+ V HEF AGD HP+ + I + L L+ ++ GY+P+ + V++ + +EEK
Sbjct: 482 GRSWIEIDKQV-HEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEK 540
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+L HSEKLA+AFG+ +T P + I+KNLR+C DCH + S V GR I VRD+ R
Sbjct: 541 DEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNR 600
Query: 534 FHHFQDGKCSCGNYW 548
FHHF G+CSCG+YW
Sbjct: 601 FHHFDRGECSCGDYW 615
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 48/357 (13%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
L L + C + G++IH + + G ++ N ++ MY KCG L +++VFD M
Sbjct: 44 LEQLIRRCAGAKALEEGRRIH-RWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAM 102
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
++V S WT ++ G+VQ+ + EAI+ F
Sbjct: 103 QHKNVFS-------------------------------WTMLMAGFVQSGRGVEAIQLFH 131
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
RM G D V L+ I +C + + A G +++V +A+I+MY K
Sbjct: 132 RMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMD--SDLVTANAIINMYGK 189
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGSI +A+ +F M ++NV S+S+MI F + A A+ F M + + + +T++ V
Sbjct: 190 CGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSV 249
Query: 295 LTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
L A + HV + G+ S +V++ G+ G ++A + + M VE N
Sbjct: 250 LDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM-VEKN 308
Query: 344 GGVWGALLGAC-QIHRNPE-IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVS 398
W A+L A Q R+ E +A + L + P+ I IL S D VS
Sbjct: 309 VVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS 365
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV-VVG 225
REA++ E+ AG D L +I CA ++ I G ++ +
Sbjct: 26 REAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGR---RIHRWMDSGTLDRPRFLS 79
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK 285
+ L+DMY KCGS+ +A R+F M+ +NVFS++ ++ GF GR AIQLF M +
Sbjct: 80 NLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGEL 139
Query: 286 PNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKM 334
P+ V + + +C G + +C ++++ G+ G + EA +
Sbjct: 140 PDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAV 199
Query: 335 VEKMPVEPNGGVWGALLGA-CQIHRNPEIAQIAANHLFEL------EPDKIGNYIILSNI 387
+MP E N W ++ A CQ E A F+L E D+I Y+ + +
Sbjct: 200 FTRMP-EKNVISWSTMIAAFCQNELADE-----ALLFFKLMQQEGMELDRI-TYVSVLDA 252
Query: 388 YASAG 392
Y S G
Sbjct: 253 YTSVG 257
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 318/562 (56%), Gaps = 55/562 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREG-IGPVSFTLSALFKACT 63
R VF++++ + WTALI GY+ +L ++I+L+ M +G + P FT S+ FKAC
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D +G+Q+ Q G S+ V N++I M+VK + +++ F+ + E+++VS+
Sbjct: 385 NLSDPRVGKQVLGQA-FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ N + E A L +E+ ++ GV
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERE-----------------------------LGVSA 474
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
T ++S A +G I+ + ++ G N V +ALI MYSKCGSID A R
Sbjct: 475 --FTFASLLSGVANVGSIRKGEQI--HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F M+ RNV S++SMI GFA HG A ++ F M++ KPN VT++ +L+ACSHVGL
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 304 KCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + P +HYACMVDLL RAG L +A + + MP + + VW L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H N E+ ++AA + EL+P++ YI LSNIYA AG W++ + +RR +K L K
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVK 710
Query: 412 NPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV-- 468
G SW+E GD+ IH+F GD HPN+ +I L L+ ++ GY P+ VL+ +
Sbjct: 711 EGGCSWIEVGDK--IHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEE 768
Query: 469 --SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
+ EK+R+L HSEK+A+AFGL++TS VR+ KNLR+C DCH M S V GREI
Sbjct: 769 ENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREI 828
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
V+RD RFHHF+DGKCSC +YW
Sbjct: 829 VLRDLNRFHHFKDGKCSCNDYW 850
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 44/304 (14%)
Query: 8 VFEQVKY---KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
VFE ++ ++ W+A++ Y G D+I ++ G+ P + +A+ +AC+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKC-GFLGCSRKVFDEMPERDVVSWT 123
V +G+ + G F SD+ VG ++I M+VK + KVFD+M E +VV+
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT-- 236
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
WT M+T +Q PREAI +F M +G E+
Sbjct: 237 -----------------------------WTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC---GSIDD 240
D TL V SACA+L + + A SG +++ V +L+DMY+KC GS+DD
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDD--VECSLVDMYAKCSADGSVDD 323
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMH-GRAHAAIQLFGDMV-KTETKPNGVTFIGVLTAC 298
++F M+ +V S++++I G+ + A AI LF +M+ + +PN TF AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 299 SHVG 302
++
Sbjct: 384 GNLS 387
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 65/398 (16%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPV-SFTLSALFKACTEVLDVSLGQQIHAQTILL 81
LI ++ G L+ ++S M R+GI P+ S T S+L K+C D LG+ +HA+ I
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 82 GGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP---ERDVVSWTELIVAYANNGDMESA 138
D + N++I +Y K G + VF+ M +RDVVSW+ ++ Y NNG
Sbjct: 92 D-IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG----- 145
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQYAGVETDYVTLVGVISACAQ 197
+ +AI+ F E ++ V DY VI AC+
Sbjct: 146 --------------------------RELDAIKVFVEFLELGLVPNDYC-YTAVIRACSN 178
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSIDDAYRIFVGMKQRNVFSY 256
+ +G ++V VG +LIDM+ K S ++AY++F M + NV ++
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFE-SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYGV- 308
+ MI G AI+ F DMV + + + T V +AC+ + L + +
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR 297
Query: 309 SPSTDHYAC-MVDLLGRA---GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
S D C +VD+ + G +++ K+ ++M + + W AL+ +N +A
Sbjct: 298 SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLAT 354
Query: 365 IAANHLFEL------EPDKIGNYIILSNIYASAGMWDD 396
A N E+ EP N+ S+ + + G D
Sbjct: 355 EAINLFSEMITQGHVEP----NHFTFSSAFKACGNLSD 388
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 303/556 (54%), Gaps = 49/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ +N W A+I G + G + +S L+ + R G T+ +L + C++
Sbjct: 286 RWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQT 345
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+ +H I F S+L + ++ +Y KC
Sbjct: 346 ASLATGKILHGCAIR--SFESNLILSTAIVDLYSKC------------------------ 379
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
G ++ A +FN + ++ + WTAM+ G QN +A+ F +MQ G+ +
Sbjct: 380 -------GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANS 432
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V ++ +CA LG +K + GF ++V +AL+DMY+KCG I+ A RIF
Sbjct: 433 VTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAF--DIVNMTALVDMYAKCGKINLAERIF 490
Query: 246 V-GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
G ++V ++SMI G+ MHG + A+ ++ M++ KPN TF+ +L+ACSH L
Sbjct: 491 SHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLV 550
Query: 305 CYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G+S P HYAC+VDLL RAG EEA ++EKMP +P V ALL
Sbjct: 551 EQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLS 610
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+ H+N + ++ L L+ G YI+LSNIYA A WD V +R L++ GLKK
Sbjct: 611 GCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKT 670
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYS +E V H F AGD +HPN EI L L ++ GY P+ VL DV +E
Sbjct: 671 PGYSLVETGNWV-HTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEM 729
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K R+L HSE+LA+AFGLLTT G+ +RI KNLR+C DCH S+++ REI+VRD
Sbjct: 730 KVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDAN 789
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +G+CSCG+YW
Sbjct: 790 RFHHFSNGECSCGDYW 805
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 175/362 (48%), Gaps = 48/362 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + K+ W ++I GY+ G + L+ M GI P T+++L +AC + +
Sbjct: 187 VFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGN 246
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ +H + LG +GN D++ T +
Sbjct: 247 LKLGKCMHGYVLGLG-------LGN-------------------------DILVLTSFVD 274
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ GD+ESA +F ++P ++ V+W AM++G V+N E+ + F R+ + D T
Sbjct: 275 MYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTT 334
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPI-NNVVVGSALIDMYSKCGSIDDAYRIFV 246
+V ++ C+Q + +I G +N+++ +A++D+YSKCGS+ A +F
Sbjct: 335 IVSLLQGCSQTASLATG----KILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFN 390
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
MK RNV ++++M++G A +G A A++LF M + N VTF+ ++ +C+H+G
Sbjct: 391 RMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKR 450
Query: 303 -------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
L G + + +VD+ + G + A ++ + + +W +++
Sbjct: 451 GRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG 510
Query: 356 IH 357
+H
Sbjct: 511 MH 512
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 45/356 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q L A++ GY+ G ++++ L+ MR + S + + KAC
Sbjct: 84 RYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASS 143
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LD +G +I + + G + +VG++MI VK G +G +++VFD MP +DVV W +
Sbjct: 144 LDYEMGMEIISSAVE-KGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSI 202
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I GYVQ A + F M +G++
Sbjct: 203 I-------------------------------GGYVQAGCFDVAFQLFFEMHGSGIKPSP 231
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+ +I AC +G +K + G G G N+++V ++ +DMYSK G I+ A +F
Sbjct: 232 ITMTSLIQACGGIGNLKLGKCMHGYVLGLGLG--NDILVLTSFVDMYSKMGDIESARWVF 289
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
M RN+ S+++MI G +G + LF +V++ + T + +L CS
Sbjct: 290 YKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLA 349
Query: 302 ------GLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G + +VDL + G L++A + +M + N W A+L
Sbjct: 350 TGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAML 404
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ AY++ +E+A +F++ + AM+ GY+Q+ + RE +E F M+ +E
Sbjct: 68 TKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLE 127
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D + + ACA + Y + I+ G N VGS++I K G I +A
Sbjct: 128 VDSCSCTFALKACAS--SLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQ 185
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F GM ++V ++S+I G+ G A QLF +M + KP+ +T ++ AC +G
Sbjct: 186 RVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIG 245
Query: 303 L----KC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
KC G+ VD+ + G +E A + KMP N W A++
Sbjct: 246 NLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTR-NLVSWNAMI 304
Query: 352 GAC 354
C
Sbjct: 305 SGC 307
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 324/562 (57%), Gaps = 54/562 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF++ KN F+W AL++ L H ++++ M R G+ S++ + KAC V
Sbjct: 128 RQVFDETPVKNIFVWNALLKALALADHGDEALARLADMGRLGVPVDSYSYTHGLKACIAV 187
Query: 66 LDVSLG-----QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
+++HA I G + +V T+I Y K G
Sbjct: 188 SASHAPASARVREVHAHAIRRG-YALHTHVATTLIDCYAKLG------------------ 228
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
IV YA + +F +P ++ V+W+AM+ Y +N +P +AIE F+ M +
Sbjct: 229 -----IVRYAES--------VFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASD 275
Query: 181 VE--TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + +T+V V++ACA + + + + GF + +V+ +AL+ MY +CG +
Sbjct: 276 ADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVL--NALMAMYMRCGCL 333
Query: 239 DDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ IF + +R+V S++S+I G+ MHG A+Q+F +M+ P+ +TFI VL A
Sbjct: 334 EVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGA 393
Query: 298 CSHVGLKC-----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CSH GL YGV+P +HYACMVDLLGRAG L+EA++++ M +EP+ V
Sbjct: 394 CSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQV 453
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WGALLGAC+IH + E A+IA +HLF+LEP GNY++L++IYA A + + V ++ LL+
Sbjct: 454 WGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEE 513
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
L+K G SW+E + +H F + D +P ++Q +G+ + +++ GY P+ VLY
Sbjct: 514 HALEKVTGCSWIEVKKK-LHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLY 572
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ EEK+RIL+ HSEKLA+AFGL+ T G +RI KNLR+CEDCH S+ REI
Sbjct: 573 DIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREI 632
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
VVRD RFHHF+DG CSCG+YW
Sbjct: 633 VVRDVNRFHHFRDGVCSCGDYW 654
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 54/302 (17%)
Query: 84 FTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT--ELIVAYANNGDMESAGGL 141
F SD ++ +I Y G L +R+VFDE P +++ W +A A++GD
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGD------- 156
Query: 142 FNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVI 201
EA+ M GV D + + AC +
Sbjct: 157 --------------------------EALARLADMGRLGVPVDSYSYTHGLKACIAVSA- 189
Query: 202 KYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+A + E G + V + LID Y+K G + A +F M +RNV S+S
Sbjct: 190 SHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWS 249
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETK--PNGVTFIGVLTACSHVG-------LKCYGV 308
+MI +A + R AI+LF DM+ ++ PN +T + VL AC+ V L Y +
Sbjct: 250 AMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYIL 309
Query: 309 SPSTDHYACMVDLL----GRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR-NPEIA 363
D +++ L R GCLE + + + + W +L+ +H PE
Sbjct: 310 RRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAV 369
Query: 364 QI 365
Q+
Sbjct: 370 QV 371
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 317/555 (57%), Gaps = 51/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ WT +I G+ G ++ L+ ++ EGI +S++ AC+ +
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S ++IH+ I G SDL + N ++ +Y +CG
Sbjct: 500 ISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECG------------------------- 532
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+++ A +F + KD V+WT+M++ YV N EA+E F M+ GVE D ++
Sbjct: 533 ------NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 586
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV ++SA A L +K + GF + + S L+DMY++CG+++ + +F
Sbjct: 587 LVSILSAAASLSALKKGKEIHGFLIRKGF--VLEGSLASTLVDMYARCGTLEKSRNVFNF 644
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC-- 305
++ +++ ++SMI + MHG AAI LF M P+ + F+ VL ACSH GL
Sbjct: 645 IRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 704
Query: 306 ----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
Y + P +HYAC+VDLLGRA LEEA + V+ M VEP VW ALLGACQ
Sbjct: 705 RRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQ 764
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ +IAA L E++P+ GNY+++SN+Y++ W DV VR +K +GLKKNPG
Sbjct: 765 IHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGC 824
Query: 416 SWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEK 473
SW+E G++ +H F A D +HP S EI L + ++L + GY + VL++ +EEK
Sbjct: 825 SWIEVGNK--VHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 882
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++L HSE+LA+A+G+LTT GA++RI KNLR+C DCH F S+ RE+V+RD R
Sbjct: 883 VQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANR 942
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSCG+ W
Sbjct: 943 FHHFKGGVCSCGDVW 957
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 142/301 (47%), Gaps = 33/301 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + +K F W A+I Y+ G S+ LY MR GI + T + KAC + D
Sbjct: 136 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 195
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G ++H I G+ S ++V N+++GMY KC L +R++FD MPE++
Sbjct: 196 RRYGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE--------- 245
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D V+W +M++ Y N + EA+ F MQ A + + T
Sbjct: 246 ---------------------DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 284
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V + AC IK ++ S + NV V +ALI MY++ G + +A IF
Sbjct: 285 FVAALQACEDSSFIKQGMFIHATVLKSSY--YINVFVANALIAMYARFGKMGEAANIFYN 342
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M + S++SM+ GF +G H A+Q + +M KP+ V I ++ A + G +G
Sbjct: 343 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402
Query: 308 V 308
+
Sbjct: 403 M 403
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 57/372 (15%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +++ G++ G +++ Y MR G P + ++ A + G QIHA
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYA- 409
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ G SDL VGN+++ MY K CS K D
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKF----CSMKYMD--------------------------- 438
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+++P KD V+WT ++ G+ QN A+E F +Q G++ D + + ++ AC+ L
Sbjct: 439 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+I + G ++++V+ + ++D+Y +CG++D A R+F ++ ++V S++SM
Sbjct: 499 LISSVKEIHSYIIRKG---LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 555
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGV 308
I + +G A+ A++LF M +T +P+ ++ + +L+A + H L G
Sbjct: 556 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 615
Query: 309 SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH----------R 358
+ +VD+ R G LE++ + V + +W +++ A +H R
Sbjct: 616 VLEGSLASTLVDMYARCGTLEKS-RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 674
Query: 359 NPEIAQIAANHL 370
E IA +H+
Sbjct: 675 RMEDESIAPDHI 686
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 38/255 (14%)
Query: 49 GPVSFTL----SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL 104
P F+L S++ + C +S GQQ+HA I + +++ ++ MY KCG L
Sbjct: 71 SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL 130
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
+ K+FD MP + + +W +I AY NG+
Sbjct: 131 VDAEKLFDGMPHKTIFTWNAMIGAYVTNGE------------------------------ 160
Query: 165 KPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
P ++E + M+ +G+ D T ++ AC L +Y V +A G+ I V V
Sbjct: 161 -PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSI--VFV 217
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
++++ MY+KC ++ A ++F M ++ +V S++SMI ++ +G++ A++LFG+M K
Sbjct: 218 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 277
Query: 284 TKPNGVTFIGVLTAC 298
PN TF+ L AC
Sbjct: 278 LAPNTYTFVAALQAC 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
N+V + + L+ MY KCG + DA ++F GM + +F++++MI + +G +++L+ +
Sbjct: 111 FNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYRE 170
Query: 279 MVKTETKPNGVTFIGVLTAC-----SHVGLKCYGVSPSTDHYA------CMVDLLGRAGC 327
M + + TF +L AC G + +G++ + + +V + +
Sbjct: 171 MRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 230
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
L A ++ ++MP + + W +++ A
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISA 256
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 310/556 (55%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ F + +IRG + L++++ LY M GI P +FT + KAC+ ++
Sbjct: 87 IFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVA 146
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIHA + G D++V N +I MY KC
Sbjct: 147 LKEGVQIHAH-VFNAGLEVDVFVQNGLISMYGKC-------------------------- 179
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYV 186
G +E AG +F ++ K +W++++ + E + M G +
Sbjct: 180 -----GAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEES 234
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAYRI 244
LV +SAC LG + G I+ NVVV ++LIDMY KCGS++ +
Sbjct: 235 ILVSALSACTHLGSPNLGRCI----HGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCV 290
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +N +SY+ MI G A+HGR A+++F DM++ P+ V ++GVL+ACSH GL
Sbjct: 291 FQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLV 350
Query: 304 ----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+C+ + P+ HY CMVDL+GRAG L+EA +++ MP++PN VW +LL
Sbjct: 351 KEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLS 410
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N EI +IAA+++F+L G+Y++L+N+YA A W +V+R+R + L +
Sbjct: 411 ACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQT 470
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E +R V ++F + D + P I + + +L+ +GY P++ VL DV ++E
Sbjct: 471 PGFSLVEANRNV-YKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDE 529
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HS+KLA+AF L+ TS G+ VRI +NLR+C DCH + S + REI VRD+
Sbjct: 530 KRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDSN 589
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 590 RFHHFKDGTCSCKDYW 605
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G ME A +F ++ + M+ G V + EA+ + M G+E D T V+
Sbjct: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVL 138
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
AC+ L +K + +G +V V + LI MY KCG+I+ A +F M +++
Sbjct: 139 KACSLLVALKEGVQIHAHVFNAGLEV--DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKS 196
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVGL----KC-Y 306
V S+SS+I A H + L GDM + + + L+AC+H+G +C +
Sbjct: 197 VASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIH 256
Query: 307 GV------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RN 359
G+ + ++D+ + G LE+ L + + M N + ++ IH R
Sbjct: 257 GILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNM-AHKNRYSYTVMIAGLAIHGRG 315
Query: 360 PEIAQIAANHLFE-LEPDKI 378
E ++ ++ L E L PD +
Sbjct: 316 REALRVFSDMLEEGLTPDDV 335
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 117/295 (39%), Gaps = 72/295 (24%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTE 64
+VFEQ+ K+ W+++I + + + L M REG S +SAL ACT
Sbjct: 187 VVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSAL-SACTH 245
Query: 65 VLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +LG+ IH ILL + ++ V ++I MYVKCG L VF M ++
Sbjct: 246 LGSPNLGRCIHG--ILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKN----- 298
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ ++T M+ G + + REA+ F M G+
Sbjct: 299 --------------------------RYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTP 332
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V VGV+SAC+ G++K GF N +
Sbjct: 333 DDVVYVGVLSACSHAGLVK-----------EGFQCFNRMQ-------------------- 361
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
F M + + Y M+ + GRA + + + KPN V + +L+AC
Sbjct: 362 -FEHMIKPTIQHYGCMV---DLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSAC 412
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+N+V AL S+ GS++ A IF +++ F Y++MI G A+ L+ +M
Sbjct: 67 SNLVASCAL----SRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEM 122
Query: 280 VKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCL 328
++ +P+ T+ VL ACS H + G+ ++ + G+ G +
Sbjct: 123 LERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAI 182
Query: 329 EEALKMVEKMPVEPNGGVWGALLGA 353
E A + E+M E + W +++GA
Sbjct: 183 EHAGVVFEQMD-EKSVASWSSIIGA 206
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/555 (37%), Positives = 316/555 (56%), Gaps = 51/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ K+ WT +I G+ G ++ L+ ++ EGI +S++ AC+ +
Sbjct: 476 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S ++IH+ I G SDL + N ++ +Y +CG
Sbjct: 536 ISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECG------------------------- 568
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+++ A +F + KD V+WT+M++ YV N EA+E F M+ GVE D ++
Sbjct: 569 ------NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 622
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV ++SA A L +K + GF + + S L+DMY++CG+++ + +F
Sbjct: 623 LVSILSAAASLSALKKGKEIHGFLIRKGF--VLEGSLASTLVDMYARCGTLEKSRNVFNF 680
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC-- 305
++ +++ ++SMI + MHG AAI LF M P+ + F+ VL ACSH GL
Sbjct: 681 IRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 740
Query: 306 ----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
Y + P +HY C+VDLLGRA LEEA + V+ M VEP VW ALLGACQ
Sbjct: 741 RRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQ 800
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH N E+ +IAA L E++P+ GNY+++SN+YA+ W DV VR +K +GLKKNPG
Sbjct: 801 IHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGC 860
Query: 416 SWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEK 473
SW+E G++ +H F A D +HP S EI L + ++L + GY + VL++ +EEK
Sbjct: 861 SWIEVGNK--VHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 918
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++L HSE+LA+A+G+LTT GA++RI KNLR+C DCH F S+ RE+V+RD R
Sbjct: 919 VQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANR 978
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ G CSCG+ W
Sbjct: 979 FHHFKGGVCSCGDVW 993
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 33/295 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + +K F W A+I Y+ G S+ LY MR GI + T + KAC + D
Sbjct: 172 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 231
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G ++H I G+ S ++V N+++GMY KC L +R++FD MPE++
Sbjct: 232 RRCGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE--------- 281
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D V+W +M++ Y N + EA+ F MQ A + + T
Sbjct: 282 ---------------------DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 320
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V + AC IK ++ S + NV V +ALI MY++ G + +A IF
Sbjct: 321 FVAALQACEDSSFIKQGMFIHATVLKSSY--YINVFVANALIAMYARFGKMGEAANIFYN 378
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M + S++SM+ GF +G H A+Q + +M KP+ V I ++ A + G
Sbjct: 379 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSG 433
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 57/372 (15%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +++ G++ G +++ Y MR G P + ++ A + G QIHA
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYA- 445
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ G SDL VGN+++ MY K CS K D
Sbjct: 446 MKNGLDSDLQVGNSLVDMYAKF----CSMKYMD--------------------------- 474
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+++P KD V+WT ++ G+ QN A+E F +Q G++ D + + ++ AC+ L
Sbjct: 475 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+I + G ++++V+ + ++D+Y +CG++D A R+F ++ ++V S++SM
Sbjct: 535 LISSVKEIHSYIIRKG---LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 591
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGV 308
I + +G A+ A++LF M +T +P+ ++ + +L+A + H L G
Sbjct: 592 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 651
Query: 309 SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH----------R 358
+ +VD+ R G LE++ + V + +W +++ A +H R
Sbjct: 652 VLEGSLASTLVDMYARCGTLEKS-RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 710
Query: 359 NPEIAQIAANHL 370
E IA +H+
Sbjct: 711 RMEDESIAPDHI 722
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 38/255 (14%)
Query: 49 GPVSFTL----SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFL 104
P F+L S++ + C +S GQQ+HA I + +++ ++ MY KCG L
Sbjct: 107 SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL 166
Query: 105 GCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNA 164
+ K LF+ +P K W AM+ YV N
Sbjct: 167 VDAEK-------------------------------LFDGMPHKTIFTWNAMIGAYVTNG 195
Query: 165 KPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
+P ++E + M+ +G+ D T ++ AC L + V +A G+ I V V
Sbjct: 196 EPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSI--VFV 253
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
++++ MY+KC ++ A ++F M ++ +V S++SMI ++ +G++ A++LFG+M K
Sbjct: 254 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 313
Query: 284 TKPNGVTFIGVLTAC 298
PN TF+ L AC
Sbjct: 314 LAPNTYTFVAALQAC 328
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
N+V + + L+ MY KCG + DA ++F GM + +F++++MI + +G +++L+ +
Sbjct: 147 FNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYRE 206
Query: 279 MVKTETKPNGVTFIGVLTAC-----SHVGLKCYGVSPSTDHYA------CMVDLLGRAGC 327
M + + TF +L AC G + +G++ + + +V + +
Sbjct: 207 MRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 266
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
L A ++ ++MP + + W +++ A
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISA 292
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 317/555 (57%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + ++ WT ++ G+ G +++ + MR +GI +T ++ AC +
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+QIHA I+ + +++VG+ ++ MY KC + + F M ++++S
Sbjct: 286 SALEQGKQIHAY-IIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIIS---- 340
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
WTA++ GY QN EA+ F MQ G++ D
Sbjct: 341 ---------------------------WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VIS+CA L ++ +A SG ++ + V +AL+ +Y KCGSI+DA+R+F
Sbjct: 374 FTLGSVISSCANLASLEEGAQFHCLALVSGL--MHYITVSNALVTLYGKCGSIEDAHRLF 431
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M + S+++++ G+A GRA I LF M+ + KP+GVTFIGVL+ACS G
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE 491
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P DHY CM+DL R+G L+EA + +++MP+ P+ WG LL A
Sbjct: 492 KGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EI Q AA +L E++P +Y++L +++A+ G W+ V+++RR ++ +KK P
Sbjct: 552 CRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEP 611
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F A D +HP S I + L L ++ +GY+P++ SVL+DV+D +K
Sbjct: 612 GCSWIKY-KNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
++ HSEKLA+AFGL+ +RI+KNLR+C DCH S++ GR+I+VRD +R
Sbjct: 671 VHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVR 730
Query: 534 FHHFQDGKCSCGNYW 548
FH F +G CSCG++W
Sbjct: 731 FHKFSNGVCSCGDFW 745
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 208/400 (52%), Gaps = 23/400 (5%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSAL 58
MDS +F + ++ + A+I G+ G ++ LY ++ R G + P T+SA+
Sbjct: 91 MDS----LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAM 146
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
A + + D +LG+Q H Q + LG F + +VG+ ++GMY K G +G +++VFDEM ++
Sbjct: 147 VMAASALGDRALGRQFHCQILRLG-FGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKN 205
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VV + +I +E A LF + +D + WT MVTG+ QN +A+ +F RM++
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+ D T +++AC L ++ + + + +NV VGSAL+DMYSKC SI
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYD--DNVFVGSALVDMYSKCRSI 323
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A F M +N+ S++++I+G+ +G + A+++F +M + P+ T V+++C
Sbjct: 324 KPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSC 383
Query: 299 SHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+++ C + HY +V L G+ G +E+A ++ ++M W
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS-W 442
Query: 348 GALL-GACQIHRNPEIAQIAANHLF-ELEPDKIGNYIILS 385
AL+ G Q R E + L +++PD + +LS
Sbjct: 443 TALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLS 482
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 11/258 (4%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P+S +AL A + G +H + ++ N ++ Y K G +R+
Sbjct: 4 PLSSQYAALLSAAARTEPHAAGA-LHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARR 62
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD P ++ ++ L+ A+ ++ LF + +D V++ A++ G+ A
Sbjct: 63 VFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARA 122
Query: 170 IEYFERMQYAG--VETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGS 226
+ + + AG V +T+ ++ A + LG + C+I GFG N VGS
Sbjct: 123 VRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILR-LGFGV--NAFVGS 179
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
L+ MY+K G I DA R+F M +NV Y++MI G A +LF M T
Sbjct: 180 PLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVM----TDR 235
Query: 287 NGVTFIGVLTACSHVGLK 304
+ +T+ ++T + GL+
Sbjct: 236 DCITWTTMVTGFTQNGLE 253
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 308/556 (55%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+++ + + +I Y + S+ + M+ G +F + + +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G+Q+H Q LL S L+VGN+++ MY KC ++F+E EL
Sbjct: 365 SSLQMGRQLHCQA-LLATADSILHVGNSLVDMYAKC-------EMFEE---------AEL 407
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I F LP + V+WTA+++GYVQ ++ F +M+ + + D
Sbjct: 408 I---------------FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V+ A A + + SG + NV GS L+DMY+KCGSI DA ++F
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSG--NLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M RN S++++I A +G AAI F M+++ +P+ V+ +GVLTACSH G
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG++P HYACM+DLLGR G EA K++++MP EP+ +W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 354 CQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N +A+ AA LF +E + Y+ +SNIYA+AG W+ V V++ ++ G+KK
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
P YSW+E + IH F + D THPN EI + + +L ++ +GY+P+ SV+ DV ++
Sbjct: 691 PAYSWVEVNHK-IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM 749
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HSE+LA+AF L++T G + +MKNLR C DCH + S+++ REI VRD
Sbjct: 750 KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTS 809
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +G CSCG+YW
Sbjct: 810 RFHHFSEGVCSCGDYW 825
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 179/387 (46%), Gaps = 50/387 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
++FE++ K+ + LI GY G +SI L+ MR+ G P FT S + KA +
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D +LGQQ+HA ++ G F+ D VGN ++ Y K D V T +
Sbjct: 265 DFALGQQLHALSVTTG-FSRDASVGNQILDFYSK----------------HDRVLETRM- 306
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
LF+E+P D V++ +++ Y Q + ++ +F MQ G +
Sbjct: 307 --------------LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 187 TLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++S A L ++ + C+ + ++ VG++L+DMY+KC ++A IF
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILH---VGNSLVDMYAKCEMFEEAELIF 409
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
+ QR S++++I G+ G A ++LF M + + + TF VL A +
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G + + +VD+ + G +++A+++ E+MP + N W AL+ A
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAH 528
Query: 355 QIHRNPEIAQIAANHLFE--LEPDKIG 379
+ + E A A + E L+PD +
Sbjct: 529 ADNGDGEAAIGAFAKMIESGLQPDSVS 555
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF +D N ++ ++ G + +RKV+DEMP ++ VS +I + GD+ SA
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET--DYVTLVGVISACA 196
LF+ +P + V WT ++ Y +N+ EA + F +M + T D+VT ++ C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
V A GF + V + L+ Y + +D A +F + +++ ++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGV 308
+++I G+ G +I LF M ++ +P+ TF GVL A VGL + +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 144/363 (39%), Gaps = 46/363 (12%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFK 60
S R +F+ + + WT L+ Y H ++ L+ M R P T + L
Sbjct: 96 SSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
C + + + Q+HA + LG FD P V
Sbjct: 156 GCNDAVPQNAVGQVHAFAVKLG----------------------------FDTNPFLTVS 187
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ L+ +Y ++ A LF E+P KD V + ++TGY ++ E+I F +M+ +G
Sbjct: 188 NV--LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ T GV+ A L + ++ +GF + VG+ ++D YSK + +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS--RDASVGNQILDFYSKHDRVLE 303
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+F M + + SY+ +I ++ + A++ F +M F +L+ ++
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 301 VG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L C + + D +VD+ + EEA + + +P + W A
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTA 422
Query: 350 LLG 352
L+
Sbjct: 423 LIS 425
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 312/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N W A++ G ++++ L+ M P ++L ++ + C +
Sbjct: 157 LFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGA 216
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQ+HA ++ GF +L VG ++ MY+K G + +V + MP+ +V
Sbjct: 217 LLAGQQVHA-YVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLV------- 268
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AW +++G Q ++ + M+ AG D +T
Sbjct: 269 ------------------------AWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKIT 304
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V VIS+C++L ++ + AE G + V V S+L+ MYS+CG + D+ + F+
Sbjct: 305 FVSVISSCSELAILCQGKQI--HAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLE 362
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK--- 304
K+R+V +SSMI + HG+ AI+LF +M + N +TF+ +L ACSH GLK
Sbjct: 363 CKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKG 422
Query: 305 ---------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
YG+ HY C+VDLLGR+GCLEEA M+ MPV+ + +W LL AC+
Sbjct: 423 LGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACK 482
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH+N EIA+ A+ + ++P +Y++L+NIY+SA W +VS VRR +K +KK PG
Sbjct: 483 IHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGI 542
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E + +H+F GD HP EI Q L +L ++ GY P+ SVL+D+ +EEK++
Sbjct: 543 SWVEV-KNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQ 601
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL HSEKLA+AF L+ T G +R+MKNLR+C DCH+ + S++ EI+VRD+ RFH
Sbjct: 602 ILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFH 661
Query: 536 HFQDGKCSCGNYW 548
HF++G CSCG+YW
Sbjct: 662 HFKNGTCSCGDYW 674
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 24/375 (6%)
Query: 30 QGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLY 89
+GH++++ + S I S L +AC + VSLG+Q+H+ I G +SD +
Sbjct: 51 KGHIREAFESFLS----EIWAEPRLFSNLLQACIPLKSVSLGKQLHS-LIFTSGCSSDKF 105
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
+ N ++ +Y K G L + +FD MP R+++S +I AY G++ESA LF+E+P ++
Sbjct: 106 ISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRN 165
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
W AMVTG + EA+ F RM D +L V+ CA LG + V
Sbjct: 166 VATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHA 225
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
GF N+VVG +L MY K GS+ D R+ M ++ ++++++ G A G
Sbjct: 226 YVMKCGFEC--NLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYF 283
Query: 270 HAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC-----------M 318
+ + M +P+ +TF+ V+++CS + + C G + +
Sbjct: 284 EGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSL 343
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
V + R GCL++++K + E + +W +++ A H E A N E+E + +
Sbjct: 344 VSMYSRCGCLQDSIKTFLECK-ERDVVLWSSMIAAYGFHGQGEEAIKLFN---EMEQENL 399
Query: 379 -GNYI-ILSNIYASA 391
GN I LS +YA +
Sbjct: 400 PGNEITFLSLLYACS 414
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/614 (33%), Positives = 325/614 (52%), Gaps = 69/614 (11%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M S R VF+++ +N WT+++RGY+ +G + ++ L+ M + + + L L +
Sbjct: 93 MISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIE 152
Query: 61 -----ACTEVLDVSLGQQIHAQTILLGGFTSD-----------------LYVGNTMIGMY 98
+ D+ + + A T ++GG S+ + +MI Y
Sbjct: 153 DGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGY 212
Query: 99 VKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK---------- 148
+ +RK+F+ MP+++ V+WT ++ Y +G + A LF +P+K
Sbjct: 213 AMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIM 272
Query: 149 ---------------------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D W+A++ Y + EA+ F MQ GV ++ +
Sbjct: 273 GFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPS 332
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++ ++S C L + + V S F ++ V S LI MY KCG + R+F
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDL--DIYVSSVLITMYIKCGDLVTGKRVFDR 390
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG----- 302
+++ ++S+I G+A HG A+++F +M + P+ +TFIGVL+AC + G
Sbjct: 391 FSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEG 450
Query: 303 ------LKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+K Y V T+HYACMVDLLGRAG L EA+ ++E MPVE + VWGALL AC+
Sbjct: 451 LEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACR 510
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
H+N ++A+IAA L +LEP G YI+LSN+YAS W DV+ +R+ ++ + K+PG
Sbjct: 511 THKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGC 570
Query: 416 SWLEGDRGVIHEFR-AGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E D V H F G +HP I + L L L+ GY P+ V++DV +E+K
Sbjct: 571 SWIEVDNKV-HMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKV 629
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSEK+A+A+GLL G +R+MKNLR+C DCH + +QV GREI++RD RF
Sbjct: 630 HSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRF 689
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSC ++W
Sbjct: 690 HHFKDGLCSCRDFW 703
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 44/361 (12%)
Query: 53 FTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD 112
F+ SA C LGQ A+ I + + N ++ Y ++K+FD
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+MPER+ +SW L+ Y NG + A +F+++P ++ V+WT+MV GYVQ EA
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELL 131
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F RM V + V L G+I + G + A + ++ P+ +VV + +I
Sbjct: 132 FWRMPEKNVVSWTVMLGGLI----EDGRVDEARRLFDMI------PVKDVVASTNMIGGL 181
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
G + +A IF M QRNV +++SMI G+AM+ + A +LF M N VT+
Sbjct: 182 CSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM----PDKNEVTWT 237
Query: 293 GVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+L + R+G + EA ++ + MPV+P G ++G
Sbjct: 238 AMLKGYT------------------------RSGRINEAAELFKAMPVKPVAACNGMIMG 273
Query: 353 ACQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
N E+ + A +F+ +K G + L IY G + + L++ G++
Sbjct: 274 ---FGLNGEVGK--ARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRP 328
Query: 412 N 412
N
Sbjct: 329 N 329
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 51/285 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ ++ K W A++ GY ++ L+ M P T+S
Sbjct: 36 RNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM------PERNTIS--------- 80
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
N ++ YVK G + +RKVFD+MPER+VVSWT +
Sbjct: 81 -------------------------WNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSM 115
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y G ++ A LF +P K+ V+WT M+ G +++ + EA F D
Sbjct: 116 VRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF----------DM 165
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + V+++ +G + + E E P NVV +++I Y+ +D A ++F
Sbjct: 166 IPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF 225
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGV 289
M +N ++++M+ G+ GR + A +LF M VK NG+
Sbjct: 226 EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGM 270
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 316/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS-FTLSALFKACTE 64
R +F+++ ++ F WTA+I G + ++++ LY M++ + T+S+ A
Sbjct: 204 RNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAA 263
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + +G++IH I+ G SD V +++ MY KC
Sbjct: 264 IPSLHMGKKIHGH-IMRMGLDSDEVVWCSLLDMYGKC----------------------- 299
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
G +E A +F+++ +D V+WT M+ Y++N + E F + + + +
Sbjct: 300 --------GSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPN 351
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T GV++ACA L + GF ++ SAL+ MYSKCG I++A +
Sbjct: 352 DFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSA--ASALVHMYSKCGDIENAKSV 409
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F + Q ++FS++S+++G+A HG+ A+ F ++K+ TKP+G+ FIGVL+AC+H GL
Sbjct: 410 FEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLV 469
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ +G++ + DHYAC++DLL RAG EA ++ +MP++P+ +W ALLG
Sbjct: 470 DKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLG 529
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH N E+A+ AA LFE+EP+ Y+ L+NIYASAGM + + +R + G+ K
Sbjct: 530 GCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKK 589
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E R V H F GD +HP S EI + L +L R++ GY P+ VL+DV E+
Sbjct: 590 PGMSWIEIRREV-HVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQ 648
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L HSEKLA+AFG+++T G +++ KNLR C DCH + S + GR+I+VRD+
Sbjct: 649 KEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSN 708
Query: 533 RFHHFQDGKCSCGNYW 548
RFH F+ G CSC +YW
Sbjct: 709 RFHCFEGGSCSCKDYW 724
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 44/390 (11%)
Query: 30 QGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLY 89
Q L++++ L + + P + L K C + + G+Q+HA G LY
Sbjct: 101 QSRLREAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSI--GLY 154
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD 149
+ N ++ MY KCG L + KVFDEM RD+ SW +I Y G+ E A LF+++P +D
Sbjct: 155 ISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRD 214
Query: 150 KVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
+WTA+++G VQ+ +P EA+E + MQ + DY + C + + +
Sbjct: 215 NFSWTAIISGCVQHNRPEEALELYRLMQ----KHDY----SKSNKCTISSALAASAAIPS 266
Query: 210 IAEGSGF-------GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ G G ++ VV +L+DMY KCGSI++A IF M++R+V S+++MI
Sbjct: 267 LHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHT 326
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHY 315
+ +GR LF ++ + PN TF GVL AC+ + + Y V D +
Sbjct: 327 YLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386
Query: 316 ----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
+ +V + + G +E A + E +P +P+ W +LL H + A H F
Sbjct: 387 SSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHD----KALHFF 441
Query: 372 EL------EPDKIGNYIILSNIYASAGMWD 395
EL +PD I +LS A AG+ D
Sbjct: 442 ELLLKSGTKPDGIAFIGVLSAC-AHAGLVD 470
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/563 (35%), Positives = 318/563 (56%), Gaps = 52/563 (9%)
Query: 3 SFPRLVFEQVKYKNPFLW-TALIRGYILQGHL----KDSISLYCSMRREGIGPVSFTLSA 57
++ R VF+++ + +W L+RGY G +++ ++ M EG+ P ++T +
Sbjct: 84 AYARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVS 143
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L KAC G+Q H + G + YV T+I MY +CG
Sbjct: 144 LLKACASARAGEEGRQAHGVAVKAGAAEHE-YVAPTLINMYAECG--------------- 187
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+ +A +F+ + + V++ AM+T V+++ P EA+ F MQ
Sbjct: 188 ----------------DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQ 231
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G++ VTL+ V+SACA LG ++ W+ + + V V +ALIDMY+KCGS
Sbjct: 232 AKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL--VKVNTALIDMYAKCGS 289
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++DA +F M+ R+ ++S M++ +A HG AI +F +M K KP+ VTF+GVL A
Sbjct: 290 LEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
Query: 298 CSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CSH G+ + YG+ HY C+ DLL R+G LE A K ++++P++P +
Sbjct: 350 CSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAIL 409
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LL AC H + ++ + + EL+ G+Y+I SN+ A+ G W++++ VR+L+
Sbjct: 410 WRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSE 469
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+ K PG S +E D ++HEF AGD +HP+S E ++ + +++++L+ GY PN V +
Sbjct: 470 KGVVKVPGCSSIEID-NMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFH 528
Query: 467 -DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ +EEK L HSEKLA++FGLL T+PG T+RI+KNLR+C DCH S V R
Sbjct: 529 VEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRR 588
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF+DG CSCG+YW
Sbjct: 589 IILRDLNRFHHFEDGVCSCGDYW 611
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 316/563 (56%), Gaps = 56/563 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREG---IGPVSFTLSALFKACT 63
+ + N F W LI+ Y H + +I LY ++ E + P T + KAC
Sbjct: 37 ILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACA 96
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSW 122
+ + G+Q+HA + LG F D Y+ N++I Y CG+L +RKVFD M E R+VVSW
Sbjct: 97 YLFSLFEGKQVHAHVLKLG-FELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+I +YA GD + +F E M+ Y E
Sbjct: 156 NVMIDSYAKVGDYDIVLIMFCE-----------MMKVY---------------------E 183
Query: 183 TDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T+ VI AC LG + WV + + + +V+V + L+DMY KCGS++ A
Sbjct: 184 PDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIA 243
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSH 300
++F GM R+V S++S+ILGFA+HG+A AA+ F MVK E PN +TF+GVL+AC+H
Sbjct: 244 KQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNH 303
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ K Y V PS HY C+VDL RAG ++EAL +V +MP++P+ +W
Sbjct: 304 SGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWR 363
Query: 349 ALLGAC-QIHRNPEIAQIAANHLFELEPDKIGN-YIILSNIYASAGMWDDVSRVRRLLKM 406
+LL AC + H + E+++ A +FE G Y++LS +YASA W+DV +R+L+
Sbjct: 364 SLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMND 423
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR-SVL 465
G+ K PG S +E + G HEF AGD HP S +I + + ++ ++L++ GY P+ + L
Sbjct: 424 KGVSKKPGCSLIEIN-GAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGYLPDYSGAPL 482
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D +E K+ + HSE+LA+AFGLL + P +R+ KNLR+C DCH S++ E
Sbjct: 483 IDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCNDCHKVTKLISRIYNVE 542
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD +RFHHF+DG CSC +YW
Sbjct: 543 IIVRDRVRFHHFKDGSCSCMDYW 565
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 289/490 (58%), Gaps = 19/490 (3%)
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTELIVAYANN 132
H Q + G + V N ++ +Y G L +R+VFD D SW ++ Y
Sbjct: 139 HGQALKHGALAHPV-VTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKC 197
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
GD+E+A +F +P + V+W+AM+ ++ + EA+ F++M G D V L V+
Sbjct: 198 GDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVL 257
Query: 193 SACAQLGVIKYANWVCEI--AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
ACA LG ++ WV AEG G P +NV++ +AL+DMY KCG +D+A+ +F G++
Sbjct: 258 KACAHLGALERGRWVHRFLKAEGLGRSP-DNVMLETALVDMYCKCGCMDEAWWVFDGVQS 316
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------- 302
++V +++MI G AM+G A++LF M+ PN TF+ VL AC+H G
Sbjct: 317 QDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEI 376
Query: 303 ---LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRN 359
+ +G+ P +HY C+ DLLGRAG LEEA ++ MP+EP+ WGAL+ +C +H N
Sbjct: 377 FRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNN 436
Query: 360 PEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE 419
+ + L ELEPD G Y++L N+YA G+W+D +R++++ G KK G S++E
Sbjct: 437 VGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIE 496
Query: 420 GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK-RILM 478
+ G++HEFR+GD HP + +I L D+ RLQ GY + VL D+ DEE K L
Sbjct: 497 WN-GLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLS 555
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSE+LALAFG+L T +RI+KNLR+C DCH++ S++ REI++RD RFH F+
Sbjct: 556 YHSERLALAFGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLYQREIIMRDRHRFHLFR 615
Query: 539 DGKCSCGNYW 548
G CSC ++W
Sbjct: 616 GGVCSCNDFW 625
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 107/307 (34%), Gaps = 67/307 (21%)
Query: 16 NPFLWTALIRGY-------------------------------ILQGHLKDSISLYCSMR 44
+ F W ++ GY I G +++ ++ M
Sbjct: 183 DAFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMM 242
Query: 45 REGIGPVSFTLSALFKACTEVLDVSLGQQIHA--QTILLGGFTSDLYVGNTMIGMYVKCG 102
G P + LS++ KAC + + G+ +H + LG ++ + ++ MY KCG
Sbjct: 243 GNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCG 302
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ + VFD + +DVV W AM+ G
Sbjct: 303 CMDEAWWVFDGVQSQDVVLW-------------------------------NAMIGGLAM 331
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N + A+E F RM G + T V V+ AC G + + G P
Sbjct: 332 NGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREH 391
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
L D+ + G +++A + + M + + + +++ MH ++ +++
Sbjct: 392 Y--GCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIE 449
Query: 282 TETKPNG 288
E G
Sbjct: 450 LEPDDGG 456
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 99/268 (36%), Gaps = 24/268 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V+ ++ LW A+I G + GH K ++ L+ M G P T + ACT
Sbjct: 310 VFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGR 369
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G++I G + G + + + G L + V +MP E W L+
Sbjct: 370 VDEGKEIFRSMCDHGIEPRREHYG-CLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALM 428
Query: 127 ---VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ + N G E G EL D + + Y N +A + M+ G +
Sbjct: 429 SSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKK 488
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK---CGSIDD 240
+ L I++ V E G P + + L DM + G + D
Sbjct: 489 E-----------TGLSFIEWNGLVHEFRSGDTRHPQTRQIY-ALLEDMEQRLQLIGYVKD 536
Query: 241 AYRIFVGMKQR----NVFSYSSMILGFA 264
++ + M N SY S L A
Sbjct: 537 TSQVLMDMDDEEDKGNTLSYHSERLALA 564
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 291/508 (57%), Gaps = 21/508 (4%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
L L ++ +D+ +IH++ I TS + + M+ YV C KV D++
Sbjct: 11 LYNLLQSGKTSMDIKTLSKIHSRIITFSYGTSPSLMASLMLK-YVHCNCRSIVYKVIDQV 69
Query: 115 --PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
D+V +I + A +FN++ +D V W M+ GYV+ A+ EA+
Sbjct: 70 FCWSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRL 129
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M + VE D T VI+ CA+LG +K+A WV E+ N ++ SALIDMY
Sbjct: 130 FRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIEL--NFILSSALIDMY 187
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
SKCG I A IF G+++ NV +++MI G A+HG A AI++F M P+ +TF+
Sbjct: 188 SKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFL 247
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
G+LTACSH GL Y V P +HY MVDLLGRAG LEEA M++ MP+
Sbjct: 248 GILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPM 307
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
EP+ +W ALLGAC+ ++ PE+ + A ++ L G+Y++LSNIY S WD V
Sbjct: 308 EPDVVIWRALLGACRTYKKPELGEAAMANISRLRS---GDYVLLSNIYCSQKRWDTAQGV 364
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
++K G+ K G S E G +H F+AGD +HP + I + L L+ R + GY P
Sbjct: 365 WEMMKKKGVHKVRGKSCFEWA-GFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPT 423
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
V DVS+EEK+ L HSEKLALA+G+L T+ GA VRI KNLRIC DCH ++ S+
Sbjct: 424 TDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSR 483
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
++ R I+VRD +RFH F++G CSCG+YW
Sbjct: 484 LLSRVIIVRDRIRFHRFENGLCSCGDYW 511
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VF +++ ++ W +I GY+ + ++++ L+ M + + P +T +++ C ++
Sbjct: 96 KMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKL 155
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ Q +H + ++ + + + +I MY KCG + ++++FD + +V W
Sbjct: 156 GALKHAQWVH-ELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIW--- 211
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AM++G + +AI+ F +M+ V D
Sbjct: 212 ----------------------------NAMISGLAVHGLALDAIKVFTKMEVENVLPDA 243
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T +G+++AC+ G++K ++ S + ++ A++D+ + G +++A+ +
Sbjct: 244 ITFLGILTACSHCGLVKEGRKYFDLMR-SRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMI 302
Query: 246 VGM 248
M
Sbjct: 303 KSM 305
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 315/559 (56%), Gaps = 52/559 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVS---FTLSALFKAC 62
R +F+++ ++ F W+A++ ++ G + ++++Y M RE G + FT S+ A
Sbjct: 113 RALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAA 172
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T G+++H ++ G +D V + + MY K G L +R VFD MP RDVVSW
Sbjct: 173 TAARCARAGRELHCH-VVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSW 231
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
TAM+ Y + E F RM +G+
Sbjct: 232 -------------------------------TAMLDRYFDAGRDGEGFRLFVRMMRSGIL 260
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T GV+ ACA+ K V S G ++ GSAL+ MYSK G + A
Sbjct: 261 PNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTG--DSCFAGSALVHMYSKYGDMGTAM 318
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F GM + ++ S+++MI G+A +G+ A+ F ++ + +P+ VTF+GVL+AC+H G
Sbjct: 319 RVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAG 378
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG+ + DHYAC++DLL R+G E A M+ MPV+PN +W +L
Sbjct: 379 LVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASL 438
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C+IH+N +A AA LFE+EP+ Y+ L+NIYAS G++D+V +RR +++ G+
Sbjct: 439 LGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGIT 498
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K P SW+E G R +H F GD +HP + EI L L +++ +GY + VL+DV
Sbjct: 499 KMPASSWIEVGTR--VHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVE 556
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
DE+K++ + HSE+LA+AFG++ T G+ +++ KNLRIC DCH + S+++ REI+VR
Sbjct: 557 DEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVR 616
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D+ RFHHF++G CSC +YW
Sbjct: 617 DSNRFHHFKNGSCSCRDYW 635
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 146/304 (48%), Gaps = 23/304 (7%)
Query: 110 VFDEMPERDVVSWTELIVAYANNGD-MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+ +P DV S+ L+ A + + SA LF+ +P +D +W+A+V+ +V++ +PR
Sbjct: 83 LLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRA 142
Query: 169 AIEYFERMQY----AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
A+ + RM +G + ++ + +A A C + G + VV
Sbjct: 143 ALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRR---GIDADAVV 199
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
SAL DMY+K G +DDA +F M R+V S+++M+ + GR +LF M+++
Sbjct: 200 WSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGI 259
Query: 285 KPNGVTFIGVLTACSH-----VGLKCYG-VSPSTDHYAC-----MVDLLGRAGCLEEALK 333
PN T+ GVL AC+ +G + +G ++ S +C +V + + G + A++
Sbjct: 260 LPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMR 319
Query: 334 MVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASA 391
+ MP +P+ W A++ + P+ A + L PD + +LS A A
Sbjct: 320 VFRGMP-KPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSAC-AHA 377
Query: 392 GMWD 395
G+ D
Sbjct: 378 GLVD 381
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 293/546 (53%), Gaps = 47/546 (8%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ WT +I GY +++ + M GI L+ AC + + GQQI
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ + GF+SDL N ++ +Y +CG
Sbjct: 614 HAQACV-SGFSSDLPFQNALVTLYSRCG-------------------------------K 641
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+E + F + D +AW A+V+G+ Q+ EA+ F RM G++ + T + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
++ +K V + +G+ + V +ALI MY+KCGSI DA + F+ + +N
Sbjct: 702 ASETANMKQGKQVHAVITKTGYD--SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++++I ++ HG A+ F M+ + +PN VT +GVL+ACSH+GL
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG+SP +HY C+VD+L RAG L A + +++MP++P+ VW LL AC +H+N EI
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 879
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ AA+HL ELEP+ Y++LSN+YA + WD R+ +K G+KK PG SW+E +
Sbjct: 880 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV-K 938
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
IH F GD HP + EI + DL R GY + S+L ++ E+K I+ HSE
Sbjct: 939 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSE 998
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA++FGLL+ + +MKNLR+C DCH ++ S+V REI+VRD RFHHF+ G C
Sbjct: 999 KLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGAC 1058
Query: 543 SCGNYW 548
SC +YW
Sbjct: 1059 SCKDYW 1064
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 46/360 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + + +N LW ++ Y L L++S ++ M+ E I P +T ++ K C + D+
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+QIH+Q I+ F + YV + +I MY K G L +W ++++
Sbjct: 507 ELGEQIHSQ-IIKTNFQLNAYVCSVLIDMYAKLGKLD--------------TAW-DILIR 550
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+A KD V+WT M+ GY Q +A+ F +M G+ +D V L
Sbjct: 551 FAG----------------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+SACA L +K + A SGF +++ +AL+ +YS+CG I+++Y F
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFS--SDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------- 299
+ + ++++++ GF G A+++F M + N TF + A S
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 300 --HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
H + G T+ ++ + + G + +A K ++ + N W A++ A H
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 34/299 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ ++ K+ W A+I G ++I L+C M GI P + S++ AC
Sbjct: 240 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + +G+Q+H + L GF+SD YV N ++ +Y G L + +F M +RD V++
Sbjct: 300 KIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI G Q +A+E F+RM G+E
Sbjct: 359 TLI-------------------------------NGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TL ++ AC+ G + + GF NN + G AL+++Y+KC I+ A
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS-NNKIEG-ALLNLYAKCADIETALD 445
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F+ + NV ++ M++ + + + ++F M E PN T+ +L C +G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 61/386 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC---TE 64
VF+++ + F W +I+ + + + L+ M E + P T S + +AC +
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
DV +QIHA+ IL G V N +I +Y + GF+ +R+V
Sbjct: 202 AFDVV--EQIHAR-ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV-------------- 244
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F+ L LKD +W AM++G +N EAI F M G+
Sbjct: 245 -----------------FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+SAC ++ ++ + + GF ++ V +AL+ +Y G++ A I
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS--SDTYVCNALVSLYFHLGNLISAEHI 345
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F M QR+ +Y+++I G + G A++LF M +P+ T ++ ACS G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 303 -----LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-- 351
L Y G + + +++L + +E AL + VE N +W +L
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Query: 352 --------GACQIHRNPEIAQIAANH 369
+ +I R +I +I N
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 32/195 (16%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L FEQ + + W AL+ G+ G+ ++++ ++ M REGI +FT + KA +E
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+Q+HA I G+ S+ V N +I MY KCG + + K F E+ ++ VSW +I
Sbjct: 707 NMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY+ +G EA++ F++M ++ V ++V
Sbjct: 766 NAYSKHG-------------------------------FGSEALDSFDQMIHSNVRPNHV 794
Query: 187 TLVGVISACAQLGVI 201
TLVGV+SAC+ +G++
Sbjct: 795 TLVGVLSACSHIGLV 809
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 149/351 (42%), Gaps = 52/351 (14%)
Query: 42 SMRREGIGPVSFTLSALFKACTEVL-DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
S+ GI P TL L + C + + G+++H+Q + LG ++
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN-------------- 119
Query: 101 CGFLGC-SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
GC S K+FD Y GD+ A +F+E+P + W M+
Sbjct: 120 ----GCLSEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-GP 218
E F RM V + T GV+ AC + G + + + V +I + G
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAF-DVVEQIHARILYQGL 218
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
++ VV + LID+YS+ G +D A R+F G++ ++ S+ +MI G + + AI+LF D
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 279 MVKTETKPNGVTFIGVLTACS-----HVGLKCYG----VSPSTDHYAC--MVDLLGRAGC 327
M P F VL+AC +G + +G + S+D Y C +V L G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 328 LEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HLFELEPD 376
L A + M + + + L+ G Q + ++ HL LEPD
Sbjct: 339 LISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 293/546 (53%), Gaps = 47/546 (8%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ WT +I GY +++ + M GI L+ AC + + GQQI
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ + GF+SDL N ++ +Y +CG
Sbjct: 574 HAQACV-SGFSSDLPFQNALVTLYSRCG-------------------------------K 601
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+E + F + D +AW A+V+G+ Q+ EA+ F RM G++ + T + A
Sbjct: 602 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 661
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
++ +K V + +G+ + V +ALI MY+KCGSI DA + F+ + +N
Sbjct: 662 ASETANMKQGKQVHAVITKTGYD--SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 719
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++++I ++ HG A+ F M+ + +PN VT +GVL+ACSH+GL
Sbjct: 720 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 779
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG+SP +HY C+VD+L RAG L A + +++MP++P+ VW LL AC +H+N EI
Sbjct: 780 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 839
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ AA+HL ELEP+ Y++LSN+YA + WD R+ +K G+KK PG SW+E +
Sbjct: 840 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV-K 898
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
IH F GD HP + EI + DL R GY + S+L ++ E+K I+ HSE
Sbjct: 899 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSE 958
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA++FGLL+ + +MKNLR+C DCH ++ S+V REI+VRD RFHHF+ G C
Sbjct: 959 KLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGAC 1018
Query: 543 SCGNYW 548
SC +YW
Sbjct: 1019 SCKDYW 1024
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 46/360 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + + +N LW ++ Y L L++S ++ M+ E I P +T ++ K C + D+
Sbjct: 407 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 466
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+QIH+Q I+ F + YV + +I MY K G L +W ++++
Sbjct: 467 ELGEQIHSQ-IIKTNFQLNAYVCSVLIDMYAKLGKLD--------------TAW-DILIR 510
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+A KD V+WT M+ GY Q +A+ F +M G+ +D V L
Sbjct: 511 FAG----------------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 554
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+SACA L +K + A SGF +++ +AL+ +YS+CG I+++Y F
Sbjct: 555 TNAVSACAGLQALKEGQQIHAQACVSGFS--SDLPFQNALVTLYSRCGKIEESYLAFEQT 612
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------- 299
+ + ++++++ GF G A+++F M + N TF + A S
Sbjct: 613 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 672
Query: 300 --HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
H + G T+ ++ + + G + +A K ++ + N W A++ A H
Sbjct: 673 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 731
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 34/299 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ ++ K+ W A+I G ++I L+C M GI P + S++ AC
Sbjct: 200 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 259
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ + +G+Q+H + L GF+SD YV N ++ +Y G L + +F M +RD V++
Sbjct: 260 KIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 318
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI G Q +A+E F+RM G+E
Sbjct: 319 TLI-------------------------------NGLSQCGYGEKAMELFKRMHLDGLEP 347
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D TL ++ AC+ G + + GF NN + G AL+++Y+KC I+ A
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS-NNKIEG-ALLNLYAKCADIETALD 405
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F+ + NV ++ M++ + + + ++F M E PN T+ +L C +G
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 464
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 61/386 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC---TE 64
VF+++ + F W +I+ + + + L+ M E + P T S + +AC +
Sbjct: 102 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 161
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
DV +QIHA+ IL G V N +I +Y + GF+ +R+V
Sbjct: 162 AFDVV--EQIHAR-ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV-------------- 204
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F+ L LKD +W AM++G +N EAI F M G+
Sbjct: 205 -----------------FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 247
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+SAC ++ ++ + + GF ++ V +AL+ +Y G++ A I
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS--SDTYVCNALVSLYFHLGNLISAEHI 305
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F M QR+ +Y+++I G + G A++LF M +P+ T ++ ACS G
Sbjct: 306 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 365
Query: 303 -----LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-- 351
L Y G + + +++L + +E AL + VE N +W +L
Sbjct: 366 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 424
Query: 352 --------GACQIHRNPEIAQIAANH 369
+ +I R +I +I N
Sbjct: 425 YGLLDDLRNSFRIFRQMQIEEIVPNQ 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 32/195 (16%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L FEQ + + W AL+ G+ G+ ++++ ++ M REGI +FT + KA +E
Sbjct: 607 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 666
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+Q+HA I G+ S+ V N +I MY KCG + + K F E+ ++ VSW +I
Sbjct: 667 NMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 725
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY+ +G EA++ F++M ++ V ++V
Sbjct: 726 NAYSKHG-------------------------------FGSEALDSFDQMIHSNVRPNHV 754
Query: 187 TLVGVISACAQLGVI 201
TLVGV+SAC+ +G++
Sbjct: 755 TLVGVLSACSHIGLV 769
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 149/351 (42%), Gaps = 52/351 (14%)
Query: 42 SMRREGIGPVSFTLSALFKACTEVL-DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
S+ GI P TL L + C + + G+++H+Q + LG ++
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN-------------- 79
Query: 101 CGFLGC-SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTG 159
GC S K+FD Y GD+ A +F+E+P + W M+
Sbjct: 80 ----GCLSEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 120
Query: 160 YVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF-GP 218
E F RM V + T GV+ AC + G + + + V +I + G
Sbjct: 121 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAF-DVVEQIHARILYQGL 178
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
++ VV + LID+YS+ G +D A R+F G++ ++ S+ +MI G + + AI+LF D
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238
Query: 279 MVKTETKPNGVTFIGVLTACS-----HVGLKCYG----VSPSTDHYAC--MVDLLGRAGC 327
M P F VL+AC +G + +G + S+D Y C +V L G
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 298
Query: 328 LEEALKMVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAAN-HLFELEPD 376
L A + M + + + L+ G Q + ++ HL LEPD
Sbjct: 299 LISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 291/546 (53%), Gaps = 47/546 (8%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
K+ WT +I GY +++ + M GI L+ AC + + GQQI
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ + GF+SDL N ++ +Y KCG +
Sbjct: 597 HAQACV-SGFSSDLPFQNALVTLYSKCG-------------------------------N 624
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+E A F + D +AW A+V+G+ Q+ EA+ F RM G++++ T + A
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
++ +K V + +G+ + V +A+I MY+KCGSI DA + F+ + +N
Sbjct: 685 ASETANMKQGKQVHAVITKTGYD--SETEVCNAIISMYAKCGSISDAKKQFLELSMKNEV 742
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S+++MI ++ HG A+ F M+ + +PN VT +GVL+ACSH+GL
Sbjct: 743 SWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESM 802
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
YG++P +HY C+VD+L RAG L A + +MP+EP+ VW LL AC +H+N EI
Sbjct: 803 NTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEI 862
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
+ AA+HL ELEP+ Y++LSN+YA WD R+ +K G+KK PG SW+E +
Sbjct: 863 GEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEV-K 921
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
IH F GD HP + EI + DL R GY + S+L ++ E+K + HSE
Sbjct: 922 NSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSE 981
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA++FGLL+ + +MKNLR+C DCH ++ S+V REI+VRD RFHHF+ G C
Sbjct: 982 KLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGAC 1041
Query: 543 SCGNYW 548
SC +YW
Sbjct: 1042 SCKDYW 1047
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 46/360 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F + + +N LW ++ Y L L++S ++ M+ E I P +T ++ K C + D+
Sbjct: 430 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 489
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
LG+QIH+Q I+ F + YV + +I MY K G L +W ++++
Sbjct: 490 ELGEQIHSQ-IIKTSFQLNAYVCSVLIDMYAKLGKLD--------------TAW-DILIR 533
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+A KD V+WT M+ GY Q +A+ F +M G+ +D V L
Sbjct: 534 FAG----------------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 577
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+SACA L +K + A SGF +++ +AL+ +YSKCG+I++AY F
Sbjct: 578 TNAVSACAGLQALKEGQQIHAQACVSGFS--SDLPFQNALVTLYSKCGNIEEAYLAFEQT 635
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--------- 299
+ + ++++++ GF G A+++F M + N TF + A S
Sbjct: 636 EAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGK 695
Query: 300 --HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
H + G T+ ++ + + G + +A K ++ ++ N W A++ A H
Sbjct: 696 QVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK-NEVSWNAMINAYSKH 754
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 45/337 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + K+ W A+I G ++I L+C M GI P + S++ AC ++
Sbjct: 225 RRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 284
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G+Q+H + L GF+SD YV N ++ +Y G L + +F M +RD V++ L
Sbjct: 285 ESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTL 343
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I G Q +A+E F+RMQ G+E D
Sbjct: 344 I-------------------------------NGLSQCGYGEKAMELFKRMQLDGLEPDS 372
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL ++ AC+ G + + GF +N + AL+++Y+KC I+ A F
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFA--SNDKIEGALLNLYAKCSDIETALNYF 430
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
+ + NV ++ M++ + + + ++F M E PN T+ +L C +G
Sbjct: 431 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490
Query: 303 ------LKCYGVSPSTDHYAC--MVDLLGRAGCLEEA 331
+ S + Y C ++D+ + G L+ A
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTA 527
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 35/243 (14%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
L FEQ + + W AL+ G+ G+ ++++ ++ M REGI +FT + KA +E
Sbjct: 630 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETA 689
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+Q+HA I G+ S+ V N +I MY KCG + ++K F E+ ++ VSW +I
Sbjct: 690 NMKQGKQVHA-VITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMI 748
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY+ +G EA++ F++M ++ V ++V
Sbjct: 749 NAYSKHG-------------------------------FGSEALDSFDQMIHSNVRPNHV 777
Query: 187 TLVGVISACAQLGVI-KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLVGV+SAC+ +G++ K + + G P V ++DM ++ G + A
Sbjct: 778 TLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYV--CVVDMLTRAGLLSRAKDFI 835
Query: 246 VGM 248
+ M
Sbjct: 836 LEM 838
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 160/386 (41%), Gaps = 61/386 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC---TE 64
VF+++ + F W +I+ + L+ M E + P T S + +AC +
Sbjct: 125 VFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV 184
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
DV +QIHA+ I+ G V N +I +Y + GF+ +R+V
Sbjct: 185 AFDVV--EQIHAR-IIYQGLGKSTIVCNPLIDLYSRNGFVDRARRV-------------- 227
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F+ L LKD +W AM++G +N EAI F M G+
Sbjct: 228 -----------------FDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPT 270
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
V+SAC ++ ++ + + GF ++ V +AL+ +Y GS+ A I
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS--SDTYVCNALVSLYFHLGSLISAEHI 328
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F M QR+ +Y+++I G + G A++LF M +P+ T ++ ACS G
Sbjct: 329 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTL 388
Query: 303 -----LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-- 351
L Y G + + +++L + +E AL + VE N +W +L
Sbjct: 389 FSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVE-NVVLWNVMLVA 447
Query: 352 --------GACQIHRNPEIAQIAANH 369
+ +I R +I +I N
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQ 473
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 135/313 (43%), Gaps = 53/313 (16%)
Query: 42 SMRREGIGPVSFTLSALFKACTEVL-DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK 100
S+ GI P TL L + C + + G+++H+Q + LG F ++ + ++ Y+
Sbjct: 57 SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG-FDNNACLSEKLLDFYLF 115
Query: 101 CGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGY 160
G L + KVFDEMPER + +W ++I A+ LF MV
Sbjct: 116 KGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGR-----------MVN-- 162
Query: 161 VQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC----AQLGVIKYANWVCEIAEGSGF 216
+N P E T GV+ AC V++ + I +G G
Sbjct: 163 -ENVTPNEG-----------------TFSGVLEACRGGSVAFDVVEQIHARI-IYQGLG- 202
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
+ +V + LID+YS+ G +D A R+F G+ ++ S+ +MI G + + AI+LF
Sbjct: 203 ---KSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259
Query: 277 GDMVKTETKPNGVTFIGVLTACS-----HVGLKCYG----VSPSTDHYAC--MVDLLGRA 325
DM P F VL+AC +G + +G + S+D Y C +V L
Sbjct: 260 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 319
Query: 326 GCLEEALKMVEKM 338
G L A + M
Sbjct: 320 GSLISAEHIFSNM 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
G NN + L+D Y G +D A ++F M +R +F+++ MI A + L
Sbjct: 97 LGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCL 156
Query: 276 FGDMVKTETKPNGVTFIGVLTACS------------HVGLKCYGVSPSTDHYACMVDLLG 323
FG MV PN TF GVL AC H + G+ ST ++DL
Sbjct: 157 FGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYS 216
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLG 352
R G ++ A ++ + + ++ + W A++
Sbjct: 217 RNGFVDRARRVFDGLYLKDHSS-WVAMIS 244
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/509 (41%), Positives = 294/509 (57%), Gaps = 40/509 (7%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + +LS KA D Q+HA + LG +D+ + T++ Y KCG L +RK
Sbjct: 102 PDALSLSFALKASARCSDAHTTVQLHALVLRLG-VAADVRLLTTLLDSYAKCGDLASARK 160
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFDEM RDV +W L+ A + A LF+ L Q RE
Sbjct: 161 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL------------ANSFQELPSRE- 207
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
E + VT+V +SACAQ+G++K +V E A+ FG NV V ++LI
Sbjct: 208 ------------EPNEVTIVAALSACAQIGLLKDGMYVHEFAK--RFGLDRNVRVCNSLI 253
Query: 230 DMYSKCGSIDDAYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
DMYSKCGS+ A +F +K R + SY++ I +MHG A++LF +M T +P+
Sbjct: 254 DMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEPD 312
Query: 288 GVTFIGVLTACSHVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
GVT++ VL C+H GL G V+P+ HY +VDLLGRAG L EA V MP
Sbjct: 313 GVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMP 372
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
+ +W LLGA ++H E+A++AAN L EL + G+Y++LSN+YAS W DV R
Sbjct: 373 FPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGR 432
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR ++ ++K PG+S+ E D GV+H+F GD HP EI +AL D++ R+ GY+P
Sbjct: 433 VRDTMRSNDVRKVPGFSYTEID-GVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEP 491
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+R++KNLRIC DCH+ S
Sbjct: 492 ETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLIS 551
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ GR IV+RD RFH F+DG+CSC +YW
Sbjct: 552 KAYGRVIVIRDRARFHRFEDGQCSCRDYW 580
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 312/554 (56%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ ++ WTA+I Y ++ L+ M+ EG T ++ A ++ D
Sbjct: 189 VFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD 248
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +H +L GF D+ VGN+++GMY KCG
Sbjct: 249 GRMAISVHGYAVL-NGFIGDVSVGNSIVGMYAKCG------------------------- 282
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
++E A +F+ + ++ ++W +M++GY QN +P +A+ F +MQ + + + VT
Sbjct: 283 ------NVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVT 336
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-- 245
+ ++SAC+ LG + S + + +A++DMY KCG +D A +F
Sbjct: 337 ALIMVSACSYLGSKHLGRKLHNFVISSKMDI--DTTLRNAIMDMYMKCGDLDTAVEMFNN 394
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ +R+V S++ +I G+ +HG A++LF M +PN +TF +L+ACSH GL
Sbjct: 395 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 454
Query: 304 ---KCYG------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
KC+ V P HYACMVD+LGRAG L EA ++++K+P P+ VWGALL AC
Sbjct: 455 EGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 514
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH N E+ +IAAN+LF+LEP+ G Y+++SNIYA++ W +V VR+ +K GLKK
Sbjct: 515 RIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAA 574
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
+S +E V H F D + P E+ + + L ++ GY P+L VL+DV E+K+
Sbjct: 575 FSVIEFGTEV-HGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKE 633
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSEKLA+AFG++ G +++ KNLR+C DCH S + GR+I+VRD RF
Sbjct: 634 HLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRF 693
Query: 535 HHFQDGKCSCGNYW 548
HHFQ G+CSCG+YW
Sbjct: 694 HHFQGGRCSCGDYW 707
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 200/412 (48%), Gaps = 51/412 (12%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N FL ++R Y G ++I LY M+R G+G +FT + K C L G+ +H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
Q ++ GF SDL+V ++ MY KCG +G + +V
Sbjct: 156 GQ-VVRTGFGSDLFVEAALVDMYAKCGEIGDAHEV------------------------- 189
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
F+ + ++D V WTAM+T Y Q +P +A+ F +MQ G D +T + V SA
Sbjct: 190 ------FDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
QLG + A V A +GF I +V VG++++ MY+KCG+++ A +F M++RN S
Sbjct: 244 GQLGDGRMAISVHGYAVLNGF--IGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGIS 301
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG-------- 307
++SM+ G+ +GR A+ LF M +E PN VT + +++ACS++G K G
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361
Query: 308 ---VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV-EPNGGVWGALLGACQIH-RNPEI 362
+ T ++D+ + G L+ A++M + E + W L+ +H E
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421
Query: 363 AQIAANHLFE-LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
++ + E +EP+ I ILS + AG+ D+ + MT L P
Sbjct: 422 LELFSRMQVEGVEPNDITFTSILSAC-SHAGLIDEGRKC--FADMTKLSVRP 470
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF++++ +N W +++ GY G D++SL+ M+ P T + AC+ +
Sbjct: 288 RLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYL 347
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVVSWT 123
LG+++H ++ D + N ++ MY+KCG L + ++F+ E+ ERDV SW
Sbjct: 348 GSKHLGRKLH-NFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWN 406
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LI +GY + +EA+E F RMQ GVE
Sbjct: 407 VLI-------------------------------SGYGVHGHGKEALELFSRMQVEGVEP 435
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ +T ++SAC+ G+I A+ + + + ++DM + G +++A+R
Sbjct: 436 NDITFTSILSACSHAGLIDEGRKC--FADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFR 493
Query: 244 IFVGMKQRNVFS-YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ + R + +++L +HG ++ + E + G
Sbjct: 494 LIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 539
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 30/287 (10%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTA--------MVTGYVQNAKPREAIEYFE 174
LI+ Y+ GD+ SA LF+ A M+ Y + EAI+ +
Sbjct: 62 ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121
Query: 175 RMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
MQ GV + T V+ CA +LG + + V +GFG +++ V +AL+DMY+
Sbjct: 122 YMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVRTGFG--SDLFVEAALVDMYA 178
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG I DA+ +F M R+V +++MI + R A+ LF M + + +T I
Sbjct: 179 KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAIS 238
Query: 294 VLTACSHVGLKCYGVSPSTDHYACM-------------VDLLGRAGCLEEALKMVEKMPV 340
V +A +G + S YA + V + + G +E A + ++M
Sbjct: 239 VASAVGQLGDGRMAI--SVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME- 295
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHL--FELEPDKIGNYIILS 385
E NG W ++L + P A N + E +P+ + I++S
Sbjct: 296 ERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVS 342
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 296/542 (54%), Gaps = 48/542 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ +I Y G K+S L+ ++ F + L T L++ +G+QIH Q I
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+G + V N ++ MY KC NGD E A
Sbjct: 370 TVGA-NFESRVENALVDMYAKC------------------------------NGDKE-AQ 397
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+ + K V WTAM++ YVQ K E I F M+ GV D T ++ ACA L
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + + SGF ++NV GSAL+D Y+KCG + DA + F M +RN S++++
Sbjct: 458 SISLGRQLHSLLIRSGF--MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I +A +G + F M+++ KP+ V+F+ VL+ACSH G + Y
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
V+P +HY MVD+L R G +EA K++ +MP EP+ +W ++L +C+IH+N E+A+ AA
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635
Query: 368 NHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
+ LF +E + YI +SNIYA AG WD+V++V++ ++ G++K P YSW+E + H
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEI-KHQTH 694
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F A D +HP +I + + L ++ GY+P+ L+DV + K L HSE+ A+
Sbjct: 695 VFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAI 754
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AF L+ T G+ + +MKNLR C DCH + SQ++ REI+VRD+ RFHHF+DG CSCG+
Sbjct: 755 AFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGD 814
Query: 547 YW 548
YW
Sbjct: 815 YW 816
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 54/361 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + K+ + +L+ GY +G +++I L+ + GI P FT +AL A + D
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQ+H +L F +++VGN ++ Y K
Sbjct: 257 TKFGQQVHG-FVLKTNFVWNVFVGNALLDYYSK--------------------------- 288
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET---D 184
+ ++ G LF E+P D +++ ++T Y N + +E+ + F ++Q+ +
Sbjct: 289 ----HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344
Query: 185 YVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL+ + ++ L + + + C+ I G+ F V +AL+DMY+KC +A +
Sbjct: 345 FATLLSIATSSLNLRMGRQIH--CQAITVGANFES----RVENALVDMYAKCNGDKEAQK 398
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
IF + ++ +++MI + G+ I +F DM +T + TF +L AC+
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H L G + + ++D + GC+ +A+K +MP E N W AL+
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALIS 517
Query: 353 A 353
A
Sbjct: 518 A 518
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 41/251 (16%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
D + +F+ + K+ WTA+I Y+ +G ++ I+++ MRR G+ T +++ +A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + +SLG+Q+H+ ++ GF S++Y G+ ++ Y KCG + + K F EMPER+ VS
Sbjct: 453 CANLASISLGRQLHS-LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W LI AYA NG+++ G N F++M +G
Sbjct: 512 WNALISAYAQNGNVD---GTLNS----------------------------FQQMIQSGY 540
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGS 237
+ D V+ + V+SAC+ G ++ A W + I V ++++D+ + G
Sbjct: 541 KPDSVSFLSVLSACSHCGFVEEALW-----HFNSMTQIYEVTPKREHYTSMVDVLCRNGR 595
Query: 238 IDDAYRIFVGM 248
D+A ++ M
Sbjct: 596 FDEAEKLMTEM 606
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 138/273 (50%), Gaps = 15/273 (5%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF + N + +++ G L + +VFD+MP ++ +S +I + G + A
Sbjct: 34 IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ + + V+WT ++ GY+Q+ + +EA + M+ G+E DYVTLV ++S
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG---F 150
Query: 199 GVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
G ++ N + +I G N++V ++L+D Y K + A ++F M ++ +++
Sbjct: 151 GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFN 210
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----SHVGLKCYGVSPST 312
S++ G++ G AI+LF ++ + KP+ TF +L+A + G + +G T
Sbjct: 211 SLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKT 270
Query: 313 DHY------ACMVDLLGRAGCLEEALKMVEKMP 339
+ ++D + ++E K+ +MP
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMP 303
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 50/364 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F+ + + WT LI GY+ K++ LY MRR GI P TL L
Sbjct: 91 SKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGF 150
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK--CGFLGCSRKVFDEMPERDVV 120
E+ ++ QIH I LG + +L V N+++ Y K C +L
Sbjct: 151 GELETKNVIVQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYL---------------- 193
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
A LF + KD V + +++TGY EAIE F + +G
Sbjct: 194 -----------------ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ T ++SA L K+ V + F + NV VG+AL+D YSK +D+
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF--VWNVFVGNALLDYYSKHDQVDE 294
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT-ACS 299
++F M + + SY+ +I +A +G+ + LF + T F +L+ A S
Sbjct: 295 VGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354
Query: 300 HVGLK------CYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L+ C ++ + + +VD+ + +EA K+ + + + W A
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTA 413
Query: 350 LLGA 353
++ A
Sbjct: 414 MISA 417
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 314/567 (55%), Gaps = 55/567 (9%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D R+ + ++ W ++I Y ++ L+ M R G+ FTL+++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF-LGCSRKVFDEMPERDV 119
A T + D+S G Q H Q I G F + +VG+ +I +Y KCG + RKVF+E+ E D+
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE-AIEYFERMQY 178
V W MV+GY QN + E A+E F +MQ
Sbjct: 308 V-------------------------------LWNTMVSGYSQNEEFLEDALECFRQMQG 336
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G + + V VISAC+ L + +A S P N + V +ALI MYSKCG++
Sbjct: 337 IGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI-PSNRISVDNALIAMYSKCGNL 395
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA R+F M + N S +SMI G+A HG ++ LF M++ + P +TFI VL+AC
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSAC 455
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
+H G + + + P +HY+CM+DLLGRAG L EA ++ +MP P
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W +LLGAC+ H N E+A AAN + +LEP Y++LSN+YASAG W++V+ VR+ ++
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK PG SW+E + IH F A D +HP EI + L ++ +++ GY P++R L
Sbjct: 576 RGVKKKPGCSWIEVKKR-IHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL- 633
Query: 467 DVSDE-----EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
V D+ EK+ L HSEKLA+AFGL++T G V ++KNLRIC DCH + S +
Sbjct: 634 -VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAI 692
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
GREI VRD RFH F++G+CSCG+YW
Sbjct: 693 AGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 26/322 (8%)
Query: 48 IGPVSFTLSA---LFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGF 103
+ +S+TL L K C D+S G+ +H ++ + F Y N I +Y KCG
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLH--SLYIKSFIPPSTYFSNHFILLYSKCGR 58
Query: 104 LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
L +RK F ++ + +V S+ +I AYA A LF+++P D V++ +++ Y
Sbjct: 59 LAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC 118
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNV 222
+ A+ F M+ G++ D TL VI+AC +G+I + +A SGF + V
Sbjct: 119 GETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLH---SVAVSSGFD--SYV 173
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V +AL+ Y K G +DDA R+F GM R+ S++SMI+ + H A+ LF +MV+
Sbjct: 174 SVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR 233
Query: 282 TETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY------ACMVDLLGR-AGCLE 329
+ T VLTA + + GL+ +G T + + ++DL + G +
Sbjct: 234 RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS 293
Query: 330 EALKMVEKMPVEPNGGVWGALL 351
+ K+ E++ EP+ +W ++
Sbjct: 294 DCRKVFEEI-TEPDLVLWNTMV 314
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 59/350 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ + + LI Y G ++ L+ MR G+ FTLSA+ AC + D
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD--D 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELI 126
V L Q+H+ + GF S + V N ++ Y K G L +++VF M RD VSW +I
Sbjct: 154 VGLIGQLHSVAV-SSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
VAY + + A GLF E+ + G+ D
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRR-------------------------------GLNVDMF 241
Query: 187 TLVGVISACAQL----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSIDDA 241
TL V++A L G +++ + + +GF N VGS LID+YSKC G + D
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIK----TGFH--QNSHVGSGLIDLYSKCGGGMSDC 295
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGR-AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F + + ++ +++M+ G++ + A++ F M +PN +F+ V++ACS+
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355
Query: 301 V-----GLKCYGVSPSTDHYA-------CMVDLLGRAGCLEEALKMVEKM 338
+ G + + ++ +D + ++ + + G L++A ++ ++M
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 316/560 (56%), Gaps = 50/560 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F V + FL+ +LI+ G D++ Y M I P ++T +++ KAC
Sbjct: 59 AYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKAC 118
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + LG +H+ + + G+ S+ +V ++ Y K +RKVFD
Sbjct: 119 ADLSLLRLGTIVHSH-VFVSGYASNSFVQAALVTFYAKSCTPRVARKVFD---------- 167
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
E+P + +AW +M++GY QN EA+E F +M+ +G E
Sbjct: 168 ---------------------EMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGE 206
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T V V+SAC+QLG + W+ E G+G NVV+ ++L++M+S+CG + A
Sbjct: 207 PDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRM--NVVLATSLVNMFSRCGDVGRAR 264
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+F M + NV S+++MI G+ MHG A+++F M PN VT++ VL+AC+H G
Sbjct: 265 AVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAG 324
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEP-NGGVWGA 349
L + YGV P +H+ CMVD+ GR G L EA + V + E VW A
Sbjct: 325 LINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTA 384
Query: 350 LLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+LGAC++H+N ++ A +L EP+ G+Y++LSN+YA AG D V VR ++ GL
Sbjct: 385 MLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGL 444
Query: 410 KKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
KK GYS ++ +R + F GD +HP + EI L +L+ R + GY P S ++++
Sbjct: 445 KKQVGYSTIDVENRSYL--FSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHEL 502
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+EE++ L HSEKLA+AFGL+ T G T+RI+KNLRICEDCH + S V+ REI+V
Sbjct: 503 EEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIV 562
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFHHF++G CSC +YW
Sbjct: 563 RDKLRFHHFREGSCSCSDYW 582
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ G + LF + D + +++ +A+ ++ RM ++ +
Sbjct: 46 TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIV 105
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T VI ACA L +++ V SG+ +N V +AL+ Y+K + A
Sbjct: 106 PSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYA--SNSFVQAALVTFYAKSCTPRVAR 163
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M QR++ +++SMI G+ +G A A+++F M ++ +P+ TF+ VL+ACS +G
Sbjct: 164 KVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLG 223
Query: 303 ---LKCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L C+ G+ + +V++ R G + A + + M E N W A++
Sbjct: 224 SLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMN-EGNVVSWTAMI 282
Query: 352 GACQIH 357
+H
Sbjct: 283 SGYGMH 288
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 314/567 (55%), Gaps = 55/567 (9%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D R+ + ++ W ++I Y ++ L+ M R G+ FTL+++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF-LGCSRKVFDEMPERDV 119
A T + D+S G Q H Q I G F + +VG+ +I +Y KCG + RKVF+E+ E D+
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE-AIEYFERMQY 178
V W MV+GY QN + E A+E F +MQ
Sbjct: 308 V-------------------------------LWNTMVSGYSQNEEFLEDALECFRQMQG 336
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G + + V VISAC+ L + +A S P N + V +ALI MYSKCG++
Sbjct: 337 IGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI-PSNRISVDNALIAMYSKCGNL 395
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA R+F M + N S +SMI G+A HG ++ LF M++ + P +TFI VL+AC
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSAC 455
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
+H G + + + P +HY+CM+DLLGRAG L EA ++ +MP P
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W +LLGAC+ H N E+A AAN + +LEP Y++LSN+YASAG W++V+ VR+ ++
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK PG SW+E + IH F A D +HP EI + L ++ +++ GY P++R L
Sbjct: 576 RGVKKKPGCSWIEVKK-RIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL- 633
Query: 467 DVSDE-----EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
V D+ EK+ L HSEKLA+AFGL++T G V ++KNLRIC DCH + S +
Sbjct: 634 -VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAI 692
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
GREI VRD RFH F++G+CSCG+YW
Sbjct: 693 AGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 26/322 (8%)
Query: 48 IGPVSFTLSA---LFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGF 103
+ +S+TL L K C D+S G+ +H ++ + F Y N I +Y KCG
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLH--SLYIKSFIPPSTYFSNHFILLYSKCGR 58
Query: 104 LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN 163
L +RK F ++ + +V S+ +I AYA A LF+++P D V++ +++ Y
Sbjct: 59 LAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC 118
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNV 222
+ A+ F M+ G++ D TL VI+AC +G+I + +A SGF + V
Sbjct: 119 GETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLH---SVAVSSGFD--SYV 173
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V +AL+ Y K G +DDA R+F GM R+ S++SMI+ + H A+ LF +MV+
Sbjct: 174 SVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR 233
Query: 282 TETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHY------ACMVDLLGR-AGCLE 329
+ T VLTA + + GL+ +G T + + ++DL + G +
Sbjct: 234 RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS 293
Query: 330 EALKMVEKMPVEPNGGVWGALL 351
+ K+ E++ EP+ +W ++
Sbjct: 294 DCRKVFEEI-TEPDLVLWNTMV 314
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 59/350 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ + + LI Y G ++ L+ MR G+ FTLSA+ AC + D
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD--D 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELI 126
V L Q+H+ + GF S + V N ++ Y K G L +++VF M RD VSW +I
Sbjct: 154 VGLIGQLHSVAV-SSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
VAY + + A GLF E+ + G+ D
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRR-------------------------------GLNVDMF 241
Query: 187 TLVGVISACAQL----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSIDDA 241
TL V++A L G +++ + + +GF N VGS LID+YSKC G + D
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIK----TGFH--QNSHVGSGLIDLYSKCGGGMSDC 295
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGR-AHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F + + ++ +++M+ G++ + A++ F M +PN +F+ V++ACS+
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355
Query: 301 V-----GLKCYGVSPSTDHYA-------CMVDLLGRAGCLEEALKMVEKM 338
+ G + + ++ +D + ++ + + G L++A ++ ++M
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 296/542 (54%), Gaps = 48/542 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
+ +I Y G K+S L+ ++ F + L T L++ +G+QIH Q I
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+G + V N ++ MY KC NGD E A
Sbjct: 370 TVGA-NFESRVENALVDMYAKC------------------------------NGDKE-AQ 397
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+ + K V WTAM++ YVQ K E I F M+ GV D T ++ ACA L
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
I + + SGF ++NV GSAL+D Y+KCG + DA + F M +RN S++++
Sbjct: 458 SISLGRQLHSLLIRSGF--MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYG 307
I +A +G + F M+++ KP+ V+F+ VL+ACSH G + Y
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAA 367
V+P +HY MVD+L R G +EA K++ +MP EP+ +W ++L +C+IH+N E+A+ AA
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635
Query: 368 NHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
+ LF +E + YI +SNIYA AG WD+V++V++ ++ G++K P YSW+E + H
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEI-KHQTH 694
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F A D +HP +I + + L ++ GY+P+ L+DV + K L HSE+ A+
Sbjct: 695 VFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAI 754
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
AF L+ T G+ + +MKNLR C DCH + SQ++ REI+VRD+ RFHHF+DG CSCG+
Sbjct: 755 AFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGD 814
Query: 547 YW 548
YW
Sbjct: 815 YW 816
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 54/361 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + K+ + +L+ GY +G +++I L+ + GI P FT +AL A + D
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
GQQ+H +L F +++VGN ++ Y K
Sbjct: 257 TKFGQQVHG-FVLKTNFVWNVFVGNALLDYYSK--------------------------- 288
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET---D 184
+ ++ G LF E+P D +++ ++T Y N + +E+ + F ++Q+ +
Sbjct: 289 ----HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344
Query: 185 YVTLVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL+ + ++ L + + + C+ I G+ F V +AL+DMY+KC +A +
Sbjct: 345 FATLLSIATSSLNLRMGRQIH--CQAITVGANFES----RVENALVDMYAKCNGDKEAQK 398
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
IF + ++ +++MI + G+ I +F DM +T + TF +L AC+
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H L G + + ++D + GC+ +A+K +MP E N W AL+
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALIS 517
Query: 353 A 353
A
Sbjct: 518 A 518
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 41/251 (16%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
D + +F+ + K+ WTA+I Y+ +G ++ I+++ MRR G+ T +++ +A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C + +SLG+Q+H+ ++ GF S++Y G+ ++ Y KCG + + K F EMPER+ VS
Sbjct: 453 CANLASISLGRQLHS-LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W LI AYA NG+++ G N F++M +G
Sbjct: 512 WNALISAYAQNGNVD---GTLNS----------------------------FQQMIQSGY 540
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG----SALIDMYSKCGS 237
+ D V+ + V+SAC+ G ++ A W + I V ++++D+ + G
Sbjct: 541 KPDSVSFLSVLSACSHCGFVEEALW-----HFNSMTQIYEVTPKREHYTSMVDVLCRNGR 595
Query: 238 IDDAYRIFVGM 248
D+A ++ M
Sbjct: 596 FDEAEKLMTEM 606
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 138/273 (50%), Gaps = 15/273 (5%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF + N + +++ G L + +VFD+MP ++ +S +I + G + A
Sbjct: 34 IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF+ + + V+WT ++ GY+Q+ + +EA + M+ G+E DYVTLV ++S
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG---F 150
Query: 199 GVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
G ++ N + +I G N++V ++L+D Y K + A ++F M ++ +++
Sbjct: 151 GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFN 210
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-----SHVGLKCYGVSPST 312
S++ G++ G AI+LF ++ + KP+ TF +L+A + G + +G T
Sbjct: 211 SLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKT 270
Query: 313 DHY------ACMVDLLGRAGCLEEALKMVEKMP 339
+ ++D + ++E K+ +MP
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMP 303
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 50/364 (13%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F+ + + WT LI GY+ K++ LY MRR GI P TL L
Sbjct: 91 SKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGF 150
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVK--CGFLGCSRKVFDEMPERDVV 120
E+ ++ QIH I LG + +L V N+++ Y K C +L
Sbjct: 151 GELETKNVIVQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYL---------------- 193
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
A LF + KD V + +++TGY EAIE F + +G
Sbjct: 194 -----------------ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ T ++SA L K+ V + F + NV VG+AL+D YSK +D+
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF--VWNVFVGNALLDYYSKHDQVDE 294
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT-ACS 299
++F M + + SY+ +I +A +G+ + LF + T F +L+ A S
Sbjct: 295 VGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354
Query: 300 HVGLK------CYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ L+ C ++ + + +VD+ + +EA K+ + + + W A
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTA 413
Query: 350 LLGA 353
++ A
Sbjct: 414 MISA 417
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/473 (39%), Positives = 286/473 (60%), Gaps = 15/473 (3%)
Query: 90 VGNTMIGMYVKCGFLGCSRKV-FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
V N+++ +Y G L +R+V + DVVSW ++ Y GD+ +A +F +P +
Sbjct: 115 VTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPER 174
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ V+W+AMV V+ + EA+ F+RM D V LV V+ ACA LG ++ WV
Sbjct: 175 NLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVH 234
Query: 209 EIAEGSGFG-PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHG 267
E FG N+++ +AL+DMY KCG ++DA+++F G+ +R+V +++MI G AM+G
Sbjct: 235 RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG 294
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYA 316
A++LF M++ PN TFI VL AC+H G ++ YG+ P +HY
Sbjct: 295 YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYG 354
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
C+ DLLGRAG +EEA ++ MP+EP+ WGAL+ +CQ+H + + + L ELEP
Sbjct: 355 CLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPY 414
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHP 436
G Y++L N+YA G W++ +R++++ G KK G S++E + G++HEF +GD HP
Sbjct: 415 DGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELN-GLVHEFISGDTRHP 473
Query: 437 NSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMT-HSEKLALAFGLLTTSP 495
+ +I L D+ RLQ GY + V+ D+ DEE K I ++ HSE+LALAFG+L
Sbjct: 474 LTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQ 533
Query: 496 GATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
G +RI+KNLR+C DCH+ S++ REI+VRD RFH F+DG CSC +YW
Sbjct: 534 GVPIRIVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V ++ LW A+I G + G+ + ++ L+ M ++G P T A+ ACT
Sbjct: 271 VFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGR 330
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G+++ G + G + + + G + + + +MP E W L+
Sbjct: 331 VDEGKRVFKSMQDYGIKPQREHYG-CLADLLGRAGNVEEAEALLLDMPMEPHASQWGALM 389
Query: 127 VAYANNGDM---ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ + D+ E G EL D + + Y N + EA + M+ G +
Sbjct: 390 SSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKK 449
Query: 184 D----YVTLVGVI 192
+ ++ L G++
Sbjct: 450 ETGLSFIELNGLV 462
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 314/557 (56%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTE 64
RL E N FLW LIR Y G + +I LY M G + P +FT + KAC
Sbjct: 119 RLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAA 178
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+LD+ G+++H + ++ + +D++V +I MY KC GC
Sbjct: 179 LLDLGAGREVHDR-VMRTSWAADVFVCAGLIDMYAKC---GC------------------ 216
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ A +F+ ++D V W +M+ QN +P EA+ M G+
Sbjct: 217 ----------VDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPT 266
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTLV ISA A G + + GFG + + ++L+DMY+K G + A +
Sbjct: 267 IVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKL--KTSLLDMYAKSGWVTVARVL 324
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGL 303
F + R + S+++MI GF MHG A A +LF M + + P+ +TF+GVL+AC+H G+
Sbjct: 325 FDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGM 384
Query: 304 ------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
Y + P HY C+VD+LG +G +EA +++ M V+P+ G+WGALL
Sbjct: 385 VQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALL 444
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
C+IH+N E+A++A + L ELEP+ GNY++LSNIYA +G W++ +RVR+L+ GLKK
Sbjct: 445 NGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKK 504
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
SW+E +G H F GD +HP S EI + L L + GY P+ SV ++V D+
Sbjct: 505 IIACSWIEL-KGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDD 563
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK+ ++ HSE+LA+AFGL++T PG + + KNLR+CEDCH+ + SQ+ REI++RD
Sbjct: 564 EKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDV 623
Query: 532 MRFHHFQDGKCSCGNYW 548
R+HHF +G+CSC ++W
Sbjct: 624 NRYHHFVNGECSCKDHW 640
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
+ + ++C V G+Q+HA+ +L+ G D + ++ +Y CG + +R+
Sbjct: 67 ATILRSCVLSRAVRPGRQLHAR-LLVSGLGLDAVLATRLVDLYASCGLVSVARR------ 119
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV-AWTAMVTGYVQNAKPREAIEYFE 174
LF+E+P + V W ++ Y ++ AIE +
Sbjct: 120 -------------------------LFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYR 154
Query: 175 RMQYAG-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M G +E D T V+ ACA L + V + + + +V V + LIDMY+
Sbjct: 155 EMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAA--DVFVCAGLIDMYA 212
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
KCG +D+A+ +F R+ ++SMI +GR A+ L +M P VT +
Sbjct: 213 KCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLV 271
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM-KQRNVFSYSSMILGFAMHGRAHAA 272
SG G + V+ + L+D+Y+ CG + A R+F M Q NVF ++ +I +A G AA
Sbjct: 92 SGLGL--DAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAA 149
Query: 273 IQLFGDMVKT-ETKPNGVTFIGVLTACS---------HVGLKCYGVSPSTDHYAC--MVD 320
I+L+ +M+ +P+ T+ VL AC+ V + S + D + C ++D
Sbjct: 150 IELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLID 209
Query: 321 LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
+ + GC++EA + + V + VW +++ AC + P
Sbjct: 210 MYAKCGCVDEAWAVFDSTTVR-DAVVWNSMIAACGQNGRP 248
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 272/429 (63%), Gaps = 16/429 (3%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G + A GLF+E+P +D V+W +M+ Y Q KP EA+ F++M+ GV+ T+V ++
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
SACA LG + + + N +VG+AL+DMY+KCG I A ++F M+ ++
Sbjct: 222 SACAHLGALDKGLHLHTYINDNRIEV--NSIVGTALVDMYAKCGKISLATQVFNAMESKD 279
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--------LK 304
V +++++I G A+HG A +LF +M + +PN +TF+ +L+ACSH G L
Sbjct: 280 VLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLD 339
Query: 305 C----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNP 360
C YG+ P +HY C++DLL RAG LEEA++++ MP+EPN GALLG C+IH N
Sbjct: 340 CMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNF 399
Query: 361 EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEG 420
E+ ++ L L+P G YI+LSNIYA+A WDD +VR L+K+ G+ K PG S +E
Sbjct: 400 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 459
Query: 421 DRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPNLRSVLYDVSDEEKKRILMT 479
+G++H F AGD +HP S +I + L ++ RL+ A G+ + VL D+ +E+K+ L
Sbjct: 460 -KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSADTGDVLLDMEEEDKEHALPV 518
Query: 480 HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQD 539
HSEKLA+A+GLL +RI+KNLR+C DCH S+V GREI+VRD RFHHF+D
Sbjct: 519 HSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFED 578
Query: 540 GKCSCGNYW 548
G+CSC ++W
Sbjct: 579 GECSCLDFW 587
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ ++ W +++ Y G ++++L+ MR G+ P T+ +L AC +
Sbjct: 170 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 229
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +H I + VG ++ MY KCG + + +VF+ M +DV++W +I
Sbjct: 230 LDKGLHLHT-YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIA 288
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +G ++ A LF E M+ AGVE + +T
Sbjct: 289 GMAIHGHVKEAQRLFKE-------------------------------MKEAGVEPNDIT 317
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V ++SAC+ G++ + + S +G V +ID+ ++ G +++A +
Sbjct: 318 FVAMLSACSHAGMVDEGQKLLDCM-SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGT 376
Query: 248 MK-QRNVFSYSSMILGFAMHG 267
M + N + +++ G +HG
Sbjct: 377 MPMEPNPCALGALLGGCRIHG 397
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 315/543 (58%), Gaps = 48/543 (8%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W A+ GY G+ K+++ LY M + +F S KAC+++ D+ G+ +HAQ
Sbjct: 145 VWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQ- 203
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
+L D V N ++ +Y + G + +VFD M
Sbjct: 204 VLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGM------------------------ 239
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
P ++ V+W +++ G V+ EAIE F MQ G+ +VTL ++ CA++
Sbjct: 240 -------PHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARV 292
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + + S P + V ++L+DMY+KCG++D R+F GM+ +++ S+++
Sbjct: 293 TALGSGKEIHAVIVKSTAKP--DAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNT 350
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK---C---------Y 306
+I G+A++GR A++ F +M+ + P+G+TFI +L+ CSH GL C Y
Sbjct: 351 LITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDY 410
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G+SP+ +HYAC+VD+LGRAG ++EAL++V+ MP +P G +WG+LL +C++H N +A+
Sbjct: 411 GISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAV 470
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A LFELEP+ GNY++LSNIYA+AGMW+ V VR ++ G+ K G SWL+ + IH
Sbjct: 471 AKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQ-IKSKIH 529
Query: 427 EFRAGDLTH-PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
F AG NS E ++ L++ ++ GY P+ VL+DVS+E + + HSE+LA
Sbjct: 530 TFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLA 589
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
F L+ T+ G +RI KNLR+C DCH ++ S+V GR IV+RD RFHHF+DG CSC
Sbjct: 590 TMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCK 649
Query: 546 NYW 548
+YW
Sbjct: 650 DYW 652
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 44/285 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + ++N W +LI G + + + ++I + M+ +G+G TL+ + C V
Sbjct: 235 VFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTA 294
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IHA I+ D V N+++ MY KCG + R+VF+ M +D+ SW LI
Sbjct: 295 LGSGKEIHA-VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLIT 353
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA NG M EA+E F+ M +G D +T
Sbjct: 354 GYAINGRMT-------------------------------EAMESFQEMICSGFSPDGIT 382
Query: 188 LVGVISACAQLGVIKYANWVCEIAE--GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ ++S C+ G+ A+ C + E +G V + L+D+ + G I +A I
Sbjct: 383 FIALLSGCSHAGL---ADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIV 439
Query: 246 VGMKQRNVFSYSSMILGFAMHG-RAHAAIQLFGDMVKT--ETKPN 287
M F + I G ++ R H + L + K E +PN
Sbjct: 440 KNMP----FKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPN 480
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS---SMILGFAMHGRAHAAIQL 275
+NN + LI ++S C +D+A R+F + S +M +G++ +G A+ L
Sbjct: 106 LNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLL 165
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVDLLGR 324
+ +MV + F L ACS +G G + P ++ L
Sbjct: 166 YYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSE 225
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLG 352
GC +EAL++ + MP N W +L+
Sbjct: 226 DGCFDEALRVFDGMP-HRNVVSWNSLIA 252
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/547 (36%), Positives = 317/547 (57%), Gaps = 52/547 (9%)
Query: 3 SFPRLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFK 60
S+ VF ++ K N F+W LIRGY G+ + SLY MR G + P + T L K
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A T + DV LG+ IH+ ++ GF S +YV N+++ +Y CG
Sbjct: 130 AVTTMADVRLGETIHS-VVIRSGFGSLIYVQNSLLHLYANCG------------------ 170
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
D+ SA +F+++P KD VAW +++ G+ +N KP EA+ + M G
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D T+V ++SACA++G + V G N+ + L+D+Y++CG +++
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL--TRNLHSSNVLLDLYARCGRVEE 275
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACS 299
A +F M +N S++S+I+G A++G AI+LF M TE P +TF+G+L ACS
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H G+ + Y + P +H+ CMVDLL RAG +++A + ++ MP++PN +W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LLGAC +H + ++A+ A + +LEP+ G+Y++LSN+YAS W DV ++R+ +
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 408 GLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+KK PG+S +E G+R +HEF GD +HP S I L ++ RL+++GY P + +V
Sbjct: 456 GVKKVPGHSLVEVGNR--VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +EEK+ ++ HSEK+A+AF L++T + + ++KNLR+C DCHL + S+V REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 527 VVRDNMR 533
VVRD R
Sbjct: 574 VVRDRSR 580
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 309/554 (55%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF++++ K+ WT +I Y +++ ++ ++EGI + ++ +AC+ +
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLET 482
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L +Q+H I G DL V N +I +Y +CG + S K+F+ + ++D+
Sbjct: 483 ILLAKQLHCYAIRNGLL--DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDI-------- 532
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
V WT+M+ Y + EA+ F MQ V+ D V
Sbjct: 533 -----------------------VTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVA 569
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV ++ A L + V F +V S+L+DMYS CGS+ A ++F
Sbjct: 570 LVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV--SSLVDMYSGCGSLSGALKVFNA 627
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+K +++ +++MI MHG AI LF M++T P+ V+F+ +L ACSH L
Sbjct: 628 VKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEG 687
Query: 304 KCY--------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
KCY + P +HYAC+VDLLGR+G EEA + ++ MP++P VW +LLGAC+
Sbjct: 688 KCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACR 747
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H+N E+A +AAN L ELEPD GNY+++SN++A G W++ VR + GL+K+P
Sbjct: 748 VHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPAC 807
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKK 474
SW+E V H F D +H ++ I L ++ +RL+ + GY + RSVL+DVS+EEK
Sbjct: 808 SWIEIGNNV-HTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKV 866
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSE+LA++FGL+ T PG +RI KNLR+C DCH F S++ R+IVVRD RF
Sbjct: 867 DVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRF 926
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSCG++W
Sbjct: 927 HHFSGGSCSCGDFW 940
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 48/368 (13%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+DS R VF ++ K+ W +++ Y+ G ++I M R G P + +L
Sbjct: 316 VDSALR-VFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSS 374
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + + G+++HA I SD VGNT++ MY+KC ++ S VFD M +D +
Sbjct: 375 AVGHLGWLLNGKEVHAYAIK-QRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHI 433
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT +I YA Q+++ EA+E F Q G
Sbjct: 434 SWTTIITCYA-------------------------------QSSRHIEALEIFREAQKEG 462
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
++ D + + ++ AC+ L I A + A +G + ++VV + +ID+Y +CG +
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNG---LLDLVVKNRIIDIYGECGEVYH 519
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ ++F ++Q+++ +++SMI +A G + A+ LF +M T+ +P+ V + +L A
Sbjct: 520 SLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGG 579
Query: 301 V-----GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ G + +G + + + +VD+ G L ALK+ + + + +W A
Sbjct: 580 LSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTA 638
Query: 350 LLGACQIH 357
++ A +H
Sbjct: 639 MINATGMH 646
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 39/301 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR---REGIGPVSFTLSALFKAC 62
RL+F+ + + F W ALI Y+ G +++ +Y +MR G+ P TL+++ KA
Sbjct: 115 RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKAS 174
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVS 121
D G ++H + G +V N +I MY KCG L + +VF+ M + RDV S
Sbjct: 175 GVEGDGRCGCEVHGLAVK-HGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVAS 233
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
W +M++G +QN +A++ F MQ A +
Sbjct: 234 -------------------------------WNSMISGCLQNGMFLQALDLFRGMQRAVL 262
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ T VGV+ C +L + + SG +N + +AL+ MY+KCG +D A
Sbjct: 263 SMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG-SEVN--IQCNALLVMYTKCGRVDSA 319
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F + +++ S++SM+ + +G AI+ +M++ +P+ + + +A H+
Sbjct: 320 LRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHL 379
Query: 302 G 302
G
Sbjct: 380 G 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 170/381 (44%), Gaps = 50/381 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++I G + G ++ L+ M+R + S+T + + CTE+ ++LG+++HA +
Sbjct: 234 WNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHA-AL 292
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L G ++ N ++ MY KCG ++SA
Sbjct: 293 LKSGSEVNIQC-NALLVMYTKCG-------------------------------RVDSAL 320
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F E+ KD ++W +M++ YVQN EAIE+ M G + D+ +V + SA LG
Sbjct: 321 RVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ V A ++ VG+ L+DMY KC I+ + +F M+ ++ S++++
Sbjct: 381 WLLNGKEVHAYAIKQRLD--SDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------GLKCYGVSPST 312
I +A R A+++F + K K + + +L ACS + L CY +
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL 498
Query: 313 DHYAC---MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR---NPEIAQIA 366
++D+ G G + +LKM E + + + W +++ C + N + A
Sbjct: 499 LDLVVKNRIIDIYGECGEVYHSLKMFETVE-QKDIVTWTSMIN-CYANSGLLNEALVLFA 556
Query: 367 ANHLFELEPDKIGNYIILSNI 387
+++PD + IL I
Sbjct: 557 EMQSTDVQPDSVALVSILGAI 577
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 68 VSLGQQIHAQTILLGGFTSDL-YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V+ G Q+HA + G D ++ ++ MY KCG + +R +FD M R V SW LI
Sbjct: 74 VAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALI 133
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY ++G A G++ + L +GV D
Sbjct: 134 GAYLSSGSACEALGVYRAMRLS----------------------------AASGVAPDGC 165
Query: 187 TLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL V+ A GV CE+ G + V +ALI MY+KCG +D A R+F
Sbjct: 166 TLASVLKAS---GVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVF 222
Query: 246 VGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M R+V S++SMI G +G A+ LF M + N T +GVL C+ +
Sbjct: 223 ELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV A AQ GV +A+ +A GS G ++ + + L+ MY KCG + DA +F G
Sbjct: 67 LVAAKKAVAQ-GVQVHAH---AVATGSLEG--DDGFLATKLLFMYGKCGRVADARLLFDG 120
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM---VKTETKPNGVTFIGVLTA------- 297
M R VFS++++I + G A A+ ++ M + P+G T VL A
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 298 ---CSHVGLKC-YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
C GL +G+ ST ++ + + G L+ A+++ E M + W +++
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 354 C 354
C
Sbjct: 241 C 241
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/554 (36%), Positives = 309/554 (55%), Gaps = 50/554 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ KN WT +I G +++ L+ +M R I S + + AC
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G Q+H I LG F + YV ++I Y C +G SRKVFDE V
Sbjct: 241 FHMGIQVHGLIIKLG-FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA------- 292
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WTA+++GY N K +A+ F M + + T
Sbjct: 293 ------------------------VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+++C+ LG + + + +A G + VG++L+ MYS G+++DA +F+
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLE--TDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ ++++ S++S+I+G A HGR A +FG M++ +P+ +TF G+L+ACSH G G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKG 446
Query: 308 -------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ HY CMVD+LGR G L+EA +++E+M V+PN VW ALL AC
Sbjct: 447 RKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H + + + AA +F L+ Y++LSNIYASAG W +VS++R +K G+ K PG
Sbjct: 507 RMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPG 566
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+ RG HEF +GD P+ + I + L L ++L+ GY P+ RS L+DV DE+K+
Sbjct: 567 SSWVV-IRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKE 623
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSE+LA+AFGL+ T G+ V +MKNLR+CEDCH + S V+GREIV+RD +RF
Sbjct: 624 EMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRF 683
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSCG+YW
Sbjct: 684 HHFKNGTCSCGDYW 697
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 175/417 (41%), Gaps = 87/417 (20%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF QV + L+T +I GY L D+++L+ M PV
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM------PVR------------- 95
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ N+MI V+CG + + K+FDEMPER VVSWT +
Sbjct: 96 ---------------------DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAM 134
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV------------------------ 161
+ +G ++ A LF ++P+KD AW +MV GY+
Sbjct: 135 VNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWT 194
Query: 162 -------QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
QN + EA++ F+ M +++ VI+ACA V +
Sbjct: 195 TMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
GF + V ++LI Y+ C I D+ ++F V +++++ G++++ + A+
Sbjct: 255 GF--LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG---------VSPSTDHYA--CMVDLLG 323
+F M++ PN TF L +CS +G +G + TD + +V +
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL--EPDKI 378
+G + +A+ + K+ + + W +++ C H + A + + L EPD+I
Sbjct: 373 DSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI 428
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 312/561 (55%), Gaps = 52/561 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE---GIGPVSFTLSALFKAC 62
R +F+++ ++ F W+AL+ GY G + +++LY M+ E FT S+ A
Sbjct: 115 RELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAA 174
Query: 63 TEVLDVSLGQQIHAQTILLG--GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
G+++H + G D + + + MY KCG + +R+VFD MP RD V
Sbjct: 175 AAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAV 234
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYA 179
SW TAMV Y + E F M +
Sbjct: 235 SW-------------------------------TAMVERYFDGGRGGEGFRLFLHMLRTR 263
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
GV + T GV+ ACAQ V + V SG G ++ SAL+ MYSKCG +
Sbjct: 264 GVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTG--DSCFAESALLRMYSKCGDMG 321
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A R+F M + ++ S++++I G+A +G+ A++ F +++ KP+ VTF+GVL+AC+
Sbjct: 322 SAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACA 381
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + Y + + DHYAC++DLL R+G E A KM+ M V+PN +W
Sbjct: 382 HAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLW 441
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
+LLG C+IH+N +A+ AA LFE+EP+ Y+ L+NIYAS G++D+V VRR+++
Sbjct: 442 ASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESK 501
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G+ K P SW+E R V H F GD +HP + EI L L ++ +GY ++ VL+D
Sbjct: 502 GITKMPASSWIEVGRRV-HVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V DE+K++ + HSE+LA+AFG++ T G+ +++ KNLRIC DCH + SQ++ R+I+
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDII 620
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD+ RFHHF+DG CSC +YW
Sbjct: 621 VRDSNRFHHFKDGICSCRDYW 641
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 151/309 (48%), Gaps = 29/309 (9%)
Query: 110 VFDEMPERDVVSWTELIVAYANNG-DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+F + D+ S LI A + + + SA LF+ +P +D AW+A+V+GY ++ +P
Sbjct: 85 LFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEA 144
Query: 169 AIEYFERMQYA----GVETDYVTLVGVISA----CAQLGVIKYANWVCEIAEGSGFGPIN 220
A+ + RMQ G + ++ + +A C + G + + V + +G
Sbjct: 145 ALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAG----G 200
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
+ V+ SAL DMY+KCG +DDA R+F M R+ S+++M+ + GR +LF M+
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 281 KTE-TKPNGVTFIGVLTACSHVGLKCYG------VSPSTDHYACMVD-----LLGRAGCL 328
+T +PN T+ GVL AC+ ++ +G ++ S +C + + + G +
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSN 386
A+++ E M +P+ W A++ + PE A + ++PD + +LS
Sbjct: 321 GSAVRVFEAM-AKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 387 IYASAGMWD 395
A AG+ D
Sbjct: 380 C-AHAGLVD 387
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 311/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++ WT ++ G G +++ ++ MR EG+G +T ++ AC +
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+QIHA I + +++VG+ ++ MY KC + + VF M R+++S
Sbjct: 294 SEEGKQIHAY-ITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIIS------ 346
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WTAM+ GY QNA EA+ F MQ G++ D T
Sbjct: 347 -------------------------WTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L VIS+CA L ++ +A SG + + V +AL+ +Y KCGSI+DA+R+F
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGL--MRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M + S+++++ G+A G+A I LF M+ KP+GVTFIGVL+ACS GL
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG 499
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K + + P DHY CM+DL R+G +EA + +++MP P+ W LL +C+
Sbjct: 500 CDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCR 559
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ N EI + AA +L E +P +Y++L +++A+ G W +V+ +RR ++ +KK PG
Sbjct: 560 LRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGC 619
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ + +H F A D +HP S+ I + L L ++ +GY+P++ SVL+DV+D +K
Sbjct: 620 SWIKY-KNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVH 678
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
++ HSEKLA+AFGL+ +RI+KNLR+C DCH S++ GR+I+VRD +RFH
Sbjct: 679 MISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFH 738
Query: 536 HFQDGKCSCGNYW 548
F DG CSCG++W
Sbjct: 739 KFSDGTCSCGDFW 751
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 194/392 (49%), Gaps = 18/392 (4%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F + ++ + ALI G+ G S+ LY ++ R E + P TLSA+ + +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D +LG +H Q + LG F + +VG+ ++ MY K G + +R+VF EM + VV + LI
Sbjct: 161 DRALGHSVHCQVLRLG-FGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+E A GLF + +D + WT MVTG QN EA++ F RM+ GV D
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +++AC L + + + + +NV VGSAL+DMYSKC SI A +F
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYE--DNVFVGSALVDMYSKCRSIRLAEAVFR 337
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG---- 302
M RN+ S+++MI+G+ + + A++ F +M KP+ T V+++C+++
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397
Query: 303 ---LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL-GAC 354
C + Y +V L G+ G +E+A ++ ++M W AL+ G
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVTGYA 456
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
Q + E + L L+PD + +LS
Sbjct: 457 QFGKAKETIDLFEKMLVNGLKPDGVTFIGVLS 488
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
++ N ++ Y K G L +R+VFDEMP+ ++ + L+ A A++ + LF +P +
Sbjct: 49 FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPER 108
Query: 149 DKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
D V++ A++TG+ P +++ Y ++ V +TL +I + L + V
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV 168
Query: 208 -CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
C++ GFG VGS L+DMY+K G I DA R+F M+ + V Y+++I G
Sbjct: 169 HCQVLR-LGFGAY--AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
A LF MV ++ +T+ ++T + GL+
Sbjct: 226 KMIEDAKGLFQLMVDRDS----ITWTTMVTGLTQNGLQ 259
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
P +F L+ L A + G+ A+ + +L+ N ++ +
Sbjct: 45 APPTFLLNHLLTAYAKS-----GRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDME 99
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKD-----KVAWTAMVTGYVQN 163
++F MPERD VS+ LI +++ G + L+ L ++ ++ +AM+ V +
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM--VAS 157
Query: 164 AKPREAIEYFERMQYAGVETDYVTLVG--VISACAQLGVIKYANWVCEIAEGSGFGPINN 221
A A+ + Q + VG ++ A++G+I+ A V + E
Sbjct: 158 ALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA------KT 211
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
VV+ + LI +C I+DA +F M R+ ++++M+ G +G A+ +F M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 282 TETKPNGVTFIGVLTAC 298
+ TF +LTAC
Sbjct: 272 EGVGIDQYTFGSILTAC 288
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/562 (36%), Positives = 312/562 (55%), Gaps = 58/562 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGY--ILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
S+ R VF ++ + + +IR + H S+ + SMR GI +FT + K
Sbjct: 39 SYARYVFSRIPSPDTIAYNTIIRSHSRFFPSH---SLFYFFSMRSNGIPLDNFTFPFVLK 95
Query: 61 ACTEVLDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
AC+ L +H ++++ G SD++V N +I +Y CG
Sbjct: 96 ACSR-----LQINLHLHSLIVKYGLDSDIFVQNALICVYGYCG----------------- 133
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+E A +F+E+ +D V+W+ ++ ++ N EA++ FE+MQ
Sbjct: 134 --------------SLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Query: 180 G-VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V D VT++ VISA + LG ++ WV G G +V +G+ALIDM+S+CGSI
Sbjct: 180 DKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGV--SVALGTALIDMFSRCGSI 237
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D++ +F M RNV +++++I G +HGR+ A+ +F M K+ +P+ VTF GVL AC
Sbjct: 238 DESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVAC 297
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL K Y + P DHY CMVD+LGRAG L EA VE+MP++PN +
Sbjct: 298 SHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSII 357
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LLGAC H N +A+ + ++ + G+ ++LSN+Y +AG W + + +R ++
Sbjct: 358 WRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMRE 417
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+ K PG S + D+ IHEF +GD +HP S +I + L ++ L+ GY ++VL+
Sbjct: 418 KRIGKEPGCSSINVDQ-TIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLH 476
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
D+ +EE++ L HSEKLA+AF +L+ T+RIMKNLRIC DCH FM S R+I
Sbjct: 477 DIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKI 536
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
++RD RFHHF+ G CSC +YW
Sbjct: 537 IIRDRNRFHHFEKGLCSCHDYW 558
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 322/563 (57%), Gaps = 55/563 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQG--HLK-DSISLYCSM-RREGIGPVSFTLSALFKACT 63
VF+QV N F+W LIR HLK ++I LY +M +R P + T + KAC
Sbjct: 78 VFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACA 137
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+Q HA + LG F SD+Y+ N++I Y CG
Sbjct: 138 YLFALFEGKQAHAHLLKLG-FQSDVYINNSLIHFYASCG--------------------- 175
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ESA +F+++P + V+W AM+ +V + A++ F + Q E
Sbjct: 176 ----------SLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEP 225
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPI-NNVVVGSALIDMYSKCGSIDDA 241
D T+ VI+ACA L + W + G ++V+V ++L+DMY KCGS+D A
Sbjct: 226 DGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIA 285
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSH 300
+IF GM++ +V S++SMILGFAMHG+ A++ F M++ + PN +TF+GVL+AC+H
Sbjct: 286 TQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNH 345
Query: 301 ------------VGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+ + Y + P +HY C+VD+L RAG ++EAL++V MP++P+ +W
Sbjct: 346 RYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWR 405
Query: 349 ALLGAC-QIHRNPEIAQIAANHLFELE-PDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
+LL +C + + + E+++ A + E E D G Y++LS +YASA W+DV VR+L+
Sbjct: 406 SLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTN 465
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL-RSVL 465
G+ K PG S +E D GV HEF AGD +HP + EI Q L + +R+ + GY+P+ ++ +
Sbjct: 466 NGILKEPGCSLIEVD-GVTHEFFAGDTSHPQTKEIYQVLNVVEERIDSTGYKPDYSQAPM 524
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D + K+ L HSE+LA+A GLL PG +RI KNLR+C+DCH S++ E
Sbjct: 525 VDELNTSKRDSLRLHSERLAIALGLLNLKPGMPIRIFKNLRVCDDCHKVTGLISEIFNVE 584
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD +RFHHF+DG CSC +YW
Sbjct: 585 IIVRDRVRFHHFKDGSCSCMDYW 607
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 294/509 (57%), Gaps = 40/509 (7%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + +LS KA D Q+HA + LG +D+ + T++ Y KCG L +RK
Sbjct: 109 PDALSLSFALKASARCSDAHTTVQLHALVLRLG-VAADVRLLTTLLDSYAKCGDLASARK 167
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFDEM RDV +W L+ A + A LF+ L Q RE
Sbjct: 168 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL------------ANSFQELPSRE- 214
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
E + VT+V +SACAQ+G++K +V E A+ FG NV V ++LI
Sbjct: 215 ------------EPNEVTIVAALSACAQIGLLKDGMYVHEFAK--RFGLDRNVRVCNSLI 260
Query: 230 DMYSKCGSIDDAYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
DMYSKCGS+ A +F +K + + SY++ I +MHG A++LF +M T +P+
Sbjct: 261 DMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEPD 319
Query: 288 GVTFIGVLTACSHVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
GVT++ VL C+H GL G V+P+ HY +VDLLGRAG L EA V MP
Sbjct: 320 GVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMP 379
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
+ +W LLGA ++H E+A++AAN L EL + G+Y++LSN+YAS W DV R
Sbjct: 380 FPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGR 439
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR ++ ++K PG+S+ E D GV+H+F GD HP EI +AL D++ R+ GY+P
Sbjct: 440 VRDTMRSNDVRKVPGFSYTEID-GVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEP 498
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+R++KNLRIC DCH+ S
Sbjct: 499 ETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLIS 558
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ GR IV+RD RFH F+DG+CSC +YW
Sbjct: 559 KAYGRVIVIRDRARFHRFEDGQCSCRDYW 587
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 312/556 (56%), Gaps = 51/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI--GPVSFTLSALFKACTEV 65
+F+++ +N WT++I G G ++++ L+ M G+ P S T + AC
Sbjct: 157 LFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANA 216
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G QIHA LG ++ D Y+ L
Sbjct: 217 SALYQGVQIHAHVFKLG-YSFDAYIS-------------------------------AAL 244
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YAN ME + +F+ + V WTA+VTGY N K +A++ F M GV +
Sbjct: 245 ITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQ 304
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ +++C L + +W EI + G +V VG++LI MY +CG+++D I
Sbjct: 305 SSFTSALNSCCGLEAL---DWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVI 361
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + ++N+ S++S+I+G A HG A+ F MV++ +P+ +TF G+L+ACSH G+
Sbjct: 362 FKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMS 421
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G DHYACMVD+LGR+G LEEA +++ MPV+ N VW LL
Sbjct: 422 QKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 481
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC +H E+A+ AA + +LEP Y++LSN+YASA W DVSR+RR +K G+ K
Sbjct: 482 ACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQ 541
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+ +G +EF +GD +HP+S I Q L L +L+ GY P+ R L+DV DE+
Sbjct: 542 PGRSWIT-IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQ 600
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSE+LA+ FGL++T G+T+ +MKNLR+C DCH + ++++ R+I+VRD+
Sbjct: 601 KEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDST 660
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF DG+CSCG+YW
Sbjct: 661 RFHHFMDGRCSCGDYW 676
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 185/390 (47%), Gaps = 31/390 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS--ALFKACT 63
R VF++V + + +L+T +I GY ++ L+ M PV +S ++ K C
Sbjct: 31 RTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM------PVKDVVSWNSMIKGCF 84
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D+++ +++ + + TMI +++ G + + +F +MP RD+ +W
Sbjct: 85 DCADLTMARKLFDEMP-----ERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWN 139
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y NG +E LF E+P ++ ++WT+M+ G Q+ + EA+ F +M GVE
Sbjct: 140 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 199
Query: 184 DYV--TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T VI+ACA + V A G + + +ALI Y+ C ++D+
Sbjct: 200 KPTSSTYCCVITACANASALYQG--VQIHAHVFKLGYSFDAYISAALITFYANCKQMEDS 257
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F G NV +++++ G+ ++ + A+++FG+M++ PN +F L +C +
Sbjct: 258 LRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGL 317
Query: 302 GLKCYG---------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+G + TD + ++ + R G L + + + +++ + N W ++
Sbjct: 318 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSV 376
Query: 351 LGACQIHRNPEIAQIAANHLFE--LEPDKI 378
+ C H A N + +EPD+I
Sbjct: 377 IVGCAQHGCGMWALAFFNQMVRSMVEPDEI 406
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 26/274 (9%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
+MI +++ + +R VFD++ DV +T +I YA N + A LF E+P+KD V
Sbjct: 15 QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVV 74
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W +M+ G A A + F+ M E V+ +I+ Q G I E+A
Sbjct: 75 SWNSMIKGCFDCADLTMARKLFDEMP----ERSVVSWTTMINGFLQFGKI-------EVA 123
Query: 212 EGSGFG-PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAH 270
EG + P ++ +++I Y G ++D R+F M RNV S++SMI G HGR+
Sbjct: 124 EGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSE 183
Query: 271 AAIQLFGDMV--KTETKPNGVTFIGVLTACSHVGLKCYGVSP---------STDHY--AC 317
A+ LF M+ E KP T+ V+TAC++ GV S D Y A
Sbjct: 184 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAA 243
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ +E++L++ + N +W AL+
Sbjct: 244 LITFYANCKQMEDSLRVFHG-KLHMNVVIWTALV 276
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 286/474 (60%), Gaps = 17/474 (3%)
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELIVA 128
+G +HA + G DLYV N +I Y CG + RKVFDE+P RDVV+W ++
Sbjct: 148 MGAHVHALAVKAGA-AGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLAG 206
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y G + A +F+ +P++D+V+W+ +V GYV+ + A+ F+ M GV+ + +
Sbjct: 207 YVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEAAI 266
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V +SA AQLG+++ +V E+ + +G N+ G+AL+DMYSKCGS+ A +F M
Sbjct: 267 VTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNL--GAALVDMYSKCGSVAAAKEVFDAM 324
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----- 303
R+VF+++SMI G A HG H A+QLF V P +TF+GVL ACS GL
Sbjct: 325 PWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEGR 384
Query: 304 -------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ YG+ +HY CMVDLL RAG ++EA++++E M + P+ +WG +L AC+
Sbjct: 385 WYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTVLSACKR 444
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H ++ N L EL+P G Y++L++IYA A WD+V +VR+L+ G K+ G+S
Sbjct: 445 HGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 504
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
+E G++H+F GD+ H +S +I L + RL GY P++ SVL+D+ DEEK
Sbjct: 505 LMEA-HGIVHKFLVGDMDHKDSVQIYNMLCMIDRRLAEAGYVPDVSSVLHDIGDEEKVHA 563
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
+ HSE+LA+A+G + G+ +RI+KNL +C DCH F ++V GREI+VRD
Sbjct: 564 IKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIIVRD 617
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W+ ++ GY+ +G L+ ++ ++ +M +G+ + A ++
Sbjct: 217 REVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEAAIVTALSAAAQL 276
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ +H + I G + +G ++ MY KCG + +++VFD MP RDV +W +
Sbjct: 277 GLLEQGKFVH-EVIKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFDAMPWRDVFAWNSM 335
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G G+ +A++ FE+ G
Sbjct: 336 ICGLATHG------------------------LGH-------DAVQLFEKFVSEGFCPTN 364
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T VGV++AC++ G++ W ++ +G + + ++D+ S+ G + +A +
Sbjct: 365 ITFVGVLNACSRTGLVDEGRWYFKLM-AEKYGIESEMEHYGCMVDLLSRAGLVQEAIELI 423
Query: 246 VGM 248
GM
Sbjct: 424 EGM 426
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 310/559 (55%), Gaps = 57/559 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ VF + N F W + RGY + ++ Y M I P + T L KA
Sbjct: 81 SYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAI 140
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ L+V G+ IH+ TI GF S ++V N+++ +Y CG
Sbjct: 141 SKSLNVREGEAIHSVTIR-NGFESLVFVQNSLLHIYAACG-------------------- 179
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D ESA +F + +D VA +++ G+ N +P EA+ F M GVE
Sbjct: 180 -----------DTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVE 228
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V ++SA A+LG ++ V G N V ++L+D+Y+KC +I +
Sbjct: 229 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLR--ENSHVTNSLLDLYAKCDAIWEX- 285
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+RN S++S+I+G A++G A++LF +M P+ +TF+GVL ACSH G
Sbjct: 286 -------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCG 338
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+ + +G+ P +HY CMVDLL RAG +++A + ++ MPV+PN W L
Sbjct: 339 MLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTL 398
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC IH + + + A +HL +LEP G+Y++LSN+Y S W DV +RR + G+K
Sbjct: 399 LGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVK 458
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K GYS +E G+R ++EF G+ +HP S ++ L + + L+ +GY P+ +VL D+
Sbjct: 459 KTSGYSLVELGNR--VYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIE 516
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+EEK++ L HSEK A+AF L T+PG T+R+MKNLR+C DCH+ + ++V REIV+R
Sbjct: 517 EEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIR 576
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D RFHHF+ G CSC +YW
Sbjct: 577 DRGRFHHFRGGSCSCKDYW 595
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 306/574 (53%), Gaps = 97/574 (16%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N LWTA++ GY G +I + MR EGI FT ++ AC + G Q+
Sbjct: 203 RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQV 262
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA------ 128
H I+ GF ++++VG+ ++ MY KCG L +R++ + M D VSW +IV
Sbjct: 263 HG-CIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL 321
Query: 129 ----------------------------------YANNGDMESAGGLFNELPLKDKVAWT 154
YA G + A +F ++ KD ++WT
Sbjct: 322 GEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWT 381
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
++VTG V N EA+ F M+ G+ D + + V+SA
Sbjct: 382 SLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA-------------------- 421
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+ ++L+ MY+KCG I+DA ++F M+ ++V +++++I+G+A +GR Q
Sbjct: 422 ---------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQ 472
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKM 334
++ YG+ P +HYACM+DLLGR+G L EA ++
Sbjct: 473 SMEEV--------------------------YGIKPGPEHYACMIDLLGRSGKLMEAKEL 506
Query: 335 VEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMW 394
+ +M V+P+ VW ALL AC++H N E+ + AAN+LFELEP Y++LSN+Y++AG W
Sbjct: 507 LNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKW 566
Query: 395 DDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQA 454
++ ++ RRL+K+ G+ K PG SW+E V H F + D +HP + EI + +++ ++
Sbjct: 567 EEAAKTRRLMKLRGVSKEPGCSWIEMSSKV-HRFMSEDRSHPRTAEIYSKVDEIMILIKE 625
Query: 455 DGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLF 514
GY P++ L+D+ +E K+ L HSEKLA+AFGLLT PGA +RI KNLRIC DCH
Sbjct: 626 AGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTA 685
Query: 515 MCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
M S V R +++RD+ FHHF++G CSC +YW
Sbjct: 686 MKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 26/371 (7%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R +G +F+ K C ++ L I G S N ++ KCG
Sbjct: 1 MYRLNLGIYTFSR----KVCHQLEHTELNHHIRRFVNSCGTVHSS-SDSNWVLSNLSKCG 55
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ +RK+FD MP+RD SW +I AYAN+G + A LF E P++ + W+++++GY +
Sbjct: 56 RVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCR 115
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
EA+E F MQY G + T V+ C+ +++ + A + F +N
Sbjct: 116 YGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFD--SNA 173
Query: 223 VVGSALIDMYSKCGSIDDAYRIF-VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V + L+DMY+KC I +A +F + +RN +++M+ G++ +G H AI+ F DM
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG 233
Query: 282 TETKPNGVTFIGVLTACSHV-----GLKCYGVSPSTDHYA------CMVDLLGRAGCLEE 330
+ N TF +LTAC + G + +G + A +VD+ + G L
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSN 293
Query: 331 ALKMVEKMPVEPNGGVWGALLGAC--QIHRNPEIAQIAANHLFELEPDKIGNYIILSN-- 386
A +M+E M V+ + W +++ C Q ++ HL ++ D+ +++N
Sbjct: 294 ARRMLETMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNAL 352
Query: 387 --IYASAGMWD 395
+YA G +D
Sbjct: 353 VDMYAKRGYFD 363
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 181/405 (44%), Gaps = 64/405 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + ++ W++LI GY G +++ L+ M+ EG P FT ++ + C+
Sbjct: 92 RKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMY 151
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTE 124
+ + G+QIHA I F S+ +V ++ MY KC + + +F+ P+ R+ V WT
Sbjct: 152 VLLEKGKQIHAHAIKT-QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTA 210
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ Y+ NGD +AIE F M+ G+E +
Sbjct: 211 MVTGYSQNGD-------------------------------GHKAIECFRDMRGEGIECN 239
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T +++AC + + V SGFG NV VGSAL+DMYSKCG + +A R+
Sbjct: 240 QFTFPSILTACGSISACGFGAQVHGCIVRSGFGA--NVFVGSALVDMYSKCGDLSNARRM 297
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
M+ + S++SMI+G G A+ LF M K + T+
Sbjct: 298 LETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY------------- 344
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA- 363
PS + A +VD+ + G + A + EKM + + W +L+ C + + E A
Sbjct: 345 -----PSLVNNA-LVDMYAKRGYFDYAFDVFEKM-TDKDVISWTSLVTGCVHNGSYEEAL 397
Query: 364 -QIAANHLFELEPDKIGNYIILS-------NIYASAGMWDDVSRV 400
+ + PD+I +LS ++YA G +D ++V
Sbjct: 398 RLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKV 442
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 50/276 (18%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K+ WT+L+ G + G ++++ L+C MR GI P ++A+ A
Sbjct: 368 VFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA------ 421
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ N+++ MY KCG + + KVFD M +DV++WT LIV
Sbjct: 422 ----------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIV 459
Query: 128 AYANNGD----MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
YA NG +S ++ P + A M+ ++ K EA E +M V+
Sbjct: 460 GYAQNGRGRDYFQSMEEVYGIKPGPEHYA--CMIDLLGRSGKLMEAKELLNQM---AVQP 514
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG-PINNVVVGSALIDMYSKCGSIDDAY 242
D +++AC G ++ E A + F N V L ++YS G ++A
Sbjct: 515 DATVWKALLAACRVHGNVELG----ERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAA 570
Query: 243 RIFVGMKQRNV--------FSYSSMILGFAMHGRAH 270
+ MK R V SS + F R+H
Sbjct: 571 KTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSH 606
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 215/625 (34%), Positives = 334/625 (53%), Gaps = 85/625 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +++ W A+I G I G+ ++ + MR EGI S T++++ C ++
Sbjct: 227 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQL 286
Query: 66 LDVSLGQQIH------------------------------AQTILLGGFTSDLYVGNTMI 95
D+S IH AQ + F D+ N++I
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346
Query: 96 GMYVKCGFLGCSRKVFDEMP----ERDVVSWTEL--IVA--------------------- 128
Y + +R F +M E D+++ L I A
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406
Query: 129 -------------YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
YA G ++SA +FN +P+KD V+W +++GY QN EAIE +
Sbjct: 407 MEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRM 466
Query: 176 MQYA-GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
M+ ++ + T V +++A A +G ++ + + +V VG+ LID+Y K
Sbjct: 467 MEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL--DVFVGTCLIDLYGK 524
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG + DA +F + + + ++++I +HG A++LF +M KP+ VTFI +
Sbjct: 525 CGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISL 584
Query: 295 LTACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
L+ACSH GL + YG+ PS HY CMVDLLGRAG LE A ++ MP+ P+
Sbjct: 585 LSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD 644
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+WGALLGAC+IH N E+ + A++ LFE++ + +G Y++LSNIYA+ G W+ V +VR L
Sbjct: 645 ASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSL 704
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
+ GLKK PG+S +E +R V F G+ +HP EI L L ++++ GY P+
Sbjct: 705 ARERGLKKTPGWSSIEVNRRV-DIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSF 763
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
VL DV ++EK+ IL +HSE+LA+AFG+++T P + +RI KNLR+C DCH S++
Sbjct: 764 VLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITE 823
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
REIVVRD+ RFHHF++G CSCG+YW
Sbjct: 824 REIVVRDSKRFHHFKNGICSCGDYW 848
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 164/356 (46%), Gaps = 58/356 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKA 61
S R F+Q++ K+ + W ++I Y+ GH +++I Y + +T + KA
Sbjct: 125 SLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA 184
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++D G++IH LG F D++V ++I MY + GF+G +R
Sbjct: 185 CQTLVD---GRKIHCWVFKLG-FQWDVFVAASLIHMYSRFGFVGIAR------------- 227
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
LF+++P +D +W AM++G +QN +A++ + M+ G+
Sbjct: 228 ------------------SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 269
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
D VT+ ++ CAQLG I A + I G F + V +ALI+MY+K G++
Sbjct: 270 NMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEF----ELFVSNALINMYAKFGNLG 325
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA ++F M R+V S++S+I + + A F M +P+ +T + + + +
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAA 385
Query: 300 HVGLKCYGVSPSTDHYA--------------CMVDLLGRAGCLEEALKMVEKMPVE 341
+ Y S S + ++D+ + G ++ A K+ +PV+
Sbjct: 386 QS--RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK 439
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 150/337 (44%), Gaps = 57/337 (16%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
++LF +CT+ L L +++HA ++ G S+ ++ ++ +Y G + SR FD++
Sbjct: 79 FNSLFDSCTKTL---LAKRLHALLVVSGKIQSN-FISIRLVNLYASLGDVSLSRGTFDQI 134
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE-YF 173
+DV +W +I AY NG REAI+ ++
Sbjct: 135 QRKDVYTWNSMISAYVRNGHF-------------------------------REAIDCFY 163
Query: 174 ERMQYAGVETDYVTLVGVISACAQL-GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
+ + + D+ T V+ AC L K WV ++ GF +V V ++LI MY
Sbjct: 164 QLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKL----GFQW--DVFVAASLIHMY 217
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
S+ G + A +F M R++ S+++MI G +G A A+ + +M + VT
Sbjct: 218 SRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVA 277
Query: 293 GVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+L C+ +G + +G+ ++++ + G L +A K+ ++M +
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR 337
Query: 342 PNGGVWGALLGACQIHRNPEIAQ--IAANHLFELEPD 376
+ W +++ A + + +P A+ L LEPD
Sbjct: 338 -DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPD 373
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/550 (38%), Positives = 297/550 (54%), Gaps = 54/550 (9%)
Query: 16 NPFLWTALIRGYI---LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQ 72
+ FL LIR + L + S + M R P FT L KAC V G
Sbjct: 107 DAFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAFPGV--GV 164
Query: 73 QIHAQTILLGGFTSDLYVGNTMIGMYVKCG--FLGCSRKVFDEMPERDVVSWTELIVAYA 130
Q HA + G FT+D YV NT+I MY G FLG +R VFD M + V+
Sbjct: 165 QAHAAALKFG-FTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVT--------- 214
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
W+AM+ GYV++ +A+ F MQ +GV D VT++G
Sbjct: 215 ----------------------WSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIG 252
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
V++A A LG ++ A WV E G G +V + +ALID +KCG +D A +F GMK+
Sbjct: 253 VLAAAADLGALELARWVGRFVEKEGIG--KSVTLCNALIDALAKCGDLDGAMAVFQGMKE 310
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------- 303
R + S++S+I AM GR A+ +F +M +P+ V FIGVLTACSH G+
Sbjct: 311 RTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGY 370
Query: 304 -----KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
YG+ P +HY CMVD+ GRAG +E A++ V KMP++PN +W L+ AC+ H
Sbjct: 371 FESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHG 430
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
E+ + +L P NY++LSN+YA W + S +RR + G+KK PG S +
Sbjct: 431 RLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLV 490
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E D G +HEF AGD +HP EI + ++ L+ G+ VL D+ +E+K+ L
Sbjct: 491 ELD-GEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLDEEDKEVALQ 549
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSEKLA+AF LL T PG VR++KNLR+C DCH + S V REI+VRD RFH F+
Sbjct: 550 WHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNREIIVRDRSRFHRFK 609
Query: 539 DGKCSCGNYW 548
+G CSC ++W
Sbjct: 610 NGSCSCNDFW 619
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 50/272 (18%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W+A+I GY+ G D++ L+ M+ G+ P T+ + A ++
Sbjct: 201 RNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADL 260
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ L + + + + G + + N +I KCG L + VF M ER +VSWT +
Sbjct: 261 GALELARWV-GRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSV 319
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A A G + +EA+ FE M+ AGV D
Sbjct: 320 IDALAMEG-------------------------------RGKEAVAVFEEMKTAGVRPDD 348
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG--------SALIDMYSKCGS 237
V +GV++AC+ G++ EG G+ + G ++DM+ + G
Sbjct: 349 VAFIGVLTACSHAGMVD---------EGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGM 399
Query: 238 IDDAYRIFVGMKQR-NVFSYSSMILGFAMHGR 268
++ A M + N + +++ HGR
Sbjct: 400 VERAMEFVHKMPMKPNPIIWRTLVAACRAHGR 431
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 317/563 (56%), Gaps = 62/563 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR--EGIGPVSFTLSALFKACTEV 65
VF ++++ N F++ ALI+G+ + +S+ LY M V F++ ++ KAC ++
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L G+Q+H Q +L D +VGN+M+ MY+ G + +R+VFD MP RDVVSW +
Sbjct: 123 LAFDEGRQVHGQ-VLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 126 IVAYANNGDMESAGGLFNELPL-------------------------------KDKVAWT 154
I Y G++E A LF+E+P KD V WT
Sbjct: 182 IAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWT 241
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV------C 208
+M++ YVQN P +A++ F M G+ D +V V+SA A LG ++ W+
Sbjct: 242 SMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMN 301
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
+I SGF +GSALIDMYSKCG I++AY +F + +RN+ ++SMI G A+HG
Sbjct: 302 KIELSSGF-------IGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG 354
Query: 268 RAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHY 315
A A+ +F +M + + +PN +TF+G+L+ CSH GL + Y + P HY
Sbjct: 355 LAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHY 414
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEP 375
CM+DL GRAG LE+AL +++ MP E + W A+L A H + EI + AA EL P
Sbjct: 415 GCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAP 474
Query: 376 DKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAG-DLT 434
D +Y++LSNIYA AG WDDV+++R +++ G+KK G S + B G +HEF G +L
Sbjct: 475 DDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVB-GKVHEFLXGKELD 533
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTS 494
S ++ + +++ RL+ GY+P+L VL D+ DE K+ +L HSEK+A AFGL+ +
Sbjct: 534 SSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAXAFGLIHIN 593
Query: 495 PGATVRIMKNLRICEDCHLFMCG 517
A + I+KNLRI + F G
Sbjct: 594 KSAPIHIVKNLRIVDATQKFKVG 616
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 136/334 (40%), Gaps = 78/334 (23%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSW---TELIVAYAN----NGDMESAGGLFNE 144
N ++ + KC L R++ +M + ++++ ++A+ + +G ++ A +F+
Sbjct: 7 NPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSR 66
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-----QYAGVETDYVTLVGVISACAQL- 198
+ + + A++ G+ + P E++ + RM +GVE ++ V+ AC +L
Sbjct: 67 IQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLL 123
Query: 199 ----------GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V+K W F P VG++++ MY G I+ A R+F M
Sbjct: 124 AFDEGRQVHGQVLKTHLW---------FDPF----VGNSMVRMYIDFGEIELARRVFDRM 170
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGV 308
R+V S++SMI G+ G A +LF +M
Sbjct: 171 PNRDVVSWNSMIAGYLKAGEIELASELFDEM----------------------------- 201
Query: 309 SPSTDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
P D +C M+D G+ G E A K+ E M + + W +++ A +R P A
Sbjct: 202 -PERDLVSCNAMIDGYGKCGRCELAEKVFETMS-DKDVVTWTSMISAYVQNRCPMKALDL 259
Query: 367 ANHLFE--LEPDKIGNYIILSNI----YASAGMW 394
+ L PD +LS I + G W
Sbjct: 260 FREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKW 293
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 312/556 (56%), Gaps = 51/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGI--GPVSFTLSALFKACTEV 65
+F+++ +N WT++I G G ++++ L+ M G+ P S T + AC
Sbjct: 141 LFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANA 200
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G QIHA LG ++ D Y+ L
Sbjct: 201 SALYQGVQIHAHVFKLG-YSFDAYIS-------------------------------AAL 228
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YAN ME + +F+ + V WTA+VTGY N K +A++ F M GV +
Sbjct: 229 ITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQ 288
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ +++C L + +W EI + G +V VG++LI MY +CG+++D I
Sbjct: 289 SSFTSALNSCCGLEAL---DWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVI 345
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + ++N+ S++S+I+G A HG A+ F MV++ +P+ +TF G+L+ACSH G+
Sbjct: 346 FKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMS 405
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G DHYACMVD+LGR+G LEEA +++ MPV+ N VW LL
Sbjct: 406 QKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 465
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC +H E+A+ AA + +LEP Y++LSN+YASA W DVSR+RR +K G+ K
Sbjct: 466 ACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQ 525
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+ +G +EF +GD +HP+S I Q L L +L+ GY P+ R L+DV DE+
Sbjct: 526 PGRSWIT-IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQ 584
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSE+LA+ FGL++T G+T+ +MKNLR+C DCH + ++++ R+I+VRD+
Sbjct: 585 KEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDST 644
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF DG+CSCG+YW
Sbjct: 645 RFHHFMDGRCSCGDYW 660
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 185/390 (47%), Gaps = 31/390 (7%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS--ALFKACT 63
R VF++V + + +L+T +I GY ++ L+ M PV +S ++ K C
Sbjct: 15 RTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM------PVKDVVSWNSMIKGCF 68
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ D+++ +++ + + TMI +++ G + + +F +MP RD+ +W
Sbjct: 69 DCADLTMARKLFDEMP-----ERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWN 123
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y NG +E LF E+P ++ ++WT+M+ G Q+ + EA+ F +M GVE
Sbjct: 124 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 183
Query: 184 DYV--TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T VI+ACA + V A G + + +ALI Y+ C ++D+
Sbjct: 184 KPTSSTYCCVITACANASALYQG--VQIHAHVFKLGYSFDAYISAALITFYANCKQMEDS 241
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F G NV +++++ G+ ++ + A+++FG+M++ PN +F L +C +
Sbjct: 242 LRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGL 301
Query: 302 GLKCYG---------VSPSTDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
+G + TD + ++ + R G L + + + +++ + N W ++
Sbjct: 302 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSV 360
Query: 351 LGACQIHRNPEIAQIAANHLFE--LEPDKI 378
+ C H A N + +EPD+I
Sbjct: 361 IVGCAQHGCGMWALAFFNQMVRSMVEPDEI 390
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 26/259 (10%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R VFD++ DV +T +I YA N + A LF E+P+KD V+W +M+ G A
Sbjct: 14 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADL 73
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG-PINNVVVG 225
A + F+ M E V+ +I+ Q G I E+AEG + P ++
Sbjct: 74 TMARKLFDEMP----ERSVVSWTTMINGFLQFGKI-------EVAEGLFYKMPFRDIAAW 122
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTE 283
+++I Y G ++D R+F M RNV S++SMI G HGR+ A+ LF M+ E
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 284 TKPNGVTFIGVLTACSHVGLKCYGVSP---------STDHY--ACMVDLLGRAGCLEEAL 332
KP T+ V+TAC++ GV S D Y A ++ +E++L
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 333 KMVEKMPVEPNGGVWGALL 351
++ + N +W AL+
Sbjct: 243 RVFHG-KLHMNVVIWTALV 260
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 307/555 (55%), Gaps = 46/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+Q+ + W ++I Y + + M+ G P TL +L +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D + +H + G D+ +GN ++ MY K G L
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL--------------------- 469
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETD 184
+SA +F + +KD ++W ++TGY QN EAIE ++ M+ + +
Sbjct: 470 ----------DSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V ++ A A +G ++ + + +V V + LID+Y KCG + DA +
Sbjct: 520 QGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSL 577
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-- 302
F + Q + +++++I +HG A ++LFG+M+ KP+ VTF+ +L+ACSH G
Sbjct: 578 FYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFV 637
Query: 303 ---------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
++ YG+ PS HY CMVDLLGRAG LE A ++ MP++P+ +WGALLGA
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGA 697
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C+IH N E+ + A++ LFE++ +G Y++LSNIYA+ G W+ V +VR L + GLKK P
Sbjct: 698 CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 757
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G+S +E +R V F G+ +HP EI + L L ++++ GY P+ VL DV ++EK
Sbjct: 758 GWSTIEVNRKV-DVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEK 816
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ IL +HSE+LA+AFG+++T P + +RI KNLR+C DCH S++ REIVVRD+ R
Sbjct: 817 EHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNR 876
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSCG+YW
Sbjct: 877 FHHFKDGICSCGDYW 891
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 207/421 (49%), Gaps = 49/421 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+ + +++ W A+I G I G+ ++ + MR EGI T+ ++ C ++
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+S IH ++ G DL+V N +I MY K G
Sbjct: 330 GDISTAMLIHLY-VIKHGLEFDLFVSNALINMYAKFG----------------------- 365
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E A F ++ + D V+W +++ Y QN P A +F +MQ G + D
Sbjct: 366 --------NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+TLV + S AQ K + V G+ + +VV+G+A++DMY+K G +D A+++F
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGW-LMEDVVIGNAVVDMYAKLGLLDSAHKVF 476
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK-TETKPNGVTFIGVLTACSHV--- 301
+ ++V S++++I G+A +G A AI+++ M + E PN T++ +L A +HV
Sbjct: 477 EIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536
Query: 302 --GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G++ +G T+ + C++D+ G+ G L +A+ + ++P E + W A++
Sbjct: 537 QQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISC 595
Query: 354 CQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
IH + E + + ++PD + ++ L + + +G ++ RL++ G+K
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHV-TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 654
Query: 412 N 412
+
Sbjct: 655 S 655
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 42/295 (14%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSIS-LYCSMRREGIGPVSFTLSALFKA 61
S R F+Q+ K+ + W ++I Y+ GH ++I Y + I P +T + KA
Sbjct: 168 SLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA 227
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++D G++IH LG F +++V ++I MY + GF G +R +FD+
Sbjct: 228 CGTLVD---GRRIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGIARSLFDD-------- 275
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+P +D +W AM++G +QN +A++ + M+ G+
Sbjct: 276 -----------------------MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 182 ETDYVTLVGVISACAQLGVIKYANWV--CEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ ++VT+V ++ C QLG I A + I G F ++ V +ALI+MY+K G+++
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF----DLFVSNALINMYAKFGNLE 368
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
DA + F M +V S++S+I + + A F M +P+ +T + +
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE-YFERMQYAGV 181
T L+ YAN GD+ + F+++P KD W +M++ YV N EAI +++ + + +
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 182 ETDYVTLVGVISACAQLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D+ T V+ AC L + + W ++ GF NV V ++LI MYS+ G
Sbjct: 215 RPDFYTFPPVLKACGTLVDGRRIHCWAFKL----GFQ--WNVFVAASLIHMYSRFGFTGI 268
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M R++ S+++MI G +G A A+ + +M K N VT + +L C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 301 VG-------LKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+G + Y + + ++++ + G LE+A K ++M + + W +
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNS 387
Query: 350 LLGACQIHRNPEIAQ 364
++ A + + +P A
Sbjct: 388 IIAAYEQNDDPVTAH 402
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G + ++ + + L+++Y+ G + + F + Q++V++++SMI + +G H AI F
Sbjct: 146 GKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCF 205
Query: 277 GD-MVKTETKPNGVTFIGVLTACSHV----GLKCY----GVSPSTDHYACMVDLLGRAGC 327
++ +E +P+ TF VL AC + + C+ G + A ++ + R G
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIG-NYIILSN 386
A + + MP + G W A++ + +N AQ A + L E+ + I N++ + +
Sbjct: 266 TGIARSLFDDMPFR-DMGSWNAMISG--LIQNGNAAQ-ALDVLDEMRLEGIKMNFVTVVS 321
Query: 387 IYASAGMWDDVSR--------VRRLLKMTGLKKN------PGYSWLEGDRGVIHEFRAGD 432
I D+S ++ L+ N + LE R + D
Sbjct: 322 ILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD 381
Query: 433 LTHPNSTEIQQALGD-------LLDRLQADGYQPNLRSVL 465
+ NS D ++Q +G+QP+L +++
Sbjct: 382 VVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLV 421
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 309/558 (55%), Gaps = 58/558 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE+ + K+ W+++I + +I +C M E + P + KAC +
Sbjct: 111 VFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGR 170
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G+ +H ++ G+ D++VG++++ MY KC
Sbjct: 171 CDVGKSVHC-LVIKTGYDVDVFVGSSLVDMYAKC-------------------------- 203
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
GD++ A +F+E+P ++ V+W+ M+ GY Q + EA+ F+ G++ + T
Sbjct: 204 -----GDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFT 258
Query: 188 LVGVISACAQLGVIKYANWVCEIA-----EGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
L VI C +++ + + + SGF VGS+LI +YSKCG I+ AY
Sbjct: 259 LSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGF-------VGSSLISLYSKCGLIEGAY 311
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F + +N+ +++M++ A H A LF M +PN +TF+ VL ACSH G
Sbjct: 312 RVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAG 371
Query: 303 L-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L K Y + P T HYA MVDLLGRAG L+EAL +++ MP EP VWGA +
Sbjct: 372 LVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFI 431
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
C+IH N ++A AA+ +FEL G +++LSN YA+AG ++D ++ R++L+ G+KK
Sbjct: 432 TGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKK 491
Query: 412 NPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
G SW+E G+R +H+F AGD H EI Q L DL + ++ GY + VL +V
Sbjct: 492 ETGLSWIEEGNR--VHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGS 549
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK + + HSE+LA+AFGL++ G +RIMKNLR+C DCH + S++ GR I+VRD
Sbjct: 550 EEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRD 609
Query: 531 NMRFHHFQDGKCSCGNYW 548
N RFH F+DGKCSC +YW
Sbjct: 610 NNRFHRFEDGKCSCADYW 627
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 133/278 (47%), Gaps = 43/278 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ ++N W+ +I GY G ++++ L+ EG+ FTLS++ + C
Sbjct: 210 RNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSA 269
Query: 66 LDVSLGQQIHAQTILLGGFTSDL--YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ LG+QIH L + DL +VG+++I +Y KCG + + +VFDE+P +++ W
Sbjct: 270 TLLELGKQIHG---LCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWN 326
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+++A A Q+A +EA + F +M+ AG+
Sbjct: 327 AMLIACA-------------------------------QHAHTKEAFDLFTKMENAGMRP 355
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+++T + V+ AC+ G+++ + + P ++++D+ + G + +A
Sbjct: 356 NFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHY--ASMVDLLGRAGKLQEALS 413
Query: 244 IFVGMKQRNVFS-YSSMILGFAMHGR----AHAAIQLF 276
+ GM S + + I G +HG A AA ++F
Sbjct: 414 VIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVF 451
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 228 LIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
LI+ YSK + ++F ++++ ++SS+I FA + AIQ F M+ P+
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPD 154
Query: 288 GVTFIGVLTACSHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVE 336
F AC+ +G + C + D + +VD+ + G ++EA + +
Sbjct: 155 DHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFD 214
Query: 337 KMPVEPNGGVW-GALLGACQIHRNPEIAQIAANHLFE 372
+MP N W G + G Q+ + E ++ L E
Sbjct: 215 EMP-HRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLE 250
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/566 (35%), Positives = 313/566 (55%), Gaps = 55/566 (9%)
Query: 3 SFPRLVFEQVKYKNPFLW-TALIRGYI-------LQGHLKDSISLYCSMRREGIGPVSFT 54
S+ R VF+++ +W L+RGY + +++ ++ M EG+ P ++T
Sbjct: 85 SYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYT 144
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+L KAC G+Q H + +G + YV T+I MY +CG
Sbjct: 145 FVSLLKACAAARAGEEGRQAHGVAVKVGAAEHE-YVLPTLINMYAECG------------ 191
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
D +A +F + + V++ AM+T V++++P EA+ F
Sbjct: 192 -------------------DARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFR 232
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
MQ G++ VTL+ V+SACA LG ++ W+ E + V V +ALIDMY K
Sbjct: 233 EMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSL--VKVNTALIDMYGK 290
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CGS++DA +F GM+ R+ ++S MI+ +A H AI LF +M K KP+ VTF+GV
Sbjct: 291 CGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGV 350
Query: 295 LTACSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
L ACSH GL + +G+ P HY C+ DLL R+G L+ A + ++++P++P
Sbjct: 351 LYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPT 410
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+W LL AC + ++ + + EL+ G+Y+I SN+ A+ G W++++RVR+L
Sbjct: 411 AILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKL 470
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
+ G+ K PG S +E D V HEF AGD HP S + ++ + ++++L+ GY PN
Sbjct: 471 MNEKGVVKVPGCSSIEVDNRV-HEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSH 529
Query: 464 VLY-DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVI 522
V + ++ +EEK L HSEKLA++FGLL TSPG T+R++KNLR+C DCH S V
Sbjct: 530 VFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVF 589
Query: 523 GREIVVRDNMRFHHFQDGKCSCGNYW 548
R I++RD RFHHF+DG CSCG+YW
Sbjct: 590 NRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 130 ANNGDMESAGGLFNELPLKDKVAW-TAMVTGYVQ-----NAKP--REAIEYFERMQYAGV 181
A + A +F+ +P V W ++ GY + A+P EA F RM GV
Sbjct: 79 AKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGV 138
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D T V ++ ACA + +A G + V LI+MY++CG A
Sbjct: 139 APDTYTFVSLLKACAAARAGEEGRQAHGVA--VKVGAAEHEYVLPTLINMYAECGDARAA 196
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+F + V SY++MI R A+ LF +M K VT I VL+AC+ +
Sbjct: 197 RTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALL 256
Query: 302 G-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
G ++ + ++D+ G+ G LE+A+ + + M
Sbjct: 257 GALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGM 304
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 307/556 (55%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ F + +IRG + L++++ LY M GI P +FT + KAC+ ++
Sbjct: 87 IFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVA 146
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIHA + G D++V N +I MY KC
Sbjct: 147 LKEGVQIHAH-VFKAGLEVDVFVQNGLISMYGKC-------------------------- 179
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYV 186
G +E AG +F ++ K +W++++ + E + M G +
Sbjct: 180 -----GAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEES 234
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAYRI 244
LV +SAC LG + G I+ NVVV ++LIDMY KCGS++ +
Sbjct: 235 ILVSALSACTHLGSPNLGRCI----HGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCV 290
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +N +SY+ MI G A+HGR A+++F DM++ P+ V ++GVL+ACSH GL
Sbjct: 291 FQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLV 350
Query: 304 ----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+C+ + P+ HY CMVDL+GRAG L+EA +++ MP++PN VW +LL
Sbjct: 351 NEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLS 410
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N EI +IAA ++F L G+Y++L+N+YA A W +V+R+R + L +
Sbjct: 411 ACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQT 470
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E +R V ++F + D + P I + + +L+ +GY P++ VL DV ++E
Sbjct: 471 PGFSLVEANRNV-YKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDE 529
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HS+KLA+AF L+ TS G+ +RI +NLR+C DCH + S + REI VRD
Sbjct: 530 KRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIYEREITVRDRN 589
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 590 RFHHFKDGTCSCKDYW 605
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 17/260 (6%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G ME A +F+++ + M+ G V + EA+ + M G+E D T V+
Sbjct: 79 GSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVL 138
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
AC+ L +K + +G +V V + LI MY KCG+I+ A +F M +++
Sbjct: 139 KACSLLVALKEGVQIHAHVFKAGLEV--DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKS 196
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGL----KC-Y 306
V S+SS+I A H + L GDM + + + L+AC+H+G +C +
Sbjct: 197 VASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIH 256
Query: 307 GV------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH-RN 359
G+ + ++D+ + G LE+ L + + M N + ++ IH R
Sbjct: 257 GILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNM-AHKNRYSYTVMIAGLAIHGRG 315
Query: 360 PEIAQIAANHLFE-LEPDKI 378
E ++ ++ L E L PD +
Sbjct: 316 REAVRVFSDMLEEGLTPDDV 335
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTE 64
+VFEQ+ K+ W+++I + + + L M EG S +SAL ACT
Sbjct: 187 VVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSAL-SACTH 245
Query: 65 VLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +LG+ IH ILL + ++ V ++I MYVKCG L VF M ++
Sbjct: 246 LGSPNLGRCIHG--ILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKN----- 298
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ ++T M+ G + + REA+ F M G+
Sbjct: 299 --------------------------RYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTP 332
Query: 184 DYVTLVGVISACAQLGVI 201
D V VGV+SAC+ G++
Sbjct: 333 DDVVYVGVLSACSHAGLV 350
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+N+V AL S+ GS++ A IF +++ F Y++MI G A+ L+ +M
Sbjct: 67 SNLVASCAL----SRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEM 122
Query: 280 VKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCL 328
++ +P+ T+ VL ACS H + G+ ++ + G+ G +
Sbjct: 123 LERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAI 182
Query: 329 EEALKMVEKMPVEPNGGVWGALLGA 353
E A + E+M E + W +++GA
Sbjct: 183 EHAGVVFEQMD-EKSVASWSSIIGA 206
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/557 (36%), Positives = 322/557 (57%), Gaps = 49/557 (8%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
RLV +QV K+ L+TALI GY G +S+ ++ +M ++GI +TLS++ C
Sbjct: 231 ARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 290
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D++ G+ IH I+ G S + +++ MY +CG + S KV
Sbjct: 291 LEDLTSGRLIHG-LIVKAGLESAVASQTSLLTMYYRCGLVDDSLKV-------------- 335
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
F + ++V WT+++ G VQN + A+ F +M + + +
Sbjct: 336 -----------------FKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPN 378
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+ AC+ L +++ + I FG + VG+ALID Y KCGS + A +
Sbjct: 379 SFTLSSVLRACSSLAMLEQGKQIHAIV--MKFGLDIDKYVGAALIDFYGKCGSTEIARSV 436
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F G+ + +V S +SMI +A +G H A+QLF M T +PN VT++GVL+AC++ GL
Sbjct: 437 FNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLL 496
Query: 304 --KCY---------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
C+ + + DHYACMVDLLGRAG L+EA ++ ++ + + +W LL
Sbjct: 497 EEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLS 555
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH + E+A+ N + +L P+ G +++LSN+YAS G W V ++ ++ LKKN
Sbjct: 556 ACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKN 615
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
P SW++ +R IH F AGD +HPN +I++ L +L+++++ GY P+ R VL D+ +E+
Sbjct: 616 PAMSWVDVERE-IHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEK 674
Query: 473 KKRILMTHSEKLALAFGLLTTS-PGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
K R L HSEKLA+AF L ++ T+RI+KNLR+C DCH +M S+++GR+I+ RD
Sbjct: 675 KIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDV 734
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF++G CSCG+YW
Sbjct: 735 KRFHHFRNGLCSCGDYW 751
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 179/397 (45%), Gaps = 78/397 (19%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VF++V +++ W ++I YI G K++I +Y M +GI P FT S++FKA +
Sbjct: 128 YARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFS 187
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ V GQ+ H Q+++LG S+++VG+ ++ MY K G + +R V D++ +DVV +T
Sbjct: 188 DLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFT 247
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
LIV Y+++G+ E+++ F M G+E
Sbjct: 248 ALIVGYSHHGE-------------------------------DGESLQVFRNMTKKGIEA 276
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ TL V+ C L + + + +G + V ++L+ MY +CG +DD+ +
Sbjct: 277 NEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE--SAVASQTSLLTMYYRCGLVDDSLK 334
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+F N +++S+I+G +GR A+ F M+++ PN T VL ACS + +
Sbjct: 335 VFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 394
Query: 304 KCYG---------VSPSTDHY--ACMVDLLGRAGCLE----------------------- 329
G D Y A ++D G+ G E
Sbjct: 395 LEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYS 454
Query: 330 --------EALKMVEKMP---VEPNGGVWGALLGACQ 355
EAL++ M +EPN W +L AC
Sbjct: 455 YAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACN 491
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 156/339 (46%), Gaps = 62/339 (18%)
Query: 36 SISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMI 95
S LY S+ ++ IG K+ T++ + Q HA L GF L GN +I
Sbjct: 76 STKLYSSLIQQCIG---------IKSITDITKI----QSHA---LKRGFHHSL--GNKLI 117
Query: 96 GMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTA 155
Y+KCG + +RKVF +E+P + VAW +
Sbjct: 118 DAYLKCGSVVYARKVF-------------------------------DEVPHRHIVAWNS 146
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M+ Y++N + +EAI+ ++RM G+ D T V A + LG++ + G
Sbjct: 147 MIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLG 206
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
G ++NV VGSAL+DMY+K G + DA + + ++V ++++I+G++ HG ++Q+
Sbjct: 207 VG-VSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQV 265
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHV----------GLKCY-GVSPSTDHYACMVDLLGR 324
F +M K + N T VL C ++ GL G+ + ++ + R
Sbjct: 266 FRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYR 325
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
G ++++LK V K + PN W +++ + EIA
Sbjct: 326 CGLVDDSLK-VFKQFINPNQVTWTSVIVGLVQNGREEIA 363
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/483 (38%), Positives = 290/483 (60%), Gaps = 33/483 (6%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM---RREGIGPVSFTLSALF 59
S+ L+F+Q+ + N F + A+IR Y H +IS++ M + P FT +
Sbjct: 59 SYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVI 118
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLY--VGNTMIGMYVKCGFLGCSRKVFDEMPER 117
K+CT +L LG Q+H L+ F +D + N +I MY K G L + KVF+EM R
Sbjct: 119 KSCTGILCHRLGMQVHG---LVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHR 175
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV+SW LI Y G M SA LF+++P++ V+WT M+TGY + +A++ F MQ
Sbjct: 176 DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQ 235
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G+E D ++++ V+ ACAQLG ++ W+ A+ +GF + + +ALI+MY+KCG
Sbjct: 236 MVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGF--LRKTGICNALIEMYAKCGC 293
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
ID+A+ +F + +++V S+S+MI G A HG+ + AIQLF +M K PN +TF+GVL A
Sbjct: 294 IDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLA 353
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
CSH GL Y + P +HY C++DLLGR+GCL +AL + KMP++P+
Sbjct: 354 CSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSR 413
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
+W +LL +C+IHRN +IA IA L ELEP++ GNY++L+N+YA G W+DVS +R+L++
Sbjct: 414 IWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIR 473
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEI----------QQALGDLLDRLQAD 455
+KK PG S +E + V+ EF + D + P S E+ Q DL++ ++ D
Sbjct: 474 NKRIKKTPGSSSIEVN-NVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTNDLMEPVEED 532
Query: 456 GYQ 458
++
Sbjct: 533 KHE 535
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 307/554 (55%), Gaps = 47/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ +++ W+A++ Y GH ++++ L+ M +G+ P TL + AC + D
Sbjct: 133 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 192
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +H Q + G S + VG ++ +Y KCG
Sbjct: 193 LRSGALMH-QRVEAQGIQSGVVVGTALVNLYGKCG------------------------- 226
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E+A F ++ K+ VAW+A+ Y +N + R+AI RM G+ + T
Sbjct: 227 ------RIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTT 280
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V V+ ACA + +K + E G G ++V V +AL++MYSKCG++ A +F
Sbjct: 281 FVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDK 340
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++ ++S+I A HG+ A++LF M +P +TF VL ACSH G+
Sbjct: 341 IAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 400
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+G+ P +H+ CMVDLLGRAG + ++ ++ MP EP+ W A LGAC+
Sbjct: 401 RKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 460
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+RN + A AA +LF+L+P K Y++LSN+YA AG W DV+R+R+ +++ K G
Sbjct: 461 TYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGR 520
Query: 416 SWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E DR +HEF +GDL HP EI L L ++A GY P+ VL+DV E K+
Sbjct: 521 SWIEVKDR--VHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKE 578
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
++ HSEKLA+AF LLTT G+ +R++KNLR+C DCH S+++ REIVVRD RF
Sbjct: 579 TMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRF 638
Query: 535 HHFQDGKCSCGNYW 548
H FQ+G CSCG+YW
Sbjct: 639 HRFQNGACSCGDYW 652
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ KN F WT ++ + + M +GI P +S ACT+ +
Sbjct: 32 VFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDARE 91
Query: 68 VSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+++G+ I Q +LG G + V ++ +Y K G + VF M R
Sbjct: 92 ITIGRSI--QLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHR--------- 140
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D VAW+AMV Y +N PREA+ F +M GV + V
Sbjct: 141 ----------------------DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKV 178
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TLV + ACA LG ++ + + E G + VVVG+AL+++Y KCG I+ A F
Sbjct: 179 TLVSGLDACASLGDLRSGALMHQRVEAQGIQ--SGVVVGTALVNLYGKCGRIEAAAEAFG 236
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------- 299
+ ++NV ++S++ +A + R AI++ M PN TF+ VL AC+
Sbjct: 237 QIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQ 296
Query: 300 ----HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H + G +D Y +V++ + G L A M +K+ + +W +L+
Sbjct: 297 GRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKI-AHLDLVLWNSLIAT 355
Query: 354 CQIHRNPEIA 363
H E A
Sbjct: 356 NAQHGQTEKA 365
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
G I N + + LID+Y+KC DDA +F G++ +NVFS++ M+ FA +
Sbjct: 4 LGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLF 63
Query: 276 FGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGR 324
F M+ P V L+AC+ + + G+ + +V L G+
Sbjct: 64 FRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK 123
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIA 363
G +A + +M + W A++ A + +P A
Sbjct: 124 LGHCTDAASVFLRMS-HRDVVAWSAMVAAYARNGHPREA 161
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 312/552 (56%), Gaps = 34/552 (6%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++P +F + + F L+R +L L ++L+ RR P SFT L +
Sbjct: 96 AYPLALFRRANSTSAFASNNLLR--VLPHPL--PLTLFSRFRRRN--PHSFTF--LLASI 147
Query: 63 TEVLDVS---------LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
+ L+ + LG +HA + G DL+V N ++ Y G +G R+VFDE
Sbjct: 148 SNHLNAAGPSASACSFLGSHVHALAVKAGA-AGDLFVRNALVHFYGVSGDVGAMRRVFDE 206
Query: 114 MPE-RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P RDV++W E++ Y G M A +F+E+P++D+++W+ +V GYV+ + A+
Sbjct: 207 LPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGV 266
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M GV + +V +SA A+LG++++ +V + + SG NV G+AL+DMY
Sbjct: 267 FRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNV--GAALVDMY 324
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG + A +F GM++R+VF++++MI G A HG A++LF + P VTF+
Sbjct: 325 AKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFV 384
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL CS GL + Y + P +HY CMVDLLGRAG + EA++++E M +
Sbjct: 385 GVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHI 444
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
P+ +WG +L +C+ H ++ N L EL+P G Y++LS IYA A WD+V V
Sbjct: 445 APDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREV 504
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R+L+ G K+ G+S +E G +H+F GD H +S +I L + RL GY P+
Sbjct: 505 RKLMSSRGTNKSAGWSLMEA-HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ SVL+D+ +EEK + HSE+LA+A+G + G+ +RI+KNLR+C DCH F +
Sbjct: 564 VSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTM 623
Query: 521 VIGREIVVRDNM 532
V REI+VRD +
Sbjct: 624 VFQREIIVRDGI 635
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 67/309 (21%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M + R VF+++ ++ W+ L+ GY+ + L+ ++ ++ +M +G+ P +
Sbjct: 228 MMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALS 287
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + + G+ +H + G + VG ++ MY KCG + +R+VFD M RDV
Sbjct: 288 AAARLGLLEHGKFVH-NVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVF 346
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W AM+ G + R+A+E FER G
Sbjct: 347 AW-------------------------------NAMICGLAAHGLGRDAVELFERFISEG 375
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ VT VGV++ C++ G+ +AEG + + I +
Sbjct: 376 LSPTNVTFVGVLNGCSRSGL---------VAEGRRYFKL------------------IVE 408
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
YRI M+ Y M+ G AI+L M P+ V + +L++C
Sbjct: 409 KYRIEPEMEH-----YGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCKT 460
Query: 301 VGLKCYGVS 309
GL GVS
Sbjct: 461 HGLVDLGVS 469
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 310/555 (55%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+Q++ N W ++I Y+ D++ L+ +M+++GI P + ACT
Sbjct: 417 RTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-- 474
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+G H +T ++ V+ LG S V T L
Sbjct: 475 ----IGS--HGRT-------------RKLVHQCVEESGLGGSPLV-----------QTSL 504
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA G+++ A + E+ + AW ++ GY + + REA+E ++++Q + D
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDK 564
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + V++AC + + A G ++V+V +AL +MYSKCGS+++A RIF
Sbjct: 565 VTFISVLNACTSSTSLAEGKMIHSNAVECGLD--SDVIVKNALTNMYSKCGSMENARRIF 622
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M R+ S++ M+ +A HG + ++L M + K NG+TF+ VL++CSH GL
Sbjct: 623 DSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIA 682
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G+ T+HY C+VDLLGRAG L+EA K + KMP+EP W +LLGA
Sbjct: 683 EGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ ++ + ++AA L EL+P ++LSNIY+ G W + +++RR + +KK P
Sbjct: 743 CRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVP 802
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G S ++ + +HEFR D +HP + EI + +L ++ GY P+ + VL+DV +E+K
Sbjct: 803 GISSIQV-KNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQK 861
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFGL++T +++ I KNLR+CEDCH S++ GREIVVRDN R
Sbjct: 862 ESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHR 921
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+DG CSC +YW
Sbjct: 922 FHHFRDGSCSCKDYW 936
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 195/415 (46%), Gaps = 50/415 (12%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F +++ +N W +I Y +++++L+ +M EG+ P + TL A+ +C ++
Sbjct: 15 FGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFREL 74
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G +HA ++ G F + L V ++ MY KCG L ++ VF+EM E++VV+W ++
Sbjct: 75 RDGILVHALSLERGFFQNTL-VATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGV 133
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y+ G W + A+E F RM GV+ + +T
Sbjct: 134 YSLQG-----------------CCW-------------KLAVELFTRMLLEGVKANVITF 163
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+ V+++ ++ ++ S +V V +AL++ Y+KCGS+ DA ++F GM
Sbjct: 164 LNVLNSVVDPDALRKGKFIHSCVRESEHSL--DVFVNTALVNTYTKCGSLTDARKVFDGM 221
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC---------S 299
R+V +++SMI +++ R+ A +F M + + + VTF+ +L AC
Sbjct: 222 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGK 281
Query: 300 HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
HV S D + ++ + R E+A ++ +M + N W A++ A H
Sbjct: 282 HVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADH 340
Query: 358 RNPEIAQIAANHLFELE---PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
+ A + + + E P+++ +I L N + + +++SR+ L+ GL
Sbjct: 341 GHCGEA-LRYFRMMQQEGILPNRV-TFISLLNGFTTPSGLEELSRIHLLITEHGL 393
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 179/391 (45%), Gaps = 49/391 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
VFE++ KN W A++ Y LQG K ++ L+ M EG+ T + + +
Sbjct: 115 VFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPD 174
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ G+ IH+ + + D++V ++ Y KCG
Sbjct: 175 ALRKGKFIHS-CVRESEHSLDVFVNTALVNTYTKCG------------------------ 209
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ A +F+ +P + W +M++ Y + + EA F+RMQ G D V
Sbjct: 210 -------SLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRV 262
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T + ++ AC +++ V E + F ++ VG+ALI MY++C S +DA ++F
Sbjct: 263 TFLSILDACVNPETLQHGKHVRESISETSFEL--DLFVGTALITMYARCRSPEDAAQVFG 320
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------- 299
MKQ N+ ++S++I FA HG A++ F M + PN VTFI +L +
Sbjct: 321 RMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 380
Query: 300 ----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA-C 354
H+ + +G+ +T +V++ GR ++A + +++ + PN W +++G
Sbjct: 381 LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSMIGIYV 439
Query: 355 QIHRNPEIAQIAANHLFE-LEPDKIGNYIIL 384
Q R+ + Q+ + ++PD++ IL
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTIL 470
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 162/365 (44%), Gaps = 46/365 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++K N W+A+I + GH +++ + M++EGI P T +L T
Sbjct: 318 VFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 377
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +IH I G + N ++ +Y +C +R VFD++
Sbjct: 378 LEELSRIHL-LITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL------------- 423
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
ELP + ++W +M+ YVQ + +A++ F MQ G++ D V
Sbjct: 424 ----------------ELP--NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVN 465
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ AC + V + E SG G + +V ++L++MY+K G +D A I
Sbjct: 466 FMTILGACTIGSHGRTRKLVHQCVEESGLG--GSPLVQTSLVNMYAKAGELDVAEVILQE 523
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M ++ + +++ +I G+A+HGR+ A++ + + + VTFI VL AC+ G
Sbjct: 524 MDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG 583
Query: 308 VSPSTDHYACMVD-----------LLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
++ C +D + + G +E A ++ + MP+ + W +L A
Sbjct: 584 KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQ 642
Query: 357 HRNPE 361
H E
Sbjct: 643 HGESE 647
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 173/401 (43%), Gaps = 48/401 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W ++I Y + ++ ++ M++EG T ++ AC
Sbjct: 215 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNP 274
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+ + ++I F DL+VG +I MY +C PE
Sbjct: 275 ETLQHGKHVR-ESISETSFELDLFVGTALITMYARC-----------RSPE--------- 313
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A +F + + + W+A++T + + EA+ YF MQ G+ +
Sbjct: 314 -----------DAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNR 362
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT + +++ ++ + + + G + + +AL+++Y +C S DDA +F
Sbjct: 363 VTFISLLNGFTTPSGLEELSRIHLLITEHGLD--DTTTMRNALVNVYGRCESPDDARTVF 420
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
++ N+ S++SMI + R A+QLF M + +P+ V F+ +L AC+
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGR 480
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H ++ G+ S +V++ +AG L+ A ++++M E W L+
Sbjct: 481 TRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGY 539
Query: 355 QIH-RNPEIAQIAANHLFELEP-DKIGNYIILSNIYASAGM 393
+H R+ E + E P DK+ +L+ +S +
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSL 580
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
Y+ G + A F ++ ++ V+W M++ Y +EA+ F M GV + +TL
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V V+++C ++ V ++ GF N +V +AL++MY KCG++ DA +F M
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGF--FQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 249 KQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTETKPNGVTFIGVLTACS-----HVG 302
++NV ++++M+ +++ G A++LF M+ K N +TF+ VL + G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 303 LKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
+ ++H +V+ + G L +A K+ + MP + G W +++ A I
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSMISAYSI 238
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MYS+CGS+ DA F ++ RNV S++ MI ++ + A+ LF M+ PN +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 291 FIGVLTACSHV-----GLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMP 339
+ VL +C G+ + +S + ++++ G+ G L +A + E+M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM- 119
Query: 340 VEPNGGVWGALLG 352
E N W A+LG
Sbjct: 120 AEKNVVTWNAMLG 132
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 303/530 (57%), Gaps = 55/530 (10%)
Query: 35 DSISLYCSMRREGIGPVSFTLSALFKA-CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
D++ C +R G +FTL+ L K C+ ++ +Q+HA + G
Sbjct: 121 DALRFLCRVRALGRRGNAFTLAILLKPRCS----LAHARQLHANVVAEGHL--------- 167
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
RD + T L+ YAN GD + A LF+E+P++D VAW
Sbjct: 168 -----------------------RDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAW 204
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVET--DYVTLVGVISACAQLGVIKYANWVCEIA 211
++T Y +N + ++A++ FE M+ E+ D VT + ++ AC+ LG + + V A
Sbjct: 205 NVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYA 264
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E G+G + V ++LI MY +CG +D AYR+F G Q++V ++++MI G A +G +
Sbjct: 265 EEHGYG--GELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGND 322
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----------KC-YGVSPSTDHYACMV 319
AI +F +M++++ P+ TF GVL+ACSH GL +C YG+ P+ HY C+V
Sbjct: 323 AISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIV 382
Query: 320 DLLGRAGCLEEALKMV-EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
DL+GRAG L+EA + V +M V P+ +W LLGAC+IH + ++ + +L EL+ +
Sbjct: 383 DLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQA 442
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
G+Y++L N YA+ G W VS +R+L++ G++ PG + +E + G +HEF A D HP
Sbjct: 443 GDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHN-GTVHEFIADDDAHPRK 501
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGAT 498
EI + L ++ +L+ GY PN+ S L+D+ E K+ L HSEKLA+AF LL T
Sbjct: 502 VEIYENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRP 561
Query: 499 VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+R+ KNLR+C DCH F S + R ++VRD RFHHFQ GKCSC +YW
Sbjct: 562 IRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDRTRFHHFQGGKCSCNDYW 611
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 50/307 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACT 63
R +F+++ ++ W LI Y KD++ L+ MR + P T L +AC+
Sbjct: 190 RKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACS 249
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+Q+ A G+ +L V N++I MY++CG + + +VF P++ VV+WT
Sbjct: 250 SLGALDFGEQVWAYA-EEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWT 308
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A NG F +AI FE M + V
Sbjct: 309 AMISGLAANG--------FGN-----------------------DAISVFEEMIRSDVAP 337
Query: 184 DYVTLVGVISACAQLGVIK-----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D T GV+SAC+ G++ + CE +G NV ++D+ + G +
Sbjct: 338 DEQTFTGVLSACSHSGLVDEGFRFFDMMRCE------YGLKPNVRHYGCIVDLMGRAGLL 391
Query: 239 DDAYRIFVGMKQR---NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
D+AY FV + + + + +++ +HG ++ G++++ + + G ++ +L
Sbjct: 392 DEAYE-FVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAG-DYVLLL 449
Query: 296 TACSHVG 302
+ VG
Sbjct: 450 NTYAAVG 456
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 316/558 (56%), Gaps = 56/558 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
V + + +N WTA+I GY ++ L+ M R G P FTL+++ +CT
Sbjct: 92 VLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQG 151
Query: 68 VSLGQ--QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ Q Q+HA I F ++VG++++ MY
Sbjct: 152 IHQHQIKQVHAFAIK-KNFELHMFVGSSLLDMY--------------------------- 183
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A + +++ A +F+ LP +D V++T +++GY + EA+ F ++ G++ +
Sbjct: 184 ----ARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQ 239
Query: 186 VTLVGVISACAQLGVIKYANWVCEI---AEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VT +++A + L + Y V + E F + N +LIDMYSKCG + +
Sbjct: 240 VTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQN-----SLIDMYSKCGKLLYSR 294
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M +R+V S+++M++G+ HG A+ +QLF M + KP+ VT + VL SH G
Sbjct: 295 RVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPDSVTLLAVLLGYSHGG 353
Query: 303 LKCYGVSP------------STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L G+ +T HY C++DLLGR+G LE+AL +++KMP +P +WG+L
Sbjct: 354 LVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSL 413
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++H N + + A LF++EP+ GNY+ILSNIYA+A MW DV R+R+L+ +
Sbjct: 414 LGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKTVI 473
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K PG SW+ D+ VIH F + + HP +I + ++ ++A G+ P+L VL+DV D
Sbjct: 474 KEPGRSWMILDK-VIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDD 532
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
E+K+R+L+ HSEKLA+ FGL++T T+++MKNLRIC DCH F S+V GREI +RD
Sbjct: 533 EQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRD 592
Query: 531 NMRFHHFQDGKCSCGNYW 548
RFH +G C+CG+YW
Sbjct: 593 KNRFHLITEGACTCGDYW 610
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 56/343 (16%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+HA+ + G+ LY+ ++ MY +CG L + V D MPER+VVSWT
Sbjct: 54 GRQVHARMVT-AGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWT------- 105
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
AM++GY QN +P EA + F M AG E + TL
Sbjct: 106 ------------------------AMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLAS 141
Query: 191 VISACA-QLGVIKYANWVCEIAEGSGFGPINN----VVVGSALIDMYSKCGSIDDAYRIF 245
V+++C G+ ++ +I + F N + VGS+L+DMY++ +I +A R+F
Sbjct: 142 VLTSCTGSQGIHQH-----QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVF 196
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+ R+V SY++++ G+ G A+ LF + + N VTF +L A S +
Sbjct: 197 DMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMD 256
Query: 306 YG-------VSPSTDHYAC----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
YG + + ++D+ + G L + ++ + MP E + W A+L
Sbjct: 257 YGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMP-ERSVVSWNAMLMGY 315
Query: 355 QIHRNP-EIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
H E+ Q+ +++PD + +L Y+ G+ D+
Sbjct: 316 GRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLG-YSHGGLVDE 357
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ +T ++ GY G +++++L+ + EG+ T S L A + +
Sbjct: 193 RRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G+Q+H IL + + N++I MY KCG L SR+VFD MPER VVSW +
Sbjct: 253 SSMDYGKQVHG-LILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAM 311
Query: 126 IVAYANNGDMESAGGLFNELPLK---DKVAWTAMVTGYVQNAKPREAIEYFERM 176
++ Y +G LF + K D V A++ GY E ++ F+ +
Sbjct: 312 LMGYGRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHI 365
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
I+ C ++ V +G+ P + + + L+ MY++CG+++DA+ + GM
Sbjct: 40 AAITECVGRRALREGRQVHARMVTAGYRPA--LYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-------- 301
+RNV S+++MI G++ + R A LF M++ +PN T VLT+C+
Sbjct: 98 ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157
Query: 302 -GLKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMP 339
+ + + + + + + ++D+ R+ ++EA ++ + +P
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLP 200
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 299/511 (58%), Gaps = 21/511 (4%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P L + + C D+ + HA+ ++LG T V ++I Y +C +
Sbjct: 68 PDPTVLHRVLERCRVSTDLKTATKTHARVVVLGFATYPSLVA-SLISTYAQCHRPHIALH 126
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VF + D+ S +I + G + A +F ++ ++D V W +M+ GYV+N + +A
Sbjct: 127 VFSRIL--DLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDA 184
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
+ F RM A VE D T V++ACA+LG + A WV + N ++ +ALI
Sbjct: 185 LSIFRRMLSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVEL--NYILSAALI 242
Query: 230 DMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
DMY+KCG ID + ++F + + +V +++MI G A+HG A A +F M P+ +
Sbjct: 243 DMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSI 302
Query: 290 TFIGVLTACSHVGL-----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
TFIG+LTACSH GL K +G + P +HY MVDLLGRAG +EEA ++++
Sbjct: 303 TFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKE 362
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDV 397
M +EP+ +W ALL AC+IHR E+ ++A ++ LE G++++LSN+Y S WD
Sbjct: 363 MRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLES---GDFVLLSNMYCSLNNWDGA 419
Query: 398 SRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGY 457
RVRR++K G++K+ G SW+E G IH+F A +HP I + L L+ R + +G+
Sbjct: 420 ERVRRMMKTRGVRKSRGKSWVELGDG-IHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGF 478
Query: 458 QPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG 517
P VL DVS+EEK+ LM HSEKLA+A+ +L TSPG +RI KNLRIC DCH ++
Sbjct: 479 TPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKI 538
Query: 518 ASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+++ R+I+VRD +RFH F+ G CSC +YW
Sbjct: 539 VSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 569
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 49/250 (19%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ ++ W ++I GY+ D++S++ M + P FT +++ AC +
Sbjct: 156 VFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLGA 215
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ + +H ++ + + +I MY KCG + SR+VF+E+ RD VS
Sbjct: 216 LGNAKWVHG-LMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVA-RDHVS------ 267
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
W AM++G + +A F RM+ V D +T
Sbjct: 268 ------------------------VWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSIT 303
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSG-FGPINNVVVGS-------ALIDMYSKCGSID 239
+G+++AC+ G+++ EG FG + N + ++D+ + G ++
Sbjct: 304 FIGILTACSHCGLVE---------EGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLME 354
Query: 240 DAYRIFVGMK 249
+AY + M+
Sbjct: 355 EAYAVIKEMR 364
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE+V + +W A+I G + G D+ ++ M E + P S T + AC+
Sbjct: 255 RQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHC 314
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G++ L TM+ + + G + + V EM E D+V W
Sbjct: 315 GLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRA 374
Query: 125 LIVA 128
L+ A
Sbjct: 375 LLSA 378
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 315/561 (56%), Gaps = 53/561 (9%)
Query: 4 FPRLVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
+ R +F+ + NPF+ + A++R Y L + + +Y M R+G+ + S K+
Sbjct: 79 YSRRLFDLLT--NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKS 136
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C ++L + G QIHA+ I + G +D + +M+ +Y CG
Sbjct: 137 CIKLLSLLFGIQIHAR-IFINGHQADSLLLTSMMDLYSHCG------------------- 176
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG- 180
E A LF+E+P KD VAW +++ +N + R+A+ FE MQ
Sbjct: 177 ------------KPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTY 224
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ D VT + ++ ACA L +++ + + G+ +N+ ++LI MYS+CG +D
Sbjct: 225 LCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLC--NSLISMYSRCGRMD 282
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
AY +F M ++NV S+S+MI G +M+G AI+ F +M K +P TF VL+ACS
Sbjct: 283 KAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACS 342
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL + + ++P+ HY C+VDLLGRAG L++A +++ M V P+ +W
Sbjct: 343 HCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMW 402
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LLGAC+IH + + + HL EL+ + G+Y++L NIY+SAG WD V+ +R+L+K
Sbjct: 403 RTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEK 462
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G+ P + +E + GV+H+F D++HP +I + L ++ +L+ GY+ + S L+
Sbjct: 463 GIYTTPCCTTIELN-GVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHR 521
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ ++K L HSEKLA+AFG+L T PG T+RI N+R C DCH F S V R++V
Sbjct: 522 LEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVV 581
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHFQ+G+CSC ++W
Sbjct: 582 VRDRSRFHHFQEGRCSCNDFW 602
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 315/555 (56%), Gaps = 49/555 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N W A I + D+I + P S T A AC +++
Sbjct: 165 MFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVR 224
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++LG+Q+HA I+ G+ D+ V N +I Y KCG + + VF+ + R
Sbjct: 225 LNLGRQLHA-FIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR---------- 273
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
K+ V+W +M+ VQN + A F + + TD++
Sbjct: 274 --------------------KNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFM- 312
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+SACA+LG ++ V +A + +N+ VGSAL+DMY KCGSI++A ++F
Sbjct: 313 ISSVLSACAELGGLELGRSVHALAVKACVE--DNIFVGSALVDMYGKCGSIENAEQVFSE 370
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV--KTETKPNGVTFIGVLTACSHVGLK- 304
+ +RN+ ++++MI G+A G A++LF +M +P+ VT I +L+ CS VG
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 305 -----------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+ P +H+AC+VDLLGR+G ++ A + ++ M ++P VWGALLGA
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H E+ +IAA LFEL+ GN+++LSN+ ASAG W++ + VR+ +K G+KKN
Sbjct: 491 CRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNV 550
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
GYSW+ + IH F+A D +H ++EIQ LG L ++ GY P+ L+D+ DEEK
Sbjct: 551 GYSWI-AVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEK 609
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ HSEK+ALAFGL+ G +RI KNLRIC DCH + S+++GREI+VRDN R
Sbjct: 610 ASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHR 669
Query: 534 FHHFQDGKCSCGNYW 548
FH F+DG CSC +YW
Sbjct: 670 FHRFKDGCCSCKDYW 684
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 48/345 (13%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WT+LI G + ++ + +MRR+ + P FT +FKA V G+QIH
Sbjct: 76 WTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLA- 134
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
L GG D++VG + MY K GF G + +FDEMP+R++ +W AY +N
Sbjct: 135 LKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWN----AYISNA------ 184
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
VQ+ + +AI F+ E + +T ++AC +
Sbjct: 185 ---------------------VQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMV 223
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSS 258
+ + G+ +V V + LID Y KCG I A +F + R NV S+ S
Sbjct: 224 RLNLGRQLHAFIVRCGYK--EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCS 281
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPS 311
M+ + A +F + E +P VL+AC+ +G + V
Sbjct: 282 MLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 340
Query: 312 TDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ + +VD+ G+ G +E A ++ ++P E N W A++G
Sbjct: 341 VEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIG 384
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 38/276 (13%)
Query: 7 LVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+VF ++ KN W +++ ++Q H ++ + R+ + P F +S++ AC E+
Sbjct: 265 MVFNRIGNRKNVVSWCSMLAA-LVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAEL 323
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG+ +HA + +++VG+ ++ MY KCG + + +VF E+PER++V+W +
Sbjct: 324 GGLELGRSVHALAV-KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAM 382
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA+ GD++ A LF E+ L G+ Y
Sbjct: 383 IGGYAHQGDIDMALRLFEEMTLGSH-----------------------------GIRPSY 413
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VTL+ ++S C+++G ++ + E + +G + ++D+ + G +D AY
Sbjct: 414 VTLISILSVCSRVGAVERGIQIFE-SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFI 472
Query: 246 VGMKQRNVFSYSSMILGFA-MHGRAH----AAIQLF 276
M + S +LG MHG+ AA +LF
Sbjct: 473 QNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLF 508
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 17/283 (6%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ Y+ + SA + + L+ V WT++++G V N + A+ +F M+ V+
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ 105
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T V A A + + + +A G I +V VG + DMY K G DA
Sbjct: 106 PNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGM--IYDVFVGCSCFDMYCKTGFRGDAC 163
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
+F M QRN+ ++++ I R+ AI F + + +PN +TF L AC
Sbjct: 164 NMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMV 223
Query: 300 --------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + G ++D G+ G + A + ++ N W ++L
Sbjct: 224 RLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSML 283
Query: 352 GA-CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
A Q H + E+EP +++I S + A A +
Sbjct: 284 AALVQNHEEERACMVFLQARKEVEPT---DFMISSVLSACAEL 323
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 303/530 (57%), Gaps = 55/530 (10%)
Query: 35 DSISLYCSMRREGIGPVSFTLSALFKA-CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNT 93
D++ C +R G +FTL+ L K C+ ++ +Q+HA + G
Sbjct: 107 DALRFLCRVRALGRRGNAFTLAILLKPRCS----LAHARQLHANVVAEGHL--------- 153
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
RD + T L+ YAN GD + A LF+E+P++D VAW
Sbjct: 154 -----------------------RDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAW 190
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVET--DYVTLVGVISACAQLGVIKYANWVCEIA 211
++T Y +N + ++A++ FE M+ E+ D VT + ++ AC+ LG + + V A
Sbjct: 191 NVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYA 250
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
E G+G + V ++LI MY +CG +D AYR+F G Q++V ++++MI G A +G +
Sbjct: 251 EEHGYG--GELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGND 308
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-----------KC-YGVSPSTDHYACMV 319
AI +F +M++++ P+ TF GVL+ACSH GL +C YG+ P+ HY C+V
Sbjct: 309 AISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIV 368
Query: 320 DLLGRAGCLEEALKMV-EKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKI 378
DL+GRAG L+EA + V +M V P+ +W LLGAC+IH + ++ + +L EL+ +
Sbjct: 369 DLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQA 428
Query: 379 GNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNS 438
G+Y++L N YA+ G W VS +R+L++ G++ PG + +E + G +HEF A D HP
Sbjct: 429 GDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHN-GTVHEFIADDDAHPRK 487
Query: 439 TEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGAT 498
EI + L ++ +L+ GY PN+ S L+D+ E K+ L HSEKLA+AF LL T
Sbjct: 488 VEIYENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRP 547
Query: 499 VRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+R+ KNLR+C DCH F S + R ++VRD RFHHFQ GKCSC +YW
Sbjct: 548 IRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDRTRFHHFQGGKCSCNDYW 597
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACT 63
R +F+++ ++ W LI Y KD++ L+ MR + P T L +AC+
Sbjct: 176 RKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACS 235
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+Q+ A G+ +L V N++I MY++CG + + +VF P++ VV+WT
Sbjct: 236 SLGALDFGEQVWAYA-EEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWT 294
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A NG F +AI FE M + V
Sbjct: 295 AMISGLAANG--------FGN-----------------------DAISVFEEMIRSDVAP 323
Query: 184 DYVTLVGVISACAQLGVIK-----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D T GV+SAC+ G++ + CE +G NV ++D+ + G +
Sbjct: 324 DEQTFTGVLSACSHSGLVDEGFRFFDMMRCE------YGLKPNVRHYGCIVDLMGRAGLL 377
Query: 239 DDAYRIFVGMKQR---NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
D+AY FV + + + + +++ +HG ++ G++++ + + G
Sbjct: 378 DEAYE-FVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAG 429
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 321/547 (58%), Gaps = 48/547 (8%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFT-LSALFKAC 62
+ R VF+ + +N W+ALI G++L + + L+ +M +G+ +S T +++ +AC
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ + +G+Q+HA + G +DL GN+++ MY K G +
Sbjct: 236 ASLDHLRMGEQLHA-LLAKSGVHADLTAGNSLLSMYAKAGLI------------------ 276
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ A LF+E+ +KD V+++A+V+GYVQN + EA F++MQ VE
Sbjct: 277 -------------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T+V +I AC+ L +++ C G + + +ALIDMY+KCG ID +
Sbjct: 324 PDAATMVSLIPACSHLAALQHGR--CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 381
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
++F M R++ S+++MI G+ +HG A LF +M P+GVTFI +L+ACSH G
Sbjct: 382 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Query: 303 LKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG++P +HY CMVDLL R G L+EA + ++ MP+ + VW AL
Sbjct: 442 LVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVAL 501
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LGAC++++N ++ + + + EL P+ GN+++LSNIY++AG +D+ + VR + K+ G K
Sbjct: 502 LGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFK 561
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
K+PG SW+E + G +H F GD +HP S EI + L ++L ++ GYQP+ VL D+ +
Sbjct: 562 KSPGCSWIEIN-GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 620
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK++ L+ HSEKLA+A+G+L+ S T+ + KNLR+C DCH + S V R I+VRD
Sbjct: 621 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRD 680
Query: 531 NMRFHHF 537
RFHHF
Sbjct: 681 ANRFHHF 687
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 64/326 (19%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M R + P ++T KAC+ + D G+ IH I G +DL+V ++ MYVKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCA 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L P+ A +F +P +D VAW AM+ GY
Sbjct: 60 CL----------PD---------------------AAHIFATMPARDLVAWNAMLAGYAH 88
Query: 163 NAKPREAIEYF--ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN 220
+ A+ + +MQ + + TLV ++ AQ G + V + P
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 221 N--------VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAA 272
N V++G+AL+DMY+KCGS+ A R+F M RN ++S++I GF + R A
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 273 IQLFGDMVKTETKPNGVTFI------GVLTACS-----------HVGLKCYGVSPSTDHY 315
LF M+ G+ F+ L AC+ H L GV
Sbjct: 209 FLLFKAMLA-----QGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAG 263
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVE 341
++ + +AG +++A+ + ++M V+
Sbjct: 264 NSLLSMYAKAGLIDQAIALFDEMAVK 289
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 314/555 (56%), Gaps = 50/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTEVL 66
+F+++ K+ W +LI G+ + L + L MR E G+ P T+ + AC V
Sbjct: 95 LFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVG 154
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ +G+ IH + G ++ V N++I +Y KCG L
Sbjct: 155 ELDVGKCIHGIAVK-SGMLLEVKVVNSLINLYGKCGCL---------------------- 191
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
E+A LF + ++ V+W +MV +V + I YF M+ AG+ +D
Sbjct: 192 ---------EAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQA 242
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V ++ AC LGV K A V G N+ + +AL+D+Y+K G++ D+ ++F
Sbjct: 243 TVVSLLLACENLGVRKLAEAVHGYILNGGLD--GNLAIATALLDLYAKLGTLSDSCKVFG 300
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
GM + ++++M+ +AMHGR AI+ F MV+ P+ VTF +L+ACSH GL
Sbjct: 301 GMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEE 360
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YGV +HY+CMVDLLGR+G L +A K+++ MP+EPN GVWGAL+GAC
Sbjct: 361 GKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGAC 420
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++ N E+ + A LF L+P NYI LSN+Y++AG W D S+VR L+K L +NPG
Sbjct: 421 RVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPG 480
Query: 415 YSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
S++E G++ IH F GD +HP++ +I L +L+ + + G+ VL+DV +E K
Sbjct: 481 CSYIEHGNK--IHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVK 538
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ ++ HSEKLA+AFGLL T+ G + I KN+RIC DCH F S + R I++RD R
Sbjct: 539 EDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKR 598
Query: 534 FHHFQDGKCSCGNYW 548
FHHF +G CSCG+YW
Sbjct: 599 FHHFTNGLCSCGDYW 613
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 23 LIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLG 82
++ +I L +S + S V +SAL A + +S + +H + I
Sbjct: 9 ILHKFISSIRLYNSFASQLSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSV 68
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSR---KVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ ++G+ ++ YV+ LGC++ ++FDE+P++D+VSW LI ++ D+
Sbjct: 69 NYNHG-FIGDQLVSSYVE---LGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICL 124
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQL 198
GL RM++ G++ + VT++ V+SACA +
Sbjct: 125 GLLF-------------------------------RMRFEMGLKPNEVTVIPVVSACAGV 153
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
G + + IA SG + V V ++LI++Y KCG ++ A +F GM +++ S++S
Sbjct: 154 GELDVGKCIHGIAVKSGM--LLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNS 211
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY-----------G 307
M+ G A I F M + + T + +L AC ++G++ G
Sbjct: 212 MVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGG 271
Query: 308 VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ + ++DL + G L ++ K+ M + P+ W A+L + +H
Sbjct: 272 LDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMH 320
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 299/551 (54%), Gaps = 53/551 (9%)
Query: 16 NPFLWTALIRGYI---LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL-DVSLG 71
+ FL LIR ++ + + + + M R + P FT L K+C + +G
Sbjct: 96 DAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVG 155
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMY--VKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
Q HA + G F +D YV NT+I MY GFLG +R VF+ MP
Sbjct: 156 LQAHAAALKFG-FAADHYVSNTLIHMYSCFGAGFLGDARNVFERMPR------------- 201
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
ESA V W+AM+ GYV+ +A+ F MQ +GV D VT++
Sbjct: 202 ------ESA------------VTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVI 243
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
GV++A A LG ++ WV E G G +V + +ALID +KCG +D A +F GM+
Sbjct: 244 GVLAAAADLGALELTRWVGRFVEREGIG--KSVTLCNALIDTLAKCGDVDGAVAVFEGME 301
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
+R V S++S+I AM GR A+ +F +M P+ V FIGVLTACSH G+
Sbjct: 302 ERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRG 361
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
YG+ P +HY CMVD+ GRAG +E+ L+ V MP++PN +W L+ AC+ H
Sbjct: 362 YFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAH 421
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
E+ + +L P NY++LSN+YA W + S +RR + G+KK PG S
Sbjct: 422 GRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSL 481
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
+E D G +HEF AGD +HP EI + + ++ L+ G+ VL D+ +E+K+ L
Sbjct: 482 VELD-GEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATSEVLLDLDEEDKEGAL 540
Query: 478 MTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHF 537
HSEKLA+AF LL T PG VR++KNLR+C DCH + SQV REIVVRD RFH F
Sbjct: 541 QWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYNREIVVRDRSRFHRF 600
Query: 538 QDGKCSCGNYW 548
+DG CSC ++W
Sbjct: 601 KDGSCSCKDFW 611
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ W+A+I GY+ G D++ L+ M+ G+ P T+ + A ++
Sbjct: 193 RNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ L + + + + G + + N +I KCG + + VF+ M ER VVSWT +
Sbjct: 253 GALELTRWV-GRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSV 311
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A A G + A G+F E M+ GV D
Sbjct: 312 IDALAMEGRGKEAVGVFEE-------------------------------MKAVGVLPDD 340
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V +GV++AC+ G++ + + + +G + ++DM+ + G ++
Sbjct: 341 VAFIGVLTACSHAGMVDEGRGYFD-SMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFV 399
Query: 246 VGMKQR-NVFSYSSMILGFAMHGR 268
M + N + +++ HGR
Sbjct: 400 RAMPMKPNPIIWRTLVAACRAHGR 423
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 316/558 (56%), Gaps = 51/558 (9%)
Query: 6 RLVFEQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+Q++ KN + W +I Y G K+++ L+ +M EG+ TL AC
Sbjct: 79 RSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA 138
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ G+ +HA + SD VG +++ M+ KC
Sbjct: 139 SLPSEEEGRIVHAIAVD-KRLESDTMVGTSLVNMFGKCK--------------------- 176
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
++++A +F+ LP K+ V W MV Y QN + ++AI+ F M GV+
Sbjct: 177 ----------NVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQP 226
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D VT + +I ACA L V + SG P++ V +G+A++ Y KCG +D+A
Sbjct: 227 DAVTFLTIIDACAALAAHTEGRMVHDDITASGI-PMD-VALGTAVMHFYGKCGRLDNARA 284
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
IF + ++N ++S+++ +A +G AI+L+ +MV+ + NG+TF+G+L ACSH G
Sbjct: 285 IFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGR 344
Query: 303 -----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ +GV P +HY ++DLLGR+G L+ + ++ MP EP+ W ALL
Sbjct: 345 SMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALL 404
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H + + A ++EL+P+ G YI+LSN+Y+S G D+ R R+ +++ G+ K
Sbjct: 405 GACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITK 464
Query: 412 NPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD 470
PG S +E DR +HEF A HP I + L R++ GY ++R+VL DV +
Sbjct: 465 QPGLSSIEVKDR--VHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEE 522
Query: 471 EEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRD 530
EEK+++L HSE+LA+AFGL++T PG + I+KNLR+C DCH + S+V+GR+IVVRD
Sbjct: 523 EEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRD 582
Query: 531 NMRFHHFQDGKCSCGNYW 548
+RFHHF++G CSCG+YW
Sbjct: 583 AIRFHHFENGACSCGDYW 600
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 52/323 (16%)
Query: 44 RREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF 103
RRE I T L K C + + G+++H+ ++ G+ SD + N +I MY KCG
Sbjct: 20 RREEIS----TYVLLLKKCADSKALLEGKRVHS-CLVKDGYASDRLIANLLIEMYGKCGG 74
Query: 104 LGCSRKVFDEMPER--DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV 161
+ +R VFD++ E+ DV+SW +I AY NG
Sbjct: 75 IAEARSVFDQIQEKNADVISWNGIIGAYTQNG---------------------------- 106
Query: 162 QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINN 221
+EA+ F+ M GV + VTL+ I ACA L + V IA ++
Sbjct: 107 ---LGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLE--SD 161
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
+VG++L++M+ KC ++D A +F + ++N+ ++++M+ ++ + + AIQ+F M
Sbjct: 162 TMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDL 221
Query: 282 TETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEE 330
+P+ VTF+ ++ AC+ H + G+ ++ G+ G L+
Sbjct: 222 EGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDN 281
Query: 331 ALKMVEKMPVEPNGGVWGALLGA 353
A + + + + N W A+L A
Sbjct: 282 ARAIFDSLG-KKNTVTWSAILAA 303
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 308/553 (55%), Gaps = 65/553 (11%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WTA+I G++ ++++ L+ M+R+G+ P FT S + A L V ++H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVH 416
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQ VK + ER T L+ AY G +
Sbjct: 417 AQV--------------------VKTNY------------ERSSTVGTALLDAYVKLGKV 444
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
E A +F+ + KD VAW+AM+ GY Q + AI+ F + G++ + T +++ C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 196 AQLGVIKYANWVCEIAEGSGFGPI-------NNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
A + +G F +++ V SAL+ MY+K G+I+ A +F
Sbjct: 505 AATN--------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG- 307
+++++ S++SMI G+A HG+A A+ +F +M K + K +GVTFIGV AC+H GL G
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 308 -----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
++P+ +H +CMVDL RAG LE+A+K++E MP +W +L AC++
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H+ E+ ++AA + ++P+ Y++LSN+YA +G W + ++VR+L+ +KK PGYS
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRI 476
W+E + + F AGD +HP +I L DL RL+ GY+P+ VL D+ DE K+ +
Sbjct: 737 WIEV-KNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV 795
Query: 477 LMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHH 536
L HSE+LA+AFGL+ T G+ + I+KNLR+C DCHL + +++ REIVVRD+ RFHH
Sbjct: 796 LAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHH 855
Query: 537 F-QDGKCSCGNYW 548
F DG CSCG++W
Sbjct: 856 FSSDGVCSCGDFW 868
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 55/361 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++K +N WT LI GY + ++L+ M+ EG P SFT +A E
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Q+H ++ G + V N++I +Y+KCG + +R +FD+ + VV+W +
Sbjct: 208 GVGGRGLQVHT-VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 126 IVAYANNG-DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
I YA NG D+E A G+F Y R+ Y V
Sbjct: 267 ISGYAANGLDLE-ALGMF-----------------------------YSMRLNY--VRLS 294
Query: 185 YVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+ VI CA L +++ + C + + +G + + + +AL+ YSKC ++ DA R
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVK---YGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 244 IF-----VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+F VG NV S+++MI GF + A+ LF +M + +PN T+ +LTA
Sbjct: 352 LFKEIGCVG----NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 299 S-------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + S+ ++D + G +EEA K+ + + + W A+L
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 352 G 352
Sbjct: 467 A 467
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 34/294 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F++ ++ + +L+ G+ G +++ L+ ++ R G+ S++ K + D
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+Q+H Q I G F D+ VG +++ Y+K RKVFDEM ER+VV+WT LI
Sbjct: 109 ELFGRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI- 166
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+GY +N+ E + F RMQ G + + T
Sbjct: 167 ------------------------------SGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ A+ GV V + +G + V ++LI++Y KCG++ A +F
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
+ ++V +++SMI G+A +G A+ +F M + + +F V+ C+++
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ W+A++ GY G + +I ++ + + GI P FT S++ C +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT-N 508
Query: 68 VSLGQ--QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
S+GQ Q H I S L V + ++ MY K G + + +VF E+D+VSW +
Sbjct: 509 ASMGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G + +A++ F+ M+ V+ D
Sbjct: 568 ISGYAQHG-------------------------------QAMKALDVFKEMKKRKVKMDG 596
Query: 186 VTLVGVISACAQLGVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +GV +AC G+++ +I P S ++D+YS+ G ++ A ++
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE--HNSCMVDLYSRAGQLEKAMKV 654
Query: 245 FVGM 248
M
Sbjct: 655 IENM 658
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 137 SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
+A LF++ P +D+ ++ +++ G+ ++ + +EA F + G+E D V+ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 197 QLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
L + + C+ + FG +++V VG++L+D Y K + D ++F MK+RNV +
Sbjct: 105 TLCDELFGRQLHCQCIK---FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPST 312
++++I G+A + + LF M T+PN TF L + G+ G+ T
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/463 (41%), Positives = 284/463 (61%), Gaps = 21/463 (4%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-----REGIGPVSFTLSAL 58
+ L+F+ V N FL+ A+IR Y +I++Y M I P FT +
Sbjct: 64 YANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFV 123
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
K+C ++ LG+Q+H G S+ V N+++ MYVKC L + +VF+EM ERD
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQ-KSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERD 182
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
VSW LI + G M A +F E+ K +WTA+V+GY + +A+E+F RMQ
Sbjct: 183 AVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQM 242
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G+E D ++LV V+ CAQLG ++ W+ A+ +GF + N+ V +ALI+MY+KCGSI
Sbjct: 243 VGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGF--LRNICVCNALIEMYAKCGSI 300
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D R+F MK+R+V S+S+MI+G A HGRA AI+LF +M K + +P+ +TF+G+LTAC
Sbjct: 301 DQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTAC 360
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
+H GL + Y + P +HY C+V+LLG +G L++AL++V+KMP +P+ +
Sbjct: 361 AHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPI 420
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
WG+LL +C+ H N +IA IA HL ELEP GNY++LSN+YA G WD VSR+R+L++
Sbjct: 421 WGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRS 480
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLL 449
+KK PG S +E D ++ EF +GD + P S I + L L+
Sbjct: 481 KSMKKTPGCSSIEVD-NMVQEFASGDDSKPFSKAICRVLKLLV 522
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 226 SALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV----- 280
+ ++D+ + G + A +F G+ N F Y++MI + + AI ++ M+
Sbjct: 50 TKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHG 109
Query: 281 KTETKPNGVTFIGVLTACSHVGLKCY-------------GVSPSTDHYACMVDLLGRAGC 327
+ P+ TF V+ +C+ GL CY G +T +V++ +
Sbjct: 110 ENPIFPDKFTFPFVVKSCA--GLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDS 167
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI-AANHLFELEPDK-IGNYIILS 385
L++A ++ E+M E + W L+ + + Q+ A +FE DK I ++ +
Sbjct: 168 LDDAHRVFEEM-TERDAVSWNTLISG-----HVRLGQMRRARAIFEEMQDKTIFSWTAIV 221
Query: 386 NIYASAGMWDDVSRVRRLLKMTGLKKN 412
+ YA G + D R ++M G++ +
Sbjct: 222 SGYARIGCYADALEFFRRMQMVGIEPD 248
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 309/561 (55%), Gaps = 42/561 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQ---GHLKDSISLYCS-MRREGIGPVSFTLSALFKACT 63
+F + FL+ LI I Q + + SLY + + + P SFT +LFKAC
Sbjct: 202 IFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACC 261
Query: 64 EVLD-VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
G +H + D +V +++ Y K G + SR +FD + E D+ +W
Sbjct: 262 SNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATW 321
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
++ AYA + S F++ E++ F MQ G+
Sbjct: 322 NVILNAYARSSSYHSYSNSFDDADFS------------------LESLYLFRDMQVIGIR 363
Query: 183 TDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT+V +ISAC+ LG + WV C + N VG+A +DMYSKCG ++ A
Sbjct: 364 PNEVTIVALISACSNLGAVSQGFWVHCFVLRNK---IKMNRFVGTAFVDMYSKCGCLNLA 420
Query: 242 YRIFVGMKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
++F M + R+ F Y++MI GFA+HG + A++L+ M P+ TF+ + ACS
Sbjct: 421 CQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACS 480
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
HVGL + +GV P +HY C++DLLGRAG L+EA + + MP++PN +W
Sbjct: 481 HVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLW 540
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
+LLGA +IH N + ++A L ELEP+ GNY++LSN+YAS G +DV RVR+L+K
Sbjct: 541 RSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHH 600
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G+ K PG+S +E +G +HEF GD +HP S EI + ++ RL+ G++ L+D
Sbjct: 601 GVNKLPGFSLVE-IKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFD 659
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +E+K+ +L HSE+LA+AF L+ + +RI+KNLR+C DCH F S REI+
Sbjct: 660 LEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREII 719
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSC +YW
Sbjct: 720 VRDRNRFHHFKDGSCSCLDYW 740
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 306/555 (55%), Gaps = 52/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +K K+ W ++I YI G +++ L+ M + + P S T L T++ D
Sbjct: 373 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 431
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+++H +G F S++ V NT++ MY KCG +G S KV
Sbjct: 432 LHLGKELHCDLAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKV----------------- 473
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F + +D + W ++ V + + RM+ GV D T
Sbjct: 474 --------------FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT 519
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ ++ C+ L + + G F G ++V VG+ LI+MYSKCGS+ +++++F
Sbjct: 520 MLSILPVCSLLAAKRQGKEI----HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 575
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
MK ++V +++++I M+G A++ FG+M P+ V F+ ++ ACSH GL
Sbjct: 576 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 635
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K Y + P +HYAC+VDLL R+ L++A + MP++P+ +WGALL A
Sbjct: 636 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 695
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EIA+ + + EL PD G Y+++SNIYA+ G WD V +R+ +K GLKK+P
Sbjct: 696 CRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDP 755
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E V + F G E+ + LG L + +GY NL+ VL+D+ ++EK
Sbjct: 756 GCSWMEIQNKV-YVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEK 814
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ IL HSE+LA+AFGLL T PG +++MKNLR+CEDCH S+++ RE++VRD R
Sbjct: 815 RDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANR 874
Query: 534 FHHFQDGKCSCGNYW 548
FH F+DG CSCG+YW
Sbjct: 875 FHVFKDGACSCGDYW 889
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 35/287 (12%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N +LW ++IR G +++SLY +R + P ++T ++ AC +LD + + IH
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ +L GF SDLY+GN +I MY + L +RKVF+EMP RDVVSW LI Y NG
Sbjct: 139 DR-VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-- 195
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
W EA+E + R + GV D T+ V+ AC
Sbjct: 196 ----------------YWN-------------EALEIYYRFRNLGVVPDSYTMSSVLRAC 226
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
LG ++ + + + E G +V+V + L+ MY K + D RIF M R+ S
Sbjct: 227 GGLGSVEEGDIIHGLIEKIGIK--KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVS 284
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+++MI G++ G +I+LF +MV + KP+ +T +L AC H+G
Sbjct: 285 WNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLG 330
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 175/360 (48%), Gaps = 48/360 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ W +LI GY G+ +++ +Y R G+ P S+T+S++ +AC +
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 229
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G IH I G D+ V N ++ MY K L R++FD+M RD VSW +
Sbjct: 230 GSVEEGDIIHG-LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 288
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y+ G E + LF E+ V KP D
Sbjct: 289 ICGYSQVGLYEESIKLFMEM---------------VNQFKP-----------------DL 316
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+ ++ AC LG +++ +V + SG+ + + LI+MY+KCG++ + +F
Sbjct: 317 LTITSILQACGHLGDLEFGKYVHDYMITSGYEC--DTTASNILINMYAKCGNLLASQEVF 374
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
GMK ++ S++SMI + +G A++LF M+KT+ KP+ VT++ +L+ + +G
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLH 433
Query: 303 ----LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
L C G + + +VD+ + G + ++LK+ E M + W ++ +C
Sbjct: 434 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 492
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 119 VVSWTELIVAYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ +LI YA+ D S+ +F P + W +++ N EA+ + Q
Sbjct: 48 VIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQ 107
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++ D T VI+ACA L + A + + GFG +++ +G+ALIDMY +
Sbjct: 108 RIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG--SDLYIGNALIDMYCRFND 165
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D A ++F M R+V S++S+I G+ +G + A++++ P+ T VL A
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 225
Query: 298 CSHVG 302
C +G
Sbjct: 226 CGGLG 230
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 317/560 (56%), Gaps = 53/560 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREG-IGPVSFTLSALFKACTEV 65
VF Q++ N F+W ALIR K +I+LY M +G + T + KAC +
Sbjct: 82 VFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYL 141
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S G+QIHAQ IL GF SD+Y+ N+++ Y C L
Sbjct: 142 FALSEGEQIHAQ-ILKLGFDSDVYINNSLVHFYATCDRL--------------------- 179
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A G+F+ + + V+W ++ +V+ + A+ F MQ E D
Sbjct: 180 ----------DFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDG 228
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ + +ACA +G + W + + +N+V++ ++L+DMY KCGS++ A ++
Sbjct: 229 YTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQL 288
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGL 303
F M +R+V S++SMILGF+ HG AA++ FG MV+TE PN +TF+GVL+AC+H GL
Sbjct: 289 FHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGL 348
Query: 304 KC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
Y + P +HY C+VDLL RAG ++EAL +V MP+ P+ +W +LL
Sbjct: 349 VSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLL 408
Query: 352 GAC-QIHRNPEIAQIAANHLFELEPDKI-GNYIILSNIYASAGMWDDVSRVRRLLKMTGL 409
AC + + E+++ A + E E G Y++LS +YASA W+DV VR+L+ G+
Sbjct: 409 DACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGV 468
Query: 410 KKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL-RSVLYDV 468
K PG S +E D GV HEF AGD +HP + EI AL + +R++ GY P+ ++ + D
Sbjct: 469 VKEPGCSSIEID-GVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDE 527
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+ + K+ L HSE+LA+AFGLL T PG +RI KNLR+C +CH S+V REI+V
Sbjct: 528 TIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIV 587
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD +RFHHF+DG CSC +YW
Sbjct: 588 RDRIRFHHFKDGACSCMDYW 607
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%), Gaps = 44/304 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F + VF+++ ++ W +I ++ G +++L+ M++ P +T+ ++ AC
Sbjct: 181 FAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANACA 239
Query: 64 EVLDVSLGQQIHAQTILLGGF----TSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
+ +SLG H LL F +D+ + +++ MY KCG L + ++F MP+RDV
Sbjct: 240 GMGSLSLGMWAH--VFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDV 297
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QY 178
SW +I+ ++ +G++ + A+EYF M +
Sbjct: 298 TSWNSMILGFSTHGEVAA-------------------------------ALEYFGCMVRT 326
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
+ + +T VGV+SAC G++ ++ + + + L+D+ ++ G I
Sbjct: 327 EKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMV-TEYKIKPELEHYGCLVDLLARAGLI 385
Query: 239 DDAYRIFVGMKQR-NVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
D+A + M R ++ + S++ + +A ++L +M + + G GV
Sbjct: 386 DEALDVVSNMPMRPDLVIWRSLLDACC---KQNAGVELSEEMARRVLEAEGGVCSGVYVL 442
Query: 298 CSHV 301
S V
Sbjct: 443 LSRV 446
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 310/560 (55%), Gaps = 48/560 (8%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D +L E ++ N + +I GY + L+ M+ + ++L
Sbjct: 291 LDEMKKLFHEMIERDN-VSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
V + +G+QIHAQ +LLG + DL VGN +I MY KCG L ++ F
Sbjct: 350 VAGSVPHIGIGKQIHAQLVLLGLSSEDL-VGNALIDMYSKCGMLDAAKTNF--------- 399
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
N D K V+WTAM+TG VQN + EA++ F M+ AG
Sbjct: 400 ---------INKND-------------KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAG 437
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D T I A + L +I + SG +++V GSAL+DMY+KCG +D+
Sbjct: 438 LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGH--MSSVFSGSALLDMYTKCGCLDE 495
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A + F M +RN S++++I +A +G+A AI++F M+ KP+ VTF+ VL+ACSH
Sbjct: 496 ALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSH 555
Query: 301 VGL--KC----------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL +C YG+SP +HY+C++D LGR G ++ +M+ +MP E + +W
Sbjct: 556 NGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWS 615
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
++L +C+ H N ++A++AA LF + Y+ILSNI+A AG W+D + V+++++ G
Sbjct: 616 SILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRG 675
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
L+K GYSW+E V + F + D T+P TEI+ L L + GY+P+ L V
Sbjct: 676 LRKETGYSWVEVKHKV-YSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQV 734
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
D+ K L HSE+LA+AF L+ T PG +R+MKNL C DCH + S+++ R+I+V
Sbjct: 735 DDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIV 794
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD+ RFHHF+DG CSCG+YW
Sbjct: 795 RDSSRFHHFKDGFCSCGDYW 814
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 53/362 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ +++ + A++ G +G +++ L+ +MRR+G+ FT S + T V
Sbjct: 195 RRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGV 254
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ LG+Q+H ++ +S+++V N+++ Y KC L +K+F EM ERD
Sbjct: 255 GDLCLGRQVHG--LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERD------- 305
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD- 184
V++ M+ GY N + F MQ +
Sbjct: 306 ------------------------NVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQA 341
Query: 185 --YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
Y +L+ V + +G+ K + A+ G + +VG+ALIDMYSKCG +D A
Sbjct: 342 LPYASLLSVAGSVPHIGIGKQIH-----AQLVLLGLSSEDLVGNALIDMYSKCGMLDAAK 396
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F+ + S+++MI G +G+ A+QLF M + P+ TF + A S++
Sbjct: 397 TNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLA 456
Query: 303 -------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L Y G S + ++D+ + GCL+EAL+ ++MP E N W A++
Sbjct: 457 MIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVI 515
Query: 352 GA 353
A
Sbjct: 516 SA 517
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD-VVSWTELIVAYANNGDMESAGGL 141
GF Y N ++ + G L +R +FD+MP R+ S ++ Y+ +G + +A L
Sbjct: 29 GFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHL 88
Query: 142 FNELP--LKDKVAWTAMVTGYVQ--NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
F P L+D V WT M+ + A+ +A+ F M GV D VT+ V++
Sbjct: 89 FLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPA 148
Query: 198 LGVIKYANWVCEIAEGS-GFGPIN-NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
G A + + + G ++ NVVV + L+D Y K G + A R+F M R+ +
Sbjct: 149 SGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVT 208
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG------VS 309
Y++M++G + G A+ LF M + TF VLT + VG C G V+
Sbjct: 209 YNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVA 268
Query: 310 PSTDHYA----CMVDLLGRAGCLEEALKMVEKM 338
+T ++D + CL+E K+ +M
Sbjct: 269 RATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 148/357 (41%), Gaps = 53/357 (14%)
Query: 15 KNPFLWTALIRGYILQ--GHLKDSISLYCSMRREGIGPVSFTLSALFK---ACTEVLDVS 69
++ WT +I + D++SL+ M REG+ P T++ + A
Sbjct: 97 RDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAI 156
Query: 70 LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY 129
+ +H + LG S++ V NT++ Y K G L +R+VF EMP RD V+
Sbjct: 157 IIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVT-------- 208
Query: 130 ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
+ AM+ G + EA++ F M+ G+ T
Sbjct: 209 -----------------------YNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFS 245
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
V++ +G + V + +NV V ++L+D YSKC +D+ ++F M
Sbjct: 246 TVLTVATGVGDLCLGRQVHGLV---ARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMI 302
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT---ACSHVG---- 302
+R+ SY+ MI G+A + A ++LF +M + + +L+ + H+G
Sbjct: 303 ERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQ 362
Query: 303 ----LKCYGVSPSTDHYACMVDLLGRAGCLEEA-LKMVEKMPVEPNGGVWGALLGAC 354
L G+S ++D+ + G L+ A + K + G W A++ C
Sbjct: 363 IHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN--DKTGVSWTAMITGC 417
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 305/555 (54%), Gaps = 52/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF +K K+ W ++I YI G +++ L+ M + + P S T L T++ D
Sbjct: 432 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 490
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+++H +G F S++ V NT++ MY KCG +G S KV
Sbjct: 491 LXLGKELHCDLAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKV----------------- 532
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F + +D + W ++ V + + RM+ GV D T
Sbjct: 533 --------------FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT 578
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ ++ C+ L + + G F G ++V VG+ LI+MYSKCGS+ +++++F
Sbjct: 579 MLSILPVCSLLAAKRQGKEI----HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 634
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
MK ++V +++++I M+G A++ FG+M P+ V F+ ++ ACSH GL
Sbjct: 635 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 694
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K Y + P +HYAC+VDLL R+ L++A + MP++P+ +WGALL A
Sbjct: 695 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 754
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EIAQ + + EL PD G Y+++SN+YA+ G WD V +R+ +K GLKK+P
Sbjct: 755 CRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDP 814
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E V + F G E+ + LG L + +GY NL+ VL+D+ ++EK
Sbjct: 815 GCSWMEIQNKV-YVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEK 873
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ IL HSE+LA+AFGLL T PG +++MKNLR+CEDCH S++ RE++VRD R
Sbjct: 874 RDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANR 933
Query: 534 FHHFQDGKCSCGNYW 548
FH F+DG CSCG+YW
Sbjct: 934 FHVFKDGACSCGDYW 948
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 35/287 (12%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N + W ++IR G +++SLY +R + P ++T ++ AC +LD + + IH
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+ +L GF SDLY+GN +I MY + L +RKVF+EMP RDVVSW LI Y NG
Sbjct: 198 DR-VLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-- 254
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
W EA+E + R + GV D T+ V+ AC
Sbjct: 255 ----------------YWN-------------EALEIYYRFRNLGVVPDSYTMSSVLRAC 285
Query: 196 AQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
LG ++ + + + E G +V+V + L+ MY K + D RIF M R+ S
Sbjct: 286 GGLGSVEEGDIIHGLIEKIGIK--KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVS 343
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+++MI G++ G +I+LF +MV + KP+ +T +L AC H+G
Sbjct: 344 WNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLG 389
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 175/360 (48%), Gaps = 48/360 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE++ ++ W +LI GY G+ +++ +Y R G+ P S+T+S++ +AC +
Sbjct: 229 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 288
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V G IH I G D+ V N ++ MY K L R++FD+M RD VSW +
Sbjct: 289 GSVEEGDIIHG-LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y+ G E + LF E+ V KP D
Sbjct: 348 ICGYSQVGLYEESIKLFMEM---------------VNQFKP-----------------DL 375
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+ ++ AC LG +++ +V + SG+ + + LI+MY+KCG++ + +F
Sbjct: 376 LTITSILQACGHLGDLEFGKYVHDYMITSGYEC--DTTASNILINMYAKCGNLLASQEVF 433
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG--- 302
GMK ++ S++SMI + +G A++LF M+KT+ KP+ VT++ +L+ + +G
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLX 492
Query: 303 ----LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
L C G + + +VD+ + G + ++LK+ E M + W ++ +C
Sbjct: 493 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 551
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 119 VVSWTELIVAYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
V+ +LI YA+ D S+ +F P + W +++ N EA+ + Q
Sbjct: 107 VIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQ 166
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++ D T VI+ACA L + A + + GFG +++ +G+ALIDMY +
Sbjct: 167 RIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFG--SDLYIGNALIDMYCRFND 224
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D A ++F M R+V S++S+I G+ +G + A++++ P+ T VL A
Sbjct: 225 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 284
Query: 298 CSHVG 302
C +G
Sbjct: 285 CGGLG 289
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 221/599 (36%), Positives = 310/599 (51%), Gaps = 105/599 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG------------------ 49
VFE++++K+ W A++ GY G +D++SL+ MR E I
Sbjct: 96 VFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGF 155
Query: 50 -----------------PVSFTLSALFKACTEVLDVSLGQQIHAQTI--LLGGF----TS 86
P TL +L AC V + G++ H ++ +L G T
Sbjct: 156 GCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTD 215
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
DL V N +I MY KC L E A +F+E+
Sbjct: 216 DLAVINALIDMYAKCKSL-------------------------------EVARAMFDEIC 244
Query: 147 LKDK--VAWTAMVTGYVQNAKPREAIEYFERM---QYAGVETDYVTLVGVISACAQLGVI 201
KD+ V WT M+ GY Q+ A++ F M V D+ T+ V+ ACA+L +
Sbjct: 245 PKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF-TISCVLMACARLAAL 303
Query: 202 KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMIL 261
K+ + + + V + LIDMYSK G +D A +F M +RN S++S++
Sbjct: 304 KFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLT 363
Query: 262 GFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVS 309
G+ MHG AA+ L +G+TF+ VL ACSH G+ K + V
Sbjct: 364 GYGMHG---AALVL-----------DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVD 409
Query: 310 PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANH 369
P +HYACM DL GRAG L EA +++ M +EP VW ALL AC+ H N E+A+ AA
Sbjct: 410 PGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKK 469
Query: 370 LFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFR 429
L EL+ D G Y +LSNIYA+A W DV+R+R L+K TG+KK PG+SW++G +G + F
Sbjct: 470 LLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKG-METFY 528
Query: 430 AGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFG 489
GD TH S +I + L DL+ R++A GY P L+DV DEEK L+ HSEKLALA+
Sbjct: 529 VGDRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYA 588
Query: 490 LLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+LT PGA +RI KNLRIC D H + S ++ EI++RD+ RFH F++G CSC YW
Sbjct: 589 ILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 88 LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPL 147
+VGN ++ MY KCG + + KVF+ M +DVV+W ++ Y+ NG E A LF ++
Sbjct: 74 FFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE 133
Query: 148 K----DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKY 203
+ D V W+++++GY Q EA++ F +M + VTL+ ++SACA +G + +
Sbjct: 134 EKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLH 193
Query: 204 AN-----WVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF--VGMKQRNVFSY 256
V I +G +++ V +ALIDMY+KC S++ A +F + K R+V ++
Sbjct: 194 GKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTW 253
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTET--KPNGVTFIGVLTACSHVGLKCYG------- 307
+ MI G+A HG A+ A+QLF +M K + PN T VL AC+ + +G
Sbjct: 254 TVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYV 313
Query: 308 -----VSPSTDHYA-CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ A C++D+ ++G ++ A + + M + N W +LL +H
Sbjct: 314 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMH 368
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 86/297 (28%)
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVTLVGVISACAQLGVIKYANWVCE 209
V+W ++V+ Y P +A+ F M G+ D V +V ++ LG
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFF-------- 75
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
VG+AL+DMY+KCG ++DA ++F M+ ++V ++++M+ G++ +GR
Sbjct: 76 --------------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRF 121
Query: 270 HAAIQLFGDMVKTET-----------------------------------KPNGVTFIGV 294
A+ LFG M + + +PN VT + +
Sbjct: 122 EDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSL 181
Query: 295 LTACSHVG-------LKCYGV--------SPSTDHYA---CMVDLLGRAGCLEEALKMVE 336
L+AC+ VG CY V + TD A ++D+ + LE A M +
Sbjct: 182 LSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFD 241
Query: 337 KM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFEL--EPDKIGNYIILSNIYAS 390
++ P + + W ++G H + ANH +L E KI N I+ ++ S
Sbjct: 242 EICPKDRDVVTWTVMIGGYAQHGD-------ANHALQLFSEMFKIDNCIVPNDFTIS 291
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 185/436 (42%), Positives = 270/436 (61%), Gaps = 15/436 (3%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ +A +G + LF+E+P +D ++W M+ YV N K EA+E F+RM+ +G+ D
Sbjct: 1 MLAGFARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPD 60
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TLV ++SA AQL ++++ + I + P+ + +G+AL+DMY+KCG I+ + +
Sbjct: 61 EATLVTMLSASAQLCLLEHGQSIHSIIDSLSL-PMT-ISIGTALLDMYAKCGCIEQSRLL 118
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +R+V +++ MI G A HG A+ LF + P VTF+GVL ACS GL
Sbjct: 119 FENMPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLV 178
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG+ P +HY CMVDLLGRAG + EA+K++E M + P+ +W +L
Sbjct: 179 KEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAMVLC 238
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH E+ + N L EL+P G+Y+ L++IYA++ W+DV RVRRL+ K
Sbjct: 239 ACRIHGLAELGEKIGNRLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKV 298
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+S +E RG +H F AG H S EIQ+ L + RL A GY PN+ VL+D+ +EE
Sbjct: 299 AGWSLIEA-RGKVHRFVAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEE 357
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ + HSE+LA+AFGLL T PG+ +RI+KNLR+C DCH S+V REI+VRD
Sbjct: 358 KENAIKVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDGS 417
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++GKCSC +YW
Sbjct: 418 RFHHFKEGKCSCLDYW 433
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 33/241 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ ++ W ++ Y+ G L +++ + MR G+ P TL + A ++
Sbjct: 17 LFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCL 76
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQ IH+ L + +G ++ MY KCG + SR +F+ MP RDV +W +I
Sbjct: 77 LEHGQSIHSIIDSLS-LPMTISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMIC 135
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A++G ++A+ FER G+ VT
Sbjct: 136 GLASHG-------------------------------LGKDALTLFERFLNEGLHPMNVT 164
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
VGV++AC++ G++K ++ S +G + ++D+ + G + +A ++
Sbjct: 165 FVGVLNACSRAGLVKEGRHYFQMMTDS-YGIEPEMEHYGCMVDLLGRAGLVFEAIKVIES 223
Query: 248 M 248
M
Sbjct: 224 M 224
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL+FE + ++ W +I G G KD+++L+ EG+ P++ T + AC+
Sbjct: 116 RLLFENMPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRA 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V G+ G ++ M+ + + G + + KV + M D V W
Sbjct: 176 GLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAM 235
Query: 125 LIVAYANNGDMESAGGLFNEL 145
++ A +G E + N L
Sbjct: 236 VLCACRIHGLAELGEKIGNRL 256
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 306/546 (56%), Gaps = 47/546 (8%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+ F + +++ + G L +++ + M EG+ S T ++ C ++ D+ LG Q+
Sbjct: 190 NDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQV 249
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ +L GG T D++VG+ ++ M+ KCG D
Sbjct: 250 HAQ-LLKGGLTFDVFVGSMLVDMFGKCG-------------------------------D 277
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
+ SA +F+ L ++ V WT+++T Y+QN + E + M G ++ T +++A
Sbjct: 278 VLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNA 337
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
A + +++ + + E G N V+VG+ALI+MYSKCG ID +Y +F M+ R++
Sbjct: 338 FAGMAALRHGDLLHARVEKLGIK--NRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDII 395
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
++++MI G++ HG A+ LF DM+ PN VTF+GVL+AC+H+ L
Sbjct: 396 TWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQL 455
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
K + V P +HY C+V +L RAG LEEA + V+ + W LL AC IHRN +
Sbjct: 456 MKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNL 515
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
A + +++P +G Y +LSN+YA A WD V+ +R++++ +KK PG SW+E R
Sbjct: 516 GTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIE-IR 574
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
+H F + HP +I + LL+ ++ GY PN+ +VL+DV DE+K+ L HSE
Sbjct: 575 NAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSE 634
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+A+GL+ A +R++KNLRICEDCH + S+V R I+VRD RFHHF+DG C
Sbjct: 635 KLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTC 694
Query: 543 SCGNYW 548
+C ++W
Sbjct: 695 TCTDHW 700
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF+ ++ +N +WT+L+ Y+ G +++++L M REG FT + L A
Sbjct: 281 ARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAG 340
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ + G +HA+ L G + + VGN +I MY KCG + S VF +M RD+++W
Sbjct: 341 MAALRHGDLLHARVEKL-GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNA 399
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I GY Q+ ++A+ F+ M AG +
Sbjct: 400 MI-------------------------------CGYSQHGLGKQALLLFQDMLSAGECPN 428
Query: 185 YVTLVGVISACAQLGVIK 202
+VT VGV+SACA L ++
Sbjct: 429 HVTFVGVLSACAHLALVN 446
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 50/344 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R +F+++ ++ + L+ GY+ G + + L+ +M P + + + AC
Sbjct: 73 LARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACA 132
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V G Q H + G +V ++++ MY KC + + +V +
Sbjct: 133 HSGRVFEGMQCHG-FLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLE----------- 180
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ +G++++ D + +++ V++ + EA+E RM GV
Sbjct: 181 ------SEHGNIDNDN---------DAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVW 225
Query: 184 DYVTLVGVISACAQ-----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D VT V V+ C Q LG+ +A ++ +G G +V VGS L+DM+ KCG +
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHA----QLLKG---GLTFDVFVGSMLVDMFGKCGDV 278
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
A ++F G++ RNV ++S++ + +G + L M + T N TF +L A
Sbjct: 279 LSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAF 338
Query: 299 S-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEA 331
+ H ++ G+ ++++ + GC++ +
Sbjct: 339 AGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSS 382
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 134/310 (43%), Gaps = 57/310 (18%)
Query: 67 DVSLGQQIHAQTILLGGFTS-------DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
+++ G+ IH Q ++ ++ ++ N++I +YVKC L +R +FDEM R V
Sbjct: 27 NLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSV 86
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VS+ L+ GY+ + + E ++ F+ M +
Sbjct: 87 VSYNVLM-------------------------------GGYLHSGEHLEVVKLFKNMVSS 115
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ + V+SACA G + + C FG + + V S+L+ MYSKC +D
Sbjct: 116 LYQPNEYVFTTVLSACAHSGRV-FEGMQCH-GFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 240 DAYRIFVGM-----KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
A ++ + F Y+S++ GR A+++ G MV + VT++ V
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 295 LTACSHV-----GLKCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
+ C + GL+ + G++ + +VD+ G+ G + A K+ + + N
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ-NRN 292
Query: 344 GGVWGALLGA 353
VW +L+ A
Sbjct: 293 VVVWTSLMTA 302
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 313/563 (55%), Gaps = 40/563 (7%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKA-CTEV 65
+F + F++ LIR S+ + + R + P SF+ + K +
Sbjct: 67 LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G Q+H+ GF ++VG T+I MY +CG +RKVFDEM + +VV+W +
Sbjct: 127 CSKRQGIQLHSHA-FRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAV 185
Query: 126 IVAYANNGDMESAGG-------LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
+ A G G +F E+ ++D +W+ M+ G+ ++ +A +F+ +
Sbjct: 186 VTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLR 245
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V+L GV+SACAQ G ++ + E +GF I V V +ALID YSKCG++
Sbjct: 246 DRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCI--VSVNNALIDTYSKCGNV 303
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
D A +F + AMHGRA AI++F +M ++ +P+GVTFI +L AC
Sbjct: 304 DMAKLVFN--------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYAC 349
Query: 299 SHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
SH GL YG+ P+ +HY CMVDL GRA L++A + + +MP+ PN +
Sbjct: 350 SHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVII 409
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LLGAC IH N E+A++ L E++P+ G++++LSN+YA AG W DV+ +RR +
Sbjct: 410 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIE 469
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRL-QADGYQPNLRSVL 465
+KK PG+S +E D+ V + F AG+ + + E L +++ RL + +GY P +RSVL
Sbjct: 470 QSMKKIPGWSMIEIDK-VNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVL 528
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV +EEK+ + HSEKLA AFG+ G +RI+KNLR+C DCH M S+V E
Sbjct: 529 HDVEEEEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVE 588
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I+VRD RFH F+ G CSC +YW
Sbjct: 589 IIVRDRSRFHSFKGGFCSCRDYW 611
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF ++K ++ W+ +I G+ G D+ + + R+ P +L+ + AC +
Sbjct: 207 VVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAG 266
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR-----------------K 109
G+ +H + GF + V N +I Y KCG + ++ +
Sbjct: 267 AFEFGKILHG-FMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFNISLAMHGRADEAIR 325
Query: 110 VFDEMPER----DVVSWTELIVAYANNGDMESAGGLFNEL-------PLKDKVAWTAMVT 158
VF EM E D V++ L+ A +++G +E LF+++ P + + MV
Sbjct: 326 VFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEH--YGCMVD 383
Query: 159 GYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
Y + A+ ++A E+ +M + TL+G AC+ G I+ A V
Sbjct: 384 LYGRAARLQKAYEFIRQMPILPNVIIWRTLLG---ACSIHGNIELAELV 429
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 311/555 (56%), Gaps = 47/555 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + ++ WT ++ G G +++ ++ MR EG+G +T ++ AC +
Sbjct: 235 RGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGAL 294
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+QIHA TI + +++VG+ ++ MY KC + + VF M ++++S
Sbjct: 295 AASEEGKQIHAYTIRTL-YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIIS---- 349
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
WTAM+ GY QN EA+ F MQ G++ +
Sbjct: 350 ---------------------------WTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPND 382
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VIS+CA L ++ +A SG P + V SAL+ +Y KCGSI+DA+R+F
Sbjct: 383 FTLGSVISSCANLASLEEGAQFHCMALVSGLRPY--ITVSSALVTLYGKCGSIEDAHRLF 440
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M + SY++++ G+A G+A I LF M+ KPNGVTFIGVL+ACS GL
Sbjct: 441 DEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVE 500
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ +G+ DHY CM+DL R+G L+EA + + +MP P+ W LL A
Sbjct: 501 KGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++ + EI + AA +L + +P +Y++L +++AS G W +V+ +RR ++ +KK P
Sbjct: 561 CRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEP 620
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F A D +HP S I + L L ++ +GY+P++ SVL+DV+D EK
Sbjct: 621 GCSWIKY-KNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEK 679
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+L HSEKLA+AFGL+ +R++KNLR+C DCH S++ GR+I+VRD +R
Sbjct: 680 VHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVR 739
Query: 534 FHHFQDGKCSCGNYW 548
FH F +G CSCG++W
Sbjct: 740 FHKFSNGICSCGDFW 754
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 196/397 (49%), Gaps = 22/397 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-------IGPVSFTLSALFK 60
+F + ++ + ALI G+ G + Y ++ RE + P T+S +
Sbjct: 98 LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + + D +LG+Q+H Q + LG F + + + ++ MY K G +G +++VFDEM ++VV
Sbjct: 158 AASALGDRALGRQVHCQIMRLG-FGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVV 216
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+ +I +E A G+F + +D + WT MVTG QN EA++ F RM+ G
Sbjct: 217 MYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEG 276
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V D T +++AC L + + + + N+ VGSAL+DMYSKC SI
Sbjct: 277 VGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYD--GNIFVGSALVDMYSKCRSIRL 334
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M +N+ S+++MI+G+ +G A+++F +M KPN T V+++C++
Sbjct: 335 AEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCAN 394
Query: 301 VG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ C G+ P + +V L G+ G +E+A ++ ++MP
Sbjct: 395 LASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTAL 454
Query: 350 LLGACQIHRNPEIAQIAANHLFE-LEPDKIGNYIILS 385
+ G Q + E + L + ++P+ + +LS
Sbjct: 455 VSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLS 491
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 15/224 (6%)
Query: 89 YVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK 148
YV N ++ Y + G L +R++FD MP+ ++ + L+ A A+ + LF +P +
Sbjct: 46 YVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQR 105
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERM-------QYAGVETDYVTLVGVISACAQLGVI 201
D V++ A++ G+ P A + + A V +T+ G++ A + LG
Sbjct: 106 DAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDR 165
Query: 202 KYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMI 260
V C+I GFG S L+DMY+K G I DA R+F M +NV Y++MI
Sbjct: 166 ALGRQVHCQIMR-LGFGAY--AFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMI 222
Query: 261 LGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
G A +F MV ++ +T+ ++T + GL+
Sbjct: 223 TGLLRCKMVEEARGVFEAMVDRDS----ITWTTMVTGLTQNGLQ 262
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 274/443 (61%), Gaps = 15/443 (3%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DVVSWT ++ G ++ A +F+ +P ++ V+W +M++GYV+ + +A+E F+ M+
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GVE + + AC G + + E SG + + +A++DMY KCG
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIE--VDAKLATAVVDMYCKCGC 280
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D+A+R+F + R + +++ MI GFA+HGR A++LF M P+ VT + VLTA
Sbjct: 281 VDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTA 340
Query: 298 CSHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+H G + +G+ P +HY CMVDL GRAG L+EA K++++MP++P+
Sbjct: 341 CAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA 400
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
V GALLGAC+IH + ++ + + +L+PD G Y++L+N+ A AG WD+V +VRRL+
Sbjct: 401 VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMD 460
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
+ K G S +E D G EFR G+L HP + EI D++ R++A+GY P+ L
Sbjct: 461 ERNVSKEAGRSVIEVD-GEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEAL 519
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV++E+K+ L+ HSEKLA+AFGLL P T+RI KNLR+C DCH S+V GRE
Sbjct: 520 HDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGRE 579
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF+DG CSC +YW
Sbjct: 580 IVVRDRSRFHHFKDGMCSCKDYW 602
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N W ++I GY+ D++ ++ MR G+ F ++ ACT
Sbjct: 184 REVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGA 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++I+ + + G D + ++ MY KCG + + +VFD +P R + +W +
Sbjct: 244 GALGRGREIY-RWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCM 302
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I +A +G + +A+E F +M+ AGV D
Sbjct: 303 IGGFAVHGRCD-------------------------------DALELFHQMEAAGVAPDD 331
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTL+ V++ACA G + ++ I G P ++D++ + G +D+A ++
Sbjct: 332 VTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHY--GCMVDLFGRAGQLDEAKKV 389
Query: 245 FVGMKQRNVFSYSSMILG 262
M + +LG
Sbjct: 390 IDEMPMDPDLAVLGALLG 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + + W +I G+ + G D++ L+ M G+ P TL + AC +
Sbjct: 287 VFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGE 346
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
VS G++ + G M+ ++ + G L ++KV DEMP + D+ L+
Sbjct: 347 VSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALL 406
Query: 127 VAYANNGDME 136
A +GD++
Sbjct: 407 GACKIHGDVD 416
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/373 (47%), Positives = 246/373 (65%), Gaps = 15/373 (4%)
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ G++ ACA + ++ V GF +V V + L+DMY KCG I+DA +F
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFEL--DVSVSNGLVDMYGKCGRIEDAQEVFSK 58
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ + +V S+++MI G A HG A+ LF M++T KPN +TF+ VL+ CSH GL
Sbjct: 59 LLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEG 118
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ +G+SP +HY+CMVDL GRAGCL+EAL + +MPVEPN VWG+LLGAC+
Sbjct: 119 RNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACR 178
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+H N E+A+ A L EL P+ G Y++LSNIYA+AG WDD +VR+++K +KK PG
Sbjct: 179 VHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGC 238
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E V H F GD +HP EI + L L +++A GY PN VL+DV +E+K+
Sbjct: 239 SWIEVQNKV-HPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEW 297
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
IL HSEKLA+AFG+++T PG T+R++KNLR+C DCH S+++ REIV+RD RFH
Sbjct: 298 ILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFH 357
Query: 536 HFQDGKCSCGNYW 548
HF+DG+CSCG+YW
Sbjct: 358 HFKDGQCSCGDYW 370
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 55 LSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
++ + +AC V + G+Q+HA I +G F D+ V N ++ MY KCG
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIG-FELDVSVSNGLVDMYGKCG------------ 47
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
+E A +F++L D +W AM++G Q+ +EA+ FE
Sbjct: 48 -------------------RIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFE 88
Query: 175 RMQYAGVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+M GV+ + +T V V+S C+ G++ N+ + G P S ++D++
Sbjct: 89 QMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHY--SCMVDLFG 146
Query: 234 KCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+ G +D+A M + N + S++ +HG A + +++ T N T++
Sbjct: 147 RAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIEL-TPENPGTYV 205
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 210/547 (38%), Positives = 303/547 (55%), Gaps = 53/547 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A+I +++ L+ M R G+ FT++++ A T V D+ G Q H I
Sbjct: 211 WNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMI 270
Query: 80 LLGGFTSDLYVGNTMIGMYVKC--GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
GF + +VG+ +I +Y KC G + C RKVF+E+ D+V
Sbjct: 271 K-SGFHGNSHVGSGLIDLYSKCAGGMVEC-RKVFEEIAAPDLV----------------- 311
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPRE-AIEYFERMQYAGVETDYVTLVGVISACA 196
W M++G+ Q E I F MQ+ G D + V V SAC+
Sbjct: 312 --------------LWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACS 357
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
L V +A S P N V V +AL+ MYSKCG++ DA R+F M + N+ S
Sbjct: 358 NLSSPSVGKQVHALAIKSDI-PYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL 416
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
+SMI G+A HG +++LF M++ + PN +TFI VL+AC H G +
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
+ + P +HY+CM+DLLGRAG L+EA +++E MP P W LLGAC+ H N E+A
Sbjct: 477 RFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AAN +LEP Y++LSN+YASA W++ + V+RL++ G+KK PG SW+E D+ V
Sbjct: 537 KAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKV 596
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY---DVSDEEKKRILMTHS 481
H F A D +HP EI +G++L +++ GY P++R L +V +EK+R L+ HS
Sbjct: 597 -HVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHS 655
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+AFGL++T + ++KNLRIC DCH + S + GREI VRD RFH F++G
Sbjct: 656 EKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGH 715
Query: 542 CSCGNYW 548
CSCG+YW
Sbjct: 716 CSCGDYW 722
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 23/315 (7%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T L KAC D+ G+ +HA Y+ N +Y KCG L ++ FD
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHA-LYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+V S+ LI AYA + + A +F+E+P D V++ ++ Y + R A+ F
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLF 129
Query: 174 ERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
++ D TL GVI AC +G+++ + + + +NN V+ Y
Sbjct: 130 AEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLAC-----Y 184
Query: 233 SKCGSIDDAYRIFVGMKQ---RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
S+ G +++A R+F M + R+ S+++MI+ H A++LF +MV+ K +
Sbjct: 185 SRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMF 244
Query: 290 TFIGVLTACSHV-----GLKCYGVSPSTDHY------ACMVDLLGR-AGCLEEALKMVEK 337
T VLTA + V G++ +G+ + + + ++DL + AG + E K+ E+
Sbjct: 245 TMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEE 304
Query: 338 MPVEPNGGVWGALLG 352
+ P+ +W ++
Sbjct: 305 IAA-PDLVLWNTMIS 318
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 165/355 (46%), Gaps = 61/355 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + + LI Y +G + ++ L+ +R G FTLS + AC +
Sbjct: 95 RQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGD- 153
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE---RDVVSW 122
DV L +Q+H +++ G+ V N ++ Y + GFL +R+VF EM E RD VSW
Sbjct: 154 -DVGLVRQLHC-FVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSW 211
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+IVA Q+ + EA+E F M G++
Sbjct: 212 NAMIVACG-------------------------------QHREGLEAVELFREMVRRGLK 240
Query: 183 TDYVTLVGVISA--CAQ--LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GS 237
D T+ V++A C + +G +++ + + SGF N VGS LID+YSKC G
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGMQFHGMMIK----SGFH--GNSHVGSGLIDLYSKCAGG 294
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+ + ++F + ++ +++MI GF+ + + I F +M P+ +F+ V +
Sbjct: 295 MVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTS 354
Query: 297 ACSH-----VGLKCYGVSPSTD-------HYACMVDLLGRAGCLEEALKMVEKMP 339
ACS+ VG + + ++ +D +V + + G + +A ++ + MP
Sbjct: 355 ACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 42/284 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFE++ + LW +I G+ L +D I + M+ G P + + AC+
Sbjct: 299 RKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ S+G+Q+HA I + + V N ++ MY KCG + +R+VFD MPE ++VS
Sbjct: 359 LSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNS 418
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I GY Q+ E++ FE M + +
Sbjct: 419 MI-------------------------------AGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 185 YVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+T + V+SAC G + KY N + E F S +ID+ + G + +
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKE-----RFRIEPEAEHYSCMIDLLGRAGKLKE 502
Query: 241 AYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
A RI M +++++ HG A++ + ++ E
Sbjct: 503 AERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE 546
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + N ++I GY G +S+ L+ M ++ I P + T A+ AC
Sbjct: 402 RRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHT 461
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V GQ+ + + MI + + G L + ++ + MP + W
Sbjct: 462 GKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWAT 521
Query: 125 LIVAYANNGDME---SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A +G++E A F +L + + + Y A+ EA M+ GV
Sbjct: 522 LLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581
Query: 182 E 182
+
Sbjct: 582 K 582
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 305/556 (54%), Gaps = 70/556 (12%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N WTA+I G I G + ++ L+ MR + + P FT SA+ KA +L QI
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQI 422
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ ++ + +VG ++ Y K G + +F + ++DVV+W+ ++ +A GD
Sbjct: 423 HAQ-VIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E A LFN++ +Q KP E T+ VI A
Sbjct: 482 CEGATYLFNKMA--------------IQGIKPNE-----------------FTISSVIDA 510
Query: 195 CAQLGVIKYANWVCEIA---EGSGFGPI-------NNVVVGSALIDMYSKCGSIDDAYRI 244
CA C A +G F I + + V SAL+ MYS+ G+ID A +
Sbjct: 511 CA-----------CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIV 559
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F R++ S++SMI G+A HG + AI+ F M + + +GVTF+ V+ C+H GL
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLV 619
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G ++P+ +HYACMVDL RAG L+E + ++ MP VW LLG
Sbjct: 620 VEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG 679
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H+N E+ + +A+ L LEP Y++LSNIYA+AG W + VR+L+ +KK
Sbjct: 680 ACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKE 739
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW++ + +H F A D +HP S +I + L ++ RL+ DGY PN VL+D+++++
Sbjct: 740 AGCSWIQ-IKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQ 798
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L+ HSE+LALAFGL+ T PG ++I+KNLR+C DCH+ M S + REI++RD
Sbjct: 799 KEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCS 858
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF G CSCG++W
Sbjct: 859 RFHHFNGGACSCGDFW 874
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 35/291 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + KN WT+L+ G + ++L+ MR EGI P FT +++ A
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LGQ++HAQ++ G +S ++V N+++ MY KCG + ++ VF+ M RD+VSW L+
Sbjct: 217 LDLGQRVHAQSVKFGCRSS-VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM- 274
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AG NE L EA++ F + + T
Sbjct: 275 ----------AGLQLNECEL--------------------EALQLFHESRATMGKMTQST 304
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-V 246
VI CA L + A + GF NV+ +AL D YSKCG + DA IF +
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--TALADAYSKCGELADALNIFSM 362
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
RNV S++++I G +G A+ LF M + PN T+ +L A
Sbjct: 363 TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 44/339 (12%)
Query: 27 YILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS 86
Y +G + + + + RR G+ S TLS + KAC V D LG+Q+H + G
Sbjct: 74 YARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
++ G +++ MY+KCG + +VF+ MP+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPK------------------------------ 163
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
K+ V WT+++TG E + F RM+ G+ + T V+SA A G +
Sbjct: 164 -KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQR 222
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V A+ FG ++V V ++L++MY+KCG ++DA +F M+ R++ S+++++ G ++
Sbjct: 223 V--HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHY 315
A+QLF + T K T+ V+ C+ H + +G + +
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ D + G L +AL + N W A++ C
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 36/243 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT-EVL 66
+F+ ++ K+ W+A++ + G + + L+ M +GI P FT+S++ AC
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSA 516
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+Q HA +I + + V + ++ MY + G + ++ VF+ +RD+VSW
Sbjct: 517 GVDQGRQFHAISIKY-RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW---- 571
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+M++GY Q+ +AIE F +M+ +G++ D V
Sbjct: 572 ---------------------------NSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 187 TLVGVISACAQLG-VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T + VI C G V++ + + P + ++D+YS+ G +D+ +
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY--ACMVDLYSRAGKLDETMSLI 662
Query: 246 VGM 248
M
Sbjct: 663 RDM 665
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 142 FNELPLKDK-VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG- 199
+E+P +D V ++ Y + E ++ F + GV D TL V+ AC +
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 200 --VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ + + +C + G G ++ G++L+DMY KCGS+ + +F GM ++NV +++
Sbjct: 115 RVLGEQLHCLC-VKCGHDRGEVS---AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 258 SMILGFAMHGRAHAAIQ-LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--VSPSTDH 314
S++ G A H + H+ + LF M PN TF VL+A + G G V +
Sbjct: 171 SLLTGCA-HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 315 YAC---------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ C ++++ + G +E+A + M + W L+ Q++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN 280
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 6/184 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VFE+ ++ W ++I GY G+ +I + M GI T A+ CT
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHN 616
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V GQQ + + M+ +Y + G L + + +MP + W
Sbjct: 617 GLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRT 676
Query: 125 LIVAYANNGDME----SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
L+ A + ++E SA L + P D + + Y K +E E + M Y
Sbjct: 677 LLGACRVHKNVELGKFSADKLLSLEP-HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRK 735
Query: 181 VETD 184
V+ +
Sbjct: 736 VKKE 739
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 185/496 (37%), Positives = 296/496 (59%), Gaps = 50/496 (10%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
DV LG+ IH+ ++ GF S +YV N+++ +Y CG
Sbjct: 3 DVRLGETIHS-VVIRSGFGSLIYVQNSLLHLYANCG------------------------ 37
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
D+ SA +F+++P KD VAW +++ G+ +N KP EA+ + M G++ D
Sbjct: 38 -------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+V ++SACA++G + V G N+ + L+D+Y++CG +++A +F
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGL--TRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGL-- 303
M +N S++S+I+G A++G AI+LF M TE P +TF+G+L ACSH G+
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +H+ CMVDLL RAG +++A + ++ MP++PN +W LLGA
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C +H + ++A+ A + +LEP+ G+Y++LSN+YAS W DV ++R+ + G+KK P
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 328
Query: 414 GYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G+S +E G+R +HEF GD +HP S I L ++ RL+++GY P + +V DV +EE
Sbjct: 329 GHSLVEVGNR--VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ ++ HSEK+A+AF L++T + + ++KNLR+C DCHL + S+V REIVVRD
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 39/283 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ K+ W ++I G+ G +++++LY M +GI P FT+ +L AC ++
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
++LG+++H I + G T +L+ N ++ +Y +CG + ++ +FDEM +++ VSWT LIV
Sbjct: 105 LTLGKRVHVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYV 186
A NG F +EAIE F+ M+ G+ +
Sbjct: 164 GLAVNG--------FG-----------------------KEAIELFKYMESTEGLLPCEI 192
Query: 187 TLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T VG++ AC+ G++K + + E P + ++D+ ++ G + AY
Sbjct: 193 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEP--RIEHFGCMVDLLARAGQVKKAYEYI 250
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
M Q NV + +++ +HG + A F + + +PN
Sbjct: 251 KSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 291
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 307/561 (54%), Gaps = 51/561 (9%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
MD R VF+++ ++ WT +I G G ++++ +Y M ++ + + L +
Sbjct: 156 MDEAMR-VFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQ 214
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
ACT + +G IH I D+ + DV+
Sbjct: 215 ACTTLGHSKMGLSIHGYMI-----RKDIIM---------------------------DVI 242
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T L+ YA NG +E A +F + K+ ++W+A+++G+ QN A++ MQ G
Sbjct: 243 VQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFG 302
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ D V+LV V+ AC+Q+G +K V I F + V +A+IDMYSKCGS+
Sbjct: 303 YKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHF----DCVSSTAVIDMYSKCGSLS 358
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A +F + R+ S++++I + +HG A+ LF M +T KP+ TF +L+A S
Sbjct: 359 FARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFS 418
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H GL Y + PS HYACMVDLL RAG +EEA +++E M EP +W
Sbjct: 419 HSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIW 478
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
ALL C H I ++AA + EL PD G Y ++SN +A+A WD+V+ VR+++K T
Sbjct: 479 VALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKT 538
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G+KK PGYS +E + G +H F D +H EI Q LG L ++A GY P VL++
Sbjct: 539 GMKKVPGYSVMEVN-GKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHN 597
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ +E K+R+L HSE+LA+AFGLL T PG + I KNLR+C DCH S+++ REIV
Sbjct: 598 LEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIV 657
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF+DG CSCG+YW
Sbjct: 658 VRDVKRFHHFKDGVCSCGDYW 678
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 182/373 (48%), Gaps = 53/373 (14%)
Query: 5 PRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VF++ W A+I Y +G + +++SLY M EG+ P S T + + KACT
Sbjct: 58 ARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTR 117
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
LD+ G++ Q + G+ D++VG ++ +Y KCG
Sbjct: 118 SLDLRSGEETWRQAVD-QGYGDDVFVGAAVLNLYAKCG---------------------- 154
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
M+ A +F+++ +D V WT M+TG QN + REA++ + +M VE D
Sbjct: 155 ---------KMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGD 205
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGF----GPINNVVVGSALIDMYSKCGSIDD 240
V ++G+I AC LG K + G+ I +V+V ++L+DMY+K G ++
Sbjct: 206 GVVMLGLIQACTTLGHSKMGLSI------HGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A +F M +NV S+S++I GFA +G A A+QL DM KP+ V+ + VL ACS
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQ 319
Query: 301 VGL-----KCYGVSPSTDHYAC-----MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
VG +G H+ C ++D+ + G L A + +++ + W A+
Sbjct: 320 VGFLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSIS-WNAI 378
Query: 351 LGACQIHRNPEIA 363
+ + IH + E A
Sbjct: 379 IASYGIHGSGEEA 391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
S +LI +YA G +ESA +F++ P AW AM+ Y + EA+ + RM G
Sbjct: 41 SNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEG 100
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
V D T V+ AC + ++ A G+G ++V VG+A++++Y+KCG +D+
Sbjct: 101 VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYG--DDVFVGAAVLNLYAKCGKMDE 158
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-- 298
A R+F M +R++ +++MI G A +G+A A+ ++ M K + +GV +G++ AC
Sbjct: 159 AMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTT 218
Query: 299 ---SHVGLKCYGVSPSTDHY------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
S +GL +G D +VD+ + G LE A + +M + N W A
Sbjct: 219 LGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRM-LYKNVISWSA 277
Query: 350 LL 351
L+
Sbjct: 278 LI 279
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 303/556 (54%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W A+I G I ++ +SL+ M G P +TL ++F +
Sbjct: 130 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 189
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
VS+GQQIH TI G DL V +++ MY++
Sbjct: 190 RSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMR------------------------- 223
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
NG ++ + +P+++ VAW ++ G QN P + ++ M+ +G +
Sbjct: 224 ------NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 277
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V V+S+C+ L + + AE G + V V S+LI MYSKCG + DA + F
Sbjct: 278 ITFVTVLSSCSDLAIRGQGQQIH--AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 335
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLK 304
+ + +SSMI + HG+ AI+LF M +T + N V F+ +L ACSH GLK
Sbjct: 336 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 395
Query: 305 ------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG P HY C+VDLLGRAGCL++A ++ MP++ + +W LL
Sbjct: 396 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 455
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC IH+N E+AQ + +++P+ Y++L+N++ASA W DVS VR+ ++ +KK
Sbjct: 456 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 515
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW E +G +H+F+ GD + S EI L +L ++ GY+P+ SVL+D+ +EE
Sbjct: 516 AGISWFE-HKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 574
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L+ HSEKLA+AF L+ GA +RI+KNLR+C DCH+ S + REI +RD
Sbjct: 575 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 634
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +GKCSCG+YW
Sbjct: 635 RFHHFINGKCSCGDYW 650
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 165/352 (46%), Gaps = 19/352 (5%)
Query: 53 FTLSALF----KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSR 108
FT ++LF ++CT + G+Q+H +++ GF+SD ++ N ++ MY K G +
Sbjct: 41 FTNTSLFTPFIQSCTTRQSLPSGKQLHC-LLVVSGFSSDKFICNHLMSMYSKLGDFPSAV 99
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
V+ M +++ +S LI Y GD+ +A +F+E+P + W AM+ G +Q E
Sbjct: 100 AVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEE 159
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
+ F M G D TL V S A L + + +G ++VV S+L
Sbjct: 160 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH--GYTIKYGLELDLVVNSSL 217
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
MY + G + D + M RN+ +++++I+G A +G + L+ M + +PN
Sbjct: 218 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 277
Query: 289 VTFIGVLTACSHVGLKCYGVSPSTD-----------HYACMVDLLGRAGCLEEALKMVEK 337
+TF+ VL++CS + ++ G + + ++ + + GCL +A K +
Sbjct: 278 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 337
Query: 338 MPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYA 389
E + +W +++ A H + A N + E +I L+ +YA
Sbjct: 338 REDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 388
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/551 (36%), Positives = 317/551 (57%), Gaps = 49/551 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRR-EGIGPVSFTLSALFKACTEVL 66
+F+++ K+ W A+I GY+ G+ K+++ L+ M + P T+ + AC +
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ LG+ +H+ I GF S+L + N +I +Y K G
Sbjct: 237 SIELGRHVHSW-INDHGFASNLKIVNALIDLYSKFG------------------------ 271
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
++E+A LF+ L KD ++W ++ GY +EA+ F+ M +G + V
Sbjct: 272 -------EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 324
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV-VGSALIDMYSKCGSIDDAYRIF 245
T++ ++ ACA LG I W+ G + NV + ++LIDMY+KCG ID A ++F
Sbjct: 325 TMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF 384
Query: 246 -VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
M R++ ++++MI GFAMHGRA+AA +F M +P+ +TF+G+L+ACSH G+
Sbjct: 385 DSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGML 444
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+ Y ++P +HY CM+DLLG +G +EA +M+ MP+EP+G +W +LL
Sbjct: 445 DLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 504
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N E+ + A L ++EP G+Y++LSNIYA+AG W++V+++R LL G+KK
Sbjct: 505 ACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKK 564
Query: 413 -PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
PG S +E D V+HEF GD HP + EI L ++ L+ G+ P+ VL ++ +E
Sbjct: 565 VPGCSSIEID-SVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEE 623
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
++ L HSEKLA+AFGL++T PG + IMKNLR+C++CH S++ REI+ RD
Sbjct: 624 WREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDR 683
Query: 532 MRFHHFQDGKC 542
RF HF+DG C
Sbjct: 684 TRFXHFRDGVC 694
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 213/413 (51%), Gaps = 23/413 (5%)
Query: 2 DSFPRL--VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALF 59
D FP VF+ ++ N +W + RG+ L ++ LY M G+ P S+T L
Sbjct: 37 DGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLL 96
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
K+C + GQQIH + LG F D+YV ++I MY + G L +RKVFD RDV
Sbjct: 97 KSCAKSKIRKEGQQIHGHVLKLG-FDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF-ERMQY 178
VS+T LI Y + G +ESA LF+E+P KD V+W AM++GYV+ +EA+E F E M
Sbjct: 156 VSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMM 215
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
V D T+V V+SACAQ I+ V GF +N+ + +ALID+YSK G +
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFA--SNLKIVNALIDLYSKFGEV 273
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ A +F G+ ++V S++++I G+ A+ LF +M+++ PN VT + +L AC
Sbjct: 274 ETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 333
Query: 299 SHVGLKCYG--------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
+H+G G V+ + ++D+ + G ++ A ++ + +
Sbjct: 334 AHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSL 393
Query: 345 GVWGALLGACQIH--RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
W A++ +H N + + +EPD I ++ L + + +GM D
Sbjct: 394 STWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI-TFVGLLSACSHSGMLD 445
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 315/559 (56%), Gaps = 65/559 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREG-IGPVSFTLSALFKACTEV 65
VF Q++ N F+W ALIR K +I+LY M +G + T + KAC +
Sbjct: 82 VFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYL 141
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S G+QIHAQ IL GF SD+Y+ N+++ Y C L
Sbjct: 142 FALSEGEQIHAQ-ILKLGFDSDVYINNSLVHFYATCDRL--------------------- 179
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ A G+F+ + + V+W ++ +V+ + A+ F MQ E D
Sbjct: 180 ----------DFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDG 228
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ + +ACA +G + G +N+V++ ++L+DMY KCGS++ A ++F
Sbjct: 229 YTIQSIANACAGMGSL-------------SLGIVNDVLLNTSLVDMYCKCGSLELALQLF 275
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGLK 304
M +R+V S++SMILGF+ HG AA++ FG MV+TE PN +TF+GVL+AC+H GL
Sbjct: 276 HRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLV 335
Query: 305 C------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P +HY C+VDLL RAG ++EAL +V MP+ P+ +W +LL
Sbjct: 336 SEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLD 395
Query: 353 AC-QIHRNPEIAQIAANHLFELEPDKI-GNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
AC + + E+++ A + E E G Y++LS +YASA W+DV VR+L+ G+
Sbjct: 396 ACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVV 455
Query: 411 KNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL-RSVLYDVS 469
K PG S +E D GV HEF AGD +HP + EI AL + +R++ GY P+ ++ + D +
Sbjct: 456 KEPGCSSIEID-GVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDET 514
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
+ K+ L HSE+LA+AFGLL T PG +RI KNLR+C +CH S+V REI+VR
Sbjct: 515 IDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVR 574
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D +RFHHF+DG CSC +YW
Sbjct: 575 DRIRFHHFKDGACSCMDYW 593
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 111/249 (44%), Gaps = 46/249 (18%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
F + VF+++ ++ W +I ++ G +++L+ M++ P +T+ ++ AC
Sbjct: 181 FAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANACA 239
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +SL G +D+ + +++ MY KCG L + ++F MP+RDV SW
Sbjct: 240 GMGSLSL------------GIVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWN 287
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM-QYAGVE 182
+I+ ++ +G++ + A+EYF M + +
Sbjct: 288 SMILGFSTHGEVAA-------------------------------ALEYFGCMVRTEKLM 316
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ +T VGV+SAC G++ ++ + + + L+D+ ++ G ID+A
Sbjct: 317 PNAITFVGVLSACNHGGLVSEGRRYFDVMV-TEYKIKPELEHYGCLVDLLARAGLIDEAL 375
Query: 243 RIFVGMKQR 251
+ M R
Sbjct: 376 DVVSNMPMR 384
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 303/556 (54%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W A+I G I ++ +SL+ M G P +TL ++F +
Sbjct: 45 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 104
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
VS+GQQIH TI G DL V +++ MY++
Sbjct: 105 RSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMR------------------------- 138
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
NG ++ + +P+++ VAW ++ G QN P + ++ M+ +G +
Sbjct: 139 ------NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V V+S+C+ L + + AE G + V V S+LI MYSKCG + DA + F
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIH--AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLK 304
+ + +SSMI + HG+ AI+LF M +T + N V F+ +L ACSH GLK
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 305 ------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG P HY C+VDLLGRAGCL++A ++ MP++ + +W LL
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC IH+N E+AQ + +++P+ Y++L+N++ASA W DVS VR+ ++ +KK
Sbjct: 371 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW E +G +H+F+ GD + S EI L +L ++ GY+P+ SVL+D+ +EE
Sbjct: 431 AGISWFE-HKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 489
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L+ HSEKLA+AF L+ GA +RI+KNLR+C DCH+ S + REI +RD
Sbjct: 490 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 549
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +GKCSCG+YW
Sbjct: 550 RFHHFINGKCSCGDYW 565
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 14/306 (4%)
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ MY K G + V+ M +++ +S LI Y GD+ +A +F+E+P + W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
AM+ G +Q E + F M G D TL V S A L + +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH--GYTI 118
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQ 274
+G ++VV S+L MY + G + D + M RN+ +++++I+G A +G +
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 275 LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD-----------HYACMVDLLG 323
L+ M + +PN +TF+ VL++CS + ++ G + + ++ +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 324 RAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYII 383
+ GCL +A K + E + +W +++ A H + A N + E +I
Sbjct: 239 KCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 384 LSNIYA 389
L+ +YA
Sbjct: 298 LNLLYA 303
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 308/556 (55%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q+ + F + +IRG + L++++ LY M G+ P FT + KAC+ +
Sbjct: 54 IFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGV 113
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G Q+H +G D+ V N++I MY KC
Sbjct: 114 VDEGIQVHGHVFKMG-LEGDVIVQNSLINMYGKC-------------------------- 146
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-VETDYV 186
G++++A +FN + K +W+A++ + E + +M G +
Sbjct: 147 -----GEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEES 201
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAYRI 244
TLV V+SAC LG + G I+ NVVV ++LIDMY K G ++ R+
Sbjct: 202 TLVNVLSACTHLGSPDLGKCI----HGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRV 257
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M ++N +SY+ MI G A+HGR A+++F +M++ P+ V ++GV +ACSH GL
Sbjct: 258 FKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLV 317
Query: 304 ----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+C+ + P+ HY CMVDLLGR G L+EA ++++ M ++PN +W +LL
Sbjct: 318 EEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLS 377
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N EI +IAA +LF L + G+Y++L+N+YA A WDDV+++R L L +
Sbjct: 378 ACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQT 437
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E R V ++F + D + P I + + + +L+ +GY P+ VL DV DEE
Sbjct: 438 PGFSLIEAKRKV-YKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEE 496
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
KK L HS+KLA+AFGL+ TS G+ +RI +NLR+C DCH + S + REI VRD +
Sbjct: 497 KKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREITVRDRL 556
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF++G CSC +YW
Sbjct: 557 RFHHFKNGSCSCKDYW 572
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G M+ A +F ++ + M+ G V + K EA+ + M GVE D T V+
Sbjct: 46 GSMDYACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVL 105
Query: 193 SACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
AC+ LGV+ V G F G +V+V ++LI+MY KCG I +A +F GM +
Sbjct: 106 KACSLLGVVDEGIQV----HGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDE 161
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHVGL----KC 305
++V S+S++I A + + L G M + T + VL+AC+H+G KC
Sbjct: 162 KSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKC 221
Query: 306 -YGV------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH- 357
+G+ + ++D+ ++GCLE+ L++ + M E N + ++ IH
Sbjct: 222 IHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMS-EKNRYSYTVMISGLAIHG 280
Query: 358 RNPEIAQIAANHLFE-LEPDKI 378
R E ++ + + E L PD +
Sbjct: 281 RGKEALKVFSEMIEEGLAPDDV 302
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
++N+V AL +K GS+D A IF + + + F Y++MI G + A+ L+ D
Sbjct: 33 MSNLVATCAL----TKWGSMDYACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVD 88
Query: 279 MVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA-----------CMVDLLGRAGC 327
M++ +P+ T+ VL ACS +G+ G+ + ++++ G+ G
Sbjct: 89 MIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGE 148
Query: 328 LEEALKMVEKMPVEPNGGVWGALLGA 353
++ A + M E + W A++GA
Sbjct: 149 IKNACDVFNGMD-EKSVASWSAIIGA 173
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 307/557 (55%), Gaps = 51/557 (9%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F++ K+ WTA+I Y ++ L M EGI T +L AC +D+
Sbjct: 191 FDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDL 250
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
G H + +G S V T++ +Y KCG + +R+V D M
Sbjct: 251 RNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAM-------------- 296
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
P++ V+WTAM+ Y QN EAI F+ M G E +TL
Sbjct: 297 -----------------PVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITL 339
Query: 189 VGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-- 245
+ V+ +CA LG + + I F ++++ +A+I MY KCG+++ A +F
Sbjct: 340 ISVVDSCAVLGTLSLGKRIHARIRSSPSFS--QSLMLLNAVITMYGKCGNLELAREVFEC 397
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVGL- 303
V ++ R+V ++++MI +A +G AI+LF +M + T+PN VTF+ VL ACSH+G
Sbjct: 398 VPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQL 457
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP-VEPNGGVWGALL 351
+GV P+ DHY C+VDLLGRAG L EA K++ + E + W A L
Sbjct: 458 EQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFL 517
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
ACQ++ + E +Q AA + ELEP+ + ++LSN+YA+ G DV+R+R +K +G+KK
Sbjct: 518 SACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKK 577
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
G SW+E + V HEF D++HP EI L L ++ GY P+ + VL DV +E
Sbjct: 578 FAGRSWIEINNRV-HEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEE 636
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K ++L HSE+LA+A G+++T PG T+R++KNLR+C DCH SQ++GR+I+VRD
Sbjct: 637 KKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDT 696
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHF+DG CSCG+YW
Sbjct: 697 SRFHHFKDGVCSCGDYW 713
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 165/361 (45%), Gaps = 46/361 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+L F ++ N W L+ Y GH + + +L+ M +G+ P + TLS ACT
Sbjct: 87 QLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAA 146
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++LG++++ + I D +V +++I MY +C
Sbjct: 147 RNLALGRKLN-ELIASEALEIDSHVESSLITMYGRCR----------------------- 182
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
++E A F+ P KD V WTAM++ Y N + A+E RM G++
Sbjct: 183 --------EIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGL 234
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V ++ ACA ++ + A G + VV G+ L+++Y KCG +DDA R+
Sbjct: 235 PTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGT-LVNLYGKCGRVDDARRVL 293
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M R S+++MI +A +G A AI LF M +P+ +T I V+ +C+ +G
Sbjct: 294 DAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLS 353
Query: 306 YG--------VSPSTDH----YACMVDLLGRAGCLEEALKMVEKMPVEPNGGV-WGALLG 352
G SPS ++ + G+ G LE A ++ E +P+ V W A++
Sbjct: 354 LGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIR 413
Query: 353 A 353
A
Sbjct: 414 A 414
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V + + + WTA+I Y G+ ++I+L+ M EG P TL ++ +C +
Sbjct: 290 RRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVL 349
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWT 123
+SLG++IHA+ F+ L + N +I MY KCG L +R+VF+ +P R VV+WT
Sbjct: 350 GTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWT 409
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I AYA NG E A LF E+ ++ G G E
Sbjct: 410 AMIRAYAQNGVGEEAIELFQEM----------LIDG--------------------GTEP 439
Query: 184 DYVTLVGVISACAQLGVIKYANW--VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT + V+ AC+ LG ++ A W C + G P + L+D+ + G + +A
Sbjct: 440 NRVTFLSVLCACSHLGQLEQA-WEHFCSMGPDFGVPPAGDHYC--CLVDLLGRAGRLGEA 496
Query: 242 YRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
++ + K + +V + + + +A Q+ GD+ +++ V+
Sbjct: 497 EKLLLRHKDFEADVVCWIAFL----------SACQMNGDLERSQRAAKRVS 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ AY+ +G + A F + L + +W ++ Y QN PR A F M GV +
Sbjct: 73 LVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPN 132
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTL + AC + + E+ ++ V S+LI MY +C I++A R
Sbjct: 133 AVTLSTALLACTAARNLALGRKLNELIASEALEIDSH--VESSLITMYGRCREIEEAERA 190
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F +++V +++MI +A + R A++L M K T++ +L AC+
Sbjct: 191 FDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDL 250
Query: 300 ------HVGLKCYGVSPSTDHYA-CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
H G+ S+ A +V+L G+ G +++A ++++ MPV + W A++
Sbjct: 251 RNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIA 309
Query: 353 A 353
A
Sbjct: 310 A 310
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 221 NVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV 280
N +G+ L+D YSK GS+ A F + N S++ ++ +A +G A LF M
Sbjct: 66 NTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMC 125
Query: 281 KTETKPNGVTFIGVLTACS-----HVGLKCYGVSPS----TDHY--ACMVDLLGRAGCLE 329
+PN VT L AC+ +G K + S D + + ++ + GR +E
Sbjct: 126 SQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIE 185
Query: 330 EALKMVEKMPVEPNGGVWGALLGA 353
EA + ++ P E + W A++ A
Sbjct: 186 EAERAFDRSP-EKDVVCWTAMISA 208
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 312/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + +N W A++ GY G +++I L+ MRR+G+ +T+ +L A V
Sbjct: 177 RQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSV 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G IH G ++ G+ E D T L
Sbjct: 237 GCLQVGTGIH--------------------GFIIRTGY------------ENDKHIKTAL 264
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
+ Y ++ ++ A +F+E+ +KD AWT M+TG+ AI++F +M ++ D
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L+G++S+C+ G ++ V +A + F NN+ VGSA+IDMY+ CG+++DA R
Sbjct: 325 SIALMGILSSCSHSGALQQGRRVHALAIKTCFA--NNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F GM +++V +++MI G M+G AI LF M + P+ TF+ VL ACSH G+
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
K V P+ HYAC++D+LGRAG L+ A + MP +P+ V+ LLG
Sbjct: 443 YEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N ++ + +FE+EP+ G Y++LSN+YA AG W+ V R L+ +KK+
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKD 562
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E ++ I+ F AG+ HP +I+ L L+ +++ GY PN +L DVSD+
Sbjct: 563 PGFSSIEINQE-IYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDM 621
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
KK IL HSEK+A+AFGL+ T P +RI KNLR C+DCH S+V GR +V++D
Sbjct: 622 KKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDAN 681
Query: 533 RFHHFQDGKCSCGNYW 548
RFH FQDG CSC +YW
Sbjct: 682 RFHVFQDGVCSCRDYW 697
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 161/348 (46%), Gaps = 47/348 (13%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ QQIHAQ I+ G T + ++ N+++ YV CG L ++++F P ++VVSWT LI
Sbjct: 36 DLKPLQQIHAQ-IITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI 94
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+G +N EAI+ F M + + V
Sbjct: 95 -------------------------------SGLAKNDCFVEAIDVFREMIMGNFKPNAV 123
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+ V+ A A LG+I+ A V GF NV V +AL+DMYSK G + A ++F
Sbjct: 124 TISSVLPAFANLGLIRIAKSVHCFWVRGGFE--GNVFVETALVDMYSKFGCMGVARQLFE 181
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHV 301
M +RNV ++++++ G++ HG + AI LF M + + T + ++ A C V
Sbjct: 182 SMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 302 GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +G T + ++D+ C+++A ++ +M V+ + W +L
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVK-DVAAWTLMLTGFS 300
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
R+ + A N + ++ K+ + I L I +S + + RR+
Sbjct: 301 SGRHWDRAIKHFNKMLGIQNLKLDS-IALMGILSSCSHSGALQQGRRV 347
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 312/556 (56%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + +N W A++ GY G +++I L+ MRR+G+ +T+ +L A V
Sbjct: 177 RQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSV 236
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ +G IH G ++ G+ E D T L
Sbjct: 237 GCLQVGTGIH--------------------GFIIRTGY------------ENDKHIKTAL 264
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ-YAGVETD 184
+ Y ++ ++ A +F+E+ +KD AWT M+TG+ AI++F +M ++ D
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ L+G++S+C+ G ++ V +A + F NN+ VGSA+IDMY+ CG+++DA R
Sbjct: 325 SIVLMGILSSCSHSGALQQGRRVHALAIKTCFA--NNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F GM +++V +++MI G M+G AI LF M + P+ TF+ VL ACSH G+
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 305 CYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G+ P+ HYAC++D+LGRAG L+ A + MP +P+ V+ LLG
Sbjct: 443 YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+IH N ++ + +FE+EP+ G Y++LSN+YA AG W+ V R L+ LKK+
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKD 562
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E ++ I+ F AG+ HP +I+ L L+ +++ GY PN +L DVSD+
Sbjct: 563 PGFSSIEINQE-IYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDM 621
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
KK IL HSEK+A+AFGL+ T PG +RI KNLR C DCH S+V GR +V++D
Sbjct: 622 KKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDAN 681
Query: 533 RFHHFQDGKCSCGNYW 548
RFH FQDG CSC +YW
Sbjct: 682 RFHVFQDGVCSCRDYW 697
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 47/348 (13%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+ QQIHAQ I+ G T + ++ N+++ YV CG L ++++F
Sbjct: 36 DLKPLQQIHAQ-IITSGLTHNTFLSNSLMNAYVYCGLLADAKQIF--------------- 79
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+ P K+ V+WT +++G +N EAI+ F M + + V
Sbjct: 80 ----------------HHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAV 123
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+ V+ A A LG+I+ A V GF NV V +AL+DMYSK G + A ++F
Sbjct: 124 TISSVLPAFANLGLIRIAKSVHCFWVRGGFE--GNVFVETALVDMYSKFGCMGVARQLFE 181
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA-----CSHV 301
M +RNV S+++++ G++ HG + AI LF M + + T + ++ A C V
Sbjct: 182 SMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 302 GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G +G T + ++D+ C+++A ++ +M V+ + W +L
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVK-DVAAWTLMLTGFS 300
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
R+ + A N + ++ K+ + I+L I +S + + RR+
Sbjct: 301 SGRHWDRAIKHFNKMLGIQNLKLDS-IVLMGILSSCSHSGALQQGRRV 347
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 303/556 (54%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + W A+I G I ++ +SL+ M G P +TL ++F +
Sbjct: 43 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 102
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
VS+GQQIH TI G DL V +++ MY++
Sbjct: 103 RSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMR------------------------- 136
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
NG ++ + +P+++ VAW ++ G QN P + ++ M+ +G +
Sbjct: 137 ------NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 190
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V V+S+C+ L + + AE G + V V S+LI MYSKCG + DA + F
Sbjct: 191 ITFVTVLSSCSDLAIRGQGQQIH--AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 248
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLK 304
+ + +SSMI + HG+ AI+LF M +T + N V F+ +L ACSH GLK
Sbjct: 249 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 308
Query: 305 ------------CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG P HY C+VDLLGRAGCL++A ++ MP++ + +W LL
Sbjct: 309 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 368
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC IH+N E+AQ + +++P+ Y++L+N++ASA W DVS VR+ ++ +KK
Sbjct: 369 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 428
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW E +G +H+F+ GD + S EI L +L ++ GY+P+ SVL+D+ +EE
Sbjct: 429 AGISWFE-HKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 487
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ L+ HSEKLA+AF L+ GA +RI+KNLR+C DCH+ S + REI +RD
Sbjct: 488 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 547
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF +GKCSCG+YW
Sbjct: 548 RFHHFINGKCSCGDYW 563
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 97 MYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM 156
MY K G + V+ M +++ +S LI Y GD+ +A +F+E+P + W AM
Sbjct: 1 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60
Query: 157 VTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGF 216
+ G +Q E + F M G D TL V S A L + + +
Sbjct: 61 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH--GYTIKY 118
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G ++VV S+L MY + G + D + M RN+ +++++I+G A +G + L+
Sbjct: 119 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 178
Query: 277 GDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD-----------HYACMVDLLGRA 325
M + +PN +TF+ VL++CS + ++ G + + ++ + +
Sbjct: 179 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 238
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
GCL +A K + E + +W +++ A H + A N + E +I L+
Sbjct: 239 GCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 297
Query: 386 NIYA 389
+YA
Sbjct: 298 LLYA 301
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 308/554 (55%), Gaps = 50/554 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ KN WT +I G ++++L+ +M R I S T + + AC
Sbjct: 181 LFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPA 240
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+G Q+H I+ GF + YV ++I +Y C SRKV
Sbjct: 241 FHMGTQVHG-FIIKSGFLYEEYVTASLITLYANCKRTEDSRKV----------------- 282
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
F E+ + WTA+++GY N K +A+ F M + + T
Sbjct: 283 --------------FGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQST 328
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+++C+ LG + + + +A G G + VG++L+ MYS G+++DA +F+
Sbjct: 329 FASGLNSCSALGTLDWGKEIHGVAVKLGLGTV--AFVGNSLVVMYSDSGNVNDAVSVFIE 386
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
+ ++++ S++S+I+G A HGR A +FG M++ +P+ +TF G+L+ACSH G G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKG 446
Query: 308 -------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ HY CMVD+LGR G L+EA K++E M V+PN VW ALL AC
Sbjct: 447 RKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSAC 506
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H + + + AA +F L+ Y++LSNIYASAG W VS++R +K G+ K PG
Sbjct: 507 RMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPG 566
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+ RG HEF +GD P+ I + L L ++L+ GY P+ RS L+DV DE+K+
Sbjct: 567 SSWVV-IRGKKHEFFSGD--RPHCLRIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKE 623
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSE+LA+AFGL+ T G+TV +MKNLR+CEDCH + S+V+G +IV+RD RF
Sbjct: 624 EMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRF 683
Query: 535 HHFQDGKCSCGNYW 548
HHF++G CSCG+YW
Sbjct: 684 HHFKNGMCSCGDYW 697
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 145/302 (48%), Gaps = 11/302 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+QV + L+T +I GY L D+++L+ M + + +++ C E
Sbjct: 55 REVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDV----VSWNSMISGCVEC 110
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D+ ++ + + M+ + G + + ++F +MP +D+ +W +
Sbjct: 111 GDIDTAVKMFDEMP-----ERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAM 165
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ Y G ++ A LF ++P K+ ++WT M+ G QN + EA+ F+ M +++
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTS 225
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T VI+ACA V SGF + V ++LI +Y+ C +D+ ++F
Sbjct: 226 RTFTCVITACANAPAFHMGTQVHGFIIKSGF--LYEEYVTASLITLYANCKRTEDSRKVF 283
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M V +++++ G++++ + A+ +F +M++ PN TF L +CS +G
Sbjct: 284 GEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLD 343
Query: 306 YG 307
+G
Sbjct: 344 WG 345
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF ++ ++ +WTAL+ GY L +D+++++ M R I P T ++ +C+ +
Sbjct: 280 RKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSAL 339
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH + L G + +VGN+++ MY G + + VF E+ ++ +VSW +
Sbjct: 340 GTLDWGKEIHGVAVKL-GLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSI 398
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
IV G Q+ + + A F +M E D
Sbjct: 399 IV-------------------------------GCAQHGRGKWAFVIFGQMIRLNKEPDE 427
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVG-SALIDMYSKCGSIDDAYRI 244
+T G++SAC+ G ++ + SG I+ + + ++D+ +CG + +A ++
Sbjct: 428 ITFTGLLSACSHCGFLQKGRKLFYYI-SSGLNHIDRKIQHYTCMVDILGRCGELKEAEKL 486
Query: 245 FVGM 248
M
Sbjct: 487 IESM 490
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 321/553 (58%), Gaps = 51/553 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ + + + + AL+RG H +++ ++ + P + T S A L
Sbjct: 60 IHRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALA 115
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S QIH+ +L G +D+ +G T+I
Sbjct: 116 LSETSQIHSH-LLRRGCHADILLGTTLID------------------------------- 143
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA GD++SA +F+E+PL+D AW A++ G Q +K EA+ F RM+ G + + ++
Sbjct: 144 AYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEIS 203
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++G ++AC+QLG ++ V NV V +A+IDMY+KCG D +R+F
Sbjct: 204 VLGALAACSQLGALRAGEGVHACVRKMDLDI--NVQVCNAVIDMYAKCGFADKGFRVFST 261
Query: 248 MK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M ++V ++++MI+ FAMHG A++LF +M KT+ + + VT++ VL AC+H GL
Sbjct: 262 MTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEE 321
Query: 304 --KCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + GV+ + HY +VDLLGRAG L EA +++ MP+ P+ +W +LLGAC+
Sbjct: 322 GVRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGACK 381
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+ N E+A++A+ L E+ + G++++LSN+YA+ W+DV RVR +K ++K PG+
Sbjct: 382 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGF 441
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
S++E + GVIH+F GD +HP+ EI L ++ R++A GY VL+D+ +E+K+
Sbjct: 442 SYIEVE-GVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKEN 500
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++TS G +R+ KNLRIC DCH+ + S++ +EI+VRD RFH
Sbjct: 501 ALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIYDQEIIVRDRARFH 560
Query: 536 HFQDGKCSCGNYW 548
F+DG CSC +YW
Sbjct: 561 RFKDGSCSCRDYW 573
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+DS R VF+++ ++ W ALI G ++++L+ MR EG ++
Sbjct: 151 LDSAQR-VFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALA 209
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDV 119
AC+++ + G+ +HA + ++ V N +I MY KCGF +VF M + V
Sbjct: 210 ACSQLGALRAGEGVHA-CVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSV 268
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
V+W +I+A+A +GD A+E FE M
Sbjct: 269 VTWNTMIMAFAMHGD-------------------------------GCRALELFEEMGKT 297
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
VE D VT + V+ AC G+++ V E G G NV +++D+ + G +
Sbjct: 298 QVEMDSVTYLAVLCACNHAGLVEEG--VRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLG 355
Query: 240 DAYRIFVGM 248
+AYRI M
Sbjct: 356 EAYRIINSM 364
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 320/562 (56%), Gaps = 34/562 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTEVL 66
+F Q+K +N W+ L+ Y GHL + + M +R+ I F A T VL
Sbjct: 223 LFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIA---------FTAMTAVL 273
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT--- 123
G+ A+ +L D+ N ++ Y + G L R++F M R V +
Sbjct: 274 S-DQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAG 332
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
L+ Y G ++ A + + +P++ V+WTAM+ Y QN EAI F+ M G E
Sbjct: 333 TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEP 392
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+TL+ V+ +CA LG + + I F ++++ +A+I MY KCG+++ A
Sbjct: 393 SDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFS--QSLMLLNAVITMYGKCGNLELAR 450
Query: 243 RIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACS 299
+F V ++ R+V ++++MI +A +G AI+LF +MV T+PN VTF+ VL+ACS
Sbjct: 451 EVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACS 510
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP-VEPNGGV 346
H+G +GV P+ DHY C+VDLLGRAG L EA K++ + E +
Sbjct: 511 HLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVC 570
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W A L ACQ++ + E +Q AA + ELEP+ + ++LSN+YA+ G DV+R+R +K
Sbjct: 571 WIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKS 630
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+G+KK G SW+E + V HEF D++HP EI L L ++ GY P+ + VL
Sbjct: 631 SGVKKFAGRSWIEINNRV-HEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLR 689
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +E+K ++L HSE+LA+A G+++T PG T+R++KNLR+C DCH SQ++GR+I
Sbjct: 690 DVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQI 749
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD RFHHF+DG CSCG+YW
Sbjct: 750 IVRDTSRFHHFKDGVCSCGDYW 771
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 49/291 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V + + + WTA+I Y G+ ++I+L+ M EG P TL ++ +C +
Sbjct: 348 RRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVL 407
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWT 123
+SLG++IHA+ F+ L + N +I MY KCG L +R+VF+ +P R VV+WT
Sbjct: 408 GTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWT 467
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I AYA NG E A LF E+ + G E
Sbjct: 468 AMIRAYAQNGVGEEAIELFQEMVID------------------------------GGTEP 497
Query: 184 DYVTLVGVISACAQLGVIKYANW--VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ VT + V+SAC+ LG ++ A W C + G P + L+D+ + G + +A
Sbjct: 498 NRVTFLSVLSACSHLGQLEQA-WEHFCSMGPDFGVPPAGDHYC--CLVDLLGRAGRLGEA 554
Query: 242 YRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
++ + K + +V + + + +A Q+ GD+ +++ V+
Sbjct: 555 EKLLLRHKDFEADVVCWIAFL----------SACQMNGDLERSQRAAKRVS 595
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 59/357 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF +V+ N + W+ +I+ Y+ + D+ +L+ SM
Sbjct: 62 RAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSM---------------------- 99
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTE 124
GF D + N MI Y + L +R++F M RDVVSW
Sbjct: 100 ----------------PGF--DAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAI 141
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
L+ YA + +E A LF +PL D V T+++ GY N EA E F+R+ AG + D
Sbjct: 142 LVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAG-DRD 200
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAY 242
+I+A + N ++AEG F I N S L+ Y++ G +D A
Sbjct: 201 ATACNAMIAAYGK-------NARVDLAEGL-FAQIKLRNAASWSLLLLTYAQNGHLDLAK 252
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG-----DMVKTETKPNGVTFIGVLTA 297
+ F M QR+ ++++M + G A ++ D++ G + G L
Sbjct: 253 KSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDE 312
Query: 298 CSHVGLKCYGVSPSTDHYA-CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ + +T A +V+L G+ G +++A ++++ MPV + W A++ A
Sbjct: 313 VRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAA 368
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 44/253 (17%)
Query: 69 SLGQQIHAQTILLGGFTSDLY-----VGNTMIGMYVKCGFLGCSRKV------------- 110
++G+++H IL + + N +I ++ KCG +R V
Sbjct: 18 AIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWS 77
Query: 111 ------------------FDEMPERDVVSWTELIVAYANNGDMESAGGLFNEL-PLKDKV 151
FD MP D +W +I AYA ++ A LF+ + +D V
Sbjct: 78 CIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVV 137
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+W +V GY ++ + EA F RM D VT V+ A G + A + +
Sbjct: 138 SWAILVAGYARHDRLEEASALFRRMPL----WDTVTCTSVLQGYAHNGHLAEAQELFDRI 193
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
G+G + +A+I Y K +D A +F +K RN S+S ++L +A +G
Sbjct: 194 GGAG---DRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDL 250
Query: 272 AIQLFGDMVKTET 284
A + F M + ++
Sbjct: 251 AKKSFDRMPQRDS 263
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 293/508 (57%), Gaps = 40/508 (7%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P + +LS KA D Q+HA + LG +D+ + T++ Y KCG L +RK
Sbjct: 109 PDALSLSFALKASARCSDAHTTVQLHALVLRLG-VAADVRLLTTLLDSYAKCGDLASARK 167
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFDEM RDV +W L+ A + A LF+ L Q RE
Sbjct: 168 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL------------ANSFQELPSRE- 214
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALI 229
E + VT+V +SACAQ+G++K +V E A+ FG NV V ++LI
Sbjct: 215 ------------EPNEVTIVAALSACAQIGLLKDGMYVHEFAK--RFGLDRNVRVCNSLI 260
Query: 230 DMYSKCGSIDDAYRIFVGMK--QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPN 287
DMYSKCGS+ A +F +K + + SY++ I +MHG A++LF +M T +P+
Sbjct: 261 DMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEPD 319
Query: 288 GVTFIGVLTACSHVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
GVT++ VL C+H GL G V+P+ HY +VDLLGRAG L EA V MP
Sbjct: 320 GVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMP 379
Query: 340 VEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSR 399
+ +W LLGA ++H E+A++AAN L EL + G+Y++LSN+YAS W DV R
Sbjct: 380 FPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGR 439
Query: 400 VRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQP 459
VR ++ ++K PG+S+ E D GV+H+F GD HP EI +AL D++ R+ GY+P
Sbjct: 440 VRDTMRSNDVRKVPGFSYTEID-GVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEP 498
Query: 460 NLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGAS 519
+VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+R++KNLRIC DCH+ S
Sbjct: 499 ETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLIS 558
Query: 520 QVIGREIVVRDNMRFHHFQDGKCSCGNY 547
+ GR IV+RD RFH F+DG+CSC +Y
Sbjct: 559 KAYGRVIVIRDRARFHRFEDGQCSCRDY 586
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 311/556 (55%), Gaps = 48/556 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K+ W A+I + +D++ L+ M EG+ FTL +L +AC + D
Sbjct: 98 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 157
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L +QIHA+ G + VGN+++ MY +CG L ++K FD + E+ +V
Sbjct: 158 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLV------- 210
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ--NAKPREAIEYFERMQYAGVETDY 185
AW+ M+ Y Q + R A ++F+ M+ G++
Sbjct: 211 ------------------------AWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGE 246
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V + ACA + +++ + A SGF ++V+G+ +I+MY KCGS DA +F
Sbjct: 247 VTFVSALDACAAMATLEHGRSMHRRAAASGFVE-TSLVLGNTIINMYGKCGSPSDAKLVF 305
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++ + S++S+I+ +A +G A A+ +M+ P+ T + +L SH GL
Sbjct: 306 DQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLE 365
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV-EPNGGVWGALLG 352
+ +G+ PS+ C+VDLL R G L+ A +++ P + + W LL
Sbjct: 366 RGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLA 425
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ + +P+ A +FELEP G++++L+N+YAS G W D SR+R++++ +KK
Sbjct: 426 ACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKE 485
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E G +HEF +G+ HP EI + L L R++ GY P+ +V++DV + +
Sbjct: 486 PGCSWIELS-GSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHDVEEGD 544
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ IL HSE+LA+ FGL++T PG T+R++KNLR+C DCH S V+GREIVVRD+
Sbjct: 545 KEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSS 604
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G+CSCG++W
Sbjct: 605 RFHHFKHGQCSCGDFW 620
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 192/388 (49%), Gaps = 19/388 (4%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
M+ EG P AC ++ G+QIH+ +++ G TS++ + N+++ MY KC
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHS-SVVDSGLTSNIIISNSLVNMYGKCQ 59
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
+ C+ KVFD M RDVVSWT ++ YA NG A +F +P KD V+W A++ V
Sbjct: 60 DVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVG 119
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N+K ++A+E F M+ G+ ++ TL+ ++ AC L +K A + +G N+
Sbjct: 120 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQI-HARAAAGGFGGNST 178
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH--GRAHAAIQLFGDMV 280
VG+++++MY++CGS+ D + F ++++ + ++S M+ +A G A + F +M
Sbjct: 179 AVGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEME 238
Query: 281 KTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYA------------CMVDLLGRAGCL 328
KP VTF+ L AC+ + +G S A ++++ G+ G
Sbjct: 239 AEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSP 298
Query: 329 EEALKMVEKMPVEPNGGVWGALLGACQI--HRNPEIAQIAANHLFELEPDKIGNYIILSN 386
+A + ++MP E W +L+ A H ++ + L +PD + IL
Sbjct: 299 SDAKLVFDQMP-EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG 357
Query: 387 IYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+ + + V R ++ GL+ + G
Sbjct: 358 LSHAGLLERGVEHFRSSIQDHGLEPSSG 385
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +LVF+Q+ K W +LI Y GH +++S M +G P S T ++
Sbjct: 299 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 358
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVV 120
+ + G + +I G ++ + + GFL + ++ P + D +
Sbjct: 359 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 418
Query: 121 SWTELIVAYANNGD 134
+W L+ A + GD
Sbjct: 419 AWMTLLAACKSYGD 432
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 300/555 (54%), Gaps = 50/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K+ WTA+I GY G ++++ + M E + L + AC +
Sbjct: 98 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 157
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ +H+ + LG F SD++VGN + MY K G
Sbjct: 158 CKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG------------------------- 191
Query: 128 AYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
DMESA +F + ++ V++T ++ GYV+ + + + F ++ G+E +
Sbjct: 192 ------DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 245
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +I ACA ++ + F + V S L+DMY KCG ++ A + F
Sbjct: 246 TFSSLIKACANQAALEQGTQLHAQVMKINFD--EDPFVSSILVDMYGKCGLLEQAIQAFD 303
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ +++S++ F HG AI++F MV KPN +TFI +LT CSH GL
Sbjct: 304 EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE 363
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K YGV P +HY+C++DLLGRAG L+EA + + +MP EPN W + LGAC
Sbjct: 364 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 423
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH + E+ ++AA L +LEP G ++LSNIYA+ W+DV VR ++ +KK PG
Sbjct: 424 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 483
Query: 415 YSWLEGDRGV-IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
YSW+ D G H F A D +HP + I + L LLD+++A GY P SV D+ D K
Sbjct: 484 YSWV--DVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMK 541
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L HSE++A+AF L++ G + + KNLR+C DCH + S+V GR+I+VRDN R
Sbjct: 542 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 601
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSCG+YW
Sbjct: 602 FHHFTDGSCSCGDYW 616
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 165/349 (47%), Gaps = 47/349 (13%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N WTA+I G ++I +C MR G P F S+ +AC + + +G+Q+
Sbjct: 4 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
H + G S+L+VG+ + MY KCG + FD
Sbjct: 64 HCLALKFG-IGSELFVGSNLEDMYSKCGAM------FD---------------------- 94
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
A +F E+P KD+V+WTAM+ GY + + EA+ F++M V D L + A
Sbjct: 95 ---ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGA 151
Query: 195 CAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-VGMKQRNV 253
C L K+ V GF +++ VG+AL DMYSK G ++ A +F + + RNV
Sbjct: 152 CGALKACKFGRSVHSSVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 209
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC---------SHVGLK 304
SY+ +I G+ + + +F ++ + +PN TF ++ AC + + +
Sbjct: 210 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269
Query: 305 CYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
++ D + + +VD+ G+ G LE+A++ +++ +P W +L+
Sbjct: 270 VMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLV 317
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 145 LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYA 204
+P ++ V+WTAM++G QN+K EAI F M+ G I ACA LG I+
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 205 NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFA 264
+ +A G G + + VGS L DMYSKCG++ DA ++F M ++ S+++MI G++
Sbjct: 61 KQMHCLALKFGIG--SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 118
Query: 265 MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
G A+ F M+ E + L AC
Sbjct: 119 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 152
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 301/556 (54%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ F + +IRGY+ + +++I LY M + + P +FT + KAC +
Sbjct: 88 IFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAV 147
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIH LG D+YV N++I MY KC
Sbjct: 148 IQEGMQIHGHVFKLG-LEDDVYVQNSLINMYGKCR------------------------- 181
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV-ETDYV 186
D+E + +F + K +W+A++ + A E + FE M G +
Sbjct: 182 ------DIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEES 235
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAYRI 244
LV V+SAC LG A GS I NV V ++L+DMY KCGS+ +
Sbjct: 236 ILVNVLSACTHLGAFHLG----RCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCL 291
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F M ++N SYS +I G +HG A+Q+F +MV+ +P+ VT++ VL+ACSH GL
Sbjct: 292 FQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLV 351
Query: 305 C------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
Y + P+ HY CMVDL GRAG LEEA ++V+ MP++ N +W +LL
Sbjct: 352 DEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLS 411
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N ++ +IAA +LF L +Y++LSN+YA A W++ +++R + GL +
Sbjct: 412 ACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQT 471
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PGYS +E + +++F + D ++ S I + + + +L+ +GY P+ V+ DV +EE
Sbjct: 472 PGYSLVEV-KSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEE 530
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HS+KLA+AF L+ TS G+ +RI++NLR+C DCH + S + REI VRD
Sbjct: 531 KGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRN 590
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 591 RFHHFKDGNCSCRDYW 606
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 22/285 (7%)
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A ++ M+ A +F +L + M+ GYV N AI + M VE D T
Sbjct: 75 ALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFT 134
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ ACA+L VI+ + G F G ++V V ++LI+MY KC I+ + IF
Sbjct: 135 YPVVLKACARLAVIQEGMQI----HGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIF 190
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSHVGLK 304
M+Q++V S+S++I A + LF DM + + + VL+AC+H+G
Sbjct: 191 RRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAF 250
Query: 305 CYG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + ++D+ + G L++ L + + M N + ++
Sbjct: 251 HLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNM-TRKNQLSYSVIISG 309
Query: 354 CQIH-RNPEIAQIAANHLFE-LEPDKIGNYIILSNIYASAGMWDD 396
+H + QI + + E LEPD + Y+ + + + +G+ D+
Sbjct: 310 LGLHGYGRQALQIFSEMVEEGLEPDDV-TYVSVLSACSHSGLVDE 353
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/567 (36%), Positives = 308/567 (54%), Gaps = 57/567 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQG---HLKDSISLYCSMRREGIG---PVSFTLS 56
++ RL+ N + + +IR Y H ++SL+ M + P +FT S
Sbjct: 36 NYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYS 95
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
K+C + +Q+H I GF DLY+ N +I MY + G L +R+VF
Sbjct: 96 FALKSCGRLKLTQQAKQLHG-FINKMGFGFDLYIQNALIHMYSEIGELVIARQVF----- 149
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+ + +D V+WT+M+ G+V + EAI+ F+RM
Sbjct: 150 --------------------------DRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRM 183
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
GV+ + T++ V+ CA G + V I + G NV +ALI MYSKCG
Sbjct: 184 LEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVC--TALIHMYSKCG 241
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++ A +F + R+VF +++MI G A HG AI+LF +M KP+ T + VL+
Sbjct: 242 CLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLS 301
Query: 297 ACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG 344
A + GL K Y + P+ H+ CMVDLL + GCLEEA + MP++P+
Sbjct: 302 AYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDA 361
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELE---PDKIGNYIILSNIYASAGMWDDVSRVR 401
+W L+ AC++H + E A+ HL EL+ G+YI+ SN+YAS G W D + VR
Sbjct: 362 VIWRTLIWACKVHADTERAERLMKHL-ELQGMSAHDSGSYILASNVYASTGKWCDKAEVR 420
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
L+ GL K PG S +E D GV+HEF GD HP++ +I L ++D+L+ +GY P +
Sbjct: 421 ELMNKKGLVKPPGSSRIEVD-GVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKV 479
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
V+ ++ DEEK L+ HSEKLALA+GL+ T PG+ +RI+KNLR CEDCH FM S+V
Sbjct: 480 SEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKV 539
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
R+I+VRD +RFHHF++G CSC +YW
Sbjct: 540 YQRDIIVRDRIRFHHFKNGDCSCKDYW 566
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 309/564 (54%), Gaps = 56/564 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ L+F V + FL+ ++I+ ++ Y M + P ++T +++ K+C
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + +G+ +H ++ GF D YV ++ Y KCG
Sbjct: 118 ADLSALRIGKGVHCHAVV-SGFGLDTYVQAALVTFYSKCG-------------------- 156
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
DME A +F+ +P K VAW ++V+G+ QN EAI+ F +M+ +G E
Sbjct: 157 -----------DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCE--IAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
D T V ++SACAQ G + +WV + I+EG NV +G+ALI++YS+CG +
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL----NVKLGTALINLYSRCGDVGK 261
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACS 299
A +F MK+ NV ++++MI + HG A++LF M PN VTF+ VL+AC+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG--- 344
H GL K Y + P +H+ CMVD+LGRAG L+EA K + ++
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
+W A+LGAC++HRN ++ A L LEPD G++++LSNIYA +G D+VS +R +
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
L+K GYS +E + + F GD +H + EI + L L+ R + GY P V
Sbjct: 442 MRNNLRKQVGYSVIEVENKT-YMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
++ V +EEK+ L HSEKLA+AFGLL T A + I+KNLRICEDCH S V R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVA-ITIVKNLRICEDCHSAFKYISIVSNR 559
Query: 525 EIVVRDNMRFHHFQDGKCSCGNYW 548
+I VRD +RFHHFQ+G CSC +YW
Sbjct: 560 QITVRDKLRFHHFQNGSCSCLDYW 583
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 276/447 (61%), Gaps = 18/447 (4%)
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
RD + T L+ YAN GD + A LF E+P +D VAW +++ +N + ++A++ FE M
Sbjct: 152 RDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEM 211
Query: 177 Q--YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK 234
+ +G E D VT + ++ AC LG + + V AE G+G + V ++LI MYS+
Sbjct: 212 RGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGA--KLKVRNSLIAMYSR 269
Query: 235 CGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
CG +D AYR+F G Q++V ++S+MI G A +G AI F +M++++ P+ TF GV
Sbjct: 270 CGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGV 329
Query: 295 LTACSHVGL-----------KC-YGVSPSTDHYACMVDLLGRAGCLEEALKMV-EKMPVE 341
L+ACSH GL +C YG+ P+ HY C+VDL+GRAG L+EA ++V +M V
Sbjct: 330 LSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVA 389
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P+ +W LLGAC+IH + ++ + ++L EL+ + G+Y++L N YA+ G W VS VR
Sbjct: 390 PDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVR 449
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
+L++ G++ PG + +E + G ++EF A D HP EI + L ++ +L+ GY PN+
Sbjct: 450 KLMQEKGIQTTPGCTTVEHN-GEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNV 508
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
S L+D+ E K+ L HSEKLA+AF LL T +R+ KNLR+C DCH F S +
Sbjct: 509 SSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKVFSGI 568
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
R ++VRD RFHHFQ GKCSC +YW
Sbjct: 569 YNRLVIVRDRTRFHHFQGGKCSCNDYW 595
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 131/306 (42%), Gaps = 48/306 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR--REGIGPVSFTLSALFKACT 63
R +F ++ ++ W LI KD++ L+ MR G P T L +ACT
Sbjct: 174 RKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMRGRDSGAEPDDVTCILLLQACT 233
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+Q+ A G+ + L V N++I MY +CG + + +VF P++ VV+W+
Sbjct: 234 SLGALDFGEQVWAYA-EEHGYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWS 292
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I A NG F + +AI FE M + V
Sbjct: 293 AMISGLAANG--------FGD-----------------------DAISAFEEMIRSDVAP 321
Query: 184 DYVTLVGVISACAQLGVIK-----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
D T GV+SAC+ G++ + CE +G NV ++D+ + G +
Sbjct: 322 DEQTFTGVLSACSHSGLVDEGFRFFDMMRCE------YGLKPNVRHYGCIVDLMGRAGLL 375
Query: 239 DDAYRIFVG-MKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
D+AY + MK + +LG +HG ++ ++++ + + G ++ +L
Sbjct: 376 DEAYELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAG-DYVLLLN 434
Query: 297 ACSHVG 302
+ VG
Sbjct: 435 TYAAVG 440
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 304/556 (54%), Gaps = 70/556 (12%)
Query: 15 KNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQI 74
+N WTA+I G I G + ++ L+ MR + + P FT SA+ KA +L QI
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQI 422
Query: 75 HAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGD 134
HAQ ++ + VG ++ Y K G + +F + ++DVV+W+ ++ +A GD
Sbjct: 423 HAQ-VIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481
Query: 135 MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISA 194
E A LFN++ +Q KP E T+ VI A
Sbjct: 482 CEGATYLFNKMA--------------IQGIKPNE-----------------FTISSVIDA 510
Query: 195 CAQLGVIKYANWVCEIA---EGSGFGPI-------NNVVVGSALIDMYSKCGSIDDAYRI 244
CA C A +G F I + + V SAL+ MYS+ G+ID A +
Sbjct: 511 CA-----------CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIV 559
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F R++ S++SMI G+A HG + AI+ F M + + +GVTF+ V+ C+H GL
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLV 619
Query: 305 CYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G ++P+ +HYACMVDL RAG L+E + ++ MP VW LLG
Sbjct: 620 VEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG 679
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H+N E+ + +A+ L LEP Y++LSNIYA+AG W + VR+L+ +KK
Sbjct: 680 ACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKE 739
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW++ + +H F A D +HP S +I + L ++ RL+ DGY PN VL+D+++++
Sbjct: 740 AGCSWIQ-IKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQ 798
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L+ HSE+LALAFGL+ T PG ++I+KNLR+C DCH+ M S + REI++RD
Sbjct: 799 KEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCS 858
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF G CSCG++W
Sbjct: 859 RFHHFNGGACSCGDFW 874
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 35/291 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + KN WT+L+ G + ++L+ MR EGI P FT +++ A
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LGQ++HAQ++ G +S ++V N+++ MY KCG + ++ VF+ M RD+VSW L+
Sbjct: 217 LDLGQRVHAQSVKFGCRSS-VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM- 274
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AG NE L EA++ F + + T
Sbjct: 275 ----------AGLQLNECEL--------------------EALQLFHESRATMGKMTQST 304
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-V 246
VI CA L + A + GF NV+ +AL D YSKCG + DA IF +
Sbjct: 305 YATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--TALADAYSKCGELADALNIFSM 362
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
RNV S++++I G +G A+ LF M + PN T+ +L A
Sbjct: 363 TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 44/339 (12%)
Query: 27 YILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS 86
Y +G + + + + RR G+ S TLS + KAC V D LG+Q+H + G
Sbjct: 74 YARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
++ G +++ MY+KCG + +VF+ MP+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPK------------------------------ 163
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
K+ V WT+++TG E + F RM+ G+ + T V+SA A G +
Sbjct: 164 -KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQR 222
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
V A+ FG ++V V ++L++MY+KCG ++DA +F M+ R++ S+++++ G ++
Sbjct: 223 V--HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLN 280
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHY 315
A+QLF + T K T+ V+ C+ H + +G + +
Sbjct: 281 ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM 340
Query: 316 ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ D + G L +AL + N W A++ C
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 36/243 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT-EVL 66
+F+ ++ K+ W+A++ + G + + L+ M +GI P FT+S++ AC
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSA 516
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+Q HA +I + + V + ++ MY + G + ++ VF+ +RD+VSW
Sbjct: 517 GVDQGRQFHAISIKY-RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW---- 571
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+M++GY Q+ +AIE F +M+ +G++ D V
Sbjct: 572 ---------------------------NSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 187 TLVGVISACAQLG-VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T + VI C G V++ + + P + ++D+YS+ G +D+ +
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY--ACMVDLYSRAGKLDETMSLI 662
Query: 246 VGM 248
M
Sbjct: 663 RDM 665
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 142 FNELPLKDK-VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG- 199
+E+P +D V ++ Y + E ++ F + GV D TL V+ AC +
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 200 --VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ + + +C + G G ++ G++L+DMY KCGS+ + +F GM ++NV +++
Sbjct: 115 RVLGEQLHCLC-VKCGHDRGEVS---AGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 258 SMILGFAMHGRAHAAIQ-LFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--VSPSTDH 314
S++ G A H + H+ + LF M PN TF VL+A + G G V +
Sbjct: 171 SLLTGCA-HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 315 YAC---------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ C ++++ + G +E+A + M + W L+ Q++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN 280
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 6/184 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++VFE+ ++ W ++I GY G+ +I + M GI T A+ CT
Sbjct: 557 QIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHN 616
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V GQQ + + M+ +Y + G L + + +MP + W
Sbjct: 617 GLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRT 676
Query: 125 LIVAYANNGDME----SAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
L+ A + ++E SA L + P D + + Y K +E E + M Y
Sbjct: 677 LLGACRVHKNVELGKFSADKLLSLEP-HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRK 735
Query: 181 VETD 184
V+ +
Sbjct: 736 VKKE 739
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 300/555 (54%), Gaps = 50/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K+ WTA+I GY G ++++ + M E + L + AC +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ +H+ + LG F SD++VGN + MY K G
Sbjct: 223 CKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG------------------------- 256
Query: 128 AYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
DMESA +F + ++ V++T ++ GYV+ + + + F ++ G+E +
Sbjct: 257 ------DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +I ACA ++ + F + V S L+DMY KCG ++ A + F
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFD--EDPFVSSILVDMYGKCGLLEQAIQAFD 368
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ +++S++ F HG AI++F MV KPN +TFI +LT CSH GL
Sbjct: 369 EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K YGV P +HY+C++DLLGRAG L+EA + + +MP EPN W + LGAC
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH + E+ ++AA L +LEP G ++LSNIYA+ W+DV VR ++ +KK PG
Sbjct: 489 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 548
Query: 415 YSWLEGDRGV-IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
YSW+ D G H F A D +HP + I + L LLD+++A GY P SV D+ D K
Sbjct: 549 YSWV--DVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMK 606
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L HSE++A+AF L++ G + + KNLR+C DCH + S+V GR+I+VRDN R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSCG+YW
Sbjct: 667 FHHFTDGSCSCGDYW 681
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 168/356 (47%), Gaps = 47/356 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + +N WTA+I G ++I +C MR G P F S+ +AC +
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+Q+H + G S+L+VG+ + MY KCG + + KVF+EMP +D VSWT +I
Sbjct: 122 IEMGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ G+ E EA+ F++M V D
Sbjct: 181 GYSKIGEFE-------------------------------EALLAFKKMIDEEVTIDQHV 209
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-V 246
L + AC L K+ V GF +++ VG+AL DMYSK G ++ A +F +
Sbjct: 210 LCSTLGACGALKACKFGRSVHSSVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-------- 298
+ RNV SY+ +I G+ + + +F ++ + +PN TF ++ AC
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 299 -SHVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ + + ++ D + + +VD+ G+ G LE+A++ +++ +P W +L+
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLV 382
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+HA ++ G+T ++ N ++ MY KCG
Sbjct: 24 GKQLHA-LLICAGYTPCTFLTNHLVNMYSKCG---------------------------- 54
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+++ A LF+ +P ++ V+WTAM++G QN+K EAI F M+ G
Sbjct: 55 ---ELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSS 111
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
I ACA LG I+ + +A G G + + VGS L DMYSKCG++ DA ++F M
Sbjct: 112 AIRACASLGSIEMGKQMHCLALKFGIG--SELFVGSNLEDMYSKCGAMFDACKVFEEMPC 169
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
++ S+++MI G++ G A+ F M+ E + L AC
Sbjct: 170 KDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D L VI A+ ++ + + +G+ P + + L++MYSKCG +D A +
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCT--FLTNHLVNMYSKCGELDHALK 61
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F M QRN+ S+++MI G + + + AI+ F M P F + AC+ +G
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 303 ------LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ C +G+ + + D+ + G + +A K+ E+MP + W A++
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/554 (36%), Positives = 307/554 (55%), Gaps = 47/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ +++ W+A++ Y GH ++++ L+ M +G+ P TL + AC + D
Sbjct: 118 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G +H Q + G S + VG ++ +Y KCG
Sbjct: 178 LRSGALMH-QRVEAQGIQSGVVVGTALVNLYGKCG------------------------- 211
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+E+A F ++ K+ VAW+A+ Y +N + R+AI RM G+ + T
Sbjct: 212 ------RIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTT 265
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V V+ ACA + +K + E + G G ++V V +AL++MYSKCG++ A +F
Sbjct: 266 FVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDK 325
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
+ ++ ++S+I A HG+ A++LF M +P +TF VL ACSH G+
Sbjct: 326 IAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 385
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+G+ P +H+ CMVDLLGRAG + ++ ++ MP EP+ W A LGAC+
Sbjct: 386 RKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 445
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+RN + A AA +LF+L+P K Y++LSN+YA AG W DV+R+R+ +++ K G
Sbjct: 446 TYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGR 505
Query: 416 SWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E DR +HEF +GDL HP EI L L ++ GY P+ VL+DV E K+
Sbjct: 506 SWIEVKDR--VHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKE 563
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
++ HSEKLA+AF LLTT G+ +R++KNLR+C DCH S+++ REIVVRD RF
Sbjct: 564 IMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRF 623
Query: 535 HHFQDGKCSCGNYW 548
H FQ+G CSCG+YW
Sbjct: 624 HRFQNGACSCGDYW 637
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 162/372 (43%), Gaps = 50/372 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R F+++ + W ALI YI + M +GI P +S ACT+
Sbjct: 15 RKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDA 74
Query: 66 LDVSLGQQIHAQTILLG-GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
++++G+ I Q +LG G + V ++ MY K G + VF M R
Sbjct: 75 REITIGRSI--QLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHR------- 125
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
D VAW+AMV Y +N PREA+ F +M GV +
Sbjct: 126 ------------------------DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPN 161
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTLV + ACA LG ++ + + E G + VVVG+AL+++Y KCG I+ A
Sbjct: 162 KVTLVSGLDACASLGDLRSGALMHQRVEAQGIQ--SGVVVGTALVNLYGKCGRIEAAVEA 219
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
F + ++NV ++S++ +A + R AI++ M PN TF+ VL AC+
Sbjct: 220 FGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAAL 279
Query: 300 ------HVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + G +D Y +V++ + G L A M +K+ + +W +L+
Sbjct: 280 KQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKI-AHLDLVLWNSLI 338
Query: 352 GACQIHRNPEIA 363
H E A
Sbjct: 339 ATNAQHGQTEKA 350
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 94 MIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAW 153
M+ Y + G + RK FDEMP D+VSW LI AY N D + W
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDR--------------CW 46
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
+F M G+ V + +SAC I + G
Sbjct: 47 L-----------------FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILG 89
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
+G +V +AL+ MY K G DA +F+ M R+V ++S+M+ +A +G A+
Sbjct: 90 TGIE--EESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREAL 147
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLL 322
LF M PN VT + L AC+ +G ++ G+ +V+L
Sbjct: 148 GLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLY 207
Query: 323 GRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G+ G +E A++ ++ VE N W A+ A
Sbjct: 208 GKCGRIEAAVEAFGQI-VEKNVVAWSAISAA 237
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 308/556 (55%), Gaps = 54/556 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREGIGPVSFTLSALFKACTE 64
+++F+++ +N WT +I Y L D ++ L M R+G+ P FT S++ +AC
Sbjct: 340 QVLFDKMPERNVVSWTTMISAYS-NAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACER 398
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ D+ +Q+H+ I+ G SD++V + +I +Y K
Sbjct: 399 LYDL---KQLHSW-IMKVGLESDVFVRSALIDVYSKM----------------------- 431
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
G++ A +F E+ D V W +++ + Q++ EA+ ++ M+ G D
Sbjct: 432 --------GELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPAD 483
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
TL V+ AC L +++ A ++++ +AL+DMY KCGS++DA I
Sbjct: 484 QSTLTSVLRACTSLSLLELG----RQAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFI 539
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M +++V S+S+MI G A +G + A+ LF M KPN +T +GVL ACSH GL
Sbjct: 540 FNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLV 599
Query: 304 -----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
YG+ P +HY CM+DLLGRA L++ +K++ +M EP+ W LL
Sbjct: 600 NEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLD 659
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ +N ++A AA + +L+P G Y++LSNIYA + W+DV+ VRR +K G++K
Sbjct: 660 ACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKE 719
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E ++ IH F GD +HP EI + L + RL GY P+ VL D+ E+
Sbjct: 720 PGCSWIEVNKQ-IHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQ 778
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
++ L HSEKLA+ FG+++ T+RI KNL+IC DCH F +++ R IV+RD +
Sbjct: 779 REDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPI 838
Query: 533 RFHHFQDGKCSCGNYW 548
R+HHFQDG CSCG+YW
Sbjct: 839 RYHHFQDGVCSCGDYW 854
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 309/562 (54%), Gaps = 52/562 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ L+F V + FL+ ++I+ ++ Y M + P ++T +++ K+C
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
++ + +G+ +H ++ GF D YV ++ Y KCG
Sbjct: 118 ADLSALKIGKGVHCHAVV-SGFGLDTYVQAALVTFYSKCG-------------------- 156
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
DME+A +F+ +P K VAW ++V+G+ QN +AI F +M+ +G E
Sbjct: 157 -----------DMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFE 205
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D T V ++SACAQ G I +WV + G NV +G+ALI++YS+CG + A
Sbjct: 206 PDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDV--NVKLGTALINLYSRCGDVGKAR 263
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT-ETKPNGVTFIGVLTACSHV 301
+F MK+ NV ++++MI + HG A+ LF M + PN VTF+ VL+AC+H
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHA 323
Query: 302 GL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNG---GV 346
GL + Y + P +H+ C+VD+LGRAG L+EA + ++++ N +
Sbjct: 324 GLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPAL 383
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W A+LGAC++HRN ++ A L LEP+ G++++LSNIYA +G D+VS +R +
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMR 443
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
L+K GYS +E + + F GD +H + EI + L L+ R + GY P V++
Sbjct: 444 NNLRKQVGYSIIEVENKT-YLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMH 502
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
V +EEK+ L HSEKLA+AFGLL T A + ++KNLRICEDCH S V R+I
Sbjct: 503 QVEEEEKEFALRYHSEKLAVAFGLLKTVDSA-ITVVKNLRICEDCHSAFKYISIVSNRQI 561
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD +RFHHFQ+G CSC +YW
Sbjct: 562 IVRDKLRFHHFQNGSCSCLDYW 583
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 311/553 (56%), Gaps = 47/553 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE V + F + ++I GY+ +G L S+ + +M E + A+ C + D
Sbjct: 165 VFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKD 224
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG Q+HAQ L ++YVG+ ++ MY KC + + + F+ +PE++VVSWT ++
Sbjct: 225 SVLGAQVHAQA-LKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMT 283
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY QN +A++ F M+ GV+ + T
Sbjct: 284 AY-------------------------------TQNELYEDALQLFLDMEMEGVQPNEFT 312
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+++CA L ++ N + +G ++++V +AL++MYSK GSI+DA+R+F+
Sbjct: 313 YAVALNSCAGLAALRTGNALGACVMKTGHW--DHLLVSNALMNMYSKSGSIEDAHRVFIS 370
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M R+V S++ +I G+A HG A ++ F M+ P+ VTF+GVL+AC+ +GL
Sbjct: 371 MPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEA 430
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K G++P +HY CMV LL R G L+EA + + + + W +LL +CQ
Sbjct: 431 FYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQ 490
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+++N + A + +LEP +G Y++LSN+YA A WD V +VR+ ++ ++K+PG
Sbjct: 491 VYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGV 550
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+ V H F + + HP +I + L +L+D+++A GY PN VL+D+ DE K+
Sbjct: 551 SWIHVGSDV-HVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEE 609
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
LM HSEKLALAFGL+ T GAT+ IMKNLRIC+DCH+ + S V R+IVVRD +RFH
Sbjct: 610 HLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFH 669
Query: 536 HFQDGKCSCGNYW 548
+ G CSC +YW
Sbjct: 670 CIEGGICSCNDYW 682
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 153/354 (43%), Gaps = 58/354 (16%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R VF+ + ++N L+ GY G K+S+ L +R G + LSA A
Sbjct: 63 LARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATA 119
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
V +G+Q H + GF YV N ++ MY +C + + KVF+ + D ++
Sbjct: 120 NVRSYDMGRQCHGYAV-KAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFN 178
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y + G ++ + G+ + TG + +
Sbjct: 179 SMINGYLDRGQLDGSLGIVRNM------------TGEAE-------------------KW 207
Query: 184 DYVTLVGVISACAQ-----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
DYV+ V V+ CA LG +A + + E NV VGSAL+DMY KC +
Sbjct: 208 DYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLE-------LNVYVGSALVDMYGKCDHV 260
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
DA R F + ++NV S+++++ + + A+QLF DM +PN T+ L +C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320
Query: 299 SHVGL--------KCYGVSPSTDHY---ACMVDLLGRAGCLEEALKMVEKMPVE 341
+ + C + DH ++++ ++G +E+A ++ MP+
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR 374
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
D+S G+ +HA+ I F D+ + N +I Y KCG +G +R VFD MP R+ VS L+
Sbjct: 26 DLSKGKALHARLITAAHF--DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
YA++G + +E+++ + + +YV
Sbjct: 84 SGYASSG-------------------------------RHKESLQLLRVVDFG--MNEYV 110
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
L +SA A + A +GF V +A++ MY +C ++DA ++F
Sbjct: 111 -LSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVF--NAVLYMYCQCAHMEDASKVFE 167
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
+ + F+++SMI G+ G+ ++ + +M K + V+++ VL C+ +
Sbjct: 168 SVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVL 227
Query: 307 GVSPSTDHY-----------ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
G + +VD+ G+ + +A + E +P E N W A++ A
Sbjct: 228 GAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLP-EKNVVSWTAVMTA 284
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 290/507 (57%), Gaps = 40/507 (7%)
Query: 52 SFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVF 111
+ +LS KA D Q+HA + LG T+D+ + T++ Y KC L +RKVF
Sbjct: 104 ALSLSFALKASARCSDGPATLQLHALVLRLG-CTADVRLITTLLDSYAKCDELASARKVF 162
Query: 112 DEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIE 171
DEM RDV SW L+ A + A LF+ L Q PREA
Sbjct: 163 DEMTVRDVASWNALLAGLAQGTEPSLALALFHRL------------VRSFQELPPREA-- 208
Query: 172 YFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
+ VT++ +SACAQ+G ++ V E A G G NV V +ALIDM
Sbjct: 209 -----------PNVVTIIAALSACAQIGSLQDGLCVHEFARKIGVG--GNVRVCNALIDM 255
Query: 232 YSKCGSIDDAYRIFVGMKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
YSKCGS+ A +F +K+ R + SY++ I +MHG A++LF +M T +P+ V
Sbjct: 256 YSKCGSLARALEVFHSIKREDRTLVSYNTAIQAISMHGHGGDALKLFDEM-PTCIEPDEV 314
Query: 290 TFIGVLTACSHVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
T+I VL C+H GL G V P+ HY +VDLLGRAG L EA ++ MP
Sbjct: 315 TYIAVLCGCNHAGLVDEGLRVFHGMRVPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFP 374
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
+ +W LLGA + H + E+A++AA L EL + G+Y++LSN+YAS W DV RVR
Sbjct: 375 ADIVLWQTLLGASKTHGDVELAEVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVR 434
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
++ ++K PG+S+ E GV+H+F GD HP EI +ALG+++ R+ GY+P
Sbjct: 435 DTMRSNDVRKVPGFSYTEIS-GVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPET 493
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
+VL+D+ +EEK+ L HSEKLA+AFGL+ T PG T+R++KN+RIC DCH+ S+
Sbjct: 494 SNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKA 553
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
GR I++RD RFH F+DG+CSC +YW
Sbjct: 554 YGRAIIIRDRARFHRFEDGQCSCSDYW 580
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 303/546 (55%), Gaps = 52/546 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WTA+I G++ + K ++ L+C M REG+ P FT S + SL Q+H
Sbjct: 372 NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLH 427
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQ I + ++++P T L+ AY G++
Sbjct: 428 AQII----------------------------KAYYEKVPS----VATALLDAYVKTGNV 455
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+ +F +P KD VAW+AM+TG Q +A+E F ++ GV+ + T VI+AC
Sbjct: 456 VESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515
Query: 196 AQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
+ +++ + A SG N + V SAL+ MYSK G+I+ A ++F ++R++
Sbjct: 516 SSSAATVEHGKQIHATAVKSG--KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++SMI G+ HG A A+++F M + VTFIGVLTAC+H GL
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
K Y + +HY+CMVDL RAG ++A+ ++ MP + +W LL AC++HRN E+
Sbjct: 634 IKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLEL 693
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
++AA L L+P+ Y++LSNI+A AG W++ + VR+L+ +KK G SW+E +
Sbjct: 694 GKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE-IK 752
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
I F AGD++HP S + L +L +L+ GYQP+ V +DV +E K+ IL HSE
Sbjct: 753 NRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSE 812
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
+LA+A+GL+ PGA ++I KNLRIC DCH + S + R ++VRD+ RFHHF+ G C
Sbjct: 813 RLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVC 872
Query: 543 SCGNYW 548
SCG YW
Sbjct: 873 SCGGYW 878
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 49/369 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN WT+L+ GY G + I L M+ EG+ P FT + + A +
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+HA I+ GF +V N +I MY+K +G + VFD M RD V+W +
Sbjct: 219 SIIEGGVQVHAM-IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIM 277
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA A G + E + F RM+ AGV+
Sbjct: 278 IGGYA-------AIGFY------------------------LEGFQMFHRMRLAGVKLSR 306
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ C+Q + + + C + + +G+ + + +AL+ YSKC S+D+A+++
Sbjct: 307 TVFCTALKLCSQQRELNFTKQLHCGVVK-NGYEFAQD--IRTALMVTYSKCSSVDEAFKL 363
Query: 245 F-VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA------ 297
F + NV ++++MI GF + A+ LF M + +PN T+ VL
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 298 ---CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + Y PS ++D + G + E+ ++ +P + + W A+L
Sbjct: 424 SQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGL 480
Query: 355 QIHRNPEIA 363
R+ E A
Sbjct: 481 AQTRDSEKA 489
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 48/366 (13%)
Query: 1 MDSFPRL---VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSA 57
+ S PR +F++ K+ + L+ + H ++++ L+ + G+G TLS
Sbjct: 50 LPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
K C + D +G+Q+H Q+ L GF D+ VG +++ MY+K
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQS-LKSGFLEDVSVGTSLVDMYMK----------------- 151
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
TE D E G+F+E+ +K+ V+WT++++GY +N E I +MQ
Sbjct: 152 -----TE---------DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV + T V+ A A +I+ V + +GF V +ALI MY K
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEF--TTFVCNALICMYLKSEM 255
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ DA +F M R+ +++ MI G+A G Q+F M K + F L
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 298 CS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CS H G+ G + D ++ + ++EA K+ N
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 347 WGALLG 352
W A++G
Sbjct: 376 WTAMIG 381
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 42/246 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
VF + K+ W+A++ G + ++ ++ + +EG+ P +T S++ AC+
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+QIHA T + G ++ L V + ++ MY K G + + KVF ERD+VSW +I
Sbjct: 521 TVEHGKQIHA-TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMI 579
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y +GD ++A+E F+ MQ G+ D V
Sbjct: 580 TGYGQHGD-------------------------------AKKALEVFQIMQNQGLPLDDV 608
Query: 187 TLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T +GV++AC G++ KY N + + + S ++D+YS+ G D A
Sbjct: 609 TFIGVLTACTHAGLVEEGEKYFNIMIK-----DYHIDKKXEHYSCMVDLYSRAGMFDKAM 663
Query: 243 RIFVGM 248
I GM
Sbjct: 664 DIINGM 669
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 310/559 (55%), Gaps = 56/559 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R V ++ +N WTA+I Y +G+ ++S+ + R G FT + +
Sbjct: 81 RHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYFMYRF 140
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L L + IH+ I L F + +YVG++++ MY K G + +R +F+ +PERDVVS T +
Sbjct: 141 LGFCLREAIHSLIIKL-NFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 199
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +L L E +E F R+Q G+ ++Y
Sbjct: 200 ISGYA-------------QLDLD-------------------EELELFLRLQREGMXSNY 227
Query: 186 VTLVGVISACAQLGVIKYANWVCE---IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
VT V++A + L + + V +E F V++ ++LIDMYSKCG++ A
Sbjct: 228 VTYTSVLTALSGLAALDHGKQVHNHLLCSEVPSF-----VILQNSLIDMYSKCGNLTYAR 282
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHV 301
RIF M++R V S+++M++G++ HG ++LF M + + KP+ VT + VL+ CSH
Sbjct: 283 RIFDTMRERTVISWNAMLVGYSKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHG 342
Query: 302 GLKCYG-------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G + G V P T Y C+VDLLGRAG +EEA + ++K+P EP+ + G
Sbjct: 343 GQEDKGMDIFYDMTSGKISVQPDTKRYGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICG 402
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LLGAC +H N I + + L E EP+ GNY+ILSN+YASAG W+DV+ +R L+
Sbjct: 403 CLLGACSVHSNLGIGEFVGHRLLEFEPENAGNYVILSNLYASAGRWEDVTSLRNLMLKKA 462
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
+ K PG S +E D+ V+ F D +HP E+ +LL R + GY P+L VL+DV
Sbjct: 463 VTKEPGRSLIEVDQ-VLQTFHPSDCSHPRREEVSAKXQELLVRFKEAGYFPDLSCVLHDV 521
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
+E+K++IL++HSEKLAL+FGL+ T + ++KNLRIC DCH F S++ RE+ +
Sbjct: 522 DEEQKEKILLSHSEKLALSFGLIATPESVLICVIKNLRICVDCHNFAKYISKIYSREVSL 581
Query: 529 RDNMRFHHFQDGKCSCGNY 547
RD FH KCSCG+Y
Sbjct: 582 RDKNWFHGIVGEKCSCGDY 600
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 53/295 (17%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
GQ++HA TI K +L C V WT LIV Y
Sbjct: 45 GQRVHAHTI--------------------KTHYLPC------------VYLWTRLIVFYT 72
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+ A + NE+P ++ V+WTAM++ Y Q +A+ ++ +G E++ T
Sbjct: 73 KCDSLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTF-- 130
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPIN---NVVVGSALIDMYSKCGSIDDAYRIFVG 247
A + ++ + A S +N +V VGS+L+DMY+K G I +A IF
Sbjct: 131 ---ATMPYFMYRFLGFCLREAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFEC 187
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ +R+V S +++I G+A ++LF + + N VT+ VLTA S
Sbjct: 188 LPERDVVSCTAIISGYAQLD-LDEELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHG 246
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H L C V ++D+ + G L A ++ + M E W A+L
Sbjct: 247 KQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMR-ERTVISWNAML 300
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/516 (38%), Positives = 297/516 (57%), Gaps = 29/516 (5%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGF-LGCSR 108
P F+ + + K + +SL +H ++ FT L + + + F LG
Sbjct: 51 PDPFSYNTIIKHVSPTGAISLFSHMHRNSVPFDHFTFPLILKHHHHHLLHSLIFKLGFDT 110
Query: 109 KVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+F + LI AY + G ++ A LF+E+ +D V+W+ +++ V+N P E
Sbjct: 111 NIFVQ---------NALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAE 161
Query: 169 AIEYFERMQYAGVET----DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
A+ F++MQ + D ++ VISA + LGVI+ WV G + V +
Sbjct: 162 ALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGI--VMTVPL 219
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
G+ALI+MYS+CG ID + ++F M +RNV +++++I G A+HGR+ A+++F +M ++
Sbjct: 220 GTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGL 279
Query: 285 KPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEAL 332
KP+G FIGVL ACSH GL +G+ P +HY CMVDLLGRAG + EA
Sbjct: 280 KPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAF 339
Query: 333 KMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAG 392
VE+MP++PN +W LLGAC H + +A+ A + EL+P G+Y++LSN Y G
Sbjct: 340 DFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVG 399
Query: 393 MWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRL 452
W + +R +K + K PG S++ D+ V+HEF +GD HP EI + L ++D +
Sbjct: 400 NWGGKAGLRNSMKQNRIVKEPGLSFVHIDQ-VVHEFVSGDHVHPQWEEITKFLASIIDTV 458
Query: 453 QADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
+ GY PN SVL+D+ DEEK+ L HSEKLA+AF LL T+R++KNLRIC DCH
Sbjct: 459 KLGGYTPNTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCH 518
Query: 513 LFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
FM AS + R+I++RD RFHHF G CSC ++W
Sbjct: 519 DFMKHASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ +N WTALI G + G ++++ ++ M+ G+ P + AC+
Sbjct: 239 VFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGL 298
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELI 126
V G ++ G L M+ + + G + + +EMP + + V W L+
Sbjct: 299 VEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLL 358
Query: 127 VAYANNGDM 135
A N+ +
Sbjct: 359 GACVNHNHL 367
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 197/559 (35%), Positives = 316/559 (56%), Gaps = 52/559 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPV--SFTLSALFKAC 62
R +F+++ ++ F W+A++ + G + ++++Y M RE G V FT S+ A
Sbjct: 113 RALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAA 172
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
T G+++H + R+ D D V W
Sbjct: 173 TAARCARAGRELHCHVV----------------------------RRGIDA----DAVVW 200
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
+ L YA G ++ A +F+ +P++D V+WTAMV Y + E F RM +G++
Sbjct: 201 SALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQ 260
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
+ T GV+ ACA+ K V S G ++ SAL+ MYSK G + A
Sbjct: 261 PNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAG--DSCFAESALVHMYSKYGDMGTAV 318
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F GM + ++ S+++MI G+A +G+ A++ F ++++ +P+ VTF+GVL+AC+H G
Sbjct: 319 RVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAG 378
Query: 303 L------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGAL 350
L YG+ + DHYAC++DLL R+G E A +M+ M V+PN +W +L
Sbjct: 379 LVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASL 438
Query: 351 LGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLK 410
LG C+IH+N +A+ AA LFE+EP+ Y+ L+NIYAS G++D+V RR++++ G+
Sbjct: 439 LGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGIT 498
Query: 411 KNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVS 469
K P SW+E G R +H F GD HP + ++ L L +++ +GY + VL+DV
Sbjct: 499 KMPASSWIEVGTR--MHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVE 556
Query: 470 DEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVR 529
DE+K++ + HSE+LA+AFG++ T GA +++ KNLRIC DCH + S+++ REI+VR
Sbjct: 557 DEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVR 616
Query: 530 DNMRFHHFQDGKCSCGNYW 548
D+ RFHHF++G CSC +YW
Sbjct: 617 DSNRFHHFKNGSCSCRDYW 635
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 146/304 (48%), Gaps = 23/304 (7%)
Query: 110 VFDEMPERDVVSWTELIVAYANNGD-MESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
+ +P DV S+ L+ A + + SA LF+ +P +D +W+A+V+ + ++ +PR
Sbjct: 83 LLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRA 142
Query: 169 AIEYFERMQY----AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVV 224
A+ + RM AGV+ ++ + +A A C + G + VV
Sbjct: 143 ALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRR---GIDADAVV 199
Query: 225 GSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
SAL DMY+KCG +DDA +F M R+V S+++M+ + R +LF M+++
Sbjct: 200 WSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGI 259
Query: 285 KPNGVTFIGVLTACSH-----VGLKCYG-VSPSTDHYAC-----MVDLLGRAGCLEEALK 333
+PN T+ GVL AC+ +G + +G ++ S +C +V + + G + A++
Sbjct: 260 QPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVR 319
Query: 334 MVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASA 391
+ MP + + W A++ + P+ A + L PD + +LS A A
Sbjct: 320 VFRGMP-KLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSAC-AHA 377
Query: 392 GMWD 395
G+ D
Sbjct: 378 GLVD 381
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 301/546 (55%), Gaps = 51/546 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++I Y +++LY M G FTL+++ + V D+S G Q HA+ I
Sbjct: 209 WNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAI 268
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGF-LGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
G F + +VG+ +I MY KCG + SRKVF+E+ D+V
Sbjct: 269 KTG-FNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV------------------ 309
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAK-PREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
W M++GY QN + EA+E F +MQ AG D + V ISAC+
Sbjct: 310 -------------VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSN 356
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
L +A S P N + V +AL+ MYSKCG++ DA ++F M Q N + +
Sbjct: 357 LSSPSQGKQFHALAMKSEI-PSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLN 415
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
S+I G+A HG ++ LF M+ P +T + +L+AC+H G
Sbjct: 416 SIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDI 475
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
+G+ P +HY+CM+DLLGRAG L EA ++++ MP P W ALLGAC+ + N E+A+
Sbjct: 476 FGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEK 535
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
AAN +LEP YI+L+++Y++A W++ +R+R+L++ G++K PG SW+E ++ V
Sbjct: 536 AANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRV- 594
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY---DVSDEEKKRILMTHSE 482
H F A D +HP EI L ++ +++ GY P++R + ++EK+ +L HSE
Sbjct: 595 HVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSE 654
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
KLA+AFGLL T G + ++KNLRIC DCH + S + R+I VRD RFH F+DG+C
Sbjct: 655 KLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRC 714
Query: 543 SCGNYW 548
SCG+YW
Sbjct: 715 SCGDYW 720
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 129/257 (50%), Gaps = 14/257 (5%)
Query: 52 SFTLSA---LFKACTEVLDVSLGQQIHAQTILLGGFT-SDLYVGNTMIGMYVKCGFLGCS 107
S+TL + + K+C D+ G+ +H TI L S Y+ N I +Y KC L +
Sbjct: 5 SWTLQSFRQILKSCIANKDLLTGKSLH--TIYLKSLIPSSTYLSNHFILLYSKCNLLTTA 62
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPR 167
F++ E +V S+ LI AYA + A LF+++P D V++ ++ Y
Sbjct: 63 HHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTL 122
Query: 168 EAIEYFERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
A+ F M+ G+ D T GVI+AC +G+I+ + +A SGF V V +
Sbjct: 123 SALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLH---SLAFSSGFDSY--VSVKN 177
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
+L+ YSK G +++A +F GM + R+ S++SMI+ + H R A+ L+ DMV
Sbjct: 178 SLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGF 237
Query: 285 KPNGVTFIGVLTACSHV 301
+ + T VLT S V
Sbjct: 238 EIDMFTLASVLTTFSCV 254
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 52/348 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+Q+ + + LI Y +G ++SL+ MR G+ FT S + AC
Sbjct: 96 LFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCN--H 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V L +Q+H+ GF S + V N+ L+
Sbjct: 154 VGLIRQLHSLA-FSSGFDSYVSVKNS-------------------------------LLT 181
Query: 128 AYANNGDMESAGGLFNEL--PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
Y+ NG +E A +FN + ++D+V+W +M+ Y Q+ + +A+ + M + G E D
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS-IDDAYRI 244
TL V++ + + + A +GF N VGS LIDMY+KCG+ + ++ ++
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFN--KNRHVGSGLIDMYAKCGAGMSESRKV 299
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHA-AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F + ++ +++MI G++ + A++ F M + P+ +F+ ++ACS++
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSS 359
Query: 304 KCYGVS----------PSTDHYA--CMVDLLGRAGCLEEALKMVEKMP 339
G PS +V + + G L++A K+ ++MP
Sbjct: 360 PSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 41/251 (16%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLK-DSISLYCSMRREGIGPVSFTLSALFKA 61
S R VFE++ + +W +I GY L +++ + M+R G P + A
Sbjct: 294 SESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISA 353
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ + S G+Q HA + ++ + V N ++ MY KCG L +RK+F MP+ + V+
Sbjct: 354 CSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVT 413
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
+I GY Q+ E++ FE+M A +
Sbjct: 414 LNSIIA-------------------------------GYAQHGIGTESLNLFEQMLAASI 442
Query: 182 ETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
+TLV ++SACA G + KY N + +I FG S +ID+ + G
Sbjct: 443 APTSITLVSILSACAHTGRVEEGKKYFNMMKDI-----FGIEPEAEHYSCMIDLLGRAGK 497
Query: 238 IDDAYRIFVGM 248
+ +A R+ M
Sbjct: 498 LSEAERLIDTM 508
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 273/443 (61%), Gaps = 15/443 (3%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DVVSWT ++ G ++ A +F+ +P ++ V+W +M++GYV+ + +A+E F+ M+
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GVE + + AC G + + E SG + + +A++DMY KCG
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIE--VDAKLATAVVDMYCKCGC 280
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+D+A+ +F + R + +++ MI GFA+HGR A++LF M P+ VT + VLTA
Sbjct: 281 VDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTA 340
Query: 298 CSHVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+H G + +G+ P +HY CMVDL GRAG L+EA K++++MP++P+
Sbjct: 341 CAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA 400
Query: 346 VWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
V GALLGAC+IH + ++ + + +L+PD G Y++L+N+ A AG WD+V +VRRL+
Sbjct: 401 VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMD 460
Query: 406 MTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVL 465
+ K G S +E D G EFR G+L HP + EI D++ R++A+GY P+ L
Sbjct: 461 ERNVSKEAGRSVIEVD-GEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEAL 519
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
+DV++E+K+ L+ HSEKLA+AFGLL P T+RI KNLR+C DCH S+V GRE
Sbjct: 520 HDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGRE 579
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
IVVRD RFHHF+DG CSC +YW
Sbjct: 580 IVVRDRSRFHHFKDGMCSCKDYW 602
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 35/258 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N W ++I GY+ D++ ++ MR G+ F ++ ACT
Sbjct: 184 REVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGA 243
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++I+ + + G D + ++ MY KCG + + VFD +P R + +W
Sbjct: 244 GALGRGREIY-RWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTW--- 299
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M+ G+ + + +A+E F +M+ AGV D
Sbjct: 300 ----------------------------NCMIGGFAVHGRCDDALELFHQMEAAGVAPDD 331
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VTL+ V++ACA G + ++ I G P ++D++ + G +D+A ++
Sbjct: 332 VTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHY--GCMVDLFGRAGQLDEAKKV 389
Query: 245 FVGMKQRNVFSYSSMILG 262
M + +LG
Sbjct: 390 IDEMPMDPDLAVLGALLG 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + + W +I G+ + G D++ L+ M G+ P TL + AC +
Sbjct: 287 VFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGE 346
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
VS G++ + G M+ ++ + G L ++KV DEMP + D+ L+
Sbjct: 347 VSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALL 406
Query: 127 VAYANNGDME 136
A +GD++
Sbjct: 407 GACKIHGDVD 416
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 306/543 (56%), Gaps = 45/543 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++ Y+ KD+I LY M+ + P T +L AC+ DV LG+ +H Q I
Sbjct: 231 WNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQ-I 286
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ ++ VGN ++ MY KCG +R VFD+M +R ++SWT +I AY + A
Sbjct: 287 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 346
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF ++ +K G Q KP D + V +++ACA +
Sbjct: 347 HLFQQMLELEK-------NGSSQRVKP-----------------DALAFVTILNACADVS 382
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSS 258
++ V E A G ++ VG+A++++Y KCG I++A RIF + R +V +++
Sbjct: 383 ALEQGKMVSEQAASCGLS--SDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNA 440
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----KCYGVSPSTD- 313
MI +A G++H A++LF M +P+ +F+ +L ACSH GL K Y S +T+
Sbjct: 441 MIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY 500
Query: 314 --------HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
H+ C+ DLLGR G L+EA + +EK+PV+P+ W +LL AC+ HR+ + A+
Sbjct: 501 RNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 560
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
AN L LEP Y+ LSNIYA W V++VR+ + G+KK G S +E + +
Sbjct: 561 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGK-YM 619
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H+F GD HP + EI++ L L +++ GY P+ + VL+ V ++EK+R+L +HSE+LA
Sbjct: 620 HDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLA 679
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+A GL++T G +R+ KNLR+C DCH S++ GR+IVVRD RFH F+DGKCSC
Sbjct: 680 IALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQ 739
Query: 546 NYW 548
+YW
Sbjct: 740 DYW 742
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 179/374 (47%), Gaps = 64/374 (17%)
Query: 3 SFPRLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
S + VF ++ + +N W+ + + L G++ +++ + M GI + + A
Sbjct: 110 SHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSA 169
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ V G+ IH+ I L GF S+L V N ++ MY +CG + +RKVFD M E
Sbjct: 170 CSSPALVQDGRMIHS-CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE----- 223
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+D V+W M++ YV N + ++AI+ ++RMQ +
Sbjct: 224 ------------------------ALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---L 256
Query: 182 ETDYVTLVGVISACAQ-----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
D VT V ++SAC+ LG + + V + E NV+VG+AL+ MY+KCG
Sbjct: 257 RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE-------KNVIVGNALVSMYAKCG 309
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-------TKPNGV 289
S +A +F M+QR++ S++++I + A LF M++ E KP+ +
Sbjct: 310 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 369
Query: 290 TFIGVLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKM 338
F+ +L AC+ V G S +C +V+L G+ G +EEA ++ + +
Sbjct: 370 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAV 429
Query: 339 PVEPNGGVWGALLG 352
P+ +W A++
Sbjct: 430 CSRPDVQLWNAMIA 443
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 151/297 (50%), Gaps = 40/297 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+ ++ +N + WT L+ + + G K+++ MR++G+ P + T +C +
Sbjct: 12 KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 71
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTE 124
+ G +IH Q ++ D V N ++ MY KCG L +++VF +M R+V+SW+
Sbjct: 72 ESLRDGIRIH-QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 130
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ A+A +G++ W EA+ +F M G++
Sbjct: 131 MAGAHALHGNV-----------------W--------------EALRHFRFMLLLGIKAT 159
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+V ++SAC+ +++ + SGF + ++V +A++ MY +CG++++A ++
Sbjct: 160 KSAMVTILSACSSPALVQDGRMIHSCIALSGFE--SELLVANAVMTMYGRCGAVEEARKV 217
Query: 245 FVGMKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
F M + R+V S++ M+ + + R AIQL+ M + +P+ VT++ +L+ACS
Sbjct: 218 FDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACS 271
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 15/275 (5%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
YA+ A F+ L ++ +WT +V + + + +E + ERM+ GV D VT
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
+ + +C ++ + ++ S + V +AL++MY KCGS+ A R+F M
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEI--DPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 249 KQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
++ RNV S+S M A+HG A++ F M+ K + +L+ACS L
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 304 ----KCYGVSPSTDHY---ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
C +S ++ + GR G +EEA K+ + M V ++ + +
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASA 391
H + I +L PDK+ Y+ L + +SA
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKV-TYVSLLSACSSA 273
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY+ C S DA F ++QRN++S++ ++ FA+ G++ ++ M + +P+ VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 291 FIGVLTACS-----HVGLKCYG--------VSPSTDHYACMVDLLGRAGCLEEALKMVEK 337
FI L +C G++ + + P + ++++ + G L A ++ K
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAK 118
Query: 338 MPVEPNGGVWGALLGACQIHRN 359
M N W + GA +H N
Sbjct: 119 MERTRNVISWSIMAGAHALHGN 140
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 25/268 (9%)
Query: 6 RLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R +F+ V + LW A+I Y G +++ L+ M EG+ P SF+ ++ AC+
Sbjct: 423 RRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSH 482
Query: 65 V-LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSW 122
L+ + T T + + + + G L + + +++P + D V+W
Sbjct: 483 TGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAW 542
Query: 123 TELIVAYANNGDMESAGGLFNE-LPLKDKVA--WTAMVTGYVQNAKPREAIEYFERMQYA 179
T L+ A N+ D++ A + N+ L L+ + A + A+ Y + K + + M
Sbjct: 543 TSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQ 602
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK---CG 236
GV+ + GV I+ ++ + A G P N + L ++S+ CG
Sbjct: 603 GVKKER----GV-------STIEIGKYMHDFATGDDAHP-RNREIREELAKLHSQMKECG 650
Query: 237 SIDDAYRI--FVG--MKQRNVFSYSSMI 260
+ D + FV K+R +FS+S +
Sbjct: 651 YVPDTKMVLHFVDEQEKERLLFSHSERL 678
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 205/610 (33%), Positives = 318/610 (52%), Gaps = 71/610 (11%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTL-------SAL 58
R VFE + +N WTA+++GY+ +G + ++ SL+ M VS+T+
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN--EVSWTVMFGGLIDDGR 156
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGF-----------------TSDLYVGNTMIGMYVKC 101
++ D+ + + A T ++GG ++ TMI Y +
Sbjct: 157 IDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 102 GFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLK------------- 148
+ +RK+F+ MPE+ VSWT +++ Y +G +E A F +P+K
Sbjct: 217 NRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 149 ------------------DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
D W M+ Y + EA++ F +MQ GV + +L+
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
++S CA L ++Y V F ++V V S L+ MY KCG + A +F
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG--- 307
+++ ++S+I G+A HG A+++F +M + T PN VT I +LTACS+ G G
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 308 ---------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHR 358
V+P+ +HY+C VD+LGRAG +++A++++E M ++P+ VWGALLGAC+ H
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 359 NPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWL 418
++A++AA LFE EPD G Y++LS+I AS W DV+ VR+ ++ + K PG SW+
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 419 EGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILM 478
E + V R G HP I L L+ GY P+ VL+DV +EEK L
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 479 THSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQ 538
HSE+LA+A+GLL G +R+MKNLR+C DCH + S+V REI++RD RFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 539 DGKCSCGNYW 548
+G+CSC +YW
Sbjct: 695 NGECSCRDYW 704
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 92 NTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKV 151
N+++ Y G +R++FDEM ER+VVSW L+ Y N + A +F +P ++ V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 152 AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
+WTAMV GY+Q EA F RM E + V+ + G I A + ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 212 EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P+ +VV + +I + G +D+A IF M++RNV ++++MI G+ + R
Sbjct: 168 ------PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV 221
Query: 272 AIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC--MVDLLGRAGCL 328
A +LF M KTE + L+ + + V P AC M+ G G +
Sbjct: 222 ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEI 281
Query: 329 EEALKMVEKMPVEPNGGVWGALLGA 353
+A ++ + M N W ++ A
Sbjct: 282 SKARRVFDLMEDRDN-ATWRGMIKA 305
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 307/543 (56%), Gaps = 47/543 (8%)
Query: 18 FLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQ 77
F + +++ + G ++++ + M E + T + C ++ D+ LG ++HA+
Sbjct: 187 FSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHAR 246
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+L GG D +VG+ +I MY KCG + +R VFD
Sbjct: 247 -LLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFD------------------------- 280
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
GL N ++ V WTA++T Y+QN E++ F M G + T +++ACA
Sbjct: 281 --GLQN----RNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAG 334
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+ +++ + + E GF N+V+V +ALI+MYSK GSID +Y +F M R++ +++
Sbjct: 335 IAALRHGDLLHARVEKLGFK--NHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWN 392
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
+MI G++ HG A+Q+F DMV E PN VTFIGVL+A SH+GL +
Sbjct: 393 AMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRN 452
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
+ + P +HY CMV LL RAG L+EA ++ V+ + W LL AC +HRN ++ +
Sbjct: 453 FKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRR 512
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
A + +++P +G Y +LSN+YA A WD V +R+L++ +KK PG SWL+ R I
Sbjct: 513 IAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLD-IRNDI 571
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H F + HP S +I + + LL ++ GY PN+ SVL+DV DE+K+ L HSEKLA
Sbjct: 572 HVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLA 631
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
LA+GL+ A +RI+KNLR+C+DCH + S+V R I+VRD RFHHF+DG C+C
Sbjct: 632 LAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCL 691
Query: 546 NYW 548
++W
Sbjct: 692 DHW 694
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 34/298 (11%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKAC 62
R +F+ + +N W L+ GY+ G+ + + L+ +M + P + + AC
Sbjct: 68 LARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSAC 127
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+ V G Q H + G YV + ++ MY +C + + +V D +P V
Sbjct: 128 SHGGRVKEGMQCHG-LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHV--- 183
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
D ++ +++ V++ + EA+E RM V
Sbjct: 184 -------------------------NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVA 218
Query: 183 TDYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
D+VT VGV+ CAQ+ ++ V + G G + + VGS LIDMY KCG + +A
Sbjct: 219 WDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG---GLMFDEFVGSMLIDMYGKCGEVLNA 275
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
+F G++ RNV +++++ + +G ++ LF M + T PN TF +L AC+
Sbjct: 276 RNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACA 333
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 32/197 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ ++ +N +WTAL+ Y+ G+ ++S++L+ M REG P +T + L AC +
Sbjct: 276 RNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGI 335
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G +HA+ L GF + + V N +I MY K G + S VF +M RD+++W +
Sbjct: 336 AALRHGDLLHARVEKL-GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAM 394
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y+++G ++A++ F+ M A +Y
Sbjct: 395 ICGYSHHG-------------------------------LGKQALQVFQDMVSAEECPNY 423
Query: 186 VTLVGVISACAQLGVIK 202
VT +GV+SA + LG++K
Sbjct: 424 VTFIGVLSAYSHLGLVK 440
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 57/312 (18%)
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVG--NTMIGMYVKCGFLGCSRKVFDEMPERDV 119
C +V + G+ +HAQ ++ ++ ++ N+++ +YVKCG LG +R +FD MP R+V
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
VSW L+ Y + G+ L+ V + MV+ +QNA P E +
Sbjct: 82 VSWNVLMAGYLHGGN-----------HLEVLVLFKNMVS--LQNACPNEYV--------- 119
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG----FGPINNVVVGSALIDMYSKC 235
+SAC+ G +K E + G FG + + V SAL+ MYS+C
Sbjct: 120 --------FTTALSACSHGGRVK------EGMQCHGLLFKFGLVCHQYVKSALVHMYSRC 165
Query: 236 GSIDDAYRIF---VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
++ A ++ G ++FSY+S++ GR A+++ MV + VT++
Sbjct: 166 SHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYV 225
Query: 293 GVLTACSHV-----GLKCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
GV+ C+ + GL+ + G+ + ++D+ G+ G + A + + +
Sbjct: 226 GVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ-N 284
Query: 342 PNGGVWGALLGA 353
N VW AL+ A
Sbjct: 285 RNVVVWTALMTA 296
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 308/546 (56%), Gaps = 53/546 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VFE + ++ W +I G G +D++ + M + P SFTLS++ E
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+++ G++IH I G+ +D+++G+++I MY KC + S +VF
Sbjct: 210 VNLLKGKEIHGYAIR-NGYDADVFIGSSLIDMYAKCTRVDDSCRVF-------------- 254
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
LP D ++W +++ G VQN E +++F++M A ++ ++
Sbjct: 255 -----------------YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 297
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V+ ++ ACA L + + S F NV + SAL+DMY+KCG+I A IF
Sbjct: 298 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD--GNVFIASALVDMYAKCGNIRTARWIF 355
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M+ ++ S+++MI+G+A+HG A+ AI LF M KPN V F+ VLTACSH GL
Sbjct: 356 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 415
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +HYA + DLLGR G LEEA + + M +EP G VW LL A
Sbjct: 416 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N E+A+ + LF ++P IG Y++LSNIY++AG W D ++R ++ G+KK P
Sbjct: 476 CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 535
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
SW+E + +H F AGD +HP I +AL LL++++ +GY + VL+DV +E+K
Sbjct: 536 ACSWIE-IKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQK 594
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L +HSE+LA+ FG+++T G T+R+ KNLR+C DCH S+++GREIV
Sbjct: 595 RYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV------ 648
Query: 534 FHHFQD 539
F+ F D
Sbjct: 649 FYFFLD 654
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 50/286 (17%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G TSD+Y Y LG RKVF+ MP+RD+VSW +I
Sbjct: 130 GKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSWNTVI---------------- 168
Query: 143 NELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIK 202
+G QN +A+ M A + D TL V+ A+ +
Sbjct: 169 ---------------SGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL 213
Query: 203 YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
+ A +G+ +V +GS+LIDMY+KC +DD+ R+F + Q + S++S+I G
Sbjct: 214 KGKEIHGYAIRNGYDA--DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 271
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDH- 314
+G ++ F M+ + KPN V+F ++ AC+H+ L Y + D
Sbjct: 272 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN 331
Query: 315 ---YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ +VD+ + G + A + +KM + + W A++ +H
Sbjct: 332 VFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALH 376
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 312/557 (56%), Gaps = 49/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE-GIGPVSFTLSALFKACTE 64
R +F+++ K+ WTA+I Y ++++ L+ M++E G+ S + ++ A +
Sbjct: 12 RKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQ 71
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV +H +L VGN+++ M+ KCG +R VFD M ERDV
Sbjct: 72 LGDVKNAHTVHGYA-FRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDV----- 125
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++W +M++GY QN + EA+ F+ M+ + +
Sbjct: 126 --------------------------ISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPT 159
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + ++SACA LG + S N+ +AL+DMY+KCG ++ A +
Sbjct: 160 PVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNL--SNALMDMYAKCGDLEKAVDL 217
Query: 245 FVGM--KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F G+ +RN S++ +I G+ MHG A++LF M + +PN TF +L+ACSH G
Sbjct: 218 FNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAG 277
Query: 303 L-----KCYG------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L KC+ V+ H+AC+VD+LGRAG L+EA ++++MP P+ GVWGALL
Sbjct: 278 LIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALL 337
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
AC+IH N E+ + AA++L +LEP+ G Y+++SNIYA++ W +V ++R+ +K GLKK
Sbjct: 338 LACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKK 397
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
+S +E + ++ F D +P E+ + + L ++ GY P+L L+DV +E
Sbjct: 398 PAAFSMIEYGKDIL-GFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEE 456
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
+K+R+L HSEKLA+AFG+L PG +R+ KNLR+C DCH S + R+I+VRD
Sbjct: 457 DKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDA 516
Query: 532 MRFHHFQDGKCSCGNYW 548
RFHHFQ G CSC +YW
Sbjct: 517 NRFHHFQGGTCSCKDYW 533
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 152/285 (53%), Gaps = 22/285 (7%)
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA-GVETDYVT 187
YA G +F+E+ KD V WTAM+T Y Q KP EA+ F++MQ G+ D +
Sbjct: 2 YAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIA 61
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGP--INNVVVGSALIDMYSKCGSIDDAYRIF 245
+V V SA QLG +K A+ V G F I + VG++++ M++KCG+ + A +F
Sbjct: 62 VVSVASAVGQLGDVKNAHTV----HGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVF 117
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M +R+V S++SM+ G+ +G+A A+ LF +M ++ +P VT + +++AC+++G +
Sbjct: 118 DMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRH 177
Query: 306 YG-----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKM-PVEPNGGVWGALLGA 353
G + T+ ++D+ + G LE+A+ + + P E N G W L+
Sbjct: 178 LGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISG 237
Query: 354 CQIHRNPEIAQIAANHLFE--LEPDKIGNYIILSNIYASAGMWDD 396
+H + + A + + E +EP+ ILS + AG+ D+
Sbjct: 238 YGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSAC-SHAGLIDE 281
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/546 (36%), Positives = 303/546 (55%), Gaps = 52/546 (9%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N WTA+I G++ + + ++ L+C M REG+ P FT S + SL Q+H
Sbjct: 372 NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLH 427
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
AQ I + ++++P T L+ AY G++
Sbjct: 428 AQII----------------------------KAYYEKVPS----VATALLDAYVKTGNV 455
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISAC 195
+ +F +P KD VAW+AM+TG Q +A+E F ++ GV+ + T VI+AC
Sbjct: 456 VESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515
Query: 196 AQ-LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVF 254
+ +++ + A SG N + V SAL+ MYSK G+I+ A ++F ++R++
Sbjct: 516 SSSAATVEHGKQIHATAVKSG--KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573
Query: 255 SYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----------- 303
S++SMI G+ HG A A+++F M + VTFIGVLTAC+H GL
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633
Query: 304 -KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEI 362
K Y + +HY+CMVDL RAG ++A+ ++ MP + +W LL AC++HRN E+
Sbjct: 634 IKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLEL 693
Query: 363 AQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDR 422
++AA L L+P+ Y++LSNI+A AG W++ + VR+L+ +KK G SW+E +
Sbjct: 694 GKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE-IK 752
Query: 423 GVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSE 482
I F AGD++HP S + L +L +L+ GYQP+ V +DV +E K+ IL HSE
Sbjct: 753 NRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSE 812
Query: 483 KLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKC 542
+LA+A+GL+ PGA ++I KNLRIC DCH + S + R ++VRD+ RFHHF+ G C
Sbjct: 813 RLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVC 872
Query: 543 SCGNYW 548
SCG YW
Sbjct: 873 SCGGYW 878
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 49/369 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ KN WT+L+ GY G + I L M+ EG+ P FT + + A +
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+HA I+ GF +V N +I MY+K +G + VFD M RD V+W +
Sbjct: 219 SIIEGGVQVHAM-IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIM 277
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA A G + E + F RM+ AGV+
Sbjct: 278 IGGYA-------AIGFY------------------------LEGFQMFHRMRLAGVKLSR 306
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ C+Q + + + C + + +G+ + + +AL+ YSKC S+D+A+++
Sbjct: 307 TVFCTALKLCSQQRELNFTKQLHCGVVK-NGYEFAQD--IRTALMVTYSKCSSVDEAFKL 363
Query: 245 F-VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA------ 297
F + NV ++++MI GF + A+ LF M + +PN T+ VL
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 298 ---CSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ + Y PS ++D + G + E+ ++ +P + + W A+L
Sbjct: 424 SQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGL 480
Query: 355 QIHRNPEIA 363
R+ E A
Sbjct: 481 AQTRDSEKA 489
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 160/377 (42%), Gaps = 48/377 (12%)
Query: 1 MDSFPRL---VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSA 57
+ S PR +F++ K+ + L+ + H ++++ L+ + G+G TLS
Sbjct: 50 LPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
K C + D +G+Q+H Q+ L GF D+ VG +++ MY+K
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQS-LKSGFLEDVSVGTSLVDMYMK----------------- 151
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
TE D E G+F+E+ +K+ V+WT++++GY +N E I +MQ
Sbjct: 152 -----TE---------DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV + T V+ A A +I+ V + +GF V +ALI MY K
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFE--FTTFVCNALICMYLKSEM 255
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
+ DA +F M R+ +++ MI G+A G Q+F M K + F L
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 298 CS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CS H G+ G + D ++ + ++EA K+ N
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 347 WGALLGACQIHRNPEIA 363
W A++G + N E A
Sbjct: 376 WTAMIGGFVQNNNNEKA 392
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 42/246 (17%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE-VL 66
VF + K+ W+A++ G + ++ ++ + +EG+ P +T S++ AC+
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V G+QIHA T + G ++ L V + ++ MY K G + + KVF ERD+VSW +I
Sbjct: 521 TVEHGKQIHA-TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMI 579
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
Y +GD ++A+E F+ MQ G+ D V
Sbjct: 580 TGYGQHGD-------------------------------AKKALEVFQIMQNQGLPLDDV 608
Query: 187 TLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T +GV++AC G++ KY N + + + + S ++D+YS+ G D A
Sbjct: 609 TFIGVLTACTHAGLVEEGEKYFNIMIK-----DYHIDKKIEHYSCMVDLYSRAGMFDKAM 663
Query: 243 RIFVGM 248
I GM
Sbjct: 664 DIINGM 669
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 279/445 (62%), Gaps = 17/445 (3%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DVVSWT ++ G + A LF+ +P ++ V+W AM++GYV+ + +A+E F+ M+
Sbjct: 164 DVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMR 223
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV+ + + AC G + V E SG + + +A++DMY KCG
Sbjct: 224 ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQ--MDEKLATAVVDMYCKCGC 281
Query: 238 IDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+++A+R+F + + + + +++ MI GFA+HGR A++LFG M + P+ VT + VL
Sbjct: 282 VEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVL 341
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
TAC+H G+ + YG+ P +HY CMVDL GRAG LEEA K+++ MP+EP+
Sbjct: 342 TACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPD 401
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
GV GAL GA +IH + ++ + + EL+P G Y++L+N+ A+AG W+DV+RVRRL
Sbjct: 402 VGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRL 461
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
+ + K G S +E +G + EF+ G L HP + E+ D++ +++A+GY P+ R
Sbjct: 462 MDERNVSKEAGRSVIEV-QGEVCEFQCGGLCHPRAEEVYAMASDMMRKIRAEGYVPDTRD 520
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
VL+ +++EEK+ L+ HSEKLA+AFGLL T PG T+RI KNLR+C DCH S+V
Sbjct: 521 VLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFE 580
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
R+IVVRD RFHHF+DG+CSC +YW
Sbjct: 581 RQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ + +N W A++ GY+ D++ ++ MR G+ F + ACT
Sbjct: 185 RVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGA 244
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+++H + + G D + ++ MY KCG + + +VF+ +P
Sbjct: 245 GALARGREVH-RWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALP---------- 293
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
L K W M+ G+ + + ++A++ F RM+ GV D
Sbjct: 294 -------------------LAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDD 334
Query: 186 VTLVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VTLV V++ACA G++ Y N+V + +G + ++D+Y + G +++A
Sbjct: 335 VTLVNVLTACAHAGMLSEGRHYFNYVPQ-----RYGIEPKMEHYGCMVDLYGRAGRLEEA 389
Query: 242 YRIFVGM 248
++ M
Sbjct: 390 KKVIQDM 396
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/548 (37%), Positives = 303/548 (55%), Gaps = 54/548 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +++ Y+ ++ LY M G+ FTL+++ A T V D+ G Q HA+ +
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAK-L 266
Query: 80 LLGGFTSDLYVGNTMIGMYVKCG--FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ G+ + +VG+ +I +Y KCG L C RKVFDE+ D+V
Sbjct: 267 IKSGYHQNSHVGSGLIDLYSKCGGCMLDC-RKVFDEISNPDLV----------------- 308
Query: 138 AGGLFNELPLKDKVAWTAMVTGY-VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
W M++GY + EA+E F ++Q G D +LV VISAC+
Sbjct: 309 --------------LWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACS 354
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ V +A P N + V +ALI MYSKCG++ DA +F M + N SY
Sbjct: 355 NMSSPSQGRQVHGLALKLDI-PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSY 413
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
+SMI G+A HG ++ LF M++ P +TFI VL AC+H G +
Sbjct: 414 NSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQ 473
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
+G+ P H++CM+DLLGRAG L EA +++E +P +P W ALLGAC+IH N E+A
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAI 533
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AAN L +L+P Y++L+NIY+ G D + VR+L++ G+KK PG SW+E +R
Sbjct: 534 KAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRR- 592
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD----EEKKRILMTH 480
IH F A D HP +IQ+ L +++ +++ GY P +RS L D E++ L H
Sbjct: 593 IHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHH 652
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SEKLA++FGL++T G + + KNLRIC DCH + S+V+ REI VRD+ RFH F+DG
Sbjct: 653 SEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDG 712
Query: 541 KCSCGNYW 548
+CSCG YW
Sbjct: 713 QCSCGGYW 720
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 160/317 (50%), Gaps = 23/317 (7%)
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFT-SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
K C D+ G+ +HA + + F + Y+ N + +Y KC L +R+VFD +
Sbjct: 14 FLKTCIAHRDLRTGKSLHA--LYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHD 71
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+V S+ LI AYA +E A LF+E+P D V++ ++ Y + + A + F M
Sbjct: 72 CNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEM 131
Query: 177 QYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+ A ++ D TL G+I+AC +G+I+ + + + G + V VG+ALI YSK
Sbjct: 132 REAFLDMDGFTLSGIITACGINVGLIRQLHALSVVT-----GLDSYVSVGNALITSYSKN 186
Query: 236 GSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G + +A RIF + + R+ S++SM++ + H A++L+ +M + T V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 295 LTACSHV-----GLKCY------GVSPSTDHYACMVDLLGR-AGCLEEALKMVEKMPVEP 342
LTA ++V GL+ + G ++ + ++DL + GC+ + K+ +++ P
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS-NP 305
Query: 343 NGGVWGALLGACQIHRN 359
+ +W ++ ++ +
Sbjct: 306 DLVLWNTMISGYSLYED 322
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 174/369 (47%), Gaps = 60/369 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ + + LI Y +G + + L+ MR + FTLS + AC ++
Sbjct: 96 LFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG--IN 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELI 126
V L +Q+HA ++ + G S + VGN +I Y K GFL +R++F + E RD VSW ++
Sbjct: 154 VGLIRQLHALSV-VTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMV 212
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
VA Y+Q+ + +A+E + M G+ D
Sbjct: 213 VA-------------------------------YMQHREGSKALELYLEMTVRGLIVDIF 241
Query: 187 TLVGVISACAQ----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS-IDDA 241
TL V++A LG +++ + + SG+ N VGS LID+YSKCG + D
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIK----SGYH--QNSHVGSGLIDLYSKCGGCMLDC 295
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F + ++ +++MI G++++ + A++ F + +P+ + + V++ACS+
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSN 355
Query: 301 V-----GLKCYGVSPSTDHYA-------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+ G + +G++ D + ++ + + G L +A + + MP E N +
Sbjct: 356 MSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYN 414
Query: 349 ALLGACQIH 357
+++ H
Sbjct: 415 SMIAGYAQH 423
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACT 63
R VF+++ + LW +I GY L L D +L C + + +G P +L + AC+
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDE-ALECFRQLQVVGHRPDDCSLVCVISACS 354
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ S G+Q+H + L ++ + V N +I MY KCG L ++ +FD MPE + VS+
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA +G G+ +++ F+RM G
Sbjct: 415 SMIAGYAQHG------------------------MGF-------QSLHLFQRMLEMGFTP 443
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T + V++ACA G ++ + + FG S +ID+ + G + +A R
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMK-QKFGIEPEAGHFSCMIDLLGRAGKLSEAER 502
Query: 244 IFVGMKQRNVFSYSSMILGFA-MHGRAHAAIQ 274
+ + F + S +LG +HG AI+
Sbjct: 503 LIETIPFDPGFFFWSALLGACRIHGNVELAIK 534
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 323/561 (57%), Gaps = 51/561 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPV-SFTLSALFK 60
S+ +F + Y + W A+IRG L +++ Y +M G+ + + T S K
Sbjct: 52 SYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALK 111
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L S Q+H+Q +L GF +D V+
Sbjct: 112 ACARALARSEAIQLHSQ-LLRFGFNAD-------------------------------VL 139
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T L+ AYA GD++ A LF+E+P D +W A++ G+ Q ++P +AI F+RM+ G
Sbjct: 140 LQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDG 199
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ + VT+ G + AC+QLG +K V + +NV V + +IDMY+KCGS+D
Sbjct: 200 NLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLN--SNVQVCNVVIDMYAKCGSMD 257
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
AY +F M+ +++ ++++MI+ FAMHG H A+ LF + ++ P+ V+++ VL AC
Sbjct: 258 KAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCAC 317
Query: 299 SHVGL-----KCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+H GL K + G+ P+ HY MVDLLGRAG L+EA +V +P PN +W
Sbjct: 318 NHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLW 376
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LLGAC+ + + E+A++A+ L E+ G++++LSN+YA+ WDDV RVR ++
Sbjct: 377 QTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRR 436
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+KK PG+S++E +G +++F GD +H + EI L ++ R++A GY + +VL+D
Sbjct: 437 DVKKTPGFSYIE-IKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHD 495
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ DE+K+ L HSEKLA+AFGL T G ++++KNLRIC DCH+ + S++ REI+
Sbjct: 496 IGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREII 555
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFH F++G CSC +YW
Sbjct: 556 VRDRTRFHRFKEGLCSCKDYW 576
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 27/307 (8%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--VET 183
+ A ++ GD+ A +F +P W A++ G ++ P A+ ++ M +
Sbjct: 42 LCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRI 101
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +T + ACA+ + + + ++ FG +V++ + L+D Y+K G +D A +
Sbjct: 102 DALTCSFALKACAR--ALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQK 159
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVG 302
+F M Q ++ S++++I GFA R AI F M V +PN VT G L ACS +G
Sbjct: 160 LFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLG 219
Query: 303 LKCYGVSP---------STDHYAC--MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
G S +++ C ++D+ + G +++A + E M + + W ++
Sbjct: 220 ALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMI 279
Query: 352 GACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
A +H + A LFE + PD + +Y+ + AG+ +D ++ +
Sbjct: 280 MAFAMHGDGH----KALDLFEKLGRSGMSPDAV-SYLAVLCACNHAGLVEDGLKLFNSMT 334
Query: 406 MTGLKKN 412
GL+ N
Sbjct: 335 QRGLEPN 341
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/598 (34%), Positives = 319/598 (53%), Gaps = 71/598 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + +NPF+ ALIRG + S+ + M R G+ P T + K+ +++
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 68 VSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPER----DVVSW 122
LG+ +HA T L F D +V +++ MY K G L + +VF+E P+R ++ W
Sbjct: 142 RWLGRALHAAT--LKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE-------- 174
LI Y DM A LF +P ++ +W+ ++ GYV + + A + FE
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 175 -----------------------RMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIA 211
M G++ + T+ V+SAC++ G +
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL---------- 309
Query: 212 EGSGF---------GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILG 262
GSG G + +G+AL+DMY+KCG +D A +F M +++ S+++MI G
Sbjct: 310 -GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC---SHVGLKC---------YGVSP 310
+A+HGR H AIQ F M+ + KP+ V F+ VLTAC S V L Y + P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 311 STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL 370
+ HY +VDLLGRAG L EA ++VE MP+ P+ W AL AC+ H+ A+ + +L
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Query: 371 FELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRA 430
EL+P+ G+YI L +AS G DV + R L+ +++ G+S++E D G +++F A
Sbjct: 489 LELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELD-GQLNKFSA 547
Query: 431 GDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGL 490
GD +H + EI L +++ GY P ++D+ +EEK+ + HSEKLAL G
Sbjct: 548 GDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGF 607
Query: 491 LTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
L T+PG T+RI+KNLRIC DCH M S++ R+I++RD +FHHF+DG+CSCG+YW
Sbjct: 608 LRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 24/199 (12%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
V + L+ S S D + IF ++RN F +++I G + R ++++ F M++
Sbjct: 62 VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLG 121
Query: 284 TKPNGVTFIGVLTACSHVGLKCYG----VSPSTDHYAC-------MVDLLGRAGCLEEAL 332
KP+ +TF VL + S +G + G + + C +VD+ + G L+ A
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAF 181
Query: 333 KMVEKMP---VEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNI 387
++ E+ P + + +W L+ G C R ++ A LF P++ G++ L
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYC---RAKDMHM--ATTLFRSMPERNSGSWSTLIKG 236
Query: 388 YASAGMWDDVSRVRRLLKM 406
Y +G +++R ++L ++
Sbjct: 237 YVDSG---ELNRAKQLFEL 252
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 309/545 (56%), Gaps = 52/545 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACTEVLDVSLGQQIHAQ 77
W +LI GY +G+L + M R +G P T ++ AC + G IH
Sbjct: 9 WNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIH-- 66
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
G+ +K G L E VV+ L+ Y GD+ S
Sbjct: 67 ------------------GLVMKSGVL----------EEVKVVN--ALMNLYGKTGDLIS 96
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
+ LF +L +K+ V+W M+ ++QN E + YF ++ G++ D T + V+ C
Sbjct: 97 SCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCED 156
Query: 198 LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+GV++ + + + GF N + +AL+D+Y+K G ++D+ +F+ + + +++
Sbjct: 157 IGVVRLSQGIHGLIMFCGFNA--NTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWT 214
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KC 305
+M+ +A HG AI+ F MV P+ VTF +L ACSH GL K
Sbjct: 215 AMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKR 274
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
Y + P DHY+CMVDL+GR+G L++A ++++MP+EP+ GVWGALLGAC+++++ ++
Sbjct: 275 YRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 334
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLE-GDRGV 424
AA LFELEP NYI+LSNIY+++G+W D SR+R L+K GL + GYS++E G++
Sbjct: 335 AAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNK-- 392
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKRILMTHSEK 483
IH+F GD +HP S +IQ+ L ++ +++++ G++ VL+DV ++ K+ ++ HSEK
Sbjct: 393 IHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEK 452
Query: 484 LALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
+A+AFGLL SP + I KNLRIC DCH S + R I++RD+ RFHHF +G CS
Sbjct: 453 IAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCS 512
Query: 544 CGNYW 548
C +YW
Sbjct: 513 CRDYW 517
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+FE + KN W +I ++ G ++ ++ + R G+ P T A+ + C ++
Sbjct: 100 LFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGV 159
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V L Q IH I+ GF ++ + ++ +Y K G L S VF E+ D ++WT ++
Sbjct: 160 VRLSQGIHG-LIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLA 218
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AYA +G R+AI++FE M + G+ D+VT
Sbjct: 219 AYATHG-------------------------------YGRDAIKHFELMVHYGLSPDHVT 247
Query: 188 LVGVISACAQLGVIKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+++AC+ G+++ + E +++ P + S ++D+ + G + DAY +
Sbjct: 248 FTHLLNACSHSGLVEEGRYYFETMSKRYRIEP--RLDHYSCMVDLMGRSGLLQDAYGLIK 305
Query: 247 GM 248
M
Sbjct: 306 EM 307
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 47/257 (18%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MPERD+V+W LI YA G + G F E
Sbjct: 1 MPERDLVAWNSLISGYAGRGYL---GKCF----------------------------EVL 29
Query: 174 ERMQYA--GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
RM + G + VT + +ISAC G VC G + V V +AL+++
Sbjct: 30 SRMMRSEVGFRPNEVTFLSMISACVHGG--NKEEGVCIHGLVMKSGVLEEVKVVNALMNL 87
Query: 232 YSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
Y K G + + ++F + +N+ S+++MI+ +G A + F KP+ TF
Sbjct: 88 YGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATF 147
Query: 292 IGVLTACSHVG-----------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
+ VL C +G + G + +T ++DL + G LE++ + ++
Sbjct: 148 LAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEI-T 206
Query: 341 EPNGGVWGALLGACQIH 357
P+ W A+L A H
Sbjct: 207 SPDSMAWTAMLAAYATH 223
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 268/448 (59%), Gaps = 53/448 (11%)
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
MPER++VSW ++ + G++E A GLF+E+P +D V+W +M+ Y Q KP EA+ F
Sbjct: 1 MPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 60
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
++MQ GV N +VG+AL+DMY+
Sbjct: 61 DQMQAVGV---------------------------------------NSIVGTALVDMYA 81
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG I A ++F M+ ++V +++++I G A+ G A QLF +M + +PN +TF+
Sbjct: 82 KCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVA 141
Query: 294 VLTACSHVG--------LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+L+ACSH G L C YG+ P +HY C++DLL RAG LEEA++++ MP+E
Sbjct: 142 MLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPME 201
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
PN GALL C+IH N E+ ++ L L+P G YI+LSNIYA+A WDD +VR
Sbjct: 202 PNPCALGALLEGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVR 261
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQ-ADGYQPN 460
L+K+ G+ K PG S +E +G++H F AGD +HP S +I + L ++ RL+ A GY +
Sbjct: 262 NLMKVNGISKVPGVSVIE-LKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSAD 320
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQ 520
+ L D+ +E+K+ L HSEKLA+A+GLL +RI+KNLR+C DCH S+
Sbjct: 321 TGNGLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISK 380
Query: 521 VIGREIVVRDNMRFHHFQDGKCSCGNYW 548
V G EI+VRD RFHHF+DG+CSC ++W
Sbjct: 381 VYGGEIIVRDRNRFHHFEDGECSCLDFW 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW------------------------ 122
+L N+M+ +VKCG + + +F EMP RDVVSW
Sbjct: 5 NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMQ 64
Query: 123 ---------TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
T L+ YA G + A +FN + KD +AW ++ G +EA + F
Sbjct: 65 AVGVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLF 124
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+ M+ AGVE + +T V ++SAC+ G++ + + S +G V +ID+ +
Sbjct: 125 KEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM-SSSYGIEPKVEHYGCVIDLLA 183
Query: 234 KCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHG 267
+ G +++A + M + N + +++ G +HG
Sbjct: 184 RAGLLEEAMELIGTMPMEPNPCALGALLEGCRIHG 218
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S VF ++ K+ W +I G + GH+K++ L+ M+ G+ P T A+ AC
Sbjct: 87 SLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSAC 146
Query: 63 TEVLDVSLGQQI 74
+ V GQ++
Sbjct: 147 SHAGMVDEGQKL 158
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 301/553 (54%), Gaps = 48/553 (8%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE++ K+ LWT++I G++ G K +++ Y M + + L + AC+ +
Sbjct: 234 FEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKAS 293
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
S G+ +HA TIL GF + ++GN + MY K
Sbjct: 294 SFGKSLHA-TILKLGFEYETFIGNALTDMYSK---------------------------- 324
Query: 129 YANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+GDM SA +F V+ TA++ GYV+ + +A+ F ++ G+E + T
Sbjct: 325 ---SGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFT 381
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+I ACA +++ + + + F + V S L+DMY KCG D + ++F
Sbjct: 382 FTSLIKACANQAKLEHGSQL--HGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDE 439
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
++ + ++++++ F+ HG AI+ F M+ KPN VTF+ +L CSH G+
Sbjct: 440 IENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG 499
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
K YGV P +HY+C++DLLGRAG L+EA + MP EPN W + LGAC+
Sbjct: 500 LNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACK 559
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IH + E A+ AA+ L +LEP+ G +++LSNIYA W+DV +R+++K + K PGY
Sbjct: 560 IHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGY 619
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW++ R H F D +HP EI + L +LLD+++ GY P SVL D+ D K++
Sbjct: 620 SWVD-IRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEK 678
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE++A+AF LLT G + + KNLR+C DCH + S+V R I+VRD RFH
Sbjct: 679 LLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFH 738
Query: 536 HFQDGKCSCGNYW 548
HF +G CSCG+YW
Sbjct: 739 HFSNGSCSCGDYW 751
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 169/362 (46%), Gaps = 47/362 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N WT++I G+ ++++S +C MR EG F LS++ +ACT +
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G Q+H ++ GF +L+VG+ + MY KCG L + K F+EMP +D V WT +I
Sbjct: 192 IQFGTQVHC-LVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMID 250
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ NGD + A +T Y+ +M V D
Sbjct: 251 GFVKNGDFKKA------------------LTAYM-------------KMVTDDVFIDQHV 279
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-V 246
L +SAC+ L + + GF +G+AL DMYSK G + A +F +
Sbjct: 280 LCSTLSACSALKASSFGKSLHATILKLGFE--YETFIGNALTDMYSKSGDMVSASNVFQI 337
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV----- 301
++ S +++I G+ + A+ F D+ + +PN TF ++ AC++
Sbjct: 338 HSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEH 397
Query: 302 GLKCYG----VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
G + +G + D + + +VD+ G+ G + ++++ +++ P+ W L+G
Sbjct: 398 GSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFS 456
Query: 356 IH 357
H
Sbjct: 457 QH 458
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 34/256 (13%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T++ L + +++ G+Q+HA ++ GG + ++ N + +Y KCG L + K+FD+
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAM-LIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDK 135
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
M +R++VSWT +I +A N++ +EA+ F
Sbjct: 136 MSQRNMVSWTSIITGFA-------------------------------HNSRFQEALSSF 164
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
+M+ G L V+ AC LG I++ V + GFG + VGS L DMYS
Sbjct: 165 CQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGC--ELFVGSNLTDMYS 222
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG + DA + F M ++ ++SMI GF +G A+ + MV + +
Sbjct: 223 KCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCS 282
Query: 294 VLTACSHVGLKCYGVS 309
L+ACS + +G S
Sbjct: 283 TLSACSALKASSFGKS 298
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 305/562 (54%), Gaps = 54/562 (9%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHL-----KDSISLYCSMRREGI-GPVSFTLSA 57
+ R +F+Q+ F + +LIR G D+ LY M G P SFTL+
Sbjct: 76 YARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAF 135
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
+ KACT + + GQQ+HAQ G YV ++ +Y +C + +R VFD M E
Sbjct: 136 VLKACTALGE---GQQLHAQA-FGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVED 191
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
K+ VAW++M+ GY + EA+ F MQ
Sbjct: 192 ------------------------------KNLVAWSSMIGGYSRMGMVNEALGLFRDMQ 221
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV D VT+V VISACA+ G + WV + G ++ + +ALIDMY+KCG
Sbjct: 222 AVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGI--TVDLELSTALIDMYAKCGL 279
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I+ A +F M +R+ ++S+MI+G AMHG A A+ LF M++ + +PN VTF+GVL+A
Sbjct: 280 IERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSA 339
Query: 298 CSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
C+H GL + G+ S ++Y CMVDLL R+G L+EA V MP+ PN +
Sbjct: 340 CAHSGLVDDGRRYWCTMQELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVI 399
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LL A + +I ++A+ LFELEP NY++LSN+YA WD V +R+ +K
Sbjct: 400 WRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKD 459
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
+ G S +E + G +H+F D +HP +I+ L ++ DR+ G++P +VL+
Sbjct: 460 NNVTVVAGCSSIEIN-GYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGHKPWTAAVLH 518
Query: 467 DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREI 526
DV +EEK+ L HSE+LA+A+GLL T +R++KNLR C DCH S+ GREI
Sbjct: 519 DVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVTKIISKSYGREI 578
Query: 527 VVRDNMRFHHFQDGKCSCGNYW 548
+VRD +RFH F G CSC ++W
Sbjct: 579 IVRDRVRFHRFIGGSCSCNDFW 600
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 301/547 (55%), Gaps = 55/547 (10%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
+PF + A+IR L +++L+ M R + FT + K+ L
Sbjct: 63 DPFPYNAVIRHVALHA-PSLALALFSHMHRTNVPFDHFTFPLILKSS------KLNPHCI 115
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
+L GF S++YV N +I +Y +G +
Sbjct: 116 HTLVLKLGFHSNIYVQNALIN-------------------------------SYGTSGSL 144
Query: 136 ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY--AGVETDYVTLVGVIS 193
++ LF+E+P +D ++W+++++ + + P EA+ F++MQ + + D V ++ VIS
Sbjct: 145 HASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDGVVMLSVIS 204
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
A + LG ++ WV S G V +GSALIDMYS+CG ID + ++F M RNV
Sbjct: 205 AVSSLGALELGIWVHAFI--SRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNV 262
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---------- 303
+++++I G A+HGR A++ F DMV++ KP+ + F+GVL ACSH GL
Sbjct: 263 VTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSS 322
Query: 304 --KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
YG+ P+ +HY CMVDLLGRAG + EA VE M V PN +W LLGAC H
Sbjct: 323 MWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLLV 382
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+A+ A + EL+P G+Y++LSN Y G W VR ++ + + K PG S + D
Sbjct: 383 LAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIVKEPGLSLVHID 442
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
+ V HEF +GD +HP EI + LG ++D ++ GY P+ ++VL+D+ +EEK+ L HS
Sbjct: 443 Q-VAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPSTKNVLHDIQEEEKEHSLGYHS 501
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
EKLA+AF LL T+R++KNLRIC DCH FM S R+IV+RD RFHHF+ G
Sbjct: 502 EKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGFFDRDIVIRDRSRFHHFRKGS 561
Query: 542 CSCGNYW 548
CSC ++W
Sbjct: 562 CSCRDFW 568
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 35/246 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM--RREGIGPVSFTLSALFKACTEV 65
+F+++ ++ W++LI + +G ++++L+ M + I P + ++ A + +
Sbjct: 150 LFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSL 209
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LG +HA I G + +G+ +I MY +CG + S KVFDEMP R+VV+W
Sbjct: 210 GALELGIWVHA-FISRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTW--- 265
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
TA++ G + + REA+E F M +G++ D
Sbjct: 266 ----------------------------TALINGLAVHGRGREALEAFYDMVESGLKPDR 297
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +GV+ AC+ G+++ V + S +G + ++D+ + G + +A+
Sbjct: 298 IAFMGVLVACSHGGLVEEGRRVFS-SMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFV 356
Query: 246 VGMKQR 251
GM+ R
Sbjct: 357 EGMRVR 362
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 316/563 (56%), Gaps = 52/563 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALI-----RGYILQGHLKDSISLYCSMRREGIGPVSFTLSA 57
++ R VF+++ + +W + RG G +++ ++ M EG+ P ++T +
Sbjct: 84 AYARQVFDRIPHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVS 143
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L KAC G+Q H + G + YV T+I MY +CG
Sbjct: 144 LLKACASARAGEEGRQAHGVAVKAGAAEHE-YVAPTLINMYAECG--------------- 187
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+ +A +F+ + + V++ AM+T V+++ P EA+ F MQ
Sbjct: 188 ----------------DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQ 231
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G++ VTL+ V+SACA LG ++ W+ + + V V +ALIDMY+KCGS
Sbjct: 232 AKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL--VKVNTALIDMYAKCGS 289
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++DA +F M+ R+ ++S M++ +A HG AI +F +M K KP+ VTF+GVL A
Sbjct: 290 LEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
Query: 298 CSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CSH G+ + YG+ HY C+ DLL R+G LE A K ++++P++P +
Sbjct: 350 CSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAIL 409
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LL AC H + ++ + + EL+ G+Y+I SN+ A+ G W++++ VR+L+
Sbjct: 410 WRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSE 469
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+ K PG S +E D ++HEF AGD +HP+S E ++ + +++++L+ GY PN V +
Sbjct: 470 KGVVKVPGCSSIEID-NMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFH 528
Query: 467 -DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ +EEK L HSEKLA++FGLL T+PG T+RI+KNLR+C DCH S V R
Sbjct: 529 VEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRR 588
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF+DG CSCG+YW
Sbjct: 589 IILRDLNRFHHFEDGVCSCGDYW 611
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 308/555 (55%), Gaps = 55/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F + +N WT ++ G K+++ MRR+G+ S+T S++ AC
Sbjct: 129 LFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTP- 187
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +HA I +G SD++V +++I Y+K
Sbjct: 188 --GVLAAMHADIIKVG-LDSDVFVRSSLIDAYMKL------------------------- 219
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
GD++S G+F+E+ D V W +++ G+ Q+ A+E F RM+ +G +
Sbjct: 220 ------GDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQG 273
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
TL V+ AC + +++ V ++++ +AL+DMY KCG + DA +F
Sbjct: 274 TLTSVLRACTGMVMLEVGRQV----HAHVLKYDRDLILHNALLDMYCKCGCLLDADALFS 329
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSHVGL-- 303
M R+V S+S+MI G A +GR+ A+++F D++K E PN +T +GVL ACSH GL
Sbjct: 330 RMHDRDVISWSTMISGLAQNGRSVEALKVF-DLMKAEGPTPNNITMVGVLFACSHAGLVE 388
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
K +G+ P +H CMVDLLGRAG L+EA+K + +M EP+ +W LLGA
Sbjct: 389 DGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGA 448
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N +A AA + +LEP+ G I+LSNIYA W + + + ++ G+KK P
Sbjct: 449 CRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEP 508
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW+E + ++H F AG+L+HP S I Q L L+ R + GY P VL D+ E+K
Sbjct: 509 GRSWIELGK-LVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQK 567
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +L HSEKLA+AFG + + G VRIMKNLRIC DCH F S+ G+ I++RD +R
Sbjct: 568 EDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVR 627
Query: 534 FHHFQDGKCSCGNYW 548
FHHFQ G CSCG+YW
Sbjct: 628 FHHFQHGVCSCGDYW 642
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 144/351 (41%), Gaps = 49/351 (13%)
Query: 2 DSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
D R + +P ++ L G +++L + G+ +L L K
Sbjct: 16 DRRSRRRLHSGSHSHPHPLVSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKL 75
Query: 62 CTEVLDVSLGQQIHAQTIL-----LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
C V G+ IH L G L+V N+++ MY K G L + ++F MP+
Sbjct: 76 CVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQ 135
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
R+VVSWT ++ A AN + +EA+ + M
Sbjct: 136 RNVVSWTTVVAALAN------------------------------APGRKKEALRFLVEM 165
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+ GV + T V+ AC GV+ + A+ G ++V V S+LID Y K G
Sbjct: 166 RRDGVAANSYTFSSVLGACGTPGVLAAMH-----ADIIKVGLDSDVFVRSSLIDAYMKLG 220
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
+D +F M ++ ++S+I GFA G A++LF M ++ N T VL
Sbjct: 221 DLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLR 280
Query: 297 ACS-----HVGLKCYGVSPSTDH----YACMVDLLGRAGCLEEALKMVEKM 338
AC+ VG + + D + ++D+ + GCL +A + +M
Sbjct: 281 ACTGMVMLEVGRQVHAHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRM 331
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 134/288 (46%), Gaps = 36/288 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + +W ++I G+ G ++ L+ M+ G TL+++ +ACT +
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGM 285
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + +G+Q+HA + + DL + N ++ MY KCG L + +F M +RDV+SW+
Sbjct: 286 VMLEVGRQVHAHVL---KYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWS-- 340
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M++G QN + EA++ F+ M+ G +
Sbjct: 341 -----------------------------TMISGLAQNGRSVEALKVFDLMKAEGPTPNN 371
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T+VGV+ AC+ G+++ W + FG + ++D+ + G +D+A +
Sbjct: 372 ITMVGVLFACSHAGLVE-DGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFI 430
Query: 246 VGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
MK + + + +++ MH A A +++K E + G +
Sbjct: 431 GEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGARIL 478
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 306/556 (55%), Gaps = 48/556 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F ++ + + LI G +++S+ L+ ++ F + L
Sbjct: 295 RKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANS 354
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L++ +G+QIH+Q I+ S++ VGN+++ MY KC G
Sbjct: 355 LNLEMGRQIHSQAIVTDAI-SEVLVGNSLVDMYAKCDKFG-------------------- 393
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A +F +L + V WTA+++GYVQ + ++ F M A + D
Sbjct: 394 -----------EANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T ++ ACA L + + SG ++NV GSAL+DMY+KCGSI +A ++F
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSG--CLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M RN S++++I +A +G A++ F M+ + +PN V+F+ +L ACSH GL
Sbjct: 501 QEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVE 560
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+ Y + P +HYA MVD+L R+G +EA K++ +MP EP+ +W ++L +
Sbjct: 561 EGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNS 620
Query: 354 CQIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
C+IH+N E+A AA+ LF ++ + Y+ +SNIYA+AG WD V +V++ L+ G++K
Sbjct: 621 CRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKV 680
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
P YSW+E + H F A D +HP + EI + L +L +++ GY+P+ L++V +E
Sbjct: 681 PAYSWVEIKQKT-HVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEV 739
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K L HSE++A+AF L++T G+ + +MKNLR C DCH + S+++ REI VRD+
Sbjct: 740 KVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSS 799
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF DG CSC +YW
Sbjct: 800 RFHHFTDGSCSCKDYW 815
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 165/357 (46%), Gaps = 46/357 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + K+ + AL+ GY +G D+I+L+ M+ G P FT +A+ A ++ D
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ GQQ+H+ ++ F +++V N ++ Y K + +RK
Sbjct: 256 IEFGQQVHS-FVVKCNFVWNVFVANALLDFYSKHDRIVEARK------------------ 296
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
LF E+P D +++ ++T N + E++E F +Q+ +
Sbjct: 297 -------------LFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFP 343
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++S A ++ + A + I+ V+VG++L+DMY+KC +A RIF
Sbjct: 344 FATLLSIAANSLNLEMGRQIHSQAIVTD--AISEVLVGNSLVDMYAKCDKFGEANRIFAD 401
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-------- 299
+ ++ ++++I G+ G ++LF +M + + + T+ +L AC+
Sbjct: 402 LAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLG 461
Query: 300 ---HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
H + G + + +VD+ + G ++EAL+M ++MPV N W AL+ A
Sbjct: 462 KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISA 517
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 144/292 (49%), Gaps = 22/292 (7%)
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+++ GF + N + +++ G LG +RK+FDEMP ++V+S +I+ Y +G++ +
Sbjct: 32 SMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLST 91
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A LF+ + + V WT ++ GY Q+ + EA F M G+ D++TL ++S +
Sbjct: 92 ARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTE 151
Query: 198 LGVIKYANWVCEIAEGSG----FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
+ E+A+ G G + ++V ++L+D Y K S+ A +F M +++
Sbjct: 152 FESVN------EVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDN 205
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTD 313
++++++ G++ G H AI LF M +P+ TF VLTA + +G +
Sbjct: 206 VTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSF 265
Query: 314 HYAC-----------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
C ++D + + EA K+ +MP E +G + L+ C
Sbjct: 266 VVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCC 316
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 34/294 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S R +F+ + ++ WT LI GY ++ +L+ M R G+ P TL+ L
Sbjct: 90 STARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGF 149
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
TE V+ Q+H + + G+ S L V N+++ Y K LG + +F M E+D V++
Sbjct: 150 TEFESVNEVAQVHGHVVKV-GYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ Y+ G FN +AI F +MQ G
Sbjct: 209 NALLTGYSKEG--------FNH-----------------------DAINLFFKMQDLGFR 237
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
T V++A Q+ I++ V F + NV V +AL+D YSK I +A
Sbjct: 238 PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNF--VWNVFVANALLDFYSKHDRIVEAR 295
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLT 296
++F M + + SY+ +I A +GR +++LF ++ T F +L+
Sbjct: 296 KLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLS 349
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 302/554 (54%), Gaps = 49/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + ++ WT ++ + +++ + +++EGI S + ++ + C +
Sbjct: 424 VFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKS 483
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+SL +Q+H I G DL + N +I +Y +CG
Sbjct: 484 ISLLKQVHCYAIRNGLL--DLILENRLIDIYGECG------------------------- 516
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ + + LF + KD V+WT+M+ N + A+ F MQ A ++ D V
Sbjct: 517 ------EFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVA 570
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
LV ++ A A L + V F PI VV S+L+DMYS CGS++ A R+F
Sbjct: 571 LVSILVAIAGLSSLTKGKQVHGFLIRRNF-PIEGPVV-SSLVDMYSGCGSMNYAIRVFER 628
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
K ++V +++MI MHG AI LF M++T P+ V+F+ +L ACSH L
Sbjct: 629 AKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEG 688
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
Y + P +HYAC+VD+LGR+G EEA + ++ MP++P VW ALLGAC+
Sbjct: 689 KHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACR 748
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
+HRN +A +AAN L ELEPD GNYI++SN++A G W++ R + GL+KNP
Sbjct: 749 VHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPAC 808
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKK 474
SW+E IH F +GD H +S I L ++ + L+ + GY + R VL+D S+EEK
Sbjct: 809 SWIEIGNN-IHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKI 867
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
+L HSE++A+AFGL++T PG +RI KNLR+C DCH F S++ R+IVVRD RF
Sbjct: 868 DMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRF 927
Query: 535 HHFQDGKCSCGNYW 548
HHF G CSC ++W
Sbjct: 928 HHFSGGSCSCEDFW 941
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 184/397 (46%), Gaps = 50/397 (12%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+DS R VF Q+ K+ W +++ Y+ ++I + M + G P + +L
Sbjct: 317 VDSALR-VFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSS 375
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + ++ G++ HA I +DL VGNT++ MY+KCG + CS KVF+ M RD +
Sbjct: 376 ALGHLSRLNNGREFHAYAIK-QRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SWT ++ +A Q+++ EA+E +Q G
Sbjct: 435 SWTTILACFA-------------------------------QSSRHSEALEMILELQKEG 463
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ D + + ++ C L I V A +G + ++++ + LID+Y +CG D
Sbjct: 464 IMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG---LLDLILENRLIDIYGECGEFDH 520
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
+ +F ++++++ S++SMI +GR + A+ LF +M K +P+ V + +L A +
Sbjct: 521 SLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAG 580
Query: 301 V-----GLKCYGVSPSTDH------YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ G + +G + + +VD+ G + A+++ E+ + + +W A
Sbjct: 581 LSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTA 639
Query: 350 LLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYIIL 384
++ A +H + + A + + L PD + +L
Sbjct: 640 MINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 178/391 (45%), Gaps = 59/391 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE---GIGPVSFTLSALFKAC 62
R +F + + F W AL+ Y+ G +++ +Y +MR G P TL+++ KAC
Sbjct: 115 RRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC 174
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE--RDVV 120
D G ++H + +G S L V N +IGMY KCG L + +VF+ + + RDV
Sbjct: 175 GAEGDGRCGGEVHGLAVKVGLDKSTL-VANALIGMYAKCGLLDSALRVFEWLQQDARDVA 233
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW ++V+G VQN + EA+ F MQ AG
Sbjct: 234 SW-------------------------------NSVVSGCVQNGRTLEALALFRGMQSAG 262
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ T V V+ CA+LG++ + G +N + +AL+ MY+K G +D
Sbjct: 263 FPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG-SELN--IQCNALLVMYAKYGRVDS 319
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
A R+F + +++ S++SM+ + + AI FG+M++ +P+ + + +A H
Sbjct: 320 ALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGH 379
Query: 301 VG-------LKCYGVSPS--TDHYA--CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGA 349
+ Y + TD ++D+ + G +E + K+ E M + + W
Sbjct: 380 LSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS-WTT 438
Query: 350 LLGAC--QIHRNPEIAQIAANHLFELEPDKI 378
+L AC Q R+ E ++ + EL+ + I
Sbjct: 439 IL-ACFAQSSRHSEALEM----ILELQKEGI 464
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 55/369 (14%)
Query: 1 MDSFPRLVFE--QVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL 58
+DS R VFE Q ++ W +++ G + G ++++L+ M+ G S+T A+
Sbjct: 215 LDSALR-VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAV 273
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
+ C E+ +SLG+++HA + KCG E+
Sbjct: 274 LQVCAELGLLSLGRELHAALL--------------------KCG---------SELN--- 301
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
+ L+V YA G ++SA +F ++ KD ++W +M++ YVQN+ EAI++F M
Sbjct: 302 -IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQ 360
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
G + D+ +V + SA L + A ++ VG+ L+DMY KCGSI
Sbjct: 361 HGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH--TDLQVGNTLMDMYIKCGSI 418
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ + ++F M R+ S+++++ FA R A+++ ++ K + + +L C
Sbjct: 419 ECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Query: 299 SHVGLKCYGVSPSTDHYAC------------MVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
GLK + YA ++D+ G G + +L + ++ VE V
Sbjct: 479 --CGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQR--VEKKDIV 534
Query: 347 -WGALLGAC 354
W +++ C
Sbjct: 535 SWTSMINCC 543
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+HA + G D GFL T+L+ Y
Sbjct: 76 GRQVHAHAVTTGSLNED------------DDGFLA-----------------TKLVFMYG 106
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA---GVETDYVT 187
G ++ A LFN +P + +W A+V Y+ + EA+ + M+ + G D T
Sbjct: 107 RCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCT 166
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC G + V +A G + +V +ALI MY+KCG +D A R+F
Sbjct: 167 LASVLKACGAEGDGRCGGEVHGLAVKVGLD--KSTLVANALIGMYAKCGLLDSALRVFEW 224
Query: 248 MKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
++Q R+V S++S++ G +GR A+ LF M N T + VL C+ +GL
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLS 284
Query: 306 YG 307
G
Sbjct: 285 LG 286
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + L+ MY +CG +DDA R+F GM R VFS+++++ + G A A++++G M +
Sbjct: 97 LATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASA 156
Query: 284 ---TKPNGVTFIGVLTACSHVGL-KC----------YGVSPSTDHYACMVDLLGRAGCLE 329
+ P+G T VL AC G +C G+ ST ++ + + G L+
Sbjct: 157 APGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLD 216
Query: 330 EALKMVEKMPVEPNG-GVWGALLGAC 354
AL++ E + + W +++ C
Sbjct: 217 SALRVFEWLQQDARDVASWNSVVSGC 242
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/567 (34%), Positives = 318/567 (56%), Gaps = 49/567 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F++V + FLW L+ GY G+ ++S+SL+ MR GI V ++ ++
Sbjct: 156 RRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRV--------ESARKL 207
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM----PERDVVS 121
D LG + D+ N+MI YV G +F++M D+ +
Sbjct: 208 FD-ELGDR-------------DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLAT 253
Query: 122 WTE--------LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
L+ Y+ +G++ SA +F + + V+WT+M+ GY + ++ F
Sbjct: 254 MVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 313
Query: 174 ERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
M+ + + +T+ ++ ACA L ++ + +GF +V +AL+DMY
Sbjct: 314 HEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV--ANALVDMYL 371
Query: 234 KCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
KCG++ A +F + ++++ S++ MI G+ MHG AI F +M + +P+ V+FI
Sbjct: 372 KCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFIS 431
Query: 294 VLTACSHVGLKCYG------------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
+L ACSH GL G + P ++HYAC+VDLL RAG L +A K ++ MP+E
Sbjct: 432 ILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIE 491
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVR 401
P+ +WGALL C+I+ + ++A+ A H+FELEP+ G Y++L+NIYA A W++V ++R
Sbjct: 492 PDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLR 551
Query: 402 RLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL 461
+ GL+KNPG SW+E +G +H F GD +HP + +I+ L R++ +G+ P +
Sbjct: 552 ERIGRRGLRKNPGCSWIE-IKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKM 610
Query: 462 RSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQV 521
R L D EK+ L HSEK+A+AFG+L+ PG TVR+ KNLR+C DCH S++
Sbjct: 611 RYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKM 670
Query: 522 IGREIVVRDNMRFHHFQDGKCSCGNYW 548
+ R+I++RD+ RFHHF+DG CSC +W
Sbjct: 671 VKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 67/376 (17%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T ++ + C ++ + G++IH+ I D +G+ ++ MYV CG L R++FD+
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHS-IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161
Query: 114 MPERDVVSWTELIVAYANNGD------------------MESAGGLFNELPLKDKVAWTA 155
+ V W L+ YA G+ +ESA LF+EL +D ++W +
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 156 MVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSG 215
M++GYV N + ++ FE+M G+ TD T+V V
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV------------------------ 257
Query: 216 FGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQL 275
+ + + L+DMYSK G+++ A ++F M +R+V S++SMI G+A G + +++L
Sbjct: 258 -----ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 312
Query: 276 FGDMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGR 324
F +M K + PN +T +L AC+ H + G S +VD+ +
Sbjct: 313 FHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 372
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE--LEPDKIGNYI 382
G L A + + +P E + W ++ +H A A N + +EPD++
Sbjct: 373 CGALGLARLLFDMIP-EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS--- 428
Query: 383 ILSNIYA--SAGMWDD 396
+S +YA +G+ D+
Sbjct: 429 FISILYACSHSGLLDE 444
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 313/584 (53%), Gaps = 73/584 (12%)
Query: 3 SFPRLVFEQVKY--KNPFLWTALIRGYILQGHL-KDSISLYCSMRRE-GIGPVSFTLSAL 58
S R VF+ V + +W A+I GY G + +++I L+ M E G P T++ +
Sbjct: 313 SHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGV 372
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
AC +V G++ ++ S+ +V N ++ MY + G
Sbjct: 373 LPACARS-EVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLG---------------- 415
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
M+ A +F + L+D V+W ++TG + EA + MQ
Sbjct: 416 ---------------RMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQL 460
Query: 179 ----AGVET----------------DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGP 218
A ET + +TL+ ++ CA L + A
Sbjct: 461 PSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALE- 519
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGD 278
+++ VGSAL+DMY+KCG + A +F + +RNV +++ +I+ + MHG A+ LF
Sbjct: 520 -SDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDR 578
Query: 279 MVKT-ETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRA 325
MV E PN VTFI L ACSH GL + YG P+ +AC+VD+LGRA
Sbjct: 579 MVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRA 638
Query: 326 GCLEEALKMVEKM-PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIIL 384
G L+EA ++ M P E W +LGAC++HRN ++ +IAA LFELEPD+ +Y++L
Sbjct: 639 GRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLL 698
Query: 385 SNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQA 444
NIY++AG+W++ + VR +++ G+ K PG SW+E D G IH F AG+ HP S ++
Sbjct: 699 CNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELD-GAIHRFMAGESAHPESAQVHAH 757
Query: 445 LGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKN 504
+ L +R++ +GY P+ VL+DV + EK +L HSEKLA+AFGLL PGAT+R+ KN
Sbjct: 758 MDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKN 817
Query: 505 LRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
LR+C DCH S+++GREIV+RD RFHHF+DG CSCG+YW
Sbjct: 818 LRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 67/372 (18%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +I + G ++++ + M G+ P T ++ AC+ + + +G+++HA +
Sbjct: 228 WNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVL 287
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE--RDVVSWTELIVAYANNGDMES 137
++ +V + ++ MY + +R+VFD +PE R + W +I YA +G M+
Sbjct: 288 KDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDE 347
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY-AGVETDYVTLVGVISACA 196
EAIE F RM+ AG T+ GV+ ACA
Sbjct: 348 ------------------------------EAIELFSRMEAEAGCAPSETTMAGVLPACA 377
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ V V +N V +AL+DMY++ G +D+A+ IF + R++ S+
Sbjct: 378 RSEVFTGKEAVHGYVVKRDMA--SNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435
Query: 257 SSMILGFAMHGRAHAAIQLFGDM------VKTET--------------KPNGVTFIGVLT 296
+++I G + G A QL +M ET PN +T + +L
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLP 495
Query: 297 ACSHVG-------LKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMVEKMPVEPNGG 345
C+ + + Y V + + + +VD+ + GCL A + +++P N
Sbjct: 496 GCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP-RRNVI 554
Query: 346 VWGALLGACQIH 357
W L+ A +H
Sbjct: 555 TWNVLIMAYGMH 566
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 125 LIVAYANNGDMESAGGLFNELP--LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
L+ AYA GD+++A LF P L+D V++ ++++ + A++ M A E
Sbjct: 91 LLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDM-LADHE 149
Query: 183 TDYVTLVGVISACAQLG---------VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYS 233
TLV V+ AC+ L +A + +G P N AL+ MY+
Sbjct: 150 VSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFN------ALLSMYA 203
Query: 234 KCGSIDDAYRIFV--GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
+ G +DDA R+F G ++ ++++MI GR A+Q+ DMV +P+GVTF
Sbjct: 204 RLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTF 263
Query: 292 IGVLTACSHVGL 303
L ACS + L
Sbjct: 264 ASALPACSRLEL 275
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 302/554 (54%), Gaps = 48/554 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ + + +I GY G + S L+ ++ +F + + L+
Sbjct: 301 LFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELN 360
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S+G+Q HAQ ++ S++ VGN ++ MY KC
Sbjct: 361 LSMGRQTHAQAVVTTA-VSEVQVGNALVDMYAKCE------------------------- 394
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E A +F L ++ V WTA+++ YVQ EA++ F+ M V D T
Sbjct: 395 ------KFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQAT 448
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ A A L + + + G +++V GS L+DMY+ CGS+ DA +F
Sbjct: 449 FASTLKASANLASVSLGKQLH--SSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKE 506
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M RN+ ++++I ++ +G A A F DM+++ P+ V+F+ VLTACSH GL
Sbjct: 507 MPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKA 566
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ Y + P HYA M+D+L R+G EA ++ +MP EP+ +W ++L +C+
Sbjct: 567 LWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCR 626
Query: 356 IHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
IH+N ++A+ AA+ LF+++ + Y+ +SNIYA AG W++ ++V++ ++ G+KK
Sbjct: 627 IHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTA 686
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
YSW+E D V H F A D THP + +I++ + L++ + +GY+P+ L +V +E K
Sbjct: 687 YSWVEIDHRV-HVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKI 745
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
L HSE+LA+AF L+ T G+ + IMKNLR C DCH + S+++GREI VRD+ RF
Sbjct: 746 ESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRF 805
Query: 535 HHFQDGKCSCGNYW 548
HHF+DG CSCG+YW
Sbjct: 806 HHFRDGSCSCGDYW 819
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 171/396 (43%), Gaps = 58/396 (14%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ K+ + +I GY G ++++ L+ MR P FT +A+ D
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSED 259
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V GQQIH I + D++V N ++ Y K ++ ++ +FD
Sbjct: 260 VIFGQQIHGLAIK-TSYVWDIFVANALLDFYSKHDYIDLAKNLFD--------------- 303
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E+P D V++ ++TGY N + ++ + F+R+Q +
Sbjct: 304 ----------------EMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFP 347
Query: 188 LVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
++S A +G +A V A ++ V VG+AL+DMY+KC +DA
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTA-------VSEVQVGNALVDMYAKCEKFEDAN 400
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS--- 299
RIF + RN ++++I + G A+++F +M + + TF L A +
Sbjct: 401 RIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLA 460
Query: 300 --------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + G+ S + +VD+ G +++A+++ ++MP + N W AL+
Sbjct: 461 SVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALI 519
Query: 352 GACQIHRNPEIAQIAANHLFE--LEPDKIGNYIILS 385
A + + E + + E L PD + +L+
Sbjct: 520 SAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLT 555
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 138/273 (50%), Gaps = 15/273 (5%)
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ GF ++ N + V+ + +R++FDEMP R+ S ++ Y + ++ A
Sbjct: 37 IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRA 96
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
LF + +++V+WT M+ GY QN +P+EA + M +GV+ D++T ++S
Sbjct: 97 RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDT 156
Query: 199 GVIKYANWVCEI-AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS 257
+K V +I + FG +++V ++L+D Y K +D A ++F M ++ S++
Sbjct: 157 TTLKE---VLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFN 213
Query: 258 SMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF---IGVLTACSHV--GLKCYGVSPST 312
MI G+ +G A++LF M + +P+G TF +G+ V G + +G++ T
Sbjct: 214 VMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKT 273
Query: 313 DHY------ACMVDLLGRAGCLEEALKMVEKMP 339
+ ++D + ++ A + ++MP
Sbjct: 274 SYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 46/358 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +FE + +N WT +I GY K++ +LY M R G+ P T + L +
Sbjct: 97 RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDT 156
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ QIH+ I GF++ L V N+++ Y K L + ++F EMP +D VS+ +
Sbjct: 157 TTLKEVLQIHSHIIRF-GFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVM 215
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I Y G E A LF ++ D + + E + + +++ ++T Y
Sbjct: 216 ITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY 275
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
V W ++ V +AL+D YSK ID A +F
Sbjct: 276 V-------------------W--------------DIFVANALLDFYSKHDYIDLAKNLF 302
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS-----H 300
M + + SY+ +I G+A +G+ + LF + T F +L+ +
Sbjct: 303 DEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLS 362
Query: 301 VGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G + + + T + +VD+ + E+A ++ + N W A++
Sbjct: 363 MGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR-NSVPWTAIIS 419
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
P N + ++ Y K ++ A +F M RN S++ MI G++ + + A L+
Sbjct: 73 PYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYT 132
Query: 278 DMVKTETKPNGVTFIGVLTACS-----------HVGLKCYGVSPSTDHYACMVDLLGRAG 326
+M ++ KP+ +TF +L+ H + +G S S + +VD +
Sbjct: 133 EMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTC 192
Query: 327 CLEEALKMVEKMPVE 341
CL+ A ++ +MP +
Sbjct: 193 CLDIASQLFSEMPTK 207
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 316/563 (56%), Gaps = 52/563 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALI-----RGYILQGHLKDSISLYCSMRREGIGPVSFTLSA 57
++ R VF+++ + +W + RG G +++ ++ M EG+ P ++T +
Sbjct: 84 AYARQVFDRIPHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVS 143
Query: 58 LFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER 117
L KAC G+Q H + G + YV T+I MY +CG
Sbjct: 144 LLKACASARAGEEGRQAHGVAVKAGAAEHE-YVAPTLINMYAECG--------------- 187
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
D+ +A +F+ + + V++ AM+T V+++ P EA+ F MQ
Sbjct: 188 ----------------DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQ 231
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
G++ VTL+ V+SACA LG ++ W+ + + V V +ALIDMY+KCGS
Sbjct: 232 AKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL--VKVNTALIDMYAKCGS 289
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
++DA +F M+ R+ ++S M++ +A HG AI +F +M K KP+ VTF+GVL A
Sbjct: 290 LEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYA 349
Query: 298 CSHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CSH G+ + YG+ HY C+ DLL R+G LE A K ++++P++P +
Sbjct: 350 CSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAIL 409
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
W LL AC H + ++ + + EL+ G+Y+I SN+ A+ G W++++ VR+L+
Sbjct: 410 WRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSE 469
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY 466
G+ K PG S +E D ++HEF AGD +HP+S E ++ + +++++L+ GY PN V +
Sbjct: 470 KGVVKVPGCSSIEID-NMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFH 528
Query: 467 -DVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
++ +EEK L HSEKLA++FGLL T+PG T+RI+KNLR+C DCH S V R
Sbjct: 529 VEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRR 588
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF+DG CSCG+YW
Sbjct: 589 IILRDLNRFHHFEDGVCSCGDYW 611
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 304/556 (54%), Gaps = 55/556 (9%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + K+ WT +I GY ++I+L+ ++ +G+ + ++ +AC+ +
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+ ++IH + +D+ + N ++ +Y + G + +R+ F+ + +D+
Sbjct: 467 NFIREIHG--YVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDI--------- 515
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
V+WT+M+T V N P EA+E F ++ ++ D + +
Sbjct: 516 ----------------------VSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAI 553
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGF---GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +SA A L +K + GF GPI S+L+DMY+ CG+++++ ++F
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI-----ASSLVDMYACCGTVENSRKMF 608
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+KQR++ ++SMI MHG + AI LF M P+ +TF+ +L ACSH GL
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMV 668
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y + P +HYACMVDLL R+ LEEA V MP++P+ +W ALLGA
Sbjct: 669 EGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGA 728
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C IH N E+ ++AA L + + + G Y ++SNI+A+ G W+DV VR +K GLKKNP
Sbjct: 729 CHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNP 788
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEE 472
G SW+E D IH F A D +HP + +I L L+ GY + V ++VS+EE
Sbjct: 789 GCSWIEVDNK-IHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEE 847
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K ++L HSE+LAL +GLL T G +RI KNLRIC+DCH F AS+V R +VVRD
Sbjct: 848 KTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDAN 907
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG++W
Sbjct: 908 RFHHFERGLCSCGDFW 923
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 38/298 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + F W AL+ ++ G ++I LY MR G+ + T ++ KAC + +
Sbjct: 101 VFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGE 160
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFD--EMPERDVVSWTEL 125
LG +IH + G+ ++V N +I MY KCG LG +R +FD M + D VSW +
Sbjct: 161 SRLGAEIHGVAVKC-GYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A+ G+ EA+ F RMQ GV ++
Sbjct: 220 ISAHVAEGNC-------------------------------LEALSLFRRMQEVGVASNT 248
Query: 186 VTLVGVISACAQLGVIKYANWVC-EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T V + +K + + + + F +V V +ALI MY+KCG ++DA R+
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFA---DVYVANALIAMYAKCGRMEDAGRV 305
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
F M R+ S+++++ G + A+ F DM + KP+ V+ + ++ A G
Sbjct: 306 FESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSG 363
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 197/435 (45%), Gaps = 69/435 (15%)
Query: 6 RLVFEQV--KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R++F+ + + ++ W ++I ++ +G+ +++SL+ M+ G+ ++T A +
Sbjct: 200 RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVE 259
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ V LG IH +L +D+YV N +I MY KC
Sbjct: 260 DPSFVKLGMGIHG-AVLKSNHFADVYVANALIAMYAKC---------------------- 296
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
G ME AG +F + +D V+W +++G VQN +A+ YF MQ +G +
Sbjct: 297 ---------GRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+++ +I+A + G + V A +G +N+ +G+ L+DMY+KC +
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLD--SNMQIGNTLVDMYAKCCCVKYMGH 405
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F M ++++ S++++I G+A + AI LF + + + VL ACS GL
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GL 463
Query: 304 KCYGVSPSTDHYA------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K Y +V++ G G ++ A + E + + W +++
Sbjct: 464 KSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIR-SKDIVSWTSMI 522
Query: 352 GACQIHRNPEIAQIAANHLF------ELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
C + P + A LF ++PD I I+S + A+A ++S +++ +
Sbjct: 523 TCCVHNGLP----VEALELFYSLKQTNIQPDSIA---IISALSATA----NLSSLKKGKE 571
Query: 406 MTGLKKNPGYSWLEG 420
+ G G+ +LEG
Sbjct: 572 IHGFLIRKGF-FLEG 585
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 80/392 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + ++ W L+ G + D+++ + M+ G P ++ L A +
Sbjct: 305 VFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGN 364
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++HA I G S++ +GNT++ MY KC + F+ M E+D++SWT +I
Sbjct: 365 LLKGKEVHAYAIR-NGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIA 423
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA QN EAI F ++Q G++ D +
Sbjct: 424 GYA-------------------------------QNEFHLEAINLFRKVQVKGMDVDPMM 452
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+ AC+ L K N++ EI + ++++ +A++++Y + G ID A R F
Sbjct: 453 IGSVLRACSGL---KSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFES 509
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----G 302
++ +++ S++SMI +G A++LF + +T +P+ + I L+A +++ G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Query: 303 LKCYG-------------VSPSTDHYAC------------------------MVDLLGRA 325
+ +G S D YAC M++ G
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629
Query: 326 GCLEEALKMVEKMP---VEPNGGVWGALLGAC 354
GC +A+ + +KM V P+ + ALL AC
Sbjct: 630 GCGNKAIALFKKMTDQNVIPDHITFLALLYAC 661
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 49/296 (16%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S L C + GQQ+HA +LL S ++ ++ MY KCG L + KVFDEM
Sbjct: 50 SLLLDLCVAAKALPQGQQLHA--LLLKSHLS-AFLATKLVLMYGKCGSLRDAVKVFDEMS 106
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
ER + SW L+ A+ ++G K EAIE ++
Sbjct: 107 ERTIFSWNALMGAFVSSG-------------------------------KYLEAIELYKD 135
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ GV D T V+ AC LG + + +A G+G V V +ALI MY KC
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEF--VFVCNALIAMYGKC 193
Query: 236 GSIDDAYRIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
G + A +F G M++ + S++S+I G A+ LF M + N TF+
Sbjct: 194 GDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVA 253
Query: 294 VLTACS-----HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKM 338
L +G+ +G ++H+A ++ + + G +E+A ++ E M
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM 309
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R FE ++ K+ WT++I + G +++ L+ S+++ I P S + + A
Sbjct: 502 YARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G++IH ++ GF + + ++++ MY CG + SRK+F + +RD++ WT
Sbjct: 562 NLSSLKKGKEIHG-FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWT 620
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I N M G +AI F++M V
Sbjct: 621 SMI----NANGMHGCGN---------------------------KAIALFKKMTDQNVIP 649
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++T + ++ AC+ G++ EI + G P + ++D+ S+ S+++AY
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHY--ACMVDLLSRSNSLEEAY 707
Query: 243 RIFVGM 248
M
Sbjct: 708 HFVRNM 713
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + L+ MY KCGS+ DA ++F M +R +FS+++++ F G+ AI+L+ DM
Sbjct: 81 LATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLG 140
Query: 284 TKPNGVTFIGVLTAC-----SHVGLKCYGVSPSTDH----YAC--MVDLLGRAGCLEEAL 332
+ TF VL AC S +G + +GV+ + + C ++ + G+ G L A
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 333 KMVEKMPVEPNGGV-WGALLGA 353
+ + + +E V W +++ A
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISA 222
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 311/556 (55%), Gaps = 48/556 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE + K+ W A+I + +D++ L+ M EG+ FTL +L +AC + D
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 478
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ L +QIHA+ G + VGN+++ MY +CG L ++K FD + E+ +
Sbjct: 479 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGL-------- 530
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ--NAKPREAIEYFERMQYAGVETDY 185
VAW+ ++ Y Q + R A ++F+ M+ G++
Sbjct: 531 -----------------------VAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGE 567
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
VT V + ACA + +++ + A SGF ++V+G+ +I+MY KCGS DA +F
Sbjct: 568 VTFVSALDACAAMATLEHGRSMHRRAAASGFVE-TSLVLGNTIINMYGKCGSPSDAKLVF 626
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
M ++ + S++S+I+ +A +G A A+ +M+ P+ T + +L SH GL
Sbjct: 627 DQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLE 686
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV-EPNGGVWGALLG 352
+ +G+ PS+ C+VDLL R G L+ A +++ P + + W LL
Sbjct: 687 RGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLA 746
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC+ + +P+ A +FELEP G++++L+N+YAS G W D SR+R++++ +KK
Sbjct: 747 ACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKE 806
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E G +HEF +G+ HP EI + L L R++ GY P+ +V++DV + +
Sbjct: 807 PGCSWIELS-GSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGD 865
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ IL HSE+LA+ FGL++T PG T+R++KNLR+C DCH S V+GREIVVRD+
Sbjct: 866 KEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSS 925
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G+CSCG++W
Sbjct: 926 RFHHFKHGQCSCGDFW 941
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 46/359 (12%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+VF+ + KN F WT ++ Y GH ++++ L+ M+ EG P AC
Sbjct: 13 MVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASG 72
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+QIH+ +++ G TS++ + N+++ MY KC + C+ KVFD M
Sbjct: 73 ELDHGRQIHS-SVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML----------- 120
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
L+D V+WTAM+ Y QN +A+E RM GV+ + V
Sbjct: 121 --------------------LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQV 160
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V ++ CA+L ++ + G P + ++G+AL+ MY CGS DD +F
Sbjct: 161 TFVTIVDVCAKLRLLDLGRKIHHRIINEGLEP--DGILGNALVHMYGSCGSFDDMKSVFS 218
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY 306
M Q +V +++MI G + +G+ + +F M K N VT++ ++ C ++
Sbjct: 219 RMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE 278
Query: 307 G--------VSP---STDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G SP ST ++ L G+ G L+ A ++E M + + W A++ AC
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 192/423 (45%), Gaps = 49/423 (11%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+ E + ++ W A++ G ++I L M EG G T ++ +AC +
Sbjct: 317 LLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEA 376
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+S G++IHA+ +L G ++ VGN++I MY KCG
Sbjct: 377 LSQGREIHARVLLCGLLQREVAVGNSVITMYGKCG------------------------- 411
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
E+A +F +P KD V+W A++ V N+K ++A+E F M+ G+ ++ T
Sbjct: 412 ------QTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFT 465
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L+ ++ AC L +K A + +G N+ VG+++++MY++CGS+ DA + F
Sbjct: 466 LLSLLEACGGLEDLKLARQI-HARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDS 524
Query: 248 MKQRNVFSYSSMILGFAMH--GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
++++ + ++S ++ +A G A + F +M KP VTF+ L AC+ +
Sbjct: 525 LEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLE 584
Query: 306 YGVSPSTDHYA------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
+G S A ++++ G+ G +A + ++MP E W +L+ A
Sbjct: 585 HGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLIVA 643
Query: 354 C--QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
H ++ + L +PD + IL + + + V R ++ GL+
Sbjct: 644 YAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEP 703
Query: 412 NPG 414
+ G
Sbjct: 704 SSG 706
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 168/400 (42%), Gaps = 48/400 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + ++ WTA++ Y G ++ M EG+ P T + C ++
Sbjct: 115 VFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRL 174
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG++IH I+ G D +GN ++ MY CG + VF M + V+
Sbjct: 175 LDLGRKIH-HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVL------- 226
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
WT M+ G QN + E + F +M GV+ + VT
Sbjct: 227 ------------------------LWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVT 262
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ ++ C L +K + S F ++ ++ ++LI +Y +CG +D A +
Sbjct: 263 YMSMVEVCRNLDAVKEGEMIDARILESPF--CSSTLLATSLISLYGQCGILDRAKGLLEH 320
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M QR+V ++++M+ A +G AI L M N VT++ VL AC+++ G
Sbjct: 321 MYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQG 380
Query: 308 VSPSTDHYAC------------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
C ++ + G+ G E A+ + E MP + + W A++ A
Sbjct: 381 REIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVS-WNAVINASV 439
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWD 395
+ + A + H ELE + + +LS + A G+ D
Sbjct: 440 GNSKFQDA-LELFHGMELEGLRSNEFTLLSLLEACGGLED 478
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 162/402 (40%), Gaps = 53/402 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF ++ + LWT +I G G ++ + ++ M EG+ T ++ + C +
Sbjct: 216 VFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDA 275
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V G+ I A+ IL F S + ++I +Y +CG L
Sbjct: 276 VKEGEMIDAR-ILESPFCSSTLLATSLISLYGQCGIL----------------------- 311
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
+ A GL + +D VAW AMVT QN EAI RM G + VT
Sbjct: 312 --------DRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVT 363
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+ ACA L + + G V VG+++I MY KCG + A +F
Sbjct: 364 YLSVLEACANLEALSQGREIHARVLLCGLLQ-REVAVGNSVITMYGKCGQTEAAMSVFEA 422
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG 307
M +++ S++++I + + A++LF M + N T + +L AC GL+
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACG--GLEDLK 480
Query: 308 VS--------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV-WGALLG 352
++ ST +V++ R G L +A K + + E G V W +L
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSL--EEKGLVAWSIILA 538
Query: 353 A-CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGM 393
A Q P E E K G +S + A A M
Sbjct: 539 AYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 52/219 (23%)
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
MY KC + DA +F G+ +NVFS++ M+ ++ +G A++LF M T+P+ V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 291 FIGVLTACSHVGL-------------------------------KCYGVSPSTDH----- 314
F+ L AC+ G KC V P +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDV-PCAEKVFDGM 119
Query: 315 -------YACMVDLLGRAGCLEEALKMVEKMPVE---PNGGVWGALLGACQIHRNPEIAQ 364
+ M+ + + GC +AL+ + +M E PN + ++ C R ++ +
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 365 IAANHLFE--LEPDKI-GNYIILSNIYASAGMWDDVSRV 400
+ + LEPD I GN ++ ++Y S G +DD+ V
Sbjct: 180 KIHHRIINEGLEPDGILGNALV--HMYGSCGSFDDMKSV 216
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S +LVF+Q+ K W +LI Y GH +++S M +G P S T ++
Sbjct: 620 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 679
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVV 120
+ + G + +I G ++ + + GFL + ++ P + D +
Sbjct: 680 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 739
Query: 121 SWTELIVAYANNGD 134
+W L+ A + GD
Sbjct: 740 AWMTLLAACKSYGD 753
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 291/536 (54%), Gaps = 55/536 (10%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W AL+ GY+ G + ++ L+ M + + +S + G + A+ +
Sbjct: 196 WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR---------GDMVEARRL 246
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAY---------- 129
D++ ++ Y + G L +R+VFD MPER+ VSW ++ AY
Sbjct: 247 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 306
Query: 130 ---------------------ANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPRE 168
A G +E A +F+ +P KD V+W AM+ Y Q E
Sbjct: 307 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366
Query: 169 AIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSAL 228
++ F M G + V+S CA + ++ + +G+G VG+AL
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV--GCFVGNAL 424
Query: 229 IDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNG 288
+ MY KCG+++DA F M++R+V S+++MI G+A HG A+++F M T TKP+
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 289 VTFIGVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVE 336
+T +GVL ACSH GL +GV+ +HY CM+DLLGRAG L EA +++
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544
Query: 337 KMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDD 396
MP EP+ +WGALLGA +IHRNPE+ + AA +FELEP+ G Y++LSNIYAS+G W D
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 604
Query: 397 VSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADG 456
++R +++ G+KK PG+SW+E V H F AGD HP +I L DL R++ G
Sbjct: 605 ARKMRVMMEERGVKKVPGFSWIEVQNKV-HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAG 663
Query: 457 YQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
Y VL+DV +EEK+ +L HSEKLA+A+G+L PG +R++KNLR+C DCH
Sbjct: 664 YVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCH 719
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 30/338 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F + ++ + A++ GY G L + SL+ ++ R P +++ + L A +
Sbjct: 60 LFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA--VS 113
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
SL A+ + D N MI + G + +R FD PE+D VSW ++
Sbjct: 114 SSLAD---ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLA 170
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY NG +E A GLFN D ++W A+++GYVQ K EA E F+RM D V+
Sbjct: 171 AYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMP----GRDVVS 226
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
++S A+ G + A + + A P+ +V +A++ Y++ G +++A R+F
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAA------PVRDVFTWTAVVSGYAQNGMLEEARRVFDA 280
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---- 303
M +RN S+++M+ + A +LF M N ++ +LT + G+
Sbjct: 281 MPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEA 336
Query: 304 -KCYGVSPSTD--HYACMVDLLGRAGCLEEALKMVEKM 338
+ P D +A M+ + GC EE L++ +M
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 87 DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELP 146
D+ N ++ YV+ G + +R++FD MP RDVVSW ++ YA GDM A LF+ P
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
++D WTA+V+GY QN EA F+ M E + V+ +++A Q ++
Sbjct: 252 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMD---- 303
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
E E P NV + ++ Y++ G +++A +F M Q++ S+++M+ ++
Sbjct: 304 --EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQG 361
Query: 267 GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-GLKC 305
G + +QLF +M + N F VL+ C+ + L+C
Sbjct: 362 GCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALEC 401
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ VF+ + K+ W A++ Y G ++++ L+ M R G + + C ++
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+H + ++ G+ +VGN ++ MY KCG + +R F+EM ERDVVSW +
Sbjct: 397 AALECGMQLHGR-LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I YA +G F +EA+E F+ M+ + D
Sbjct: 456 IAGYARHG--------FG-----------------------KEALEIFDMMRTTSTKPDD 484
Query: 186 VTLVGVISACAQLGVIK 202
+TLVGV++AC+ G+++
Sbjct: 485 ITLVGVLAACSHSGLVE 501
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 222 VVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK 281
V+ + I + + G + DA R+F M +R+ +Y++M+ G++ +GR A LF + +
Sbjct: 38 VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97
Query: 282 TETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVE 341
P Y ++ L + L +A + ++MPV
Sbjct: 98 ----------------------------PDNYSYNTLLHALAVSSSLADARGLFDEMPVR 129
Query: 342 PNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+ + ++ + H N + + A H F+L P+K
Sbjct: 130 -DSVTYNVMISS---HANHGLVSL-ARHYFDLAPEK 160
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 318/557 (57%), Gaps = 48/557 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ ++N W A + + G D+I+ + P + T A AC ++
Sbjct: 164 RNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADI 223
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + LG+Q+H I+ + D+ V N +I Y KCG D+VS +EL
Sbjct: 224 VSLELGRQLHG-FIVRSRYREDVSVFNGLIDFYGKCG---------------DIVS-SEL 266
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + +G ++ V+W +++ VQN + A F + + TD+
Sbjct: 267 VFSRIGSGR-------------RNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDF 313
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ + V+SACA+LG ++ V +A + N+ VGSAL+D+Y KCGSI+ A ++F
Sbjct: 314 M-ISSVLSACAELGGLELGRSVHALALKACVE--ENIFVGSALVDLYGKCGSIEYAEQVF 370
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE--TKPNGVTFIGVLTACSHVG- 302
M +RN+ ++++MI G+A G A+ LF +M + VT + VL+ACS G
Sbjct: 371 REMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGA 430
Query: 303 ----LKC-------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
L+ YG+ P +HYAC+VDLLGR+G ++ A + +++MP+ P VWGALL
Sbjct: 431 VERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALL 490
Query: 352 GACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKK 411
GAC++H ++ +IAA LFEL+PD GN+++ SN+ ASAG W++ + VR+ ++ G+KK
Sbjct: 491 GACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKK 550
Query: 412 NPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDE 471
N GYSW+ + +H F+A D H ++EIQ L L ++ GY P+ L+D+ +E
Sbjct: 551 NVGYSWV-AVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEE 609
Query: 472 EKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDN 531
EK + HSEK+ALAFGL+T G +RI KNLRIC DCH + S+++GREI+VRDN
Sbjct: 610 EKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDN 669
Query: 532 MRFHHFQDGKCSCGNYW 548
RFH F+DG CSC +YW
Sbjct: 670 NRFHRFKDGWCSCKDYW 686
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 49/360 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+LV + WT+LI G + ++ + +MRRE + P FT +FKA +
Sbjct: 63 QLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASL 122
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G+Q+HA L GG D++VG + MY K G +R +FDEMP R++ +W
Sbjct: 123 HMPVTGKQLHALA-LKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWN-- 179
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
AY +N VQ+ + +AI F++ E +
Sbjct: 180 --AYMSNA---------------------------VQDGRCLDAIAAFKKFLCVDGEPNA 210
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T ++ACA + ++ + S + +V V + LID Y KCG I + +F
Sbjct: 211 ITFCAFLNACADIVSLELGRQLHGFIVRSRYR--EDVSVFNGLIDFYGKCGDIVSSELVF 268
Query: 246 --VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
+G +RNV S+ S++ + A +F + E +P VL+AC+ +G
Sbjct: 269 SRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGG 327
Query: 304 KCYGVS-PSTDHYAC----------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
G S + AC +VDL G+ G +E A ++ +MP E N W A++G
Sbjct: 328 LELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP-ERNLVTWNAMIG 386
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/553 (36%), Positives = 300/553 (54%), Gaps = 49/553 (8%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + K+ WT +I GY D+++L ++ E + + ++ AC+ +
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE 469
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
L ++IH +L GG +D+ + N ++ +Y + + +R VF+ + +D+VS
Sbjct: 470 KLIKEIHGY-VLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVS------- 520
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
WT+M+T V N EA+E F + +E D +TL
Sbjct: 521 ------------------------WTSMITCCVHNGLAIEALELFNSLIETNIEPDLITL 556
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGM 248
V V+ A A L +K + GF ++ ++L+DMY++CG++++A IF +
Sbjct: 557 VSVLYAAAALSSLKKGKEIHGFLIRKGF--FLEGLIANSLVDMYARCGTMENARNIFNYV 614
Query: 249 KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC--- 305
KQR++ ++SMI MHG AI LF M P+ +TF+ +L ACSH GL
Sbjct: 615 KQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGK 674
Query: 306 ---------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
Y + P +HYAC+VDLL R+ LEEA V MP+EP+ VW ALLGAC+I
Sbjct: 675 QHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRI 734
Query: 357 HRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYS 416
H N ++ ++AA L +L + GNY+++SN +A+ G W+DV VR ++K LKK PG S
Sbjct: 735 HSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCS 794
Query: 417 WLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQAD-GYQPNLRSVLYDVSDEEKKR 475
W+E + IH F A D +HP I L L+ GY+ + V +DV +EEK +
Sbjct: 795 WIEVENK-IHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQ 853
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
+L HSE+LAL +GLL TS G +RI KNLRIC+DCH F AS++ R +VVRD RFH
Sbjct: 854 MLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFH 913
Query: 536 HFQDGKCSCGNYW 548
HF+ G CSCG++W
Sbjct: 914 HFERGLCSCGDFW 926
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 47/345 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + F W A+I + G ++I LY MR G+ +FT + KAC +
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 68 VSLGQQIHAQTIL--LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
LG +IH + GGF ++V N +I MY KCG LG +R +FD
Sbjct: 164 RRLGCEIHGVAVKCGYGGF---VFVCNALIAMYAKCGDLGGARVLFD------------- 207
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+G ME D V+W ++++ +V + EA+ F RMQ GVE++
Sbjct: 208 ------SGLMEK----------DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNT 251
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V + AC IK + + S +V V +ALI MY+ CG ++DA R+F
Sbjct: 252 YTFVSALQACEGPTFIKIGRGIHAVILKSNH--FTDVYVSNALIAMYANCGQMEDAERVF 309
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
M ++ S+++++ G + AI F DM + KP+ V+ + ++ A
Sbjct: 310 KSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLL 369
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP 339
H +G+ + ++D+ G+ C++ E MP
Sbjct: 370 AGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 199/432 (46%), Gaps = 63/432 (14%)
Query: 6 RLVFEQ--VKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
R++F+ ++ +P W ++I ++ +G +++SL+ M+ G+ ++T + +AC
Sbjct: 203 RVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACE 262
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ +G+ IHA IL +D+YV N +I MY
Sbjct: 263 GPTFIKIGRGIHA-VILKSNHFTDVYVSNALIAMY------------------------- 296
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
AN G ME A +F + KD V+W +++G VQN +AI +F+ MQ +G +
Sbjct: 297 ------ANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D V+++ +I+A + + V A G +N+ +G++LIDMY KC +
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGID--SNMHIGNSLIDMYGKCCCVKYMGS 408
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL 303
F M ++++ S++++I G+A + A+ L + + + + +L ACS GL
Sbjct: 409 AFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS--GL 466
Query: 304 KCYGVSPSTDHYA------------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
K + Y +V++ G ++ A + E + + + W +++
Sbjct: 467 KSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSK-DIVSWTSMI 525
Query: 352 GACQIHRNPEIAQIAA-NHLFE--LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
C +H I + N L E +EPD I ++S +YA+A + S +++ ++ G
Sbjct: 526 TCC-VHNGLAIEALELFNSLIETNIEPDLI---TLVSVLYAAAAL----SSLKKGKEIHG 577
Query: 409 LKKNPGYSWLEG 420
G+ +LEG
Sbjct: 578 FLIRKGF-FLEG 588
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 152/363 (41%), Gaps = 66/363 (18%)
Query: 50 PVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRK 109
P+ S + C + GQQ+HA + + +++ + MY KCG + K
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 110 VFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREA 169
VFD+M ER + + W AM+ V + EA
Sbjct: 104 VFDKMSERTIFT-------------------------------WNAMIGACVSAGRYVEA 132
Query: 170 IEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI---AEGSGFGPINNVVVGS 226
IE ++ M+ GV D T V+ AC G K CEI A G+G V V +
Sbjct: 133 IELYKEMRVLGVSLDAFTFPCVLKAC---GAFKERRLGCEIHGVAVKCGYGGF--VFVCN 187
Query: 227 ALIDMYSKCGSIDDAYRIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET 284
ALI MY+KCG + A +F M++ + S++S+I G + A+ LF M +
Sbjct: 188 ALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGV 247
Query: 285 KPNGVTFIGVLTACS-----HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALK 333
+ N TF+ L AC +G + V ++H+ ++ + G +E+A +
Sbjct: 248 ESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAER 307
Query: 334 MVEKMPVEPNGGVWGALL-GACQIHRNPEIAQIAANHLFELE-----PDKIGNYIILSNI 387
+ + M + + W LL G Q ++ A NH +++ PD++ +L+ I
Sbjct: 308 VFKSMLFK-DCVSWNTLLSGMVQ----NDMYSDAINHFQDMQDSGQKPDQVS---VLNMI 359
Query: 388 YAS 390
AS
Sbjct: 360 AAS 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R VFE + K+ WT++I + G +++ L+ S+ I P TL ++ A
Sbjct: 505 YARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAA 564
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G++IH I G F L + N+++ MY +CG + +R +F+ + +RD++ WT
Sbjct: 565 ALSSLKKGKEIHGFLIRKGFFLEGL-IANSLVDMYARCGTMENARNIFNYVKQRDLILWT 623
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I N M G ++AI+ F +M V
Sbjct: 624 SMI----NANGMHGCG---------------------------KDAIDLFSKMTDENVLP 652
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGS-GFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++T + ++ AC+ G++ EI + P + L+D+ ++ S+++AY
Sbjct: 653 DHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHY--ACLVDLLARSNSLEEAY 710
Query: 243 RIFVGM 248
M
Sbjct: 711 HFVRNM 716
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 288/518 (55%), Gaps = 46/518 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ K+ WTALI G+ +D++ L+ M R G+ P FTLS+L KA
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSE 202
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G Q+HA L G+ S +YVG+ ++ MY +CG
Sbjct: 203 HGLDPGTQLHA-FCLKYGYQSSVYVGSALVDMYARCGH---------------------- 239
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
M++A F+ +P K +V+W A+++G+ + + A+ +MQ + +
Sbjct: 240 ---------MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTH 290
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T V SACA +G ++ WV SG I +G+ L+DMY+K GSIDDA R+F
Sbjct: 291 FTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI--AFIGNTLLDMYAKAGSIDDAKRVF 348
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+ + +V S+++M+ G A HG + F M++ +PN ++F+ VLTACSH GL
Sbjct: 349 DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLD 408
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K Y V P HY VDLLGR G L+ A + + +MP+EP VWGALLGAC
Sbjct: 409 EGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ AA FEL+P G ++LSNIYASAG W DV++VR+++K +G+KK P
Sbjct: 469 RMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPA 528
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW+E + V H F A D THP EI+ ++ +++ GY P+ VL V +E++
Sbjct: 529 CSWVEIENAV-HLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQERE 587
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCH 512
L HSEKLALAF LL T G+ +RI KN+R+C DCH
Sbjct: 588 EKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCH 625
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 45/326 (13%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
++R + P S L K CT + V G+ +HA + + L + N ++ MY KCG
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 103 FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQ 162
L +R++FDEMP +D+V+WT LI G+ Q
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIA-------------------------------GFSQ 166
Query: 163 NAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNV 222
N +PR+A+ F +M G++ ++ TL ++ A + + G+ ++V
Sbjct: 167 NNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ--SSV 224
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
VGSAL+DMY++CG +D A F GM ++ S++++I G A G A+ L M +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 283 ETKPNGVTFIGVLTACSHVG-------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEA 331
+P T+ V +AC+ +G + + + A ++D+ +AG +++A
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 332 LKMVEKMPVEPNGGVWGALLGACQIH 357
++ +++ V+P+ W +L C H
Sbjct: 345 KRVFDRL-VKPDVVSWNTMLTGCAQH 369
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 300/542 (55%), Gaps = 46/542 (8%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W A+ GY G +D++ +Y M I P +F++S KAC ++ D+ +G+ IHAQ
Sbjct: 210 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQ- 268
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ D V N ++ +Y++ G +RKVFD M ER+V
Sbjct: 269 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV------------------- 309
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
V W ++++ + + E F +MQ + + TL ++ AC+++
Sbjct: 310 ------------VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 357
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + S P +V + ++L+DMY KCG ++ + R+F M +++ S++
Sbjct: 358 AALLTGKEIHAQILKSKEKP--DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 415
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG----------- 307
M+ +A++G I LF M+++ P+G+TF+ +L+ CS GL YG
Sbjct: 416 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 475
Query: 308 -VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
VSP+ +HYAC+VD+LGRAG ++EA+K++E MP +P+ +WG+LL +C++H N + +IA
Sbjct: 476 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 535
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A LF LEP GNY+++SNIYA A MWD+V ++R ++K G+KK G SW++ +
Sbjct: 536 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 595
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
G NS E ++ +L + ++ GY PN VL+DV +E K + HSE+LA
Sbjct: 596 FVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLAT 655
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
+ L+ T G +RI KNLR+C DCH +M SQV R IV+RD RFHHF DG CSC +
Sbjct: 656 TYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKD 715
Query: 547 YW 548
YW
Sbjct: 716 YW 717
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N W +LI + + + +L+ M+ E IG TL+ + AC+ V
Sbjct: 298 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 357
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IHAQ IL D+ + N+++ MY KCG + SR+VFD M +D+ SW +
Sbjct: 358 AALLTGKEIHAQ-ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIM 416
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA NG++E E I FE M +GV D
Sbjct: 417 LNCYAINGNIE-------------------------------EVINLFEWMIESGVAPDG 445
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V ++S C+ G+ +Y + E + + F + + L+D+ + G I +A ++
Sbjct: 446 ITFVALLSGCSDTGLTEYGLSLFERMK-TEFRVSPALEHYACLVDILGRAGKIKEAVKVI 504
Query: 246 VGMKQRNVFS-YSSMILGFAMHGRAH----AAIQLF 276
M + S + S++ +HG AA +LF
Sbjct: 505 ETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 540
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/475 (39%), Positives = 280/475 (58%), Gaps = 18/475 (3%)
Query: 90 VGNTMIGMYVKCGFLGCSRKVFDE--MPERDVVSWTELIVAYANNGDMESAGGLFNELPL 147
V N ++ +Y G L +R+VFD DVVSW ++ Y GD+E+A +F +P
Sbjct: 118 VTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMPE 177
Query: 148 KDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWV 207
+ V+W+AM+ V+ + EA+ F++M G + D V LV V+ CA LG ++ WV
Sbjct: 178 RGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWV 237
Query: 208 CEI--AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAM 265
AE G P NV++ +AL+DMY KCG +++A+ +F G++ +V +++MI G AM
Sbjct: 238 HRFLKAERLGGRP-GNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAM 296
Query: 266 HGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-----------LKCYGVSPSTDH 314
+G A++LF M+ PN TF+ L AC H G ++ +G+ P +H
Sbjct: 297 NGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRDHGIEPRREH 356
Query: 315 YACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELE 374
Y C+ DLLGRAG LEEA ++ MP+EP+ WGAL+ +C +H N + + L ELE
Sbjct: 357 YGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELE 416
Query: 375 PDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLT 434
PD G Y+ L N+YA G+W+D +R++++ G KK G S++E + G++HEFR+GD
Sbjct: 417 PDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWN-GLVHEFRSGDTR 475
Query: 435 HPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK-RILMTHSEKLALAFGLLTT 493
HP + I L D+ RLQ GY + VL D+ +EE K L HSE+LALAFG+L
Sbjct: 476 HPQTRLIYALLEDMEQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNI 535
Query: 494 SPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
+RI+KNLR+C DCH+ S++ REI+VRD RFH F+DG CSC ++W
Sbjct: 536 PHDMPIRIVKNLRVCRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 24/268 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ V+ + LW A+I G + GH K ++ L+ M +G P T AC
Sbjct: 275 VFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGR 334
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTELI 126
V G+ + +++ G + + + G L + V +MP E W L+
Sbjct: 335 VDEGEDVF-RSMRDHGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALM 393
Query: 127 ---VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+ + N G E G EL D + A+ Y N +A + M+ G +
Sbjct: 394 SSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKK 453
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK---CGSIDD 240
+ L I++ V E G P ++ + L DM + G + D
Sbjct: 454 E-----------TGLSFIEWNGLVHEFRSGDTRHPQTRLIY-ALLEDMEQRLQLIGYVKD 501
Query: 241 AYRIFVGMKQR----NVFSYSSMILGFA 264
++ + M N SY S L A
Sbjct: 502 TSQVLLDMDNEEDKGNTLSYHSERLALA 529
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 322/561 (57%), Gaps = 51/561 (9%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMR-REGIGPV-SFTLSALFK 60
S+ +F + Y + W A+IRG L +++ Y +M G+ + + T S K
Sbjct: 52 SYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALK 111
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
AC L S Q+H+Q +L GF +D V+
Sbjct: 112 ACARALARSEAIQLHSQ-LLRFGFNAD-------------------------------VL 139
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
T L+ AYA GD++ A LF+E+P D +W A++ G+ Q ++P +AI F+RM+ G
Sbjct: 140 LQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDG 199
Query: 181 -VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
+ + VT+ G + AC+QLG +K V + +NV V + +IDMY+KCGS+D
Sbjct: 200 NLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLD--SNVQVCNVVIDMYAKCGSMD 257
Query: 240 DAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
AY +F M+ +++ ++++MI+ FAMHG H A+ LF + ++ P+ V+++ VL AC
Sbjct: 258 KAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCAC 317
Query: 299 SHVGL-----KCY------GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+H GL K + G+ P+ HY MVDLLGRAG L+EA +V +P PN +W
Sbjct: 318 NHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLW 376
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LLGAC+ + + E+A++A+ L E+ G +++LSN+YA+ WDDV RVR ++
Sbjct: 377 QTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRR 436
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+KK PG+S++E +G +++F GD +H + EI L ++ R++A GY + +VL+D
Sbjct: 437 DVKKTPGFSYIE-IKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHD 495
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
+ DE+K+ L HSEKLA+AFGL T G ++++KNLRIC DCH+ + S++ REI+
Sbjct: 496 IGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREII 555
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFH F++G CSC +YW
Sbjct: 556 VRDRTRFHRFKEGLCSCKDYW 576
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 27/307 (8%)
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--VET 183
+ A ++ GD+ A +F +P W A++ G ++ P A+ ++ M +
Sbjct: 42 LCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRI 101
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D +T + ACA+ + + + ++ FG +V++ + L+D Y+K G +D A +
Sbjct: 102 DALTCSFALKACAR--ALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQK 159
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM-VKTETKPNGVTFIGVLTACSHVG 302
+F M Q ++ S++++I GFA R AI F M V +PN VT G L ACS +G
Sbjct: 160 LFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLG 219
Query: 303 -------LKCYGVSPSTDHYA----CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ Y V D ++D+ + G +++A + E M + + W ++
Sbjct: 220 ALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMI 279
Query: 352 GACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWDDVSRVRRLLK 405
A +H + A LFE + PD + +Y+ + AG+ +D ++ +
Sbjct: 280 MAFAMHGDGH----KALDLFEKLGRSGMSPDAV-SYLAVLCACNHAGLVEDGLKLFNSMT 334
Query: 406 MTGLKKN 412
GL+ N
Sbjct: 335 QRGLEPN 341
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 304/556 (54%), Gaps = 55/556 (9%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
FE + K+ WT +I GY ++I+L+ ++ +G+ + ++ +AC+ +
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+ ++IH + +D+ + N ++ +Y + G +R+ F+ + +D+V
Sbjct: 467 NFIREIHG--YVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIV-------- 516
Query: 129 YANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTL 188
+WT+M+T V N P EA+E F ++ ++ D + +
Sbjct: 517 -----------------------SWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAI 553
Query: 189 VGVISACAQLGVIKYANWVCEIAEGSGF---GPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ +SA A L +K + GF GPI S+L+DMY+ CG+++++ ++F
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI-----ASSLVDMYACCGTVENSRKMF 608
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
+KQR++ ++SMI MHG + AI LF M P+ +TF+ +L ACSH GL
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMV 668
Query: 306 ------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y + P +HYACMVDLL R+ LEEA + V MP++P+ VW ALLGA
Sbjct: 669 EGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGA 728
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C IH N E+ ++AA L + + G Y ++SNI+A+ G W+DV VR +K GLKKNP
Sbjct: 729 CHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNP 788
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRL-QADGYQPNLRSVLYDVSDEE 472
G SW+E D IH F A D +HP + +I L L + GY + V ++VS+EE
Sbjct: 789 GCSWIEVDNK-IHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEE 847
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K ++L HSE+LAL +GLL T G ++RI KNLRIC+DCH F AS+V R +VVRD
Sbjct: 848 KTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDAN 907
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+ G CSCG++W
Sbjct: 908 RFHHFERGLCSCGDFW 923
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 32/295 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ + F W A++ ++ G ++I LY MR G+ + T ++ KAC + +
Sbjct: 101 VFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGE 160
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
LG +IH + G F ++V N +I MY KCG LG +R +FD
Sbjct: 161 SRLGAEIHGVAVKCG-FGEFVFVCNALIAMYGKCGDLGGARVLFD--------------- 204
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
G+ E +D V+W ++++ +V K EA+ F RMQ GV ++ T
Sbjct: 205 ------------GIMMEK--EDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYT 250
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
V + +K + A S +V V +ALI MY+KCG ++DA R+F
Sbjct: 251 FVAALQGVEDPSFVKLGMGIHGAALKSNH--FADVYVANALIAMYAKCGRMEDAERVFAS 308
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
M R+ S+++++ G + A+ F DM + KP+ V+ + ++ A G
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSG 363
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 170/392 (43%), Gaps = 80/392 (20%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + ++ W L+ G + +D+++ + M+ P ++ L A +
Sbjct: 305 VFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGN 364
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G+++HA I G S++ +GNT+I MY KC + F+ M E+D++SWT +I
Sbjct: 365 LLNGKEVHAYAIR-NGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIA 423
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA QN EAI F ++Q G++ D +
Sbjct: 424 GYA-------------------------------QNECHLEAINLFRKVQVKGMDVDPMM 452
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
+ V+ AC+ L K N++ EI + ++++ +A++++Y + G D A R F
Sbjct: 453 IGSVLRACSGL---KSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFES 509
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV-----G 302
++ +++ S++SMI +G A++LF + +T +P+ + I L+A +++ G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Query: 303 LKCYG-------------VSPSTDHYAC------------------------MVDLLGRA 325
+ +G S D YAC M++ G
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629
Query: 326 GCLEEALKMVEKMPVE---PNGGVWGALLGAC 354
GC EA+ + +KM E P+ + ALL AC
Sbjct: 630 GCGNEAIALFKKMTDENVIPDHITFLALLYAC 661
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S L C V + GQQ+HA+ LL S ++ ++ MY KCG L + KV
Sbjct: 50 SLLLDLCVAVKALPQGQQLHAR--LLKSHLS-AFLATKLLHMYEKCGSLKDAVKV----- 101
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
F+E+ + W AM+ +V + K EAIE ++
Sbjct: 102 --------------------------FDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKE 135
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ GV D T V+ AC LG + + +A GFG V V +ALI MY KC
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEF--VFVCNALIAMYGKC 193
Query: 236 GSIDDAYRIFVG--MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIG 293
G + A +F G M++ + S++S+I G+ A+ LF M + N TF+
Sbjct: 194 GDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVA 253
Query: 294 VLTACS-----HVGLKCYGVSPSTDHYA------CMVDLLGRAGCLEEALKMVEKM 338
L +G+ +G + ++H+A ++ + + G +E+A ++ M
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM 309
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 4 FPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACT 63
+ R FE ++ K+ WT++I + G +++ L+ S+++ I P S + + A
Sbjct: 502 YARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G++IH ++ GF + + ++++ MY CG + SRK+F + +RD++ WT
Sbjct: 562 NLSSLKKGKEIHG-FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWT 620
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I N M G EAI F++M V
Sbjct: 621 SMI----NANGMHGCGN---------------------------EAIALFKKMTDENVIP 649
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D++T + ++ AC+ G++ EI + G P + ++D+ S+ S+++AY
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHY--ACMVDLLSRSNSLEEAY 707
Query: 243 RIFVGMKQRNVFSYSSMILGFA-MHGRAHAAIQLFGDMVKTETKPNG 288
+ M + +LG +H ++++++TK +G
Sbjct: 708 QFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSG 754
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 224 VGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ + L+ MY KCGS+ DA ++F M +R +F++++M+ F G+ AI+L+ +M
Sbjct: 81 LATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLG 140
Query: 284 TKPNGVTFIGVLTAC-----SHVGLKCYGVSPSTDH----YAC--MVDLLGRAGCLEEAL 332
+ TF VL AC S +G + +GV+ + C ++ + G+ G L A
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 333 KMVEKMPVEPNGGV-WGALLGA 353
+ + + +E V W +++ A
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISA 222
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/499 (39%), Positives = 291/499 (58%), Gaps = 24/499 (4%)
Query: 16 NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIH 75
N W +I G+ G +++ ++ M G P T+S++ A ++ D+ +G IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273
Query: 76 AQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDM 135
++ G SD V + +I MY KC +VFD+M DV S I + NG +
Sbjct: 274 G-YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 136 ESAGGLFNELPLKDK------VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLV 189
ES+ LF +L KD+ V+WT+M+ QN + EA+E F MQ AGV+ + VT+
Sbjct: 333 ESSLRLFRQL--KDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIP 390
Query: 190 GVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMK 249
++ AC + + + + G +V VGSALIDMY+KCG I + F G+
Sbjct: 391 CLLPACGNIAALMHGKAAHCFSLRRGIS--TDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 250 QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------ 303
+N+ ++++I G+AMHG+A A+++F M ++ KP+ ++F VL+ACS GL
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 304 ------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
YG+ +HYACMV LL RAG LE+A M+ +MPV P+ VWGALL +C++H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 358 RNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSW 417
N + ++AA LFELEP GNYI+LSNIYAS GMW++V+RVR ++K GL+KNPG SW
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSW 628
Query: 418 LEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRIL 477
+E + +H AGD +HP T+I + L L ++ GY P + VL DV +++K++IL
Sbjct: 629 IEV-KNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQIL 687
Query: 478 MTHSEKLALAFGLLTTSPG 496
HSEKLA+ FGLL T PG
Sbjct: 688 CGHSEKLAVVFGLLNTPPG 706
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 199/440 (45%), Gaps = 74/440 (16%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
LV + V N F ++ LI + ++S + M G+ P + L + KAC +
Sbjct: 69 LVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS 128
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
+ +Q+H + GF SD +V ++++ MY+KC + + +VFD M E DVVSW+ L+
Sbjct: 129 ALKPARQVHG-IASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187
Query: 127 VAYANNGDMESAGGLFNEL----PLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
AYA G ++ A LF+E+ + ++W M+ G+ + EA+ F M G E
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247
Query: 183 TDYVTLVGVISACAQL-----GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-- 235
D T+ V+ A L G++ + + + G +++ V SALIDMY KC
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQ-------GLVSDKCVSSALIDMYGKCSC 300
Query: 236 -----------------------------GSIDDAYRIFVGMKQR----NVFSYSSMILG 262
G ++ + R+F +K + NV S++SMI
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIAC 360
Query: 263 FAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVSP---------STD 313
+ +GR A++LF +M KPN VT +L AC ++ +G + STD
Sbjct: 361 CSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTD 420
Query: 314 HY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLF 371
Y + ++D+ + G ++ + + +P + N W A++ +H + A +F
Sbjct: 421 VYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAK----EAMEIF 475
Query: 372 EL------EPDKIGNYIILS 385
+L +PD I +LS
Sbjct: 476 DLMQRSGQKPDIISFTCVLS 495
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
T+L+ YANN A + + +P + +++ ++ + + + A+ F +M G+
Sbjct: 52 TKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLM 111
Query: 183 TDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
D L + ACA L +K A V IA SGF ++ V S+L+ MY KC I DA+
Sbjct: 112 PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD--SDSFVQSSLVHMYIKCNQIRDAH 169
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
R+F M + +V S+S+++ +A G A +LF +M + +PN +++ G++ +H G
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Query: 303 L 303
L
Sbjct: 230 L 230
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 45/181 (24%)
Query: 217 GPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLF 276
G N+ + + L+ Y+ DA + + + NVFS+S++I F+ + H A+ F
Sbjct: 43 GLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTF 102
Query: 277 GDMVKTETKPNGVTFIGVLTACS-------------------------------HVGLKC 305
M+ P+ + AC+ H+ +KC
Sbjct: 103 SQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKC 162
Query: 306 YGV-----------SPSTDHYACMVDLLGRAGCLEEALKMVEKM---PVEPNGGVWGALL 351
+ P ++ +V R GC++EA ++ +M V+PN W ++
Sbjct: 163 NQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMI 222
Query: 352 G 352
Sbjct: 223 A 223
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R+ F+ + KN W A+I GY + G K+++ ++ M+R G P + + + AC++
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 311/563 (55%), Gaps = 59/563 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKD-SISLYCSMRREG-IGPVSFTLSALFKACTEV 65
VF Q+ N F+W LI K+ +I ++ M EG + P T L KAC V
Sbjct: 80 VFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYV 139
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+S G+Q HAQ LG D+YVGN++I +Y CG L + KV
Sbjct: 140 FALSEGRQAHAQIFKLG-LDLDVYVGNSLIHLYASCGCLSMALKV--------------- 183
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
F ++PL+ V+W M+ YVQ+ A++ F MQ + E D
Sbjct: 184 ----------------FEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQNS-FEPDG 226
Query: 186 VTLVGVISACAQLGVIKYANW----VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
T+ ++SACA +G + W V A G+ G +V++ S+L+DMYSKCGS+ A
Sbjct: 227 YTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAG---DVLINSSLVDMYSKCGSLRMA 283
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET-KPNGVTFIGVLTACSH 300
++F M + ++ S++SMIL AMHGR AA+Q F +V+ E PN VTF+GVL+AC+H
Sbjct: 284 QQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNH 343
Query: 301 VGLKC------------YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ Y + P +HY C+VDLL R+G ++EAL++V M ++P+ +W
Sbjct: 344 GGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWR 403
Query: 349 ALLGAC-QIHRNPEIAQIAANHLFELEPD-KIGNYIILSNIYASAGMWDDVSRVRRLLKM 406
+LL AC + + E+++ A + + E G Y++LS +YASA W+DV +R+++
Sbjct: 404 SLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTD 463
Query: 407 TGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNL-RSVL 465
G+ K PG S +E D G+ HEF AGD +HP EI + + ++L+ GY P+ ++ +
Sbjct: 464 MGVTKEPGCSSIEID-GISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPDCSQATM 522
Query: 466 YDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGRE 525
D D K++ L HSE+LA+AFGLL PG VRI KNLR+C DCH S++ E
Sbjct: 523 VDEPDNIKQQSLKLHSERLAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIFNVE 582
Query: 526 IVVRDNMRFHHFQDGKCSCGNYW 548
I++RD RFHHF+ G CSC ++W
Sbjct: 583 IIMRDRNRFHHFKHGMCSCMDFW 605
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 305/543 (56%), Gaps = 45/543 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W ++ Y+ KD+I LY M+ + T +L AC+ DV LG+ +H Q I
Sbjct: 318 WNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQ-I 373
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ ++ VGN ++ MY KCG +R VFD+M +R ++SWT +I AY + A
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
LF ++ +K G Q KP D + V +++ACA +
Sbjct: 434 HLFQQMLELEK-------NGSSQRVKP-----------------DALAFVTILNACADVS 469
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSS 258
++ V E A G ++ VG+A++++Y KCG I++ RIF G+ R +V +++
Sbjct: 470 ALEQGKMVSEQAASCGLS--SDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNA 527
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----KCYGVSPSTD- 313
MI +A G++H A++LF M +P+ +F+ +L ACSH GL K Y S +T+
Sbjct: 528 MIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY 587
Query: 314 --------HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
H+ C+ DLLGR G L+EA + +EK+PV+P+ W +LL AC+ HR+ + A+
Sbjct: 588 RNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 647
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
AN L LEP Y+ LSNIYA W V++VR+ + G+KK G S +E + +
Sbjct: 648 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGK-YM 706
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H+F GD HP + EI++ L L +++ GY P+ + VL+ V ++EK+R+L +HSE+LA
Sbjct: 707 HDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLA 766
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+A GL++T G +R+ KNLR+C DCH S++ GR+IVVRD RFH F+DGKCSC
Sbjct: 767 IALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQ 826
Query: 546 NYW 548
+YW
Sbjct: 827 DYW 829
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 64/374 (17%)
Query: 3 SFPRLVFEQV-KYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKA 61
S + VF ++ + +N W+ + + L G++ +++ + M GI + + A
Sbjct: 197 SHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSA 256
Query: 62 CTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
C+ V G+ IH+ I L GF S+L V N ++ MY +CG + +RKVFD M E
Sbjct: 257 CSSPALVQDGRLIHS-CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE----- 310
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+D V+W M++ YV N + ++AI+ ++RMQ +
Sbjct: 311 ------------------------ALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---L 343
Query: 182 ETDYVTLVGVISACAQ-----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
D VT V ++SAC+ LG + + V + E NV+VG+AL+ MY+KCG
Sbjct: 344 RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE-------KNVIVGNALVSMYAKCG 396
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-------TKPNGV 289
S +A +F M+QR++ S++++I + A LF M++ E KP+ +
Sbjct: 397 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 456
Query: 290 TFIGVLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCLEEALKMVEKM 338
F+ +L AC+ V G S +C +V+L G+ G +EE ++ + +
Sbjct: 457 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGV 516
Query: 339 PVEPNGGVWGALLG 352
P+ +W A++
Sbjct: 517 CSRPDVQLWNAMIA 530
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 150/297 (50%), Gaps = 40/297 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+ F+ ++ +N + WT L+ + + G K+++ MR++G+ P + T +C +
Sbjct: 99 KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 158
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTE 124
+ G +IH Q ++ D V N ++ MY KCG L +++VF +M R+V+SW+
Sbjct: 159 ESLRDGIRIH-QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 217
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+ A+A +G++ W EA+ +F M G++
Sbjct: 218 MAGAHALHGNV-----------------W--------------EALRHFRFMLLLGIKAT 246
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+V ++SAC+ +++ + SGF + ++V +A++ MY +CG++++A ++
Sbjct: 247 KSAMVTILSACSSPALVQDGRLIHSCIALSGFE--SELLVANAVMTMYGRCGAVEEARKV 304
Query: 245 FVGMKQ--RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
F M + R+V S++ M+ + + R AIQL+ M + + + VT++ +L+ACS
Sbjct: 305 FDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACS 358
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 48/370 (12%)
Query: 35 DSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTM 94
D S + ++ + + T + L + C + G++IH+ + +L +GN +
Sbjct: 26 DIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHI 85
Query: 95 IGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWT 154
+ MY C G ++ FD + +R++ S WT
Sbjct: 86 VSMYAHCDSPGDAKAAFDALEQRNLYS-------------------------------WT 114
Query: 155 AMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGS 214
+V + + + +E + ERM+ GV D VT + + +C ++ + ++ S
Sbjct: 115 GLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDS 174
Query: 215 GFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAI 273
+ V +AL++MY KCGS+ A R+F M++ RNV S+S M A+HG A+
Sbjct: 175 RLEI--DPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEAL 232
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVGL--------KCYGVSPSTDHY---ACMVDLL 322
+ F M+ K + +L+ACS L C +S ++ +
Sbjct: 233 RHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMY 292
Query: 323 GRAGCLEEALKMVEKMPVEPNGGV-WGALLGACQIHRNPEIAQIAANHLFELEPDKIGNY 381
GR G +EEA K+ + M V W +L A +H + I +L DK+ Y
Sbjct: 293 GRCGAVEEARKVFDAMDEALRDVVSWNIMLSA-YVHNDRGKDAIQLYQRMQLRADKV-TY 350
Query: 382 IILSNIYASA 391
+ L + +SA
Sbjct: 351 VSLLSACSSA 360
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-------RREGIGPVSFTLSAL 58
R VF++++ ++ WT +I Y+ + + ++ L+ M + + P + +
Sbjct: 402 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 461
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER- 117
AC +V + G+ + Q G +SD VG ++ +Y KCG + R++FD + R
Sbjct: 462 LNACADVSALEQGKMVSEQAASC-GLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRP 520
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DV W +I YA G + EA++ F RM+
Sbjct: 521 DVQLWNAMIAVYAQFG-------------------------------QSHEALKLFWRME 549
Query: 178 YAGVETDYVTLVGVISACAQLGV 200
GV D + V ++ AC+ G+
Sbjct: 550 MEGVRPDSFSFVSILLACSHTGL 572
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 24/254 (9%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV-LDVSLGQQIHAQ 77
LW A+I Y G +++ L+ M EG+ P SF+ ++ AC+ L+ +
Sbjct: 524 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSM 583
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTELIVAYANNGDME 136
T T + + + + G L + + +++P + D V+WT L+ A N+ D++
Sbjct: 584 TTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLK 643
Query: 137 SAGGLFNE-LPLKDKVA--WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
A + N+ L L+ + A + A+ Y + K + + M GV+ + GV
Sbjct: 644 RAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKER----GV-- 697
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSK---CGSIDDAYRI--FVG- 247
I+ ++ + A G P N + L ++S+ CG + D + FV
Sbjct: 698 -----STIEIGKYMHDFATGDDAHP-RNREIREELAKLHSQMKECGYVPDTKMVLHFVDE 751
Query: 248 -MKQRNVFSYSSMI 260
K+R +FS+S +
Sbjct: 752 QEKERLLFSHSERL 765
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 321/594 (54%), Gaps = 58/594 (9%)
Query: 10 EQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
E + P L W ++ G G ++++++ M +GI P + T+S+L K+
Sbjct: 277 ETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGS 336
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G ++H L G + D Y G ++ MY KCG L +++VFD + R++ +W L+
Sbjct: 337 LGHGTEVHC-FFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVA 395
Query: 128 AYANNGDMESA----------------------------GGLFNELPL-----------K 148
+AN G + A GL ++ L
Sbjct: 396 GHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAP 455
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ V+WT++++G +++ +F MQ G++ VT++ ++ ACA L ++ +
Sbjct: 456 NVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELH 515
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
A + VVV +ALIDMY+K GS+ A R+F ++ +N+ ++M+ G A+HG+
Sbjct: 516 CFALRRAYD--GEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQ 573
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYA 316
AH A LF DM ++ KP+G+TF +LTAC +GL YGV+P+ +H+A
Sbjct: 574 AHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHA 633
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLL R G L+EA+ +E+ P EP WGALL C IH N ++A+ AA HLF+LEP
Sbjct: 634 CMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPH 693
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV-IHEFRAGDLTH 435
NY+ + ++Y M+D+ ++ +K G+ PG+SW + R + + E G H
Sbjct: 694 NSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPH 753
Query: 436 PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSP 495
P + EI + L+ +++ GY P+ + YDV +EEK+ +L+ H+EKLA+ +GL+ +
Sbjct: 754 PETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDK 813
Query: 496 G-ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
A VR++KN R+C DCH + S + GR+I++RD RFHHF DGKCSC +YW
Sbjct: 814 SRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 867
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 173/417 (41%), Gaps = 38/417 (9%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+K+ LW + G +I+ + MR G+ + + AC G+
Sbjct: 141 WKDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRA 200
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+HA + +G + V + GMY + + + V VV+W +I G
Sbjct: 201 VHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLG 260
Query: 134 DMESAGGLFNELPLKDKVA---------WTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ A L + + + W +++G ++ + REA+ RM G+ D
Sbjct: 261 LVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPD 320
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ ++ + A G + + V G P + G+AL+DMY+KCG +D A R+
Sbjct: 321 AATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSP--DAYTGTALVDMYAKCGRLDIAQRV 378
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F G++ RN+ +++S++ G A G A++L M + PN T+ G++T + GL
Sbjct: 379 FDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLS 438
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGAL 350
K GV+P+ + ++ G +++ +M ++P+ L
Sbjct: 439 SQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVL 498
Query: 351 LGACQ----IHRNPEIAQIAANHLFELEPDKIGNYII---LSNIYASAGMWDDVSRV 400
L AC + + E+ H F L G ++ L ++YA AG RV
Sbjct: 499 LRACAGLALLTKGKEL------HCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRV 549
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 131/302 (43%), Gaps = 41/302 (13%)
Query: 1 MDSFPRLVFEQVKYK----NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS 56
+ S L+ Q+K N WT+LI G G +DS + + M+++GI P T+
Sbjct: 437 LSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTML 496
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
L +AC + ++ G+++H L + ++ V +I MY K G L +++VF +
Sbjct: 497 VLLRACAGLALLTKGKELHC-FALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQG 555
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+++V ++ A +G A LF++ M
Sbjct: 556 KNLVCCNAMLTGLAVHGQAHEAAALFHD-------------------------------M 584
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+G++ D +T +++AC +G++ A ++ ++ G P + ++D+ ++
Sbjct: 585 WRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAE--HHACMVDLLARR 642
Query: 236 GSIDDAYR-IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D+A I + S+ +++ G A+HG A + K E N ++ +
Sbjct: 643 GYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPH-NSANYLAM 701
Query: 295 LT 296
++
Sbjct: 702 MS 703
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 300/542 (55%), Gaps = 46/542 (8%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W A+ GY G +D++ +Y M I P +F++S KAC ++ D+ +G+ IHAQ
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQ- 261
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
I+ D V N ++ +Y++ G +RKVFD M ER+VV
Sbjct: 262 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV------------------ 303
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
W ++++ + + E F +MQ + + TL ++ AC+++
Sbjct: 304 -------------TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + S P +V + ++L+DMY KCG ++ + R+F M +++ S++
Sbjct: 351 AALLTGKEIHAQILKSKEKP--DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCYG----------- 307
M+ +A++G I LF M+++ P+G+TF+ +L+ CS GL YG
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 308 -VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
VSP+ +HYAC+VD+LGRAG ++EA+K++E MP +P+ +WG+LL +C++H N + +IA
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A LF LEP GNY+++SNIYA A MWD+V ++R ++K G+KK G SW++ +
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
G NS E ++ +L + ++ GY PN VL+DV +E K + HSE+LA
Sbjct: 589 FVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLAT 648
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGN 546
+ L+ T G +RI KNLR+C DCH +M SQV R IV+RD RFHHF DG CSC +
Sbjct: 649 TYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKD 708
Query: 547 YW 548
YW
Sbjct: 709 YW 710
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + +N W +LI + + + +L+ M+ E IG TL+ + AC+ V
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IHAQ IL D+ + N+++ MY KCG + SR+VFD M +D+ SW +
Sbjct: 351 AALLTGKEIHAQ-ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIM 409
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ YA NG++E E I FE M +GV D
Sbjct: 410 LNCYAINGNIE-------------------------------EVINLFEWMIESGVAPDG 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+T V ++S C+ G+ +Y + E + + F + + L+D+ + G I +A ++
Sbjct: 439 ITFVALLSGCSDTGLTEYGLSLFERMK-TEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 246 VGMKQRNVFS-YSSMILGFAMHGRAH----AAIQLF 276
M + S + S++ +HG AA +LF
Sbjct: 498 ETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 303/548 (55%), Gaps = 54/548 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W +++ Y+ ++ LY M G+ FTL+++ A T V D+ G Q HA+ +
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAK-L 266
Query: 80 LLGGFTSDLYVGNTMIGMYVKCG--FLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+ G+ + +VG+ +I +Y KCG L C RKVFDE+ D+V
Sbjct: 267 IKSGYHQNSHVGSGLIDLYSKCGGCMLDC-RKVFDEISNPDLV----------------- 308
Query: 138 AGGLFNELPLKDKVAWTAMVTGY-VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
W M++GY + EA+E F ++Q G D +LV VISAC+
Sbjct: 309 --------------LWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACS 354
Query: 197 QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ V +A P N + V +ALI MYSKCG++ DA +F M + N SY
Sbjct: 355 NMSSPSQGRQVHGLALKLDI-PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSY 413
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------K 304
+SMI G+A HG ++ LF M++ + P +TFI VL AC+H G +
Sbjct: 414 NSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQ 473
Query: 305 CYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQ 364
+G+ P H++CM+DLLGRAG L EA +++E +P +P W ALLGAC+IH N E+A
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAI 533
Query: 365 IAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV 424
AAN L +L+P Y++L+NIY+ G D + VR+L++ G+KK PG SW+E +R
Sbjct: 534 KAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRR- 592
Query: 425 IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSD----EEKKRILMTH 480
IH F A D HP +IQ+ L +++ +++ GY P +RS D E++ L H
Sbjct: 593 IHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHH 652
Query: 481 SEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDG 540
SEKLA++FGL++T G + + KNLRIC DCH + S+V+ REI VRD+ RFH F+DG
Sbjct: 653 SEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDG 712
Query: 541 KCSCGNYW 548
+CSCG YW
Sbjct: 713 QCSCGGYW 720
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 161/321 (50%), Gaps = 23/321 (7%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFT-SDLYVGNTMIGMYVKCGFLGCSRKVFD 112
+ K C D+ G+ +HA + + F + Y+ N + +Y KC L +R+VFD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHA--LYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 113 EMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+ +V S+ LI AYA +E A LF+E+P D V++ ++ Y + + A +
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 173 FERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDM 231
F M+ A ++ D TL G+I+AC +G+I+ + + + G + V VG+ALI
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVT-----GLDSYVSVGNALITS 182
Query: 232 YSKCGSIDDAYRIFVGMKQ-RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVT 290
YSK G + +A RIF + + R+ S++SM++ + H A++L+ +M + T
Sbjct: 183 YSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFT 242
Query: 291 FIGVLTACSHV-----GLKCY------GVSPSTDHYACMVDLLGR-AGCLEEALKMVEKM 338
VLTA ++V GL+ + G ++ + ++DL + GC+ + K+ +++
Sbjct: 243 LASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI 302
Query: 339 PVEPNGGVWGALLGACQIHRN 359
P+ +W ++ ++ +
Sbjct: 303 S-NPDLVLWNTMISGYSLYED 322
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 174/369 (47%), Gaps = 60/369 (16%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ + + LI Y +G + + L+ MR + FTLS + AC ++
Sbjct: 96 LFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG--IN 153
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE-RDVVSWTELI 126
V L +Q+HA ++ + G S + VGN +I Y K GFL +R++F + E RD VSW ++
Sbjct: 154 VGLIRQLHALSV-VTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMV 212
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
VA Y+Q+ + +A+E + M G+ D
Sbjct: 213 VA-------------------------------YMQHREGSKALELYLEMTVRGLIVDIF 241
Query: 187 TLVGVISACAQ----LGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS-IDDA 241
TL V++A LG +++ + + SG+ N VGS LID+YSKCG + D
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIK----SGYH--QNSHVGSGLIDLYSKCGGCMLDC 295
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
++F + ++ +++MI G++++ + A++ F + +P+ + + V++ACS+
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSN 355
Query: 301 V-----GLKCYGVSPSTDHYA-------CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
+ G + +G++ D + ++ + + G L +A + + MP E N +
Sbjct: 356 MSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYN 414
Query: 349 ALLGACQIH 357
+++ H
Sbjct: 415 SMIAGYAQH 423
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG--PVSFTLSALFKACT 63
R VF+++ + LW +I GY L L D +L C + +G+G P +L + AC+
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDE-ALECFRQLQGVGHRPDDCSLVCVISACS 354
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ S G+Q+H + L ++ + V N +I MY KCG L ++ +FD MPE + VS+
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I YA +G G+ +++ F+RM
Sbjct: 415 SMIAGYAQHG------------------------MGF-------QSLHLFQRMLEMDFTP 443
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
+T + V++ACA G ++ + + FG S +ID+ + G + +A R
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMK-QKFGIEPEAGHFSCMIDLLGRAGKLSEAER 502
Query: 244 IFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQ 274
+ + F +S+++ +HG AI+
Sbjct: 503 LIETIPFDPGFFXWSALLGACRIHGNVELAIK 534
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 305/556 (54%), Gaps = 52/556 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F Q++ F + +IRG + +L++++ LY M GI P +FT + KAC+ +
Sbjct: 86 IFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGA 145
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G QIHA + G D++V N +I MY KCG +
Sbjct: 146 LKEGVQIHAH-VFKAGLEGDVFVQNGLINMYGKCGAI----------------------- 181
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYV 186
E A +F ++ K +W++++ + E + M G +
Sbjct: 182 --------EHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEES 233
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN--NVVVGSALIDMYSKCGSIDDAYRI 244
LV +SAC LG + + G I+ NV V ++LIDMY K GS++ +
Sbjct: 234 ILVSALSACTHLGSPNFGRCI----HGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCV 289
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F M Q+N +SY+ +I G A+HGR A+ +F DM++ P+ V ++GVL+ACSH GL
Sbjct: 290 FQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLV 349
Query: 304 ----KCYG-------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+C+ + P+ HY CMVDL+GRAG L+ A +++ MP++PN VW +LL
Sbjct: 350 NEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLS 409
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
AC++H N EI +IAA ++F+L G+Y++L+N+YA A W DV+R+R + L +
Sbjct: 410 ACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQT 469
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG+S +E +R V ++F + D + P I + + +L+ +GY P++ VL DV ++E
Sbjct: 470 PGFSLVEANRNV-YKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDE 528
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K++ L HS+KLA+AF L+ TS G+ +RI +N+R+C DCH + S + REI VRD
Sbjct: 529 KRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFISVIYEREITVRDRN 588
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DG CSC +YW
Sbjct: 589 RFHHFKDGTCSCKDYW 604
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 133 GDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVI 192
G ME A +F ++ + M+ G V + EA+ + M G+E D T V+
Sbjct: 78 GSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVL 137
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
AC+ LG +K + +G +V V + LI+MY KCG+I+ A +F M +++
Sbjct: 138 KACSLLGALKEGVQIHAHVFKAGLE--GDVFVQNGLINMYGKCGAIEHASVVFEQMDEKS 195
Query: 253 VFSYSSMILGFAMHGRAHAAIQLFGDMV-KTETKPNGVTFIGVLTACSHVGLKCYG---- 307
V S+SS+I A H + L GDM + + + L+AC+H+G +G
Sbjct: 196 VASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIH 255
Query: 308 -----------VSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
V+ T ++D+ ++G LE+ L + + M + N + ++ I
Sbjct: 256 GILLRNISELNVAVKTS----LIDMYVKSGSLEKGLCVFQNM-AQKNRYSYTVIITGLAI 310
Query: 357 H-RNPEIAQIAANHLFE-LEPDKI 378
H R E + ++ L E L PD +
Sbjct: 311 HGRGREALSVFSDMLEEGLAPDDV 334
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 37/198 (18%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG--IGPVSFTLSALFKACTE 64
+VFEQ+ K+ W+++I + + + L M EG S +SAL ACT
Sbjct: 186 VVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSAL-SACTH 244
Query: 65 VLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
+ + G+ IH ILL + ++ V ++I MYVK G L VF M +++ S+
Sbjct: 245 LGSPNFGRCIHG--ILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSY- 301
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
T ++TG + + REA+ F M G+
Sbjct: 302 ------------------------------TVIITGLAIHGRGREALSVFSDMLEEGLAP 331
Query: 184 DYVTLVGVISACAQLGVI 201
D V VGV+SAC+ G++
Sbjct: 332 DDVVYVGVLSACSHAGLV 349
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 220 NNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDM 279
+N+V AL S+ GS++ A IF +++ F Y++MI G A+ L+ +M
Sbjct: 66 SNLVATCAL----SRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEM 121
Query: 280 VKTETKPNGVTFIGVLTACSHVGLKCYGVSPSTDHYAC-----------MVDLLGRAGCL 328
++ +P+ T+ VL ACS +G GV + ++++ G+ G +
Sbjct: 122 LERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAI 181
Query: 329 EEALKMVEKMPVEPNGGVWGALLGA 353
E A + E+M E + W +++GA
Sbjct: 182 EHASVVFEQMD-EKSVASWSSIIGA 205
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 321/594 (54%), Gaps = 58/594 (9%)
Query: 10 EQVKYKNPFL--WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
E + P L W ++ G G ++++++ M +GI P + T+S+L K+
Sbjct: 276 ETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGS 335
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G ++H L G + D Y G ++ MY KCG L +++VFD + R++ +W L+
Sbjct: 336 LGHGTEVHC-FFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVA 394
Query: 128 AYANNGDMESA----------------------------GGLFNELPL-----------K 148
+AN G + A GL ++ L
Sbjct: 395 GHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAP 454
Query: 149 DKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVC 208
+ V+WT++++G +++ +F MQ G++ VT++ ++ ACA L ++ +
Sbjct: 455 NVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELH 514
Query: 209 EIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGR 268
A + VVV +ALIDMY+K GS+ A R+F ++ +N+ ++M+ G A+HG+
Sbjct: 515 CFALRRAYD--GEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQ 572
Query: 269 AHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC------------YGVSPSTDHYA 316
AH A LF DM ++ KP+G+TF +LTAC +GL YGV+P+ +H+A
Sbjct: 573 AHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHA 632
Query: 317 CMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPD 376
CMVDLL R G L+EA+ +E+ P EP WGALL C IH N ++A+ AA HLF+LEP
Sbjct: 633 CMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPH 692
Query: 377 KIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGV-IHEFRAGDLTH 435
NY+ + ++Y M+D+ ++ +K G+ PG+SW + R + + E G H
Sbjct: 693 NSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPH 752
Query: 436 PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSP 495
P + EI + L+ +++ GY P+ + YDV +EEK+ +L+ H+EKLA+ +GL+ +
Sbjct: 753 PETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDK 812
Query: 496 G-ATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
A VR++KN R+C DCH + S + GR+I++RD RFHHF DGKCSC +YW
Sbjct: 813 SRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 866
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 173/417 (41%), Gaps = 38/417 (9%)
Query: 14 YKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQ 73
+K+ LW + G +I+ + MR G+ + + AC G+
Sbjct: 140 WKDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRA 199
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+HA + +G + V + GMY + + + V VV+W +I G
Sbjct: 200 VHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLG 259
Query: 134 DMESAGGLFNELPLKDKVA---------WTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ A L + + + W +++G ++ + REA+ RM G+ D
Sbjct: 260 LVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPD 319
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
T+ ++ + A G + + V G P + G+AL+DMY+KCG +D A R+
Sbjct: 320 AATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSP--DAYTGTALVDMYAKCGRLDIAQRV 377
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL- 303
F G++ RN+ +++S++ G A G A++L M + PN T+ G++T + GL
Sbjct: 378 FDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLS 437
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMP---VEPNGGVWGAL 350
K GV+P+ + ++ G +++ +M ++P+ L
Sbjct: 438 SQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVL 497
Query: 351 LGACQ----IHRNPEIAQIAANHLFELEPDKIGNYII---LSNIYASAGMWDDVSRV 400
L AC + + E+ H F L G ++ L ++YA AG RV
Sbjct: 498 LRACAGLALLTKGKEL------HCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRV 548
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 131/302 (43%), Gaps = 41/302 (13%)
Query: 1 MDSFPRLVFEQVKYK----NPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLS 56
+ S L+ Q+K N WT+LI G G +DS + + M+++GI P T+
Sbjct: 436 LSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTML 495
Query: 57 ALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPE 116
L +AC + ++ G+++H L + ++ V +I MY K G L +++VF +
Sbjct: 496 VLLRACAGLALLTKGKELHC-FALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQG 554
Query: 117 RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+++V ++ A +G A LF++ M
Sbjct: 555 KNLVCCNAMLTGLAVHGQAHEAAALFHD-------------------------------M 583
Query: 177 QYAGVETDYVTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
+G++ D +T +++AC +G++ A ++ ++ G P + ++D+ ++
Sbjct: 584 WRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAE--HHACMVDLLARR 641
Query: 236 GSIDDAYR-IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGV 294
G +D+A I + S+ +++ G A+HG A + K E N ++ +
Sbjct: 642 GYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPH-NSANYLAM 700
Query: 295 LT 296
++
Sbjct: 701 MS 702
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 285/500 (57%), Gaps = 60/500 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+++ N +LWT+LI GY+ ++ SL+ MRRE I ++FT+S++ KA +
Sbjct: 57 VFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTR 116
Query: 68 VSLGQQIHAQTILLGGFT------SDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVS 121
GQ ++ GF D+ N MI Y + +RK FD MPER+VVS
Sbjct: 117 FKGGQAVY-------GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVS 169
Query: 122 WTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYV-------------------- 161
WT +I Y GDM A LF+ +P+KD +W MV+GY+
Sbjct: 170 WTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKN 229
Query: 162 ------------QNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCE 209
+N +P +A+E FER + ++ D ++G+ISAC+QLG+I A +
Sbjct: 230 LVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESI-- 287
Query: 210 IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRA 269
I G ++++ V ++LIDMY+KCGSI+ A ++F +++ YS+MI A HG
Sbjct: 288 IHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLG 347
Query: 270 HAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCYGVSPSTDHYAC 317
AI LF M + KP+ VTF+GVLTAC+H GL + +G+ PS HYAC
Sbjct: 348 RDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYAC 407
Query: 318 MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+VDLLGR GCLEEA ++ MP+ P+ VWGALL AC++H N ++A++AA LF++EPD
Sbjct: 408 VVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDN 467
Query: 378 IGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPN 437
GNYI+LSNIYA+AG W V++VR ++ ++KN G SW+E V+HEF GD++H +
Sbjct: 468 SGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSH-VVHEFVMGDMSHTD 526
Query: 438 STEIQQALGDLLDRLQADGY 457
S I L L + ++ GY
Sbjct: 527 SDSISLILYLLCEDMKLSGY 546
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 61/316 (19%)
Query: 72 QQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN 131
+ IHA+ ++ S +V N ++ +Y + G + KVFDE+ + + WT LI Y
Sbjct: 19 KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVE 78
Query: 132 NGDMESAGGL---------------------------------------FNELPLKDKVA 152
N + A L F+E+ KD V+
Sbjct: 79 NRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVS 138
Query: 153 WTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAE 212
W M++GY N + A ++F+RM E + V+ +I + G + A + +
Sbjct: 139 WNMMISGYGNNDRVDIARKFFDRMP----ERNVVSWTSMICGYVKAGDMAEAQVLFDSM- 193
Query: 213 GSGFGPINNVVVGSALIDMYSKCGSIDDAYR-IFVGMKQRNVFSYSSMILGFAMHGRAHA 271
P+ ++ + ++ Y G + R +F M +N+ ++S+MI G+A +G+
Sbjct: 194 -----PVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLK 248
Query: 272 AIQLFGDMVKTETKPNGVTFIGVLTACSHVGL---------KCYGVSPSTDH--YACMVD 320
A++LF + + KP+ +G+++ACS +G+ G S +D + ++D
Sbjct: 249 ALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLID 308
Query: 321 LLGRAGCLEEALKMVE 336
+ + G +E+AL+M E
Sbjct: 309 MYAKCGSIEKALQMFE 324
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q+ KN W+ +I GY G ++ L+ + + I P + + AC+++
Sbjct: 219 RCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQL 278
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + I + SDL V ++I MY KCG + + ++F+ +D++ ++ +
Sbjct: 279 GIIDAAESI-IHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTM 337
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A AN+G R+AI F++MQ A ++ D
Sbjct: 338 IAALANHG-------------------------------LGRDAIFLFDKMQRANIKPDS 366
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT +GV++AC G++ + ++ E G P + ++D+ + G +++AY +
Sbjct: 367 VTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHY--ACVVDLLGRVGCLEEAYNL 424
Query: 245 FVGMKQRNVFSYSSMILGFAMHG-RAHAAIQL 275
M + S++ G + R H +QL
Sbjct: 425 IRNMP----IAPHSVVWGALLAACRVHCNVQL 452
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 188 LVGVISACAQLGVIK--YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
++ +I C L +K +A + E + S IN L+ +YS+ G+ D A+++F
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINK------LLRLYSRFGATDYAHKVF 58
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV---- 301
+ Q N + ++S+I G+ + + A LF M + T VL A + +
Sbjct: 59 DEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFK 118
Query: 302 -GLKCYGVS------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
G YG + + M+ G ++ A K ++MP E N W +++ C
Sbjct: 119 GGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMP-ERNVVSWTSMI--C 175
Query: 355 QIHRNPEIAQIAANHLFELEPDK-IGNYIILSNIYASAGMWDDVSR 399
+ ++A+ A LF+ P K + ++ ++ + Y G + + +R
Sbjct: 176 GYVKAGDMAE--AQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGAR 219
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/501 (38%), Positives = 289/501 (57%), Gaps = 48/501 (9%)
Query: 9 FEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDV 68
F V+ N ++ ALIRG + + + ++ Y M R + P S++ S+L KACT ++D
Sbjct: 33 FANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDS 92
Query: 69 SLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVA 128
+ G+ +H + GF S ++V T+I Y G +G SR+VFD+MPERDV +WT +I A
Sbjct: 93 AFGEAVHGH-VWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISA 151
Query: 129 YANNGDMESAGGLF-------------------------------NELPLKDKVAWTAMV 157
+ +GDM SAG LF N++P +D ++WT M+
Sbjct: 152 HVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMM 211
Query: 158 TGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFG 217
Y +N + +E I F + G+ D VT+ VISACA LG + V GF
Sbjct: 212 NCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFD 271
Query: 218 PINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFG 277
+V +GS+LIDMY+KCGSID A +F ++ +N+F ++ +I G A HG A+++FG
Sbjct: 272 L--DVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFG 329
Query: 278 DMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDLLGRA 325
+M + +PN VTFI +LTAC+H G ++ Y ++P +HY CMVDLL +A
Sbjct: 330 EMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKA 389
Query: 326 GCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILS 385
G LE+AL+M+ M VEPN +WGALL C++H+N EIA IA +L LEP G+Y +L
Sbjct: 390 GLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLV 449
Query: 386 NIYASAGMWDDVSRVRRLLKMTGLKKN-PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQA 444
N+YA W++V+++R +K G++K PG SW+E ++ V H F A D HP+ +++
Sbjct: 450 NMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTV-HLFAASDTYHPSYSQLHLL 508
Query: 445 LGDLLDRLQADGYQPNLRSVL 465
L +L D+L+ GY P L S+L
Sbjct: 509 LAELDDQLRLAGYVPELGSIL 529
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
+F Q+ ++ WT ++ Y K+ I+L+ + +G+ P T++ + AC +
Sbjct: 193 EFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHL 252
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++LG+++H ++L GF D+Y+G+++I MY KCG + + VF ++ +++ W +
Sbjct: 253 GALALGKEVHLY-LVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCI 311
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I A +G +E EA+ F M+ + +
Sbjct: 312 IDGLATHGYVE-------------------------------EALRMFGEMERKRIRPNA 340
Query: 186 VTLVGVISACAQLGVIKYA-NWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + +++AC G I+ W + + P V ++D+ SK G ++DA +
Sbjct: 341 VTFISILTACTHAGFIEEGRRWFMSMVQDYCIAP--QVEHYGCMVDLLSKAGLLEDALEM 398
Query: 245 FVGMK-QRNVFSYSSMILGFAMHGR---AHAAIQ 274
M + N F + +++ G +H AH A+Q
Sbjct: 399 IRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQ 432
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/557 (36%), Positives = 321/557 (57%), Gaps = 58/557 (10%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ + VF ++ K W ALI G+ + S+ + M+ G+ P SFT+ +L AC
Sbjct: 802 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 861
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
+++ + LG+++H I+ DL+V +++ +Y+ C
Sbjct: 862 SKLKSLRLGKEVHG-FIIRNWLERDLFVYLSVLSLYIHC--------------------- 899
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE 182
G++ + LF+ + K V+W ++TGY+QN P A+ F +M G++
Sbjct: 900 ----------GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 949
Query: 183 TDYVTLVGVISACA-----QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
++++ V AC+ +LG +A + + E F + +LIDMY+K GS
Sbjct: 950 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF-------IACSLIDMYAKNGS 1002
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I + ++F G+K+++ S+++MI+G+ +HG A AI+LF +M +T P+ +TF+GVLTA
Sbjct: 1003 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 1062
Query: 298 CSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMV-EKMPVEPNG 344
C+H GL +G+ P+ HYAC++D+LGRAG L++AL++V E+M E +
Sbjct: 1063 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 1122
Query: 345 GVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLL 404
G+W +LL +C+IH+N E+ + A LFELEP+K NY++LSN+YA G W+DV +VR+ +
Sbjct: 1123 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 1182
Query: 405 KMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSV 464
L+K+ G SW+E +R V F G+ EI+ L ++ GY+P+ SV
Sbjct: 1183 NEMSLRKDAGCSWIELNRKVF-SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 1241
Query: 465 LYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGR 524
+D+S+EEK L HSEKLAL +GL+ TS G T+R+ KNLRIC DCH S+V+ R
Sbjct: 1242 QHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 1301
Query: 525 EIVVRDNMRFHHFQDGK 541
EIVVRDN RFHHF++G+
Sbjct: 1302 EIVVRDNKRFHHFKNGE 1318
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R VF+ ++ KN F W A+I Y + + + M + P FT + KAC
Sbjct: 495 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 554
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ DV +G +H ++ G D++VGN ++ Y GF+
Sbjct: 555 MSDVGIGLAVHG-LVVKTGLVEDVFVGNALVSFYGTHGFV-------------------- 593
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI----EYFERMQYAG 180
A LF+ +P ++ V+W +M+ + N E+ E E
Sbjct: 594 -----------TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 642
Query: 181 VETDYVTLVGVISACA---QLGVIKYAN-WVCEIAEGSGFGPINNVVVGSALIDMYSKCG 236
D TLV V+ CA ++G+ K + W ++ +V+ +AL+DMYSKCG
Sbjct: 643 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD------KELVLNNALMDMYSKCG 696
Query: 237 SIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVK--TETKPNGVTFIGV 294
I +A IF +NV S+++M+ GF+ G H + M+ + K + VT +
Sbjct: 697 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 756
Query: 295 LTACSH 300
+ C H
Sbjct: 757 VPVCFH 762
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 48/317 (15%)
Query: 51 VSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKV 110
V L L +A + D+ +G++IH +D + +I MY CG SR V
Sbjct: 438 VREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFV 497
Query: 111 FDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAI 170
FD + +++ W +I +Y+ N L D+V T
Sbjct: 498 FDALRSKNLFQWNAVISSYSRN-------------ELYDEVLET---------------- 528
Query: 171 EYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALID 230
+ E + + D+ T VI ACA + + V + +G + +V VG+AL+
Sbjct: 529 -FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL--VEDVFVGNALVS 585
Query: 231 MYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETK----P 286
Y G + DA ++F M +RN+ S++SMI F+ +G + + L G+M++ P
Sbjct: 586 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 645
Query: 287 NGVTFIGVLTACSH-------VGLKCYGVSPSTDHY----ACMVDLLGRAGCLEEALKMV 335
+ T + VL C+ G+ + V D ++D+ + GC+ A +M+
Sbjct: 646 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMI 704
Query: 336 EKMPVEPNGGVWGALLG 352
KM N W ++G
Sbjct: 705 FKMNNNKNVVSWNTMVG 721
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 40/300 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRRE----GIGPVSFTLSALFKACT 63
+F+ + +N W ++IR + G ++S L M E P TL + C
Sbjct: 599 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 658
Query: 64 EVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWT 123
++ LG+ +H + L +L + N ++ MY KCG ++
Sbjct: 659 REREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSKCG----------------CITNA 701
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG--V 181
++I NN K+ V+W MV G+ + +M G V
Sbjct: 702 QMIFKMNNN---------------KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 746
Query: 182 ETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
+ D VT++ + C + + + F + N +V +A + Y+KCGS+ A
Sbjct: 747 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF--VYNELVANAFVASYAKCGSLSYA 804
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
R+F G++ + V S++++I G A ++ M + P+ T +L+ACS +
Sbjct: 805 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 302/556 (54%), Gaps = 50/556 (8%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQG-HLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
VF + ++ W +I G + ++I ++ M R G P T L + +
Sbjct: 261 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
L QIHA IL D + N ++ Y K G + ++F M ER
Sbjct: 321 TSKLSHQIHA-LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER--------- 370
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
+D+V+W +M++GY+ N +A++ M G D
Sbjct: 371 ---------------------RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCF 409
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T V+SACA + ++ V A + ++VV+GSAL+DMYSKCG ID A R F
Sbjct: 410 TFATVLSACATVATLECGMEVHACAIRACLE--SDVVIGSALVDMYSKCGRIDYASRFFN 467
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
M RN++S++SMI G+A HG A++LF M + P+ +TF+GVL+ACSH+GL
Sbjct: 468 LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDE 527
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
+ YG+ P +HY+CMVDLLGRAG L++ + KMP++PN +W +LGAC
Sbjct: 528 GFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC 587
Query: 355 --QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
R E+ + AA LF ++P NY++LSN+YAS G W+D++R RR ++ +KK
Sbjct: 588 CRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKE 647
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
G SW+ GV H F AGD +HP I L +L +++ GY P ++ LYD+ E
Sbjct: 648 AGCSWVTMKDGV-HVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPEN 706
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNM 532
K+ +L HSEKLA+AF +LT + G +RIMKNLR+C DCH S+V+ R IV+RD+
Sbjct: 707 KEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSN 765
Query: 533 RFHHFQDGKCSCGNYW 548
RFHHF+DGKCSC +YW
Sbjct: 766 RFHHFEDGKCSCRDYW 781
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 46/359 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE- 64
R +F+++ +N W LI GY G +D+ + M EG P F + +AC E
Sbjct: 55 RKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQES 114
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+L G+Q+H I G + + VGN +I MY KCG
Sbjct: 115 MLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCG---------------------- 152
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
D++ A +F + KD V+W +M+TG QN +A++ + M+ G+
Sbjct: 153 ---------DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 203
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
L+ +S+CA LG I EG G +V V + L+ +Y++ + + ++
Sbjct: 204 NFALISALSSCASLGCILLGQQT--HGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRA-HAAIQLFGDMVKTETKPNGVTFIGVLTACS---- 299
F M +R+ S++++I A G + AI++F +M++ PN VTFI +L S
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321
Query: 300 -------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
H + Y V ++ G++G +E ++ +M + W +++
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 48/365 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF + K+ W ++I G +D++ Y SMR+ G+ P +F L + +C +
Sbjct: 158 RSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASL 217
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ LGQQ H + I LG D+ V NT++ +Y + L +KVF M ERD
Sbjct: 218 GCILLGQQTHGEGIKLG-LDMDVSVSNTLLALYAETSRLAECQKVFSWMLERD------- 269
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQN-AKPREAIEYFERMQYAGVETD 184
+V+W ++ + A EAIE F M AG +
Sbjct: 270 ------------------------QVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPN 305
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT + +++ + L K ++ + + + ++ + +AL+ Y K G +++ I
Sbjct: 306 RVTFINLLATVSSLSTSKLSHQIHALI--LKYNVKDDNAIENALLACYGKSGEMENCEEI 363
Query: 245 FVGM-KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
F M ++R+ S++SMI G+ + A+ L M++ + + TF VL+AC+ V
Sbjct: 364 FSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT 423
Query: 303 LKCYGVSPSTDHYAC----------MVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
L+C + AC +VD+ + G ++ A + MPV N W +++
Sbjct: 424 LECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMIS 482
Query: 353 ACQIH 357
H
Sbjct: 483 GYARH 487
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 78 TILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMES 137
+L GF SDL++ NT+I +YV+ G +RK+FDEMP+R+ V+W LI Y NG E
Sbjct: 25 NVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPED 84
Query: 138 AGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQ 197
A G+ E M + G + I AC +
Sbjct: 85 ACGVLKE-------------------------------MIFEGFLPNRFAFGSAIRACQE 113
Query: 198 LGVIKY-ANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSY 256
+ + V A +G V VG+ LI+MY+KCG ID A +F M ++ S+
Sbjct: 114 SMLWRRKGRQVHGYAIRTGLNDA-KVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSW 172
Query: 257 SSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG 302
+SMI G + A++ + M KT P+ I L++C+ +G
Sbjct: 173 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLG 218
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/433 (42%), Positives = 272/433 (62%), Gaps = 29/433 (6%)
Query: 141 LFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACA---- 196
LF+++ + W M+ G V N +AIE++ M+ G + T V+ ACA
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 197 -QLGV----IKYANWVCE-IAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
QLGV + W+ + I E G + NV VG++L+DMY+KCG+++ A +F GM +
Sbjct: 128 LQLGVKIHTLVVKEWIHKCIME---MGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 184
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTET---KPNGVTFIGVLTACSHVGL---- 303
+++ S+ +MI G+A++G AI LF M + KP+G TFIG+L C+H GL
Sbjct: 185 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEG 244
Query: 304 --------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQ 355
+ + ++PS +HY CMVDLLGRAG L+EA +++ MP+E N VWGALLGAC+
Sbjct: 245 RRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACR 304
Query: 356 IHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGY 415
IHR+ ++A++A L ELEP GNY++LSNIY++ WD+ ++VR + ++K PG
Sbjct: 305 IHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGC 364
Query: 416 SWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKR 475
SW+E D G++HEF GD HP S +I L +L +++ GY P VL+D+ +EEK+
Sbjct: 365 SWIEVD-GIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEH 423
Query: 476 ILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFH 535
L HSEKLA+AFGL++ +P A +R++KNLR+C DCH+ + S + GREI VRDN RFH
Sbjct: 424 FLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFH 483
Query: 536 HFQDGKCSCGNYW 548
F++G CSC +YW
Sbjct: 484 CFREGSCSCNDYW 496
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 52/302 (17%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++ R +F Q+K N FLW +IRG + D+I Y MR EG P +FT + KAC
Sbjct: 63 NYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKAC 122
Query: 63 TEVLDVSLGQQIHA--------QTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEM 114
+LD+ LG +IH + I+ G +++VG +++ MY KCG + +R VFD M
Sbjct: 123 ARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 182
Query: 115 PERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFE 174
PE+D+VSW +I YA NG P+EAI+ F
Sbjct: 183 PEKDIVSWGAMIQGYALNG-------------------------------LPKEAIDLFL 211
Query: 175 RMQYA---GVETDYVTLVGVISACAQLGVI----KYANWVCEIAEGSGFGPINNVVVGSA 227
+MQ G++ D T +G++ C G++ +Y N + F ++
Sbjct: 212 QMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF-----FSLTPSIEHYGC 266
Query: 228 LIDMYSKCGSIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
++D+ + G +D+A+++ M + N + +++ +H A +++ E
Sbjct: 267 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 326
Query: 287 NG 288
+G
Sbjct: 327 SG 328
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 278/445 (62%), Gaps = 17/445 (3%)
Query: 118 DVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQ 177
DVVSWT ++ G + A LF+ +P ++ V+W AM++GYV+ + +A+E F+ M+
Sbjct: 164 DVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMR 223
Query: 178 YAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGS 237
GV+ + + AC G + V E SG + + +A++DMY KCG
Sbjct: 224 ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQ--MDEKLATAVVDMYCKCGC 281
Query: 238 IDDAYRIF--VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
+++A+R+F + + + + +++ MI GFA+HGR A++LFG M + P+ VT + VL
Sbjct: 282 VEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVL 341
Query: 296 TACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
TAC+H G+ + YG+ P +HY CMVDL GRAG LEEA K+++ MP+EP+
Sbjct: 342 TACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPD 401
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
GV GAL GA +IH + ++ + + EL+P G Y++L+N+ A+AG W+DV+RVRRL
Sbjct: 402 VGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRL 461
Query: 404 LKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRS 463
+ + K G S +E +G + EF+ G L HP + E+ D++ ++A+GY P+ R
Sbjct: 462 MDERNVSKEAGRSVIEV-QGEVCEFQCGGLCHPRAEEVYAMARDMMREIRAEGYVPDTRD 520
Query: 464 VLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIG 523
VL+ +++EEK+ L+ HSEKLA+AFGLL T PG T+RI KNLR+C DCH S+V
Sbjct: 521 VLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFE 580
Query: 524 REIVVRDNMRFHHFQDGKCSCGNYW 548
R+IVVRD RFHHF+DG+CSC +YW
Sbjct: 581 RQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++F+ + +N W A++ GY+ D++ ++ MR G+ F + ACT
Sbjct: 185 RVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGA 244
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ G+++H + + G D + ++ MY KCG + + +VF+ +P
Sbjct: 245 GALARGREVH-RWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALP---------- 293
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
L K W M+ G+ + + +A++ F RM+ GV D
Sbjct: 294 -------------------LAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDD 334
Query: 186 VTLVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDA 241
VTLV V++ACA G++ Y N+V + +G + ++D+Y + G +++A
Sbjct: 335 VTLVNVLTACAHAGMLSEGRHYFNYVPQ-----RYGIEPKMEHYGCMVDLYGRAGRLEEA 389
Query: 242 YRIFVGM 248
++ M
Sbjct: 390 KKVIQDM 396
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 308/555 (55%), Gaps = 35/555 (6%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSI-SLYCSMRR-EGIGPVSFTLSALFKACTEV 65
+F K+ W +I G I G+ + ++ LYC + PV+F+++ + + +
Sbjct: 222 MFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSL 281
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++V G+Q+H + +L G SD Y+ ++++ MY KCG + + + ++P
Sbjct: 282 VEV--GRQLHGR-VLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP---------- 328
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
+ + G+ G+ + P V+W++MV+GYV N K + ++ F M + D
Sbjct: 329 -LNFLRKGNF----GVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDI 383
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
T+ +ISACA G++++ + + G + VGS+LIDMYSK GS+DDA IF
Sbjct: 384 RTVATIISACANAGILEFGKQIHAYIQKIGLRI--DAYVGSSLIDMYSKSGSLDDALMIF 441
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
+K+ NV ++SMI G A+HG+ AI LF M+ PN VTF+GVL ACSHVGL
Sbjct: 442 EQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIE 501
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
Y ++P +HY MV+L GRAG L EA + + + VW + L +
Sbjct: 502 EGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSS 561
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++H+N + + + L + P YI+LSN+ +S WD+ + VR L+ G+KK P
Sbjct: 562 CRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQP 621
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + IH F GD +HP EI L L+ RL+ GY + + V+ DV +E+
Sbjct: 622 GQSWVQL-KDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQG 680
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ ++ HSEKLAL F ++ TSP +RIMKNLRIC DCH F ASQ++ REI+VRD R
Sbjct: 681 EVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHR 740
Query: 534 FHHFQDGKCSCGNYW 548
FHHF+ CSCG YW
Sbjct: 741 FHHFKQSSCSCGEYW 755
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 212/435 (48%), Gaps = 45/435 (10%)
Query: 8 VFEQVKYKNPFLWTALIRGYI-LQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F+++ +KN WT LI G+ G + SL+ M+ +G P +TLS++ K C+
Sbjct: 89 LFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSREN 148
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
++ G+ IHA IL G D+ + N+++ +Y+KC + F+ M E+DVVSW +I
Sbjct: 149 NIQFGKGIHAW-ILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMI 207
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
AY GD+E + +F P KD V+W ++ G +Q R A+E M G E V
Sbjct: 208 GAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPV 267
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T + + L +++ + FG ++ + S+L++MY KCG +D A I
Sbjct: 268 TFSIALILVSSLSLVEVGRQLH--GRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILK 325
Query: 247 GM-----------------KQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
+ K R V S+SSM+ G+ +G+ ++ F MV +
Sbjct: 326 DVPLNFLRKGNFGVTCKEPKARMV-SWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384
Query: 290 TFIGVLTACSHVGLKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKM 338
T +++AC++ G+ +G + D Y + ++D+ ++G L++AL + E++
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444
Query: 339 PVEPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAG 392
EPN +W +++ C +H + A LFE + P+++ ++ + N + G
Sbjct: 445 K-EPNVVLWTSMISGCALHGQGK----EAISLFEGMLNLGIIPNEV-TFVGVLNACSHVG 498
Query: 393 MWDDVSRVRRLLKMT 407
+ ++ R R++K T
Sbjct: 499 LIEEGCRYFRMMKDT 513
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 34/193 (17%)
Query: 88 LYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYAN-NGDMESAGGLFNELP 146
L N ++ +YVK L + K+FDE+ ++ +WT LI +A G E LF E
Sbjct: 67 LNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFRE-- 124
Query: 147 LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANW 206
MQ G + TL V+ C++ I++
Sbjct: 125 -----------------------------MQADGACPNQYTLSSVLKCCSRENNIQFGKG 155
Query: 207 VCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMH 266
+ +G G +VV+ ++++D+Y KC + A F M +++V S++ MI +
Sbjct: 156 IHAWILRNGVG--GDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLRE 213
Query: 267 GRAHAAIQLFGDM 279
G ++++F +
Sbjct: 214 GDVEKSLEMFRNF 226
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
++FEQ+K N LWT++I G L G K++ISL+ M GI P T + AC+ V
Sbjct: 439 MIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHV 497
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 314/570 (55%), Gaps = 64/570 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYI-------LQGHLKDSISLYCSMRREGIGPVSFTL 55
++ +LVF ++ W ++IRG+ LQ + + L S R P ++T
Sbjct: 449 AYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHAR----PDTYTF 504
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S L KAC E + +++H G ++ G+
Sbjct: 505 SFLLKACEEAKEEGKCREVH--------------------GFIIRFGY------------ 532
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
++DVV T LI +YA NG +E+A +F E+P +D V+W +M++ Y Q EA++ +++
Sbjct: 533 DQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQ 592
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ + V D TLV ++S+CA +G + + A + N+ VG+ALIDMY+KC
Sbjct: 593 MRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRL--VENIFVGNALIDMYAKC 650
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS+ A IF M +R+VF+++SMI+G+ +HGR AI FG M+ +PN +TF+G+L
Sbjct: 651 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 710
Query: 296 TACSHVGLKCYGV------------SPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
CSH GL GV P HY CMVDL GRAG L+EAL+++ P + +
Sbjct: 711 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 770
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+W LLG+C+IHRN EI ++A +L +L G+ ++LS IYA A V+R+R+L
Sbjct: 771 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 830
Query: 404 LKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
++ G+K PG+SW+E GD+ +H F D +HP+S EI + L +++ R GY
Sbjct: 831 IQSRGIKTTPGWSWIEVGDQ--VHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEES 888
Query: 463 SVLYDVSDEEKKRILMT----HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
S++ ++ T HSEKLA+A+GL T G ++ I+KNLR+C DCH F
Sbjct: 889 SLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFV 948
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S+ REI+VRD +RFHHF+ G CSC +W
Sbjct: 949 SKAFDREIIVRDRVRFHHFRGGHCSCKEFW 978
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 301/540 (55%), Gaps = 47/540 (8%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + ++ W +I Y +++ ++ MR EG FT+S++ AC
Sbjct: 108 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVN 167
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
D +++H ++ +LYVG ++ +Y KCG + + +VF+ M +
Sbjct: 168 CDALECKKLHCLSVK-TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD--------- 217
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
K V W++MV GYVQN EA+ + R Q +E +
Sbjct: 218 ----------------------KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 255
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TL VI AC+ L + + + SGFG +NV V S+ +DMY+KCGS+ ++Y IF
Sbjct: 256 FTLSSVICACSNLAALIEGKQMHAVICKSGFG--SNVFVASSAVDMYAKCGSLRESYIIF 313
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-- 303
++++N+ ++++I GFA H R + LF M + PN VTF +L+ C H GL
Sbjct: 314 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 373
Query: 304 ----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGA 353
YG+SP+ HY+CMVD+LGRAG L EA ++++ +P +P +WG+LL +
Sbjct: 374 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 433
Query: 354 CQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNP 413
C++++N E+A++AA LFELEP+ GN+++LSNIYA+ W+++++ R+LL+ +KK
Sbjct: 434 CRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVR 493
Query: 414 GYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
G SW++ + +H F G+ HP EI L +L+ + + GY+P++ L+DV +K
Sbjct: 494 GKSWID-IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKK 552
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+ +LM HSEKLAL FGL+ + VRIMKNLRIC DCH FM AS R I+VRD R
Sbjct: 553 EELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 179/433 (41%), Gaps = 85/433 (19%)
Query: 18 FLWTALIRGYIL-----QGHLKDSISLYCSMRREGIGPVSFT--------LSALFKACTE 64
F LIR +L L +IS+ S +E + P ++ + + + C
Sbjct: 6 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 65
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
V + H + I + D+ + N +I Y KCGF+ +R+VFD M ER +
Sbjct: 66 NGAVMEAKACHGKIIRID-LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL----- 119
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
V+W M+ Y +N EA++ F M+ G +
Sbjct: 120 --------------------------VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 153
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPIN-------NVVVGSALIDMYSKCGS 237
T+ V+SAC GV C+ E ++ N+ VG+AL+D+Y+KCG
Sbjct: 154 EFTISSVLSAC---GV------NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 204
Query: 238 IDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTA 297
I DA ++F M+ ++ ++SSM+ G+ + A+ L+ + + N T V+ A
Sbjct: 205 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 264
Query: 298 CS-----------HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
CS H + G + + VD+ + G L E+ + ++ E N +
Sbjct: 265 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLEL 323
Query: 347 WGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMWDDVSRV 400
W ++ H P+ I LFE + P+++ +LS + G+ ++ R
Sbjct: 324 WNTIISGFAKHARPKEVMI----LFEKMQQDGMHPNEVTFSSLLS-VCGHTGLVEEGRRF 378
Query: 401 RRLLKMT-GLKKN 412
+L++ T GL N
Sbjct: 379 FKLMRTTYGLSPN 391
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 187/458 (40%), Positives = 281/458 (61%), Gaps = 18/458 (3%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIG-PVSFTLSALF 59
MD RL F QV N FL+ ++IR Y D I +Y + R+ P FT +F
Sbjct: 58 MDYATRL-FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 60 KACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDV 119
K+C + LG+Q+H G + N +I MY+K L + KVFDEM ERDV
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGP-RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 120 VSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
+SW L+ YA G M+ A GLF+ + K V+WTAM++GY EA+++F MQ A
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G+E D ++L+ V+ +CAQLG ++ W+ AE GF + V +ALI+MYSKCG I
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF--LKQTGVCNALIEMYSKCGVIS 293
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
A ++F M+ ++V S+S+MI G+A HG AH AI+ F +M + + KPNG+TF+G+L+ACS
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 300 HVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
HVG+ + Y + P +HY C++D+L RAG LE A+++ + MP++P+ +W
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
G+LL +C+ N ++A +A +HL ELEP+ +GNY++L+NIYA G W+DVSR+R++++
Sbjct: 414 GSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNE 473
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQAL 445
+KK PG S +E + ++ EF +GD + P TEI L
Sbjct: 474 NMKKTPGGSLIEVN-NIVQEFVSGDNSKPFWTEISIVL 510
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 135/317 (42%), Gaps = 49/317 (15%)
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVE-TDYVTLVGVI 192
DM+ A LFN++ + + +++ Y N+ + I ++++ E D T +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 193 SACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRN 252
+CA LG V FGP +VV +ALIDMY K + DA+++F M +R+
Sbjct: 117 KSCASLGSCYLGKQVH--GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 253 VFSYSSMILGFAMHGRAHA-------------------------------AIQLFGDMVK 281
V S++S++ G+A G+ A+ F +M
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 282 TETKPNGVTFIGVLTACSHVG-------LKCY----GVSPSTDHYACMVDLLGRAGCLEE 330
+P+ ++ I VL +C+ +G + Y G T ++++ + G + +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 331 ALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIAANHL--FELEPDKIGNYIILSNIY 388
A+++ +M + + W ++ H N A N + +++P+ I ++ L +
Sbjct: 295 AIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI-TFLGLLSAC 352
Query: 389 ASAGMWDDVSRVRRLLK 405
+ GMW + R +++
Sbjct: 353 SHVGMWQEGLRYFDMMR 369
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 304/536 (56%), Gaps = 49/536 (9%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RL FE + Y + L + +I Y + + L+ + R + P ++LS++ +ACT +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ + G+QIH I +G SDL+VGN ++ Y KC
Sbjct: 378 VQLDFGKQIHNHAIKIG-HESDLFVGNALMDFYAKCN----------------------- 413
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
DM+S+ +F+ L ++V+W +V G+ Q+ EA+ F MQ A +
Sbjct: 414 --------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465
Query: 186 VTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
VT V+ ACA I++A + C I E S F N+ V+G++LID Y+KCG I DA ++
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSI-EKSTFN--NDTVIGNSLIDTYAKCGYIRDALKV 522
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK 304
F + +R++ S++++I G+A+HG+A A++LF M K+ + N +TF+ +L+ CS GL
Sbjct: 523 FQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLV 582
Query: 305 CYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLG 352
+G+S PS +HY C+V LLGRAG L +AL+ + +P P+ VW ALL
Sbjct: 583 NHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642
Query: 353 ACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKN 412
+C IH+N + + +A + E+EP Y++LSN+YA+AG D V+ +R+ ++ G++K
Sbjct: 643 SCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKV 702
Query: 413 PGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEE 472
PG SW+E +G IH F G + HP+ I L L + +GY P++ VL+DV E+
Sbjct: 703 PGLSWVE-IKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQ 761
Query: 473 KKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
K R+L HSE+LALA+GL+ T PG +RI+KNLR C DCH S+++ REI+V
Sbjct: 762 KTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 46/361 (12%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF + K+ +WTA++ Y +++ ++ MR G P F L+++ KA +
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
V LG+ IH I T + +VG ++ MY KCG
Sbjct: 279 VVLGKGIHGCAIKTLNDT-EPHVGGALLDMYAKCG------------------------- 312
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
D++ A F +P D + + M++ Y Q+ + +A E F R+ + V + +
Sbjct: 313 ------DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 366
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVG 247
L V+ AC + + + + A G +++ VG+AL+D Y+KC +D + +IF
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHA--IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424
Query: 248 MKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------HV 301
++ N S++++++GF+ G A+ +F +M + VT+ VL AC+ H
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484
Query: 302 GLKCYGVSPSTDHY-----ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQI 356
G + ST + ++D + G + +ALK+ + + +E + W A++ +
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYAL 543
Query: 357 H 357
H
Sbjct: 544 H 544
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 36/251 (14%)
Query: 49 GPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTS-DLYVGNTMIGMYVKCGFLGCS 107
G SF + + C D G+ +H + GG DL+ N ++ MY K G L +
Sbjct: 56 GVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASA 115
Query: 108 RKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAM-VTGYVQNAKP 166
R++FD MPER++VS+ L+ A+A GD E+A LF L W V +V
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRL------RWEGHEVNQFV----- 164
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGS 226
M + D L G + +CA W G +N VGS
Sbjct: 165 ------LTTMLKLAIAMDAAGLAGGVHSCA---------W--------KLGHDHNAFVGS 201
Query: 227 ALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKP 286
LID YS C + DA +F G+ +++ +++M+ ++ + A ++F M + KP
Sbjct: 202 GLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKP 261
Query: 287 NGVTFIGVLTA 297
N VL A
Sbjct: 262 NPFALTSVLKA 272
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ +N + L++ + +G + + +L+ +R EG F L+ + K +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
L +H+ LG + +VG+ +I Y C +
Sbjct: 176 DAAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVS-------------------- 214
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
A +FN + KD V WTAMV+ Y +N P A F +M+ +G + +
Sbjct: 215 -----------DAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNP 263
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVV--VGSALIDMYSKCGSIDDAYR 243
L V+ A L + + G +N+ VG AL+DMY+KCG I DA
Sbjct: 264 FALTSVLKAAVCLPSVVLGKGI----HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARL 319
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHV 301
F + +V S MI +A + A +LF ++++ PN + VL AC+++
Sbjct: 320 AFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 304/561 (54%), Gaps = 49/561 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLK---DSISLYCSMRREGIG-PVSFTLSAL 58
S+ R +F+Q+ F + +LIR D++ +Y M R G P SFTL+
Sbjct: 78 SYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFA 137
Query: 59 FKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERD 118
KAC+ V + G+Q+H+Q G YV ++ +Y KC + +R VFD M
Sbjct: 138 LKACSVVPALGEGRQLHSQA-FRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMV--- 193
Query: 119 VVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQY 178
GD K+ AW+AM+ GY + EA+ F MQ
Sbjct: 194 --------------GD-------------KNLAAWSAMIGGYSRVGMVNEALGLFREMQA 226
Query: 179 AGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSI 238
A V D VT+V VISACA+ G + WV + G ++ + +ALIDMY+KCG I
Sbjct: 227 ADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGI--TVDLELSTALIDMYAKCGLI 284
Query: 239 DDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ A +F M +R+ ++S+MI+G A+HG A++LF M++ + +PN VTFIGVL+AC
Sbjct: 285 ERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSAC 344
Query: 299 SHVGL-----------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
+H GL + G+ PS ++Y CMVDL R+ L+EA V M + PN +W
Sbjct: 345 AHSGLVNEGRRYWSTMQELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIW 404
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
LL A + +I Q A+ L ELEP NY++LSN+YAS WD VS +R+ +K
Sbjct: 405 RTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKEN 464
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
+ G S +E + G +H+F D +HP EI+ L ++ DR+ G++P +VL+D
Sbjct: 465 NVNVVAGCSSIEIN-GYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHD 523
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V +EEK+ L HSE+LA+A+GLL T +R++KNLR C DCH S+ REI+
Sbjct: 524 VGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDREII 583
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD +RFH F +G CSC ++W
Sbjct: 584 VRDRVRFHRFVEGSCSCKDFW 604
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 310/554 (55%), Gaps = 33/554 (5%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSI-SLYCSMRREGIGPVSFTLSALFKACTEVL 66
+F ++ YK+ W ++ G + G+ + ++ LYC M G + T S + +
Sbjct: 478 MFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYC-MVECGTEFSAVTFSIALILASSLS 536
Query: 67 DVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELI 126
V LG+Q+H +L GF SD ++ ++++ MY KCG + + + ++P DV+
Sbjct: 537 HVELGRQLHGM-VLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVP-LDVLRKGNAR 594
Query: 127 VAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
V+Y P V+W +MV+GYV N K + ++ F M V D
Sbjct: 595 VSYKE--------------PKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR 640
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T+ +ISACA G++++ V + G + VGS+LIDMYSK GS+DDA+ +F
Sbjct: 641 TVTTIISACANAGILEFGRHVHAYVQK--IGHRIDAYVGSSLIDMYSKSGSLDDAWMVFR 698
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ N+ ++SMI G+A+HG+ AI LF +M+ PN VTF+GVL ACSH GL
Sbjct: 699 QSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEE 758
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
Y ++P +H MVDL GRAG L + + K + VW + L +C
Sbjct: 759 GCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSC 818
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
++H+N E+ + + L ++ P G Y++LSN+ AS WD+ +RVR L+ G+KK PG
Sbjct: 819 RLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPG 878
Query: 415 YSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKK 474
SW++ + IH F GD +HP EI L L+ RL+ GY +++ V+ DV +E+ +
Sbjct: 879 QSWIQ-LKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGE 937
Query: 475 RILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRF 534
++ HSEKLA+ FG++ T+ +RI+KNLRIC DCH F+ ASQ++ REI+VRD RF
Sbjct: 938 VLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRF 997
Query: 535 HHFQDGKCSCGNYW 548
HHF+ G CSCG+YW
Sbjct: 998 HHFKHGSCSCGDYW 1011
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 214/440 (48%), Gaps = 43/440 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+++ +N WT LI G+ G + +L+ M+ +G P +TLS++ K C+ +
Sbjct: 346 LFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNN 405
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ LG+ +HA +L G D+ +GN+++ +Y+KC + ++F+ M E DVVSW +I
Sbjct: 406 LQLGKGVHAW-MLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIG 464
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
AY GD+E + +F LP KD V+W +V G +Q R A+E M G E VT
Sbjct: 465 AYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVT 524
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY----- 242
+ + L ++ + + GF ++ + S+L++MY KCG +D A
Sbjct: 525 FSIALILASSLSHVELGRQLHGMVLKFGFD--SDGFIRSSLVEMYCKCGRMDKASIILRD 582
Query: 243 -----------RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTF 291
R+ + + S+ SM+ G+ +G+ ++ F MV+ + T
Sbjct: 583 VPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTV 642
Query: 292 IGVLTACSHVGLKCYG---------VSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPV 340
+++AC++ G+ +G + D Y + ++D+ ++G L++A MV +
Sbjct: 643 TTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAW-MVFRQSN 701
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFE------LEPDKIGNYIILSNIYASAGMW 394
EPN +W +++ +H + A LFE + P+++ ++ + N + AG+
Sbjct: 702 EPNIVMWTSMISGYALHGQG----MHAIGLFEEMLNQGIIPNEV-TFLGVLNACSHAGLI 756
Query: 395 DDVSRVRRLLKMTGLKKNPG 414
++ R R++K NPG
Sbjct: 757 EEGCRYFRMMK-DAYCINPG 775
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 139/302 (46%), Gaps = 42/302 (13%)
Query: 83 GFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLF 142
G L N ++ +Y K + ++K+FDE+P+R+ +WT LI +A G E LF
Sbjct: 319 GSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLF 378
Query: 143 NELPLKDKVAWTAMVTGYVQ------NAKPREAIEYFERMQYAGVETDYVTLVGVISACA 196
E+ K ++ ++ N + + + + M G++ D V ++
Sbjct: 379 REMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAW--MLRNGIDVDVVLGNSILDLYL 436
Query: 197 QLGVIKYANWVCEIA-EGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFS 255
+ V +YA + E+ EG +VV + +I Y + G ++ + +F + ++V S
Sbjct: 437 KCKVFEYAERLFELMNEG-------DVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489
Query: 256 YSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL---TACSHV--GLKCYGV-- 308
+++++ G G A++ MV+ T+ + VTF L ++ SHV G + +G+
Sbjct: 490 WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549
Query: 309 --SPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPV-------------EPNGGV--WGA 349
+D + + +V++ + G +++A ++ +P+ EP G+ WG+
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609
Query: 350 LL 351
++
Sbjct: 610 MV 611
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTE 64
+VF Q N +WT++I GY L G +I L+ M +GI P T + AC+
Sbjct: 695 MVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSH 752
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/561 (35%), Positives = 316/561 (56%), Gaps = 57/561 (10%)
Query: 7 LVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREG-IGPVSFTLSALFKACTEV 65
L+F+++ K+ W +L+ G G L + +S++C M+ + + FT ++ AC
Sbjct: 101 LLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSE 160
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
G +H + LG ++ V N ++ MY K GF+
Sbjct: 161 KACDEGYYVHCCAMKLG-LVYEVKVVNALVNMYGKFGFV--------------------- 198
Query: 126 IVAYANNGDMESAGGLFNELPLKDK--VAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
ESA LF+E+P +K V+W ++V QN P EA F+ M+ G
Sbjct: 199 ----------ESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFP 248
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGF--GPINNVVVGSALIDMYSKCGSIDDA 241
D T+V ++ AC + + + E+ G F G N+ + + L+++YSK G ++++
Sbjct: 249 DDATMVSLLQACENFPLGR----MVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNS 304
Query: 242 YRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE-TKPNGVTFIGVLTACSH 300
++F + + + ++++M+ G+AMHG AI+ F +V+ E +P+ VTF +L+ACSH
Sbjct: 305 RKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSH 364
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
GL Y V P DHY+CMVDLLGR G L++A ++++ MP EPN GVWG
Sbjct: 365 SGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWG 424
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
ALLGAC++HRN ++ + AA +L L+P NYI+LSN+Y++AG+W+D S+VR L+K
Sbjct: 425 ALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKV 484
Query: 409 LKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
L +N G S++E G++ IH F D THP+S I + L +++ ++Q G+ S+L+D
Sbjct: 485 LTRNQGCSFIEHGNK--IHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHD 542
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
V +E K ++ HSEK+ALA+GLL T+ + I+KNLRIC DCH + S V R I+
Sbjct: 543 VDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTII 602
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
+RD RFH F G CSCG+YW
Sbjct: 603 IRDTKRFHQFSGGLCSCGDYW 623
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSM-RREGIGPVSFTLSALFKACTE 64
R VFE++ + WTA++ GY + G K++I + + R EG+ P T + L AC+
Sbjct: 305 RKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSH 364
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
V G+ + L + M+ + +CG L + ++ MP
Sbjct: 365 SGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMP 415
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 303/543 (55%), Gaps = 58/543 (10%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R++ + ++ + W ++I G + G++++++ L+ M I FT ++ K+
Sbjct: 291 RMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASC 350
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
++ +G+ +H+ TI G F + V N ++ MY K G L C+ V
Sbjct: 351 KNLKIGESVHSLTIKTG-FDACKTVSNALVDMYAKQGNLSCALDV--------------- 394
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
FN++ KD ++WT++VTGYV N +A++ F M+ A V+ D
Sbjct: 395 ----------------FNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQ 438
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
+ V SACA+L VI++ V S G + + ++LI MY+KCG ++DA R+F
Sbjct: 439 FVVACVFSACAELTVIEFGRQVHANFIKSSAGSL--LSAENSLITMYAKCGCLEDAIRVF 496
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKC 305
M+ RNV S++++I+G+A +G F M K
Sbjct: 497 DSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKV----------------------- 533
Query: 306 YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQI 365
YG+ P++DHYACM+DLLGRAG + EA ++ +M VEP+ +W +LL AC++H N E+ +
Sbjct: 534 YGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGER 593
Query: 366 AANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVI 425
A +L +LEP Y++LSN+++ AG W+D + +RR +K G+ K PGYSW+E + +
Sbjct: 594 AGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEM-KSQV 652
Query: 426 HEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
H F + D +HP + EI + +++ ++ G+ P++ L D+ +E K+R L HSEKLA
Sbjct: 653 HTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLA 712
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSCG 545
+AFGLLT + GA +RI KNLR+C DCH M S + R I++RD FHHF +GKCSCG
Sbjct: 713 VAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCG 772
Query: 546 NYW 548
++W
Sbjct: 773 DFW 775
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 15/279 (5%)
Query: 91 GNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDK 150
N ++ K G + +RK+FD+MP RD +W +I AYAN G++ A LFNE P+K+
Sbjct: 40 SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99
Query: 151 VAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEI 210
+ W+++V+GY +N E + F +M G + TL V+ AC+ L ++ +
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159
Query: 211 AEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQR-NVFSYSSMILGFAMHGRA 269
A N+ V + L+DMYSKC + +A +F + R N +++M+ G+A +G +
Sbjct: 160 AIKIQLEA--NIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGES 217
Query: 270 HAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLKCY-----------GVSPSTDHYACM 318
AIQ F +M + N TF +LTAC+ + + G P+ + +
Sbjct: 218 LKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSAL 277
Query: 319 VDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
VD+ + G L A +++ M ++ + W +++ C H
Sbjct: 278 VDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTH 315
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 160/345 (46%), Gaps = 46/345 (13%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F + KN W++L+ GY G + + + M +G P +TL ++ +AC+ +
Sbjct: 88 RKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTL 147
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DVVSWTE 124
+ G+ IH I + ++++V ++ MY KC L + +F +P+R + V WT
Sbjct: 148 SLLHTGKMIHCYAIKI-QLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTA 206
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
++ YA NG+ +AI+ F+ M+ G+E++
Sbjct: 207 MLTGYAQNGE-------------------------------SLKAIQCFKEMRNQGMESN 235
Query: 185 YVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRI 244
+ T +++AC + + V SGFGP NV V SAL+DMY+KCG + A I
Sbjct: 236 HFTFPSILTACTSISAYAFGRQVHGCIIWSGFGP--NVYVQSALVDMYAKCGDLASARMI 293
Query: 245 FVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS----- 299
M+ +V ++SMI+G HG A+ LF M + + + T+ VL + +
Sbjct: 294 LDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNL 353
Query: 300 HVGLKCYGVSPSTDHYAC------MVDLLGRAGCLEEALKMVEKM 338
+G + ++ T AC +VD+ + G L AL + K+
Sbjct: 354 KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 309/560 (55%), Gaps = 49/560 (8%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
S+ + F Q+ + + +IR + + + LY MRR GI + S K+C
Sbjct: 55 SYSQRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSC 114
Query: 63 TEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSW 122
L + G Q+H I G D + ++ +Y C G + KVFDEMP
Sbjct: 115 IRFLYLPGGVQVHCN-IFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPH------ 167
Query: 123 TELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG-- 180
+D VAW M++ ++N + R+A+ F+ MQ +
Sbjct: 168 -------------------------RDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYK 202
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
E D VT + ++ ACA L +++ + G+ N+ ++LI MYS+CG +D
Sbjct: 203 CEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLC--NSLISMYSRCGCLDK 260
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
AY +F GM +NV S+S+MI G AM+G AI+ F +M++ P+ TF GVL+ACS+
Sbjct: 261 AYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSY 320
Query: 301 VGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWG 348
G+ + +GV+P+ HY CMVDLLGRAG L++A +++ M V+P+ +W
Sbjct: 321 SGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWR 380
Query: 349 ALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTG 408
LLGAC+IH + + + HL EL+ + G+Y++L NIY+SAG W+ V+ VR+L+K
Sbjct: 381 TLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKS 440
Query: 409 LKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDV 468
++ PG S +E +G +HEF D++H + EI + L ++ +L+ GY L S L+ +
Sbjct: 441 IQTTPGCSTIEL-KGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKM 499
Query: 469 SDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVV 528
D+EK +L HSEKLA+AFG+L T PG +R+ NLR+C DCH F+ S V R++V+
Sbjct: 500 DDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVL 559
Query: 529 RDNMRFHHFQDGKCSCGNYW 548
RD+ RFHHF+ G+CSC +YW
Sbjct: 560 RDHNRFHHFRGGRCSCSDYW 579
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 313/570 (54%), Gaps = 64/570 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYI-------LQGHLKDSISLYCSMRREGIGPVSFTL 55
++ +LVF ++ W ++IRG+ LQ + + L S R P ++T
Sbjct: 74 AYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHAR----PDTYTF 129
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S L KAC E + +++H G ++ G+
Sbjct: 130 SFLLKACEEAKEEGKCREVH--------------------GFIIRFGY------------ 157
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
++DVV T LI +YA NG +E+A +F E+P +D V+W +M++ Y Q EA++ +++
Sbjct: 158 DQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQ 217
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ + V D TLV ++S+CA +G + + A + N+ VG+ALIDMY+KC
Sbjct: 218 MRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRL--VENIFVGNALIDMYAKC 275
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS+ A IF M +R+VF+++SMI+G+ +HGR AI FG M+ +PN +TF+G+L
Sbjct: 276 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 335
Query: 296 TACSHVGLKCYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
CSH GL GV P HY CMVDL GRAG L+EAL+++ P + +
Sbjct: 336 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 395
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+W LLG+C+IHRN EI ++A +L +L G+ ++LS IYA A V+R+R+L
Sbjct: 396 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 455
Query: 404 LKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
++ G+K PG+SW+E GD+ +H F D +HP+S EI + L +++ R GY
Sbjct: 456 IQSRGIKTTPGWSWIEVGDQ--VHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEES 513
Query: 463 SVLYDVSDEEKKRILMT----HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
S++ ++ T HSEKLA+A+GL T G ++ I+KNLR+C DCH F
Sbjct: 514 SLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFV 573
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S REI+VRD +RFHHF+ G CSC +W
Sbjct: 574 SMAFDREIIVRDRVRFHHFKGGHCSCKEFW 603
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 305/561 (54%), Gaps = 60/561 (10%)
Query: 43 MRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCG 102
MRR G+ P +T SA+ ACT+ G+Q+H+ + GF ++++V + ++ MY KC
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHS-LVWKHGFLAEVFVVSALVDMYAKCC 59
Query: 103 FLGCSRKVFDEMPER--------DVVSWTELIVAYANNG--------------------- 133
+ + KVF+EMP D VS++ + A AN G
Sbjct: 60 DMLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV 119
Query: 134 -------DMESAGGLFNELP-------LKDKVAWTAMVTGYVQNAKPREAIEYFERMQYA 179
DM GLFN++ +D V W M+ YV N +A F M+
Sbjct: 120 YINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 179
Query: 180 GVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSID 239
G D + V+ +CA L + + SGF + N+ V S+LI MY+KCGS+
Sbjct: 180 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF--VKNLRVASSLITMYAKCGSLV 237
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS 299
DA++IF + RNV ++++I HG A+ ++LF M++ KP+ +TF+ VL+ACS
Sbjct: 238 DAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACS 297
Query: 300 HVG------------LKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVW 347
H G +K +G+ P +HYAC+VDLL RAG L+ A + +E MP++P+ VW
Sbjct: 298 HTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVW 357
Query: 348 GALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMT 407
GALL AC+ H N + + A LF+LEPD GNY++L NI GM ++ VRR ++
Sbjct: 358 GALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI 417
Query: 408 GLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYD 467
G++K PG SW++ + + F D +H + EI + L L + ++ GY + +
Sbjct: 418 GVRKEPGCSWID-IKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-N 475
Query: 468 VSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIV 527
++E K++ L HSEK+ALAFGLL+ GA +RI KNLR C DCH M AS++ REI+
Sbjct: 476 TAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 535
Query: 528 VRDNMRFHHFQDGKCSCGNYW 548
VRD RFHHF +G CSCG+YW
Sbjct: 536 VRDINRFHHFTNGICSCGDYW 556
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 85/345 (24%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F ++ W +I Y+ + +D+ + + MRR+G P + S++ +C +
Sbjct: 141 LFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAA 200
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G IH Q I+ GF +L V +++I MY KCG L + ++F+E +R+VV WT +I
Sbjct: 201 LYQGTLIHNQ-IIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIA 259
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
A +G W +E FE+M G++ DY+T
Sbjct: 260 ACQQHG----------------HANWV---------------VELFEQMLREGIKPDYIT 288
Query: 188 LVGVISACAQLGVIK----YANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
V V+SAC+ G ++ Y N + ++ G P + + ++D+ S+ G +D A R
Sbjct: 289 FVSVLSACSHTGRVEEGFFYFNSMIKV---HGIYPGHEHY--ACIVDLLSRAGELDRAKR 343
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH--- 300
M KP+ + +L+AC +
Sbjct: 344 FIELMP----------------------------------IKPDASVWGALLSACRNHSN 369
Query: 301 ------VGLKCYGVSPSTD-HYACMVDLLGRAGCLEEALKMVEKM 338
V LK + + P +Y + ++L R G L EA ++ KM
Sbjct: 370 LIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKM 414
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
+D+F +FE+ + +N WTA+I GH + L+ M REGI P T ++
Sbjct: 237 VDAFQ--IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLS 294
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DV 119
AC+ V G I + G ++ + + G L +++ + MP + D
Sbjct: 295 ACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDA 354
Query: 120 VSWTELIVAYANNGDM----ESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
W L+ A N+ ++ E A LF+ P + + + +N EA E +
Sbjct: 355 SVWGALLSACRNHSNLIMGKEVALKLFDLEP-DNPGNYVLLCNILTRNGMLNEADEVRRK 413
Query: 176 MQYAGVETD 184
M+ GV +
Sbjct: 414 MESIGVRKE 422
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 311/547 (56%), Gaps = 27/547 (4%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSAL------FKACTEVLDVSLGQQ 73
W A+I GY G + D++ L+C M + S ++ L +A D+
Sbjct: 184 WNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGV 243
Query: 74 IHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNG 133
+ +L+ G ++ + +G+ + C FDE +V++ YA
Sbjct: 244 CLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTF------YAGCK 297
Query: 134 DMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVIS 193
ME+A +F E+ K V WTA++TGY N K REA+E F M V + + ++
Sbjct: 298 QMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALN 357
Query: 194 ACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNV 253
+C L I+ + A G + VG +L+ MYSKCG + DA +F G+ ++NV
Sbjct: 358 SCCGLEDIERGKVIHAAAVKMGLE--SGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNV 415
Query: 254 FSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL----KCY--- 306
S++S+I+G A HG A+ LF M++ P+G+T G+L+ACSH G+ +C+
Sbjct: 416 VSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRY 475
Query: 307 -----GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPE 361
V+ + +HY MVD+LGR G LEEA +V MP++ N VW ALL AC+ H N +
Sbjct: 476 FGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLD 535
Query: 362 IAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGD 421
+A+ AAN +FE+EPD Y++LSN+YAS+ W +V+ +RR +K G+ K PG SWL
Sbjct: 536 LAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTL- 594
Query: 422 RGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHS 481
+G H+F + D +HP + +I Q L L +L+ GY P+ + L+DV E+K+ +L HS
Sbjct: 595 KGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHS 654
Query: 482 EKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGK 541
E+LA+AFGLL+T G+ + +MKNLR+C DCH + ++++ REIVVRD+ RFH F++G
Sbjct: 655 ERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGI 714
Query: 542 CSCGNYW 548
CSCG+YW
Sbjct: 715 CSCGDYW 721
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 148/296 (50%), Gaps = 14/296 (4%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+Q+ + L+T ++ Y L+++I L+ RR V + +++ K C
Sbjct: 75 RAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLF---RRIPFKDV-VSWNSIIKGCLHC 130
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP--ERDVVSWT 123
D+ +++ + + T++ ++ G + + +F M +RDV +W
Sbjct: 131 GDIVTARKLFDEMP-----RRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWN 185
Query: 124 ELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVET 183
+I Y +NG ++ A LF ++P +D ++W++M+ G N K +A+ F M +GV
Sbjct: 186 AMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCL 245
Query: 184 DYVTLVGVISACAQLGVIKYANWV-CEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAY 242
LV +SA A++ + + C + + + + V ++L+ Y+ C ++ A
Sbjct: 246 SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWH--FDEFVSASLVTFYAGCKQMEAAC 303
Query: 243 RIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
R+F + ++V +++++ G+ ++ + A+++FG+M++ + PN +F L +C
Sbjct: 304 RVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 107 SRKVFDEMPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKP 166
+R +FD++P V +T ++ AYA N + A LF +P KD V+W +++ G +
Sbjct: 74 ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDI 133
Query: 167 REAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYAN---WVCEIAEGSGFGPIN-NV 222
A + F+ M V V+ ++ +LG+++ A W E P++ +V
Sbjct: 134 VTARKLFDEMPRRTV----VSWTTLVDGLLRLGIVQEAETLFWAME--------PMDRDV 181
Query: 223 VVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKT 282
+A+I Y G +DDA ++F M R+V S+SSMI G +G++ A+ LF DMV +
Sbjct: 182 AAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVAS 241
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VF+ + KN W ++I G G +++L+ M REG+ P T++ L AC+
Sbjct: 406 VFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGM 465
Query: 68 VSLGQ-------QIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPER-DV 119
+ + Q + T+ + +TS M+ + +CG L + V MP + +
Sbjct: 466 LQKARCFFRYFGQKRSVTLTIEHYTS-------MVDVLGRCGELEEAEAVVMSMPMKANS 518
Query: 120 VSWTELIVAYANNGDMESAGGLFN---ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERM 176
+ W L+ A + +++ A N E+ A+ + Y +++ E +M
Sbjct: 519 MVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKM 578
Query: 177 QYAGV 181
++ GV
Sbjct: 579 KHNGV 583
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 311/550 (56%), Gaps = 35/550 (6%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKAC 62
++P +F + + F L+R +L L ++L+ RR P SFT L +
Sbjct: 96 AYPLALFRRANSTSAFASNNLLR--VLPHPL--PLTLFSRFRRRN--PHSFTF--LLASI 147
Query: 63 TEVLDVS---------LGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
+ L+ + LG +HA + G DL+V N ++ Y G +G R+VFDE
Sbjct: 148 SNHLNAAGPSASACSFLGSHVHALAVKAGA-AGDLFVRNALVHFYGVSGDVGAMRRVFDE 206
Query: 114 MPE-RDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEY 172
+P RDV++W E++ Y G M A +F+E+P++D+++W+ +V GYV+ + A+
Sbjct: 207 LPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGV 266
Query: 173 FERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
F M GV + +V +SA A+LG++++ +V + + SG NV G+AL+DMY
Sbjct: 267 FRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNV--GAALVDMY 324
Query: 233 SKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFI 292
+KCG + A +F GM++R+VF++++MI G A HG A++LF + P VTF+
Sbjct: 325 AKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFV 384
Query: 293 GVLTACSHVGL------------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPV 340
GVL CS GL + Y + P +HY CMVDLLGRAG + EA++++E M +
Sbjct: 385 GVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHI 444
Query: 341 EPNGGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRV 400
P+ +WG +L +C+ H ++ N L EL+P G Y++LS IYA A WD+V V
Sbjct: 445 APDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREV 504
Query: 401 RRLLKMTGLKKNPGYSWLEGDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPN 460
R+L+ G K+ G+S +E G +H+F GD H +S +I L + RL GY P+
Sbjct: 505 RKLMSSRGTNKSAGWSLMEA-HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPD 563
Query: 461 LRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCG-AS 519
+ SVL+D+ +EEK + HSE+LA+A+G + G+ +RI+KNLR+C DCH F+ G A
Sbjct: 564 VSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFIAGNAD 623
Query: 520 QVIGREIVVR 529
++ G + V R
Sbjct: 624 ELTGVKQVQR 633
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 67/309 (21%)
Query: 1 MDSFPRLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFK 60
M + R VF+++ ++ W+ L+ GY+ + L+ ++ ++ +M +G+ P +
Sbjct: 228 MMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALS 287
Query: 61 ACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVV 120
A + + G+ +H + G + VG ++ MY KCG + +R+VFD M RDV
Sbjct: 288 AAARLGLLEHGKFVH-NVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVF 346
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
+W AM+ G + R+A+E FER G
Sbjct: 347 AW-------------------------------NAMICGLAAHGLGRDAVELFERFISEG 375
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDD 240
+ VT VGV++ C++ G+ +AEG + + I +
Sbjct: 376 LSPTNVTFVGVLNGCSRSGL---------VAEGRRYFKL------------------IVE 408
Query: 241 AYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSH 300
YRI M+ Y M+ G AI+L M P+ V + +L++C
Sbjct: 409 KYRIEPEMEH-----YGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCKT 460
Query: 301 VGLKCYGVS 309
GL GVS
Sbjct: 461 HGLVDLGVS 469
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 299/538 (55%), Gaps = 50/538 (9%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
WT++I Y+ +G D+I L+ M+ +G+ P +T++++ AC + G+ +H+ +
Sbjct: 365 WTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSY-V 423
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
+ G S+L V N +I MY KCG +E A
Sbjct: 424 IKNGMGSNLPVTNALINMYAKCG-------------------------------SVEEAR 452
Query: 140 GLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+++P+KD V+W M+ GY QN P EA+E F MQ + D +T+ V+ ACA L
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLA 511
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+ + G+ +++ V AL+DMY+KCG + A +F + ++++ S++ M
Sbjct: 512 ALDKGREIHGHILRRGY--FSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL-------------KCY 306
I G+ MHG + AI F +M +P+ +F +L ACSH GL +C
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNEC- 628
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
GV P +HYAC+VDLL R G L +A K +E MP++P+ +WG LL C+IH + ++A+
Sbjct: 629 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 688
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A H+FELEPD Y++L+N+YA A W++V ++R+ ++ G K+NPG SW+E G +
Sbjct: 689 AEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVG-GKFN 747
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLAL 486
F AG+ HP + +I L L ++Q + Y R VL + D EK+ I HSEK A+
Sbjct: 748 IFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAM 807
Query: 487 AFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCSC 544
AFG+L PG TVR+ KN R+C DCH S+ EIV+RD+ RFHHF+DG CSC
Sbjct: 808 AFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSC 865
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R +F+++ FLW L+ Y G+ ++S+SL+ M++ G+ +T + + K +
Sbjct: 149 RKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAAL 208
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
V +++H + LG F S+ V N+ L
Sbjct: 209 GKVKECKRVHGYVLKLG-FGSNTAVVNS-------------------------------L 236
Query: 126 IVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDY 185
I AY G +ESA LF+EL D V+W +M+ G V N +E F +M GVE D
Sbjct: 237 IAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDL 296
Query: 186 VTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF 245
TLV V+ ACA +G + + + F VV + L+DMYSKCG+++ A +F
Sbjct: 297 TTLVSVLVACANIGNLSLGRALHGFGVKACFS--EEVVFSNTLLDMYSKCGNLNGATEVF 354
Query: 246 VGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACS------ 299
V M + S++S+I + G AI LF +M +P+ T ++ AC+
Sbjct: 355 VKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD 414
Query: 300 -----HVGLKCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
H + G+ + ++++ + G +EEA + K+PV+ + W ++G
Sbjct: 415 KGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGY 473
Query: 355 QIHRNP-EIAQIAANHLFELEPDKI 378
+ P E ++ + + +PD I
Sbjct: 474 SQNLLPNEALELFLDMQKQFKPDDI 498
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
RLVF ++ K+ W +I GY +++ L+ M+++ P T++ + AC +
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGL 510
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTEL 125
+ G++IH IL G+ SDL+V ++ MY KCG L ++ +FD +P++D++SWT +
Sbjct: 511 AALDKGREIHGH-ILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569
Query: 126 IVAYANNGDMESAGGLFNELPLK----DKVAWTAMVTGYVQNAKPREAIEYFERMQY-AG 180
I Y +G A FNE+ + D+ +++A++ + E ++F M+ G
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629
Query: 181 VETDYVTLVGVISACAQLGVIKYA 204
VE V+ A++G + A
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKA 653
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 49/330 (14%)
Query: 21 TALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTIL 80
A I + G L+++I L + +G S+ ++ + C E + G+++H+ I+
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHS-VII 121
Query: 81 LGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAGG 140
G + D +G ++ MYV CG D+
Sbjct: 122 SNGISVDEALGAKLVFMYVNCG-------------------------------DLVQGRK 150
Query: 141 LFNELPLKDKV-AWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLG 199
+F+++ + DKV W +++ Y + RE++ F++MQ GV + T V+ A LG
Sbjct: 151 IFDKI-MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 209
Query: 200 VIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSM 259
+K V GFG +N V ++LI Y K G ++ A+ +F + + +V S++SM
Sbjct: 210 KVKECKRVHGYVLKLGFG--SNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSM 267
Query: 260 ILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG-------LKCYGV---- 308
I G ++G + +++F M+ + + T + VL AC+++G L +GV
Sbjct: 268 INGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACF 327
Query: 309 SPSTDHYACMVDLLGRAGCLEEALKMVEKM 338
S ++D+ + G L A ++ KM
Sbjct: 328 SEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 87/216 (40%), Gaps = 18/216 (8%)
Query: 154 TAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEG 213
A + + + R AIE + + E + V+ CA+ ++ V +
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSK--SYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 214 SGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAI 273
+G + +G+ L+ MY CG + +IF + VF ++ ++ +A G ++
Sbjct: 123 NGISV--DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 180
Query: 274 QLFGDMVKTETKPNGVTFIGVLTACSHVG------------LKCYGVSPSTDHYACMVDL 321
LF M K N TF VL + +G LK G +T ++
Sbjct: 181 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAA 239
Query: 322 LGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIH 357
+ G +E A + +++ EP+ W +++ C ++
Sbjct: 240 YFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVN 274
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 298/555 (53%), Gaps = 50/555 (9%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
VFE++ K+ WTA+I GY G ++++ + M E + L + AC +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
G+ +H+ + LG F SD++VGN + MY K G
Sbjct: 223 CKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG------------------------- 256
Query: 128 AYANNGDMESAGGLFN-ELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYV 186
DMESA +F + ++ V++T ++ GYV+ + + + F ++ G+E +
Sbjct: 257 ------DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 187 TLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
T +I ACA ++ + F + V S L+DMY KCG ++ A + F
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFD--EDPFVSSILVDMYGKCGLLEHAIQAFD 368
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL--- 303
+ +++S++ F HG AI+ F MV KPN +TFI +LT CSH GL
Sbjct: 369 EIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428
Query: 304 ---------KCYGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGAC 354
K YGV P +HY+C++DLLGRAG L+EA + + +MP EPN W + LGAC
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488
Query: 355 QIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPG 414
+IH + E+ ++AA L +LEP G ++LSNIYA+ W+DV VR ++ +KK PG
Sbjct: 489 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 548
Query: 415 YSWLEGDRGV-IHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEK 473
YSW+ D G H F A D +H + I + L LLD+++A GY P SV D+ D K
Sbjct: 549 YSWV--DVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMK 606
Query: 474 KRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMR 533
+++L HSE++A+AF L++ G + + KNLR+C DCH + S+V GR+I+VRDN R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666
Query: 534 FHHFQDGKCSCGNYW 548
FHHF DG CSCG+YW
Sbjct: 667 FHHFTDGSCSCGDYW 681
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 47/356 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + +N WTA+I G ++I +C MR G P F S+ +AC +
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ +G+Q+H + G S+L+VG+ + MY KCG + + KVF+EMP +D VSWT +I
Sbjct: 122 IEMGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
Y+ G+ E EA+ F++M V D
Sbjct: 181 GYSKIGEFE-------------------------------EALLAFKKMIDEEVTIDQHV 209
Query: 188 LVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIF-V 246
L + AC L K+ V GF +++ VG+AL DMYSK G ++ A +F +
Sbjct: 210 LCSTLGACGALKACKFGRSVHSSVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 247 GMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC-------- 298
+ RNV SY+ +I G+ + + +F ++ + +PN TF ++ AC
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 299 -SHVGLKCYGVSPSTDHY--ACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ + + ++ D + + +VD+ G+ G LE A++ +++ +P W +L+
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLV 382
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 71 GQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYA 130
G+Q+HA ++ G+T ++ N ++ MY KCG
Sbjct: 24 GKQLHA-LLICAGYTPCTFLTNHLVNMYSKCG---------------------------- 54
Query: 131 NNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVG 190
+++ A LF+ +P ++ V+WTAM++G QN+K EAI F M+ G
Sbjct: 55 ---ELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSS 111
Query: 191 VISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQ 250
I ACA LG I+ + +A G G + + VGS L DMYSKCG++ DA ++F M
Sbjct: 112 AIRACASLGSIEMGKQMHCLALKFGIG--SELFVGSNLEDMYSKCGAMFDACKVFEEMPC 169
Query: 251 RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
++ S+++MI G++ G A+ F M+ E + L AC
Sbjct: 170 KDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 184 DYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYR 243
D L VI A+ ++ + + +G+ P + + L++MYSKCG +D A +
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCT--FLTNHLVNMYSKCGELDHALK 61
Query: 244 IFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVG- 302
+F M QRN+ S+++MI G + + + AI+ F M P F + AC+ +G
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 303 ------LKC----YGVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALL 351
+ C +G+ + + D+ + G + +A K+ E+MP + W A++
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMI 179
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 310/538 (57%), Gaps = 48/538 (8%)
Query: 19 LWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQT 78
+W A+ GY G+ K+++ LY M + +F S KAC+++ D+ G+ +HAQ
Sbjct: 144 VWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQ- 202
Query: 79 ILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESA 138
V + D V L+ Y+ +G E A
Sbjct: 203 -------------------------------VLKATEDPDQVVNNALLRLYSEDGCFEEA 231
Query: 139 GGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
+F+ +P ++ V+W +++ G V+ EAIE F MQ G+ +VTL ++ CA++
Sbjct: 232 LRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARV 291
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
+ + + S P + V ++L+DMY+KCG++D R+F GM+ +++ S+++
Sbjct: 292 TALGSGKEIHAVIVKSTAKP--DAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNT 349
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGLK---C---------Y 306
+I G+A++GR A++ F +M+ + P+G+TFI +L+ CSH GL C +
Sbjct: 350 LITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDH 409
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
G+SP+ +HYAC+VD+LGRAG ++EAL++V+ MP +P G +WG+LL +C++H N +A+
Sbjct: 410 GISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAV 469
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
A LFELEP+ GNY++LSNIYA+AGMW+ V VR ++ G+ K G SWL+ + IH
Sbjct: 470 AKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQ-IKSKIH 528
Query: 427 EFRAGDLTH-PNSTEIQQALGDLLDRLQADGYQPNLRSVLYDVSDEEKKRILMTHSEKLA 485
F AG NS E ++ L++ ++ GY P+ VL+DVS+E + + HSE+LA
Sbjct: 529 TFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLA 588
Query: 486 LAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
F L+ T+ G +RI KNLR+C DCH ++ S+V GR IV+RD RFHHF+DG CS
Sbjct: 589 TMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 36/267 (13%)
Query: 8 VFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLD 67
+F+ + ++N W +LI G + + + ++I + M+ +G+G TL+ + C V
Sbjct: 234 MFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTA 293
Query: 68 VSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIV 127
+ G++IHA I+ D V N+++ MY KCG + R+VF+ M +D+ SW LI
Sbjct: 294 LGSGKEIHA-VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLIT 352
Query: 128 AYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETDYVT 187
YA NG M EA+E F+ M +G D +T
Sbjct: 353 GYAINGRMT-------------------------------EAMESFQEMICSGFSPDGIT 381
Query: 188 LVGVISACAQLGVIKYANWVCEIAE-GSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFV 246
+ ++S C+ G+ + E+ + G P V + L+D+ + G I +A I
Sbjct: 382 FIALLSGCSHAGLADDGCRLFEMMKMDHGISP--TVEHYACLVDVLGRAGRIKEALEIVK 439
Query: 247 GMKQRNVFS-YSSMILGFAMHGRAHAA 272
M + S + S++ +HG A
Sbjct: 440 NMPFKPTGSIWGSLLNSCRLHGNVPLA 466
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 219 INNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYS---SMILGFAMHGRAHAAIQL 275
+NN + LI ++S CG +D+A R+F + S +M +G++ +G A+ L
Sbjct: 105 LNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLL 164
Query: 276 FGDMVKTETKPNGVTFIGVLTACSHVGLKCYGVS-----------PSTDHYACMVDLLGR 324
+ +MV + F L ACS +G G + P ++ L
Sbjct: 165 YYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSE 224
Query: 325 AGCLEEALKMVEKMPVEPNGGVWGALLG 352
GC EEAL+M + MP N W +L+
Sbjct: 225 DGCFEEALRMFDGMP-HRNLVSWNSLIA 251
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 295/545 (54%), Gaps = 49/545 (8%)
Query: 20 WTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEVLDVSLGQQIHAQTI 79
W A+I +++ L+ M R G+ FT++++ A T V D+ G+Q H I
Sbjct: 211 WNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMI 270
Query: 80 LLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTELIVAYANNGDMESAG 139
GF + +VG+ +I +Y KC G M
Sbjct: 271 K-SGFHGNSHVGSGLIDLYSKCA------------------------------GSMVECR 299
Query: 140 GLFNELPLKDKVAWTAMVTGY-VQNAKPREAIEYFERMQYAGVETDYVTLVGVISACAQL 198
+F E+ D V W M++G+ + + + F MQ G D + V V SAC+ L
Sbjct: 300 KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNL 359
Query: 199 GVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKCGSIDDAYRIFVGMKQRNVFSYSS 258
V +A S P N V V +AL+ MYSKCG++ DA R+F M + N S +S
Sbjct: 360 SSPSLGKQVHALAIKSDV-PYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNS 418
Query: 259 MILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVLTACSHVGL------------KCY 306
MI G+A HG +++LF M++ + PN +TFI VL+AC H G + +
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERF 478
Query: 307 GVSPSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPNGGVWGALLGACQIHRNPEIAQIA 366
+ P +HY+CM+DLLGRAG L+EA +++E MP P W LLGAC+ H N E+A A
Sbjct: 479 CIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538
Query: 367 ANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRLLKMTGLKKNPGYSWLEGDRGVIH 426
AN LEP Y++LSN+YASA W++ + V+RL++ G+KK PG SW+E D+ V H
Sbjct: 539 ANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKV-H 597
Query: 427 EFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLRSVLY---DVSDEEKKRILMTHSEK 483
F A D +HP EI +G +L +++ GY P++R L +V +E++R L+ HSEK
Sbjct: 598 VFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEK 657
Query: 484 LALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGASQVIGREIVVRDNMRFHHFQDGKCS 543
LA+AFGL++T G + ++KNLRIC DCH + S + GREI VRD RFH F++G CS
Sbjct: 658 LAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCS 717
Query: 544 CGNYW 548
C +YW
Sbjct: 718 CRDYW 722
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 177/391 (45%), Gaps = 62/391 (15%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+++ + + LI Y +G ++ L+ +R +G FTLS + AC +
Sbjct: 95 RRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGD- 153
Query: 66 LDVSLGQQIHAQTILLGGFTSDLY--VGNTMIGMYVKCGFLGCSRKVFDEMPE---RDVV 120
DV L +Q+H ++ G D Y V N ++ Y + GFL +R+VF EM E RD V
Sbjct: 154 -DVGLVRQLHCFVVVCG---HDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEV 209
Query: 121 SWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAG 180
SW +IVA + + A GLF E M G
Sbjct: 210 SWNAMIVACGQHREGMEAVGLFRE-------------------------------MVRRG 238
Query: 181 VETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC-GSID 239
++ D T+ V++A + + + SGF N VGS LID+YSKC GS+
Sbjct: 239 LKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFH--GNSHVGSGLIDLYSKCAGSMV 296
Query: 240 DAYRIFVGMKQRNVFSYSSMILGFAMH-GRAHAAIQLFGDMVKTETKPNGVTFIGVLTAC 298
+ ++F + ++ +++MI GF+++ + + F +M + +P+ +F+ V +AC
Sbjct: 297 ECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSAC 356
Query: 299 SH-----VGLKCYGVSPSTD-------HYACMVDLLGRAGCLEEALKMVEKMPVEPNGGV 346
S+ +G + + ++ +D +V + + G + +A ++ + MP E N
Sbjct: 357 SNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNTVS 415
Query: 347 WGALLGACQIHRNPEIAQIAANHLFELEPDK 377
+++ H ++ + LFEL +K
Sbjct: 416 LNSMIAGYAQHG----VEVESLRLFELMLEK 442
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 23/322 (7%)
Query: 54 TLSALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDE 113
T L KAC D+ G+ +HA Y+ N +Y KCG L ++ F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHA-LYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHL 69
Query: 114 MPERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYF 173
+V S+ LI AYA + + A +F+E+P D V++ ++ Y + + F
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 174 ERMQYAGVETDYVTLVGVISACA-QLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMY 232
E ++ + D TL GVI+AC +G+++ + + + +NN V+ Y
Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLAC-----Y 184
Query: 233 SKCGSIDDAYRIFVGMKQ---RNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGV 289
S+ G + +A R+F M + R+ S+++MI+ H A+ LF +MV+ K +
Sbjct: 185 SRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244
Query: 290 TFIGVLTACSHV-----GLKCYGVSPSTDHY------ACMVDLLGR-AGCLEEALKMVEK 337
T VLTA + V G + +G+ + + + ++DL + AG + E K+ E+
Sbjct: 245 TMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEE 304
Query: 338 MPVEPNGGVWGALLGACQIHRN 359
+ P+ +W ++ ++ +
Sbjct: 305 ITA-PDLVLWNTMISGFSLYED 325
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 50/288 (17%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHL-KDSISLYCSMRREGIGPVSFTLSALFKACTE 64
R VFE++ + LW +I G+ L L +D + + M+R G P + + AC+
Sbjct: 299 RKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSN 358
Query: 65 VLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMPERDVVSWTE 124
+ SLG+Q+HA I + + V N ++ MY KCG + +R+VFD MPE + VS
Sbjct: 359 LSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNS 418
Query: 125 LIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGVETD 184
+I GY Q+ E++ FE M + +
Sbjct: 419 MI-------------------------------AGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 185 YVTLVGVISACAQLGVI----KYANWV----CEIAEGSGFGPINNVVVGSALIDMYSKCG 236
+T + V+SAC G + KY N + C E + S +ID+ + G
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHY---------SCMIDLLGRAG 498
Query: 237 SIDDAYRIFVGMK-QRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTE 283
+ +A RI M +++++ HG A++ + ++ E
Sbjct: 499 KLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLE 546
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 4/181 (2%)
Query: 6 RLVFEQVKYKNPFLWTALIRGYILQGHLKDSISLYCSMRREGIGPVSFTLSALFKACTEV 65
R VF+ + N ++I GY G +S+ L+ M + I P S T A+ AC
Sbjct: 402 RRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHT 461
Query: 66 LDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP-ERDVVSWTE 124
V GQ+ + + MI + + G L + ++ + MP + W
Sbjct: 462 GKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWAT 521
Query: 125 LIVAYANNGDMESAGGLFNE---LPLKDKVAWTAMVTGYVQNAKPREAIEYFERMQYAGV 181
L+ A +G++E A NE L + + + Y A+ EA M+ GV
Sbjct: 522 LLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581
Query: 182 E 182
+
Sbjct: 582 K 582
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 313/570 (54%), Gaps = 64/570 (11%)
Query: 3 SFPRLVFEQVKYKNPFLWTALIRGYI-------LQGHLKDSISLYCSMRREGIGPVSFTL 55
++ +LVF ++ W ++IRG+ LQ + + L S R P ++T
Sbjct: 56 AYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHAR----PDTYTF 111
Query: 56 SALFKACTEVLDVSLGQQIHAQTILLGGFTSDLYVGNTMIGMYVKCGFLGCSRKVFDEMP 115
S L KAC E + +++H G ++ G+
Sbjct: 112 SFLLKACEEAKEEGKCREVH--------------------GFIIRFGY------------ 139
Query: 116 ERDVVSWTELIVAYANNGDMESAGGLFNELPLKDKVAWTAMVTGYVQNAKPREAIEYFER 175
++DVV T LI +YA NG +E+A +F E+P +D V+W +M++ Y Q EA++ +++
Sbjct: 140 DQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQ 199
Query: 176 MQYAGVETDYVTLVGVISACAQLGVIKYANWVCEIAEGSGFGPINNVVVGSALIDMYSKC 235
M+ + V D TLV ++S+CA +G + + A + N+ VG+ALIDMY+KC
Sbjct: 200 MRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRL--VENIFVGNALIDMYAKC 257
Query: 236 GSIDDAYRIFVGMKQRNVFSYSSMILGFAMHGRAHAAIQLFGDMVKTETKPNGVTFIGVL 295
GS+ A IF M +R+VF+++SMI+G+ +HGR AI FG M+ +PN +TF+G+L
Sbjct: 258 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 317
Query: 296 TACSHVGLKCYGVS------------PSTDHYACMVDLLGRAGCLEEALKMVEKMPVEPN 343
CSH GL GV P HY CMVDL GRAG L+EAL+++ P + +
Sbjct: 318 CGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHD 377
Query: 344 GGVWGALLGACQIHRNPEIAQIAANHLFELEPDKIGNYIILSNIYASAGMWDDVSRVRRL 403
+W LLG+C+IHRN EI ++A +L +L G+ ++LS IYA A V+R+R+L
Sbjct: 378 PVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKL 437
Query: 404 LKMTGLKKNPGYSWLE-GDRGVIHEFRAGDLTHPNSTEIQQALGDLLDRLQADGYQPNLR 462
++ G+K PG+SW+E GD+ +H F D +HP+S EI + L +++ R GY
Sbjct: 438 IQSRGIKTTPGWSWIEVGDQ--VHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEES 495
Query: 463 SVLYDVSDEEKKRILMT----HSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFMCGA 518
S++ ++ T HSEKLA+A+GL T G ++ I+KNLR+C DCH F
Sbjct: 496 SLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFV 555
Query: 519 SQVIGREIVVRDNMRFHHFQDGKCSCGNYW 548
S REI+VRD +RFHHF+ G CSC +W
Sbjct: 556 SMAFDREIIVRDRVRFHHFKGGHCSCKEFW 585
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,856,354,446
Number of Sequences: 23463169
Number of extensions: 376129340
Number of successful extensions: 924727
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6931
Number of HSP's successfully gapped in prelim test: 4007
Number of HSP's that attempted gapping in prelim test: 773569
Number of HSP's gapped (non-prelim): 51792
length of query: 548
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 400
effective length of database: 8,886,646,355
effective search space: 3554658542000
effective search space used: 3554658542000
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)