Query 038676
Match_columns 307
No_of_seqs 216 out of 1213
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 13:29:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038676.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038676hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02276 gibberellin 20-oxidas 100.0 2.1E-77 4.6E-82 555.2 31.5 302 1-305 41-354 (361)
2 PLN02216 protein SRG1 100.0 6.2E-77 1.3E-81 550.9 30.3 294 1-303 53-357 (357)
3 PTZ00273 oxidase reductase; Pr 100.0 3.4E-76 7.4E-81 540.7 30.2 289 1-292 6-311 (320)
4 PLN02254 gibberellin 3-beta-di 100.0 3.5E-76 7.5E-81 545.2 30.4 285 1-302 57-353 (358)
5 PLN02758 oxidoreductase, 2OG-F 100.0 3.8E-76 8.3E-81 546.3 29.5 296 1-303 53-359 (361)
6 PLN02750 oxidoreductase, 2OG-F 100.0 1.5E-75 3.3E-80 540.4 31.0 287 1-292 27-328 (345)
7 PLN02515 naringenin,2-oxogluta 100.0 1.9E-75 4.2E-80 540.2 31.2 283 1-291 38-328 (358)
8 PLN03002 oxidoreductase, 2OG-F 100.0 2.4E-75 5.2E-80 536.1 31.0 284 1-293 15-321 (332)
9 PLN02997 flavonol synthase 100.0 3.5E-75 7.6E-80 532.4 31.1 280 1-293 33-317 (325)
10 PLN03178 leucoanthocyanidin di 100.0 1.9E-75 4.2E-80 542.3 29.0 295 1-303 48-358 (360)
11 PLN02485 oxidoreductase 100.0 3.6E-75 7.7E-80 535.6 30.1 291 1-292 8-325 (329)
12 PLN02904 oxidoreductase 100.0 1.1E-74 2.3E-79 535.6 30.9 292 1-302 52-353 (357)
13 PLN02912 oxidoreductase, 2OG-F 100.0 7.6E-75 1.7E-79 535.2 29.5 291 1-302 42-344 (348)
14 PLN02393 leucoanthocyanidin di 100.0 8.9E-75 1.9E-79 537.8 29.1 295 1-302 52-359 (362)
15 PLN02947 oxidoreductase 100.0 1.2E-74 2.7E-79 537.3 28.0 292 1-303 67-371 (374)
16 PLN02639 oxidoreductase, 2OG-F 100.0 3.6E-74 7.7E-79 529.7 30.1 277 1-291 38-323 (337)
17 PLN02299 1-aminocyclopropane-1 100.0 3.8E-74 8.3E-79 525.1 30.1 290 1-304 7-309 (321)
18 PLN02365 2-oxoglutarate-depend 100.0 1.4E-73 3.1E-78 517.9 30.6 276 1-292 6-285 (300)
19 PLN00417 oxidoreductase, 2OG-F 100.0 1.7E-73 3.7E-78 526.3 30.2 290 1-298 45-343 (348)
20 PLN02156 gibberellin 2-beta-di 100.0 2E-73 4.2E-78 522.1 30.3 278 1-292 27-314 (335)
21 COG3491 PcbC Isopenicillin N s 100.0 1.5E-73 3.4E-78 498.3 27.4 288 1-291 6-313 (322)
22 PLN02704 flavonol synthase 100.0 1.8E-73 3.8E-78 524.7 28.9 277 1-291 43-331 (335)
23 KOG0143 Iron/ascorbate family 100.0 8.2E-73 1.8E-77 514.9 29.7 285 1-293 18-311 (322)
24 PLN02403 aminocyclopropanecarb 100.0 5.4E-70 1.2E-74 493.3 29.8 283 1-303 3-296 (303)
25 PLN02984 oxidoreductase, 2OG-F 100.0 7.8E-69 1.7E-73 492.8 28.8 265 1-291 39-323 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 2E-62 4.3E-67 435.3 23.7 244 50-299 1-258 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 9.5E-26 2.1E-30 171.7 8.7 95 157-256 2-98 (98)
28 PF14226 DIOX_N: non-haem diox 99.9 2.2E-24 4.7E-29 169.2 7.1 107 1-112 1-116 (116)
29 PLN03176 flavanone-3-hydroxyla 99.8 1.8E-19 3.9E-24 141.4 9.2 77 1-79 38-115 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 97.0 0.00079 1.7E-08 50.7 3.6 79 159-255 1-100 (100)
31 PRK05467 Fe(II)-dependent oxyg 96.0 0.087 1.9E-06 45.9 10.4 49 193-255 129-177 (226)
32 smart00702 P4Hc Prolyl 4-hydro 95.5 0.16 3.5E-06 42.3 10.1 106 130-255 60-178 (178)
33 PF12851 Tet_JBP: Oxygenase do 93.6 0.23 4.9E-06 41.5 6.3 69 173-255 84-170 (171)
34 PF13532 2OG-FeII_Oxy_2: 2OG-F 92.0 1.6 3.4E-05 36.7 9.5 85 158-252 98-193 (194)
35 TIGR02466 conserved hypothetic 88.1 4.1 8.8E-05 34.9 8.8 38 204-254 160-198 (201)
36 PF13759 2OG-FeII_Oxy_5: Putat 84.2 1.3 2.8E-05 33.3 3.4 37 203-252 63-100 (101)
37 PRK15401 alpha-ketoglutarate-d 77.1 13 0.00029 32.0 7.6 82 159-252 118-210 (213)
38 PF07350 DUF1479: Protein of u 74.5 2.9 6.3E-05 39.7 3.1 51 1-59 50-100 (416)
39 PRK08130 putative aldolase; Va 68.5 6.9 0.00015 33.7 3.9 25 19-43 139-163 (213)
40 PRK08333 L-fuculose phosphate 66.3 6.9 0.00015 32.8 3.4 36 1-43 121-156 (184)
41 PRK05874 L-fuculose-phosphate 58.8 11 0.00024 32.6 3.4 25 19-43 139-163 (217)
42 PRK06833 L-fuculose phosphate 50.2 19 0.00042 30.9 3.5 25 19-43 136-160 (214)
43 PRK06755 hypothetical protein; 47.7 25 0.00053 30.3 3.7 36 1-43 137-172 (209)
44 PRK03634 rhamnulose-1-phosphat 47.4 20 0.00044 32.2 3.3 25 19-43 191-215 (274)
45 PRK08087 L-fuculose phosphate 46.9 23 0.0005 30.5 3.5 25 19-43 134-158 (215)
46 PRK08660 L-fuculose phosphate 46.5 24 0.00053 29.4 3.5 25 19-43 126-150 (181)
47 PF06820 Phage_fiber_C: Putati 44.3 21 0.00046 23.9 2.1 39 172-210 14-62 (64)
48 PF00596 Aldolase_II: Class II 43.2 12 0.00027 31.1 1.2 23 20-42 136-159 (184)
49 TIGR02624 rhamnu_1P_ald rhamnu 42.7 34 0.00075 30.7 4.0 25 19-43 189-213 (270)
50 PRK06357 hypothetical protein; 39.7 40 0.00088 29.1 3.9 25 19-43 142-172 (216)
51 TIGR01086 fucA L-fuculose phos 39.2 34 0.00074 29.4 3.4 25 19-43 133-157 (214)
52 COG2140 Thermophilic glucose-6 38.0 72 0.0016 27.4 5.0 68 156-229 89-158 (209)
53 PRK06557 L-ribulose-5-phosphat 37.9 31 0.00068 29.7 2.9 25 19-43 142-168 (221)
54 TIGR02409 carnitine_bodg gamma 37.8 36 0.00078 31.8 3.5 37 20-59 123-159 (366)
55 cd00379 Ribosomal_L10_P0 Ribos 36.3 1.2E+02 0.0026 24.2 6.0 39 18-56 3-42 (155)
56 TIGR03328 salvage_mtnB methylt 36.0 62 0.0013 27.2 4.4 26 18-43 136-164 (193)
57 PF12791 RsgI_N: Anti-sigma fa 32.6 31 0.00068 22.6 1.6 28 198-229 10-37 (56)
58 cd00398 Aldolase_II Class II A 32.3 34 0.00074 29.1 2.2 25 19-43 136-160 (209)
59 PF01471 PG_binding_1: Putativ 31.3 65 0.0014 20.8 3.0 43 20-62 3-45 (57)
60 PLN00052 prolyl 4-hydroxylase; 30.9 3E+02 0.0065 25.3 8.2 88 158-257 133-253 (310)
61 PF11142 DUF2917: Protein of u 29.2 38 0.00082 23.1 1.6 36 195-231 17-53 (63)
62 PF03668 ATP_bind_2: P-loop AT 29.2 86 0.0019 28.4 4.3 30 25-56 17-46 (284)
63 cd05797 Ribosomal_L10 Ribosoma 27.4 1.9E+02 0.0042 23.2 5.8 39 18-56 5-44 (157)
64 KOG2107 Uncharacterized conser 27.1 71 0.0015 26.4 3.0 39 192-243 102-140 (179)
65 PRK15331 chaperone protein Sic 25.0 76 0.0017 26.2 2.9 42 17-59 8-49 (165)
66 TIGR02410 carnitine_TMLD trime 24.9 87 0.0019 29.3 3.7 37 20-59 115-151 (362)
67 PF11074 DUF2779: Domain of un 23.6 1.7E+02 0.0036 23.1 4.6 38 15-52 54-92 (130)
68 PF12368 DUF3650: Protein of u 23.6 40 0.00086 19.1 0.7 17 35-51 9-25 (28)
69 COG3113 Predicted NTP binding 23.4 2.1E+02 0.0045 21.5 4.7 52 3-62 43-94 (99)
70 PRK00099 rplJ 50S ribosomal pr 23.2 2.5E+02 0.0055 23.0 5.8 40 17-56 5-45 (172)
71 PRK05834 hypothetical protein; 23.1 1.4E+02 0.0029 25.3 4.3 24 20-43 136-161 (194)
72 PRK06754 mtnB methylthioribulo 22.5 81 0.0018 26.9 2.8 24 19-42 148-172 (208)
73 PF11243 DUF3045: Protein of u 22.4 75 0.0016 22.7 2.1 21 23-43 36-56 (89)
74 PF11043 DUF2856: Protein of u 22.2 1.1E+02 0.0025 21.8 2.9 25 44-68 20-44 (97)
75 PRK08193 araD L-ribulose-5-pho 22.0 1.4E+02 0.003 26.0 4.2 25 19-43 142-173 (231)
76 TIGR00222 panB 3-methyl-2-oxob 21.7 2.6E+02 0.0056 25.0 5.8 29 22-50 162-190 (263)
77 PRK09220 methylthioribulose-1- 21.5 98 0.0021 26.3 3.1 26 18-43 144-172 (204)
78 PF01113 DapB_N: Dihydrodipico 21.5 1.4E+02 0.003 23.0 3.7 37 20-56 78-115 (124)
79 cd05796 Ribosomal_P0_like Ribo 21.4 2.4E+02 0.0052 23.0 5.3 39 18-56 3-42 (163)
80 COG0289 DapB Dihydrodipicolina 21.3 2.4E+02 0.0053 25.2 5.5 37 20-56 80-117 (266)
81 PF11848 DUF3368: Domain of un 21.2 1.7E+02 0.0036 18.6 3.4 28 21-54 20-47 (48)
82 PF02668 TauD: Taurine catabol 20.9 1.7E+02 0.0036 25.2 4.6 35 20-57 24-58 (258)
83 PRK00819 RNA 2'-phosphotransfe 20.8 83 0.0018 26.4 2.4 55 192-260 22-80 (179)
84 PF00466 Ribosomal_L10: Riboso 20.7 3.4E+02 0.0074 19.7 5.8 41 17-57 5-46 (100)
85 KOG1602 Cis-prenyltransferase 20.6 1.6E+02 0.0036 26.2 4.2 50 20-69 67-123 (271)
86 cd05795 Ribosomal_P0_L10e Ribo 20.3 2.6E+02 0.0056 23.2 5.3 39 18-56 3-42 (175)
87 COG3695 Predicted methylated D 20.2 46 0.001 25.1 0.7 29 219-250 41-69 (103)
88 TIGR00568 alkb DNA alkylation 20.0 2.2E+02 0.0047 23.6 4.7 57 158-223 96-162 (169)
No 1
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=2.1e-77 Score=555.18 Aligned_cols=302 Identities=27% Similarity=0.419 Sum_probs=265.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||+|||+.+ ...+.+++++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ...+||.+
T Consensus 41 iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~ 119 (361)
T PLN02276 41 VPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGYAS 119 (361)
T ss_pred CCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccccCc
Confidence 799999985 3333345778999999999999999999999999999999999999999999999998754 36789976
Q ss_pred cCC-----CCCceeeeccCCCCch---hHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhh
Q 038676 80 QYP-----QVPLYESMGIDDANVK---EKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDE 150 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~---~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~ 150 (307)
... ..|++|.|.++..... .....+.+|.||+..++||+.+++|+..|.+|+..||++|+++||++ ++|++
T Consensus 120 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 199 (361)
T PLN02276 120 SHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYYRK 199 (361)
T ss_pred cCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 533 2479999988632211 11123345789987789999999999999999999999999999999 78988
Q ss_pred hccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcC
Q 038676 151 HMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNG 230 (307)
Q Consensus 151 ~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG 230 (307)
++..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| +||++|||+||+||+||||
T Consensus 200 ~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p-~pgalVVNiGD~L~~~TNG 277 (361)
T PLN02276 200 FFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRP-RPGALVVNIGDTFMALSNG 277 (361)
T ss_pred HhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCC-CCCeEEEEcHHHHHHHhCC
Confidence 8888889999999999988888899999999999999999999999997 7899999999 9999999999999999999
Q ss_pred cccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhhhhh
Q 038676 231 QLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALKTYC 305 (307)
Q Consensus 231 ~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~~~~ 305 (307)
+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|++++|+||++.+.+. .+.+.++.+++|.
T Consensus 278 ~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~~ 354 (361)
T PLN02276 278 RYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQAFSNWL 354 (361)
T ss_pred ccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 99999999998888899999999999999999999999999999999999999999988873 4566667777654
No 2
>PLN02216 protein SRG1
Probab=100.00 E-value=6.2e-77 Score=550.89 Aligned_cols=294 Identities=24% Similarity=0.425 Sum_probs=257.3
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||+|||+.+ .+++ .+++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ...+||..
T Consensus 53 iPvIDls~~--~~~~-~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~ 129 (357)
T PLN02216 53 IPIIDMKRL--CSST-AMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQ 129 (357)
T ss_pred CCeEEChhc--cCCc-cHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCc
Confidence 799999984 2322 3456899999999999999999999999999999999999999999999999754 35678854
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
... ..|++|.|.+..... ....+|.||+.+++||+.+++|+++|.+|+.+||++|+++||++ ++|.+++.
T Consensus 130 ~~~~~~~~~~d~~e~~~~~~~p~----~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 205 (357)
T PLN02216 130 AFVVSEDQKLDWADMFFLTMQPV----RLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFD 205 (357)
T ss_pred cccccccccCCceeeeeeeccCc----ccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc
Confidence 321 247888887643211 12456889998899999999999999999999999999999999 78887776
Q ss_pred C-cccceeeeeecCCCCcccccccccccCCCceEEEee-CCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 154 S-TSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQ-NQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 154 ~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q-d~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
. ..+.||++|||||+.++..+|+++|||+|+||||+| ++++||||+ ++|+|++|+| +||++|||+||+||+||||+
T Consensus 206 ~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~Wi~V~p-~pgalvVNiGD~L~~~TNG~ 283 (357)
T PLN02216 206 DDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIK-KDGKWVSVKP-LPNALVVNVGDILEIITNGT 283 (357)
T ss_pred cCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEE-ECCEEEECCC-CCCeEEEEcchhhHhhcCCe
Confidence 5 457899999999998888899999999999999999 579999996 7899999999 99999999999999999999
Q ss_pred ccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhhh
Q 038676 232 LYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALKT 303 (307)
Q Consensus 232 ~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~~ 303 (307)
|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|+++|++||++.++.. .++..++.+|+
T Consensus 284 ~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 284 YRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred eeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence 9999999998888899999999999999999999999999999999999999999999983 46666665553
No 3
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=3.4e-76 Score=540.66 Aligned_cols=289 Identities=24% Similarity=0.411 Sum_probs=255.8
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC--CCCCccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK--KPFHGYV 78 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~GY~ 78 (307)
||||||+.+ ..++.+++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... ...+||.
T Consensus 6 iPvIDl~~~-~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~GY~ 84 (320)
T PTZ00273 6 LPVIDVSPL-FGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRGYG 84 (320)
T ss_pred CCEEecHHh-cCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCCCC
Confidence 799999985 3333345778999999999999999999999999999999999999999999999998644 3578998
Q ss_pred ccCC-------CCCceeeeccCCC--CchhH----HhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 038676 79 GQYP-------QVPLYESMGIDDA--NVKEK----VESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE 145 (307)
Q Consensus 79 ~~~~-------~~d~~E~~~~~~~--~~~~~----~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 145 (307)
+.+. ..|++|+|.++.. ..... .....+|.||+.+|+|++.+++|+++|.+|+..|+++|+++||++
T Consensus 85 ~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 164 (320)
T PTZ00273 85 AFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLRALALAIGLR 164 (320)
T ss_pred CccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 7642 2478999987632 11111 112357899998899999999999999999999999999999999
Q ss_pred -hhhhhhccCcccceeeeeecCCCC-cccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhH
Q 038676 146 -KYMDEHMNSTSYLLRVMKYKGPET-TEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDS 223 (307)
Q Consensus 146 -~~~~~~~~~~~~~lr~~~Yp~~~~-~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~ 223 (307)
++|.+.+..+.+.||++|||+++. ++..+|+++|||+|+||||+||.++||||++++|+|++|+| .||++|||+||+
T Consensus 165 ~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p-~pg~lvVNvGD~ 243 (320)
T PTZ00273 165 EDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPP-LEGSFVVNIGDM 243 (320)
T ss_pred HHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCC-CCCeEEEEHHHH
Confidence 788888887888999999999976 35688999999999999999999999999988999999999 999999999999
Q ss_pred HHHHhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh
Q 038676 224 LYAWTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE 292 (307)
Q Consensus 224 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~ 292 (307)
||+||||+||||+|||+.+ ..+|||++||++|+.|++|.|+++++++++|++|++++++||+..++..
T Consensus 244 l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~ 311 (320)
T PTZ00273 244 MEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAE 311 (320)
T ss_pred HHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHH
Confidence 9999999999999999865 4789999999999999999999999999999999999999999999884
No 4
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=3.5e-76 Score=545.20 Aligned_cols=285 Identities=25% Similarity=0.475 Sum_probs=250.3
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||||||+.. .++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ...+||..
T Consensus 57 iPvIDl~~~----------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~ 126 (358)
T PLN02254 57 IPVIDLSDP----------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYGV 126 (358)
T ss_pred CCeEeCCCH----------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccccc
Confidence 799999741 3689999999999999999999999999999999999999999999998754 35678865
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhc-
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHM- 152 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~- 152 (307)
... ..+|+|.|.+..... ....|.||+.+++||+++++|+++|.+|+.+||++|+++||++ ++|...+
T Consensus 127 ~~~~~~~~~~~w~e~~~~~~~p~-----~~~~~~wP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~ 201 (358)
T PLN02254 127 ARISSFFNKKMWSEGFTIMGSPL-----EHARQLWPQDHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGP 201 (358)
T ss_pred cccccccCCCCceeeEEeecCcc-----ccchhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 322 246889887643211 1235789999999999999999999999999999999999999 7776544
Q ss_pred ----cCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHh
Q 038676 153 ----NSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWT 228 (307)
Q Consensus 153 ----~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~T 228 (307)
.++.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+..+|+|++|+| +||++|||+||+||+||
T Consensus 202 ~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~~Wi~V~p-~pgalVVNiGD~lq~~S 280 (358)
T PLN02254 202 KSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSGLQVFREGVGWVTVPP-VPGSLVVNVGDLLHILS 280 (358)
T ss_pred cccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCCceEECCCCEEEEccc-CCCCEEEEhHHHHHHHh
Confidence 4566899999999999888899999999999999999999999999876668999999 99999999999999999
Q ss_pred cCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHhhcccchhhhh
Q 038676 229 NGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTEAGQRAESALK 302 (307)
Q Consensus 229 nG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~ 302 (307)
||+|||++|||+.++..+||||+||++|+.|++|+|+++++++++|++|+++|++||+..+++...+ ..+.++
T Consensus 281 Ng~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~-~~~~~~ 353 (358)
T PLN02254 281 NGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK-ALSLIR 353 (358)
T ss_pred CCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh-hhhhhh
Confidence 9999999999999888899999999999999999999999999999999999999999999874433 334444
No 5
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.8e-76 Score=546.34 Aligned_cols=296 Identities=27% Similarity=0.446 Sum_probs=258.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||+|||+.+ ...+.+++++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ...+||..
T Consensus 53 IPvIDl~~l-~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~ 131 (361)
T PLN02758 53 IPVIDFSRL-VKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQ 131 (361)
T ss_pred CCeEEchhh-cCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccccCc
Confidence 799999985 2333344567899999999999999999999999999999999999999999999999754 35789965
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
... ..|++|.|.+...... ...+|.||+.+++||+.+++|+++|.+|+..||++|+++||++ ++|.+.+.
T Consensus 132 ~~~~~~~~~~d~~e~~~~~~~p~~----~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 207 (361)
T PLN02758 132 AFVFSEDQKLDWCNMFALGVEPHF----IRNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFG 207 (361)
T ss_pred ccccccccccCeeEEEEeeccCcc----ccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhc
Confidence 321 2478888876532111 1246899998899999999999999999999999999999999 88888887
Q ss_pred CcccceeeeeecCCCCcccccccccccCCCceEEEeeCC--CCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 154 STSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQ--VEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 154 ~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~--~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
.+.+.||++|||+|+.++..+|+++|||+|+||||+||+ ++||||+ ++|+|++|+| .||++|||+||+||+||||+
T Consensus 208 ~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~-~~g~Wi~V~p-~pgalVVNiGD~L~~~SNG~ 285 (361)
T PLN02758 208 EAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQIL-KDNTWVPVHP-VPNALVINIGDTLEVLTNGK 285 (361)
T ss_pred CccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeee-eCCEEEeCCC-CCCeEEEEccchhhhhcCCe
Confidence 788899999999998888889999999999999999974 7899995 4799999999 99999999999999999999
Q ss_pred ccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhhh
Q 038676 232 LYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALKT 303 (307)
Q Consensus 232 ~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~~ 303 (307)
|||++|||+.++..+|||++||++|+.|++|.|+++++++++|++|++++|+||+..+++. .++...+.+|+
T Consensus 286 ~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 359 (361)
T PLN02758 286 YKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359 (361)
T ss_pred eecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence 9999999998877899999999999999999999999999999999999999999999883 34444555443
No 6
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-75 Score=540.38 Aligned_cols=287 Identities=26% Similarity=0.432 Sum_probs=253.7
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC-CCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK-PFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 79 (307)
||+|||+.+ .++++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..+||.+
T Consensus 27 iPvIDls~~----~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~ 102 (345)
T PLN02750 27 IPVIDLSVS----TSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGYHD 102 (345)
T ss_pred CCeEECCCC----CcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccCcCc
Confidence 799999973 23457789999999999999999999999999999999999999999999999986543 4579964
Q ss_pred cCC---CCCceeeeccCCCCc---h----hHH--hhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-h
Q 038676 80 QYP---QVPLYESMGIDDANV---K----EKV--ESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-K 146 (307)
Q Consensus 80 ~~~---~~d~~E~~~~~~~~~---~----~~~--~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 146 (307)
... ..|++|.|.+..... + ... ....+|.||+.+++||+++++|++.|.+|+..||++|+++||++ +
T Consensus 103 ~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 182 (345)
T PLN02750 103 SEHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLLELISLSLGLPAD 182 (345)
T ss_pred ccccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 321 248899997752110 0 000 01125899998899999999999999999999999999999999 7
Q ss_pred hhhhhccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEc-cCCceEEcCCCCCCeEEEEchhHHH
Q 038676 147 YMDEHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQT-KNGEWINVKPSSPHSFIAMIGDSLY 225 (307)
Q Consensus 147 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~-~~g~W~~v~p~~~g~~vVnvGd~l~ 225 (307)
+|++.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+. ++|+|++|+| .||++|||+||+||
T Consensus 183 ~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g~Wi~V~p-~pg~~vVNiGD~L~ 261 (345)
T PLN02750 183 RLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGEWIPVKP-IPDAFIINIGNCMQ 261 (345)
T ss_pred HHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecCCCeEEEccC-CCCeEEEEhHHHHH
Confidence 898888888899999999999877778999999999999999999999999975 6899999999 99999999999999
Q ss_pred HHhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh
Q 038676 226 AWTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE 292 (307)
Q Consensus 226 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~ 292 (307)
+||||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|++++||+..++..
T Consensus 262 ~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~ 328 (345)
T PLN02750 262 VWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRS 328 (345)
T ss_pred HHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhc
Confidence 9999999999999998888899999999999999999999999999999999999999999988874
No 7
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.9e-75 Score=540.24 Aligned_cols=283 Identities=21% Similarity=0.342 Sum_probs=249.4
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||||||+.+ ..++++|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||..
T Consensus 38 iPvIDls~~--~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~ 115 (358)
T PLN02515 38 IPVISLAGI--DEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIV 115 (358)
T ss_pred CCEEEChhc--cCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCccc
Confidence 799999984 334456788999999999999999999999999999999999999999999999998754 34579863
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
... ..|++|.|.+...... ....|.||+.+++||+.+++|+++|.+|+..||++|+++||++ ++|.+.+.
T Consensus 116 ~~~~~~~~~~d~kE~~~~~~~~~~----~~~~n~WP~~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~ 191 (358)
T PLN02515 116 SSHLQGEAVQDWREIVTYFSYPVR----TRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGLEKEALTKACV 191 (358)
T ss_pred ccccccccccCceeeeccccCccc----ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhc
Confidence 221 2478998865321110 1124789998899999999999999999999999999999999 78887777
Q ss_pred CcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCC-ceEEcCCCCCCeEEEEchhHHHHHhcCcc
Q 038676 154 STSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNG-EWINVKPSSPHSFIAMIGDSLYAWTNGQL 232 (307)
Q Consensus 154 ~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g-~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ 232 (307)
...+.+|++|||+++.++..+|+++|||+|+||||+||+++||||+.++| +|++|+| .||++|||+||+||+||||+|
T Consensus 192 ~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~~Wi~Vpp-~pgalVVNiGD~L~~~TNG~~ 270 (358)
T PLN02515 192 DMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQP-VEGAFVVNLGDHGHYLSNGRF 270 (358)
T ss_pred CccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCCeEEECCC-CCCeEEEEccHHHHHHhCCee
Confidence 77788999999999887788999999999999999999999999987665 7999999 999999999999999999999
Q ss_pred cCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHH
Q 038676 233 YSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYT 291 (307)
Q Consensus 233 ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~ 291 (307)
|||+|||+.++..+||||+||++|+.|++|.|++ ++.+++|++|+++||+||+..++.
T Consensus 271 kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~ 328 (358)
T PLN02515 271 KNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRRKMS 328 (358)
T ss_pred eeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHh
Confidence 9999999988778999999999999999999997 666778999999999999999987
No 8
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.4e-75 Score=536.13 Aligned_cols=284 Identities=24% Similarity=0.421 Sum_probs=248.8
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||+|||+. .++..++++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++......+||.+.
T Consensus 15 iP~IDl~~-------~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~ 87 (332)
T PLN03002 15 LNCIDLAN-------DDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPV 87 (332)
T ss_pred CCEEeCCc-------hhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCcc
Confidence 79999984 12456899999999999999999999999999999999999999999999999766668999865
Q ss_pred CC---------CCCceeeeccCCC--CchhH--HhhhccCCCCCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 038676 81 YP---------QVPLYESMGIDDA--NVKEK--VESMTNILWPEG--NKSFCKTIQSFSEQVSELDQTIRRMILESLGLE 145 (307)
Q Consensus 81 ~~---------~~d~~E~~~~~~~--~~~~~--~~~~~~~~wP~~--~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 145 (307)
+. ..|++|.|.++.. .+... ...+.+|.||+. .|+||+.+++|+++|.+|+..||++|+++||++
T Consensus 88 ~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 167 (332)
T PLN03002 88 LDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLD 167 (332)
T ss_pred cccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 32 1489999977632 11111 112457899984 689999999999999999999999999999999
Q ss_pred -hhhhh--hccCcccceeeeeecCCCCcc-cccccccccCCCceEEEeeCCCCceeEEcc----CCceEEcCCCCCCeEE
Q 038676 146 -KYMDE--HMNSTSYLLRVMKYKGPETTE-KKLGLNAHTDKNIVTILYQNQVEGLELQTK----NGEWINVKPSSPHSFI 217 (307)
Q Consensus 146 -~~~~~--~~~~~~~~lr~~~Yp~~~~~~-~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~----~g~W~~v~p~~~g~~v 217 (307)
++|++ ....+.+.||++||||++.++ ..+|+++|||+|+||||+||+++||||+.. +|+|++|+| +||++|
T Consensus 168 ~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp-~pg~~V 246 (332)
T PLN03002 168 VGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPP-IKGAFI 246 (332)
T ss_pred hHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCC-CCCeEE
Confidence 78875 455567899999999987654 578999999999999999999999999764 468999999 999999
Q ss_pred EEchhHHHHHhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHhh
Q 038676 218 AMIGDSLYAWTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTEA 293 (307)
Q Consensus 218 VnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~ 293 (307)
||+||+||+||||+||||+|||+.++ .+||||+||++|+.|++|.|+++++++++|++|++++++||+..+++..
T Consensus 247 VNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~ 321 (332)
T PLN03002 247 VNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEET 321 (332)
T ss_pred EEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999775 5799999999999999999999999999999999999999999998854
No 9
>PLN02997 flavonol synthase
Probab=100.00 E-value=3.5e-75 Score=532.41 Aligned_cols=280 Identities=24% Similarity=0.414 Sum_probs=247.9
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||||||+.. ++++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++......+||...
T Consensus 33 IPvIDls~~-------~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~ 105 (325)
T PLN02997 33 VPVVDLSVS-------DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRN 105 (325)
T ss_pred CCeEECCCC-------CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCcc
Confidence 799999862 2457899999999999999999999999999999999999999999999999766668899865
Q ss_pred CC--CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhccC--c
Q 038676 81 YP--QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMNS--T 155 (307)
Q Consensus 81 ~~--~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~--~ 155 (307)
.. ..+++|.+..... +.. ....|.||+.+|+||+++++|++.|.+|+.+|+++|+++||++ ++|.+.+.. .
T Consensus 106 ~~~~~~d~~e~~~~~~~--p~~--~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~ 181 (325)
T PLN02997 106 YLGGINNWDEHLFHRLS--PPS--IINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETA 181 (325)
T ss_pred cccCCCCccceeEeeec--Ccc--ccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcc
Confidence 32 2356776543211 001 1134789998899999999999999999999999999999999 788776653 3
Q ss_pred ccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcccCC
Q 038676 156 SYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSP 235 (307)
Q Consensus 156 ~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~ 235 (307)
.+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+||+||+||||+|||+
T Consensus 182 ~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p-~pgalvVNiGD~Le~~TNG~~kSt 259 (325)
T PLN02997 182 EYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAF-KDEQWLDLNY-INSAVVVIIGDQLMRMTNGRFKNV 259 (325)
T ss_pred cceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEe-ECCcEEECCC-CCCeEEEEechHHHHHhCCccccc
Confidence 45899999999988778899999999999999999999999997 5789999999 999999999999999999999999
Q ss_pred CceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHhh
Q 038676 236 YHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTEA 293 (307)
Q Consensus 236 ~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~ 293 (307)
+|||+.++..+|||++||++|+.|++|.|+++++++++|++|++++++||+..++++.
T Consensus 260 ~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~~ 317 (325)
T PLN02997 260 LHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRGW 317 (325)
T ss_pred cceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhhc
Confidence 9999988778899999999999999999999999999999999999999999998854
No 10
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=1.9e-75 Score=542.26 Aligned_cols=295 Identities=22% Similarity=0.362 Sum_probs=255.4
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC---CCCcc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK---PFHGY 77 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY 77 (307)
||||||+.+ ...+.+.|++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++.... ..+||
T Consensus 48 iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy 126 (360)
T PLN03178 48 VPVVDLSNI-ESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGY 126 (360)
T ss_pred CCEEEchhh-cCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCcccc
Confidence 799999985 23333457889999999999999999999999999999999999999999999999997642 47898
Q ss_pred cccCC-----CCCceeeeccCC-CCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhh
Q 038676 78 VGQYP-----QVPLYESMGIDD-ANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDE 150 (307)
Q Consensus 78 ~~~~~-----~~d~~E~~~~~~-~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~ 150 (307)
..... ..|++|.+.... +.. ...+|.||+.+|+||+.+++|+++|.+++..||++|+++||++ ++|.+
T Consensus 127 ~~~~~~~~~~~~d~~e~~~~~~~p~~-----~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 201 (360)
T PLN03178 127 GSKLAANASGQLEWEDYFFHLTLPED-----KRDPSLWPKTPPDYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLEK 201 (360)
T ss_pred ccccccccccccchhHhhccccCCcc-----ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 54321 135555543321 111 1235799999999999999999999999999999999999999 88887
Q ss_pred hcc---CcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHH
Q 038676 151 HMN---STSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAW 227 (307)
Q Consensus 151 ~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~ 227 (307)
.+. ...+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+||+||+|
T Consensus 202 ~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p-~pg~lvVNiGD~L~~~ 279 (360)
T PLN03178 202 EVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMVPGLQVL-YEGKWVTAKC-VPDSIVVHIGDTLEIL 279 (360)
T ss_pred HhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEeeCCCCceeEe-ECCEEEEcCC-CCCeEEEEccHHHHHH
Confidence 766 3457899999999988778899999999999999999999999997 5899999999 9999999999999999
Q ss_pred hcCcccCCCceeecCCCCceEEEEeecCCCCCce-eeCCCccCCCCCCCCCCCcCHHHHHHHHHH--hhcccchhhhhh
Q 038676 228 TNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYK-IEAPEELVDEEHPLLFKPFDHFEFLEFYYT--EAGQRAESALKT 303 (307)
Q Consensus 228 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~-i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~--~~~~~~~~~~~~ 303 (307)
|||+||||+|||+.++..+||||+||++|+.|++ +.|+++++++++|++|++++++||++.++. ..+++.++.++|
T Consensus 280 TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~~~~~~ 358 (360)
T PLN03178 280 SNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNIDAADI 358 (360)
T ss_pred hCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccCcchhHhHHhc
Confidence 9999999999999887788999999999999965 599999999999999999999999999888 347777887776
No 11
>PLN02485 oxidoreductase
Probab=100.00 E-value=3.6e-75 Score=535.59 Aligned_cols=291 Identities=24% Similarity=0.374 Sum_probs=251.1
Q ss_pred CCeeeCCCCCCC--C----CCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC--C
Q 038676 1 LPIIDFSKPNLK--P----GTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK--K 72 (307)
Q Consensus 1 iPvIDls~~~~~--~----~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~ 72 (307)
||||||+.+.-. + .++++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... .
T Consensus 8 iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~~ 87 (329)
T PLN02485 8 IPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMTPAA 87 (329)
T ss_pred CCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcccCCC
Confidence 799999985211 0 1234677899999999999999999999999999999999999999999999998754 3
Q ss_pred CCCcccccCC-----CCCceeeeccCCCCchh-----HHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 038676 73 PFHGYVGQYP-----QVPLYESMGIDDANVKE-----KVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESL 142 (307)
Q Consensus 73 ~~~GY~~~~~-----~~d~~E~~~~~~~~~~~-----~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~L 142 (307)
..+||.+.+. ..|++|.|.+....... ......+|.||+.+|+||+.+++|+++|.+++..||++|+++|
T Consensus 88 ~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a~~L 167 (329)
T PLN02485 88 GYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIALAL 167 (329)
T ss_pred CCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5789986543 24788988775321110 0112347899998899999999999999999999999999999
Q ss_pred CCC-hhhhhh-ccCcccceeeeeecCCCC----cccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCe
Q 038676 143 GLE-KYMDEH-MNSTSYLLRVMKYKGPET----TEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHS 215 (307)
Q Consensus 143 gl~-~~~~~~-~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~ 215 (307)
|++ ++|.+. ...+.+.||++|||+++. ++..+|+++|||+|+||||+|| +++||||+.++|+|++|+| .||+
T Consensus 168 gl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p-~pg~ 246 (329)
T PLN02485 168 GGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIP-IPGT 246 (329)
T ss_pred CCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCC-CCCc
Confidence 999 777554 455678899999999875 4568999999999999999997 5899999989999999999 9999
Q ss_pred EEEEchhHHHHHhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCC--CCCCCCCCCcCHHHHHHHHHHh
Q 038676 216 FIAMIGDSLYAWTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVD--EEHPLLFKPFDHFEFLEFYYTE 292 (307)
Q Consensus 216 ~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~--~~~p~~y~~~~~~e~~~~~~~~ 292 (307)
+|||+||+||+||||+||||+|||+.++..+||||+||++|+.|++|+|++++++ +++|++|+++|++||+.+++..
T Consensus 247 ~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 325 (329)
T PLN02485 247 FVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLT 325 (329)
T ss_pred EEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHHHH
Confidence 9999999999999999999999999887789999999999999999999999987 6789999999999999999874
No 12
>PLN02904 oxidoreductase
Probab=100.00 E-value=1.1e-74 Score=535.56 Aligned_cols=292 Identities=26% Similarity=0.383 Sum_probs=249.6
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC--CCCccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK--PFHGYV 78 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~GY~ 78 (307)
||+|||+.+ .+ .+.|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ...||.
T Consensus 52 iPvIDls~~--~~-~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g 128 (357)
T PLN02904 52 LPVIDLSLL--HD-PLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYG 128 (357)
T ss_pred CCEEECccc--CC-chhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCccccc
Confidence 799999974 22 3456789999999999999999999999999999999999999999999999986532 223442
Q ss_pred ccCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhc
Q 038676 79 GQYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHM 152 (307)
Q Consensus 79 ~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~ 152 (307)
.... ..+++|.+....... ....|.||+.+|+||+.+++|+++|.+|+..||++|+++||++ ++|.+.+
T Consensus 129 ~~~~~~~~~~~~~~d~~~~~~~p~-----~~~~n~WP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 203 (357)
T PLN02904 129 TSLNHSTDRVHYWRDFIKHYSHPL-----SKWINLWPSNPPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYLQEEI 203 (357)
T ss_pred ccccccCCCCCCceEEeeeccCCc-----ccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 2111 113444332211100 1125789998899999999999999999999999999999999 8888887
Q ss_pred cCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcc
Q 038676 153 NSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQL 232 (307)
Q Consensus 153 ~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ 232 (307)
....+.||++|||||+.++..+|+++|||+|+||||+|+ .+||||+.++|+|++|+| .||++|||+||+||+||||+|
T Consensus 204 ~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~g~Wi~V~p-~pgalVVNiGD~Le~~TNG~~ 281 (357)
T PLN02904 204 EEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGLQIMDCNKNWVCVPY-IEGALIVQLGDQVEVMSNGIY 281 (357)
T ss_pred cCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCeeeEEeCCCCEEECCC-CCCeEEEEccHHHHHHhCCee
Confidence 777789999999999887788999999999999999997 589999988999999999 999999999999999999999
Q ss_pred cCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhh
Q 038676 233 YSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALK 302 (307)
Q Consensus 233 ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~ 302 (307)
|||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+++||+||++.+++. .++..++.++
T Consensus 282 kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~ 353 (357)
T PLN02904 282 KSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFIDTLK 353 (357)
T ss_pred eccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcchHHHHhc
Confidence 999999998888899999999999999999999999999999999999999999999883 3555555444
No 13
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.6e-75 Score=535.22 Aligned_cols=291 Identities=25% Similarity=0.411 Sum_probs=249.9
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC---CCCCcc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK---KPFHGY 77 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~~GY 77 (307)
||+|||+.+ .+ +++++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ...+||
T Consensus 42 iPvIDls~~--~~--~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~ 117 (348)
T PLN02912 42 IPLIDLRDL--HG--PNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLS 117 (348)
T ss_pred CCeEECccc--CC--cCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCccccc
Confidence 799999974 22 33678899999999999999999999999999999999999999999999996432 123444
Q ss_pred cccCC----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhc
Q 038676 78 VGQYP----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHM 152 (307)
Q Consensus 78 ~~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~ 152 (307)
..... ..+++|.+.+..... ....|.||+.+++||+++++|+++|.+|+.+||++|+++||++ ++|++++
T Consensus 118 ~~~~~~~~~~~~~~e~~~~~~~~~-----~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~ 192 (348)
T PLN02912 118 TSFNVSKEKVSNWRDFLRLHCYPI-----EDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAISESLGLEKDRVSNTL 192 (348)
T ss_pred ccccccccccCCchheEEEeecCc-----ccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 43321 235666665431110 0125789999999999999999999999999999999999999 7888887
Q ss_pred cCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcc
Q 038676 153 NSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQL 232 (307)
Q Consensus 153 ~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ 232 (307)
....+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+||+||+||||+|
T Consensus 193 ~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p-~pgalvVNiGD~L~~~TNG~~ 270 (348)
T PLN02912 193 GKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVF-KDGKWIAVNP-IPNTFIVNLGDQMQVISNDKY 270 (348)
T ss_pred cCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEE-ECCcEEECCC-cCCeEEEEcCHHHHHHhCCEE
Confidence 77788999999999988777899999999999999999999999997 6899999999 999999999999999999999
Q ss_pred cCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCC--CCCCCCCcCHHHHHHHHHHh--hcccchhhhh
Q 038676 233 YSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEE--HPLLFKPFDHFEFLEFYYTE--AGQRAESALK 302 (307)
Q Consensus 233 ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~--~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~ 302 (307)
||++|||+.++..+|||++||++|+.|++|.|++++++++ +|++|++++|+||+..++.. .+...++.+|
T Consensus 271 kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~ 344 (348)
T PLN02912 271 KSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFK 344 (348)
T ss_pred EcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcchhhhhh
Confidence 9999999988778999999999999999999999999875 48999999999999999873 3555555554
No 14
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=8.9e-75 Score=537.80 Aligned_cols=295 Identities=28% Similarity=0.442 Sum_probs=254.2
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCccc-
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYV- 78 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~- 78 (307)
||+|||+.+ ...+.+.|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++||.
T Consensus 52 iPvIDls~l-~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~ 130 (362)
T PLN02393 52 IPVIDLSSL-FSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEGYGS 130 (362)
T ss_pred CCeEECccc-cCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCccccccc
Confidence 799999985 2333345788999999999999999999999999999999999999999999999999754 3578994
Q ss_pred ccCC----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 79 GQYP----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 79 ~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
..+. ..|++|.|.+..... ....+|.||+.+++|++.+++|+++|.+++..||++|+++||++ ++|.+.+.
T Consensus 131 ~~~~~~~~~~d~~e~~~~~~~~~----~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~ 206 (362)
T PLN02393 131 RLGVEKGAILDWSDYYFLHYLPS----SLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFG 206 (362)
T ss_pred ccccccccccCchhheeeeecCc----cccchhhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhC
Confidence 3221 246777765542110 11235789998899999999999999999999999999999999 78877765
Q ss_pred Cc---ccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhc
Q 038676 154 ST---SYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTN 229 (307)
Q Consensus 154 ~~---~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~Tn 229 (307)
.. .+.+|++|||+++.++..+|+++|||+|+||||+|+ +++||||+ ++|+|++|+| .||++|||+||+||+|||
T Consensus 207 ~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~W~~V~p-~pgalVVNiGD~l~~~Tn 284 (362)
T PLN02393 207 GEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVR-RDDAWITVKP-VPDAFIVNIGDQIQVLSN 284 (362)
T ss_pred CCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceee-ECCEEEECCC-CCCeEEEEcchhhHhhcC
Confidence 43 378999999999887788999999999999999985 68999997 7899999999 999999999999999999
Q ss_pred CcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhh
Q 038676 230 GQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALK 302 (307)
Q Consensus 230 G~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~ 302 (307)
|+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+++|++||+..+.+. .+...++.+|
T Consensus 285 g~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~ 359 (362)
T PLN02393 285 AIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLK 359 (362)
T ss_pred CeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHhhhc
Confidence 999999999998888899999999999999999999999999999999999999999877752 3544444444
No 15
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.2e-74 Score=537.29 Aligned_cols=292 Identities=25% Similarity=0.418 Sum_probs=251.6
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC--CCCCccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK--KPFHGYV 78 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~GY~ 78 (307)
||+|||+.+ .+ +++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ....||.
T Consensus 67 iPvIDls~l--~~--~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg 142 (374)
T PLN02947 67 LPVIDLAEL--RG--SNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYG 142 (374)
T ss_pred CCeEECccc--CC--ccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeec
Confidence 799999985 22 34678999999999999999999999999999999999999999999999998643 2345664
Q ss_pred ccC-----CCCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----hhhh
Q 038676 79 GQY-----PQVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE----KYMD 149 (307)
Q Consensus 79 ~~~-----~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~----~~~~ 149 (307)
... ...+++|.+.+..... .. ..|.||+.+++||+.+++|+++|.+|+.+||++|+++||++ ++|.
T Consensus 143 ~~~~~~~~~~~~~~e~~~~~~~p~----~~-~~~~WP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~ 217 (374)
T PLN02947 143 TSFNQNKDAVFCWRDFLKLVCHPL----SD-VLPHWPSSPADLRKVAATYAKATKRLFLELMEAILESLGIVKRGSDELL 217 (374)
T ss_pred cccccccccccCceeceeeecCCc----cc-ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHH
Confidence 221 1135666654331110 01 24689999999999999999999999999999999999996 3566
Q ss_pred hhccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhc
Q 038676 150 EHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTN 229 (307)
Q Consensus 150 ~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~Tn 229 (307)
+.+....+.+|++|||||++++..+|+++|||+|+||||+||+++||||+. +|+|++|+| +||++|||+||+||+|||
T Consensus 218 ~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~-~g~Wi~V~p-~pga~VVNvGD~Lq~~SN 295 (374)
T PLN02947 218 EEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGLQIMH-AGRWVTVEP-IPGSFVVNVGDHLEIFSN 295 (374)
T ss_pred HHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCeeEeE-CCEEEeCCC-CCCeEEEEeCceeeeeeC
Confidence 666667789999999999988889999999999999999999999999976 899999999 999999999999999999
Q ss_pred CcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh--hcccchhhhhh
Q 038676 230 GQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE--AGQRAESALKT 303 (307)
Q Consensus 230 G~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~--~~~~~~~~~~~ 303 (307)
|+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|++++|+||++.+.+. .|+..++.+|+
T Consensus 296 G~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 371 (374)
T PLN02947 296 GRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL 371 (374)
T ss_pred CEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence 999999999998888899999999999999999999999999999999999999999998873 46666666664
No 16
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.6e-74 Score=529.72 Aligned_cols=277 Identities=28% Similarity=0.483 Sum_probs=243.3
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC---CCCcc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK---PFHGY 77 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY 77 (307)
||+|||+.. ++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ..++|
T Consensus 38 iPvIDls~~-------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~ 110 (337)
T PLN02639 38 VPVIDLGSP-------DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLS 110 (337)
T ss_pred CCeEECCCc-------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCccccc
Confidence 799999862 36779999999999999999999999999999999999999999999999986432 23333
Q ss_pred cccCC----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhc
Q 038676 78 VGQYP----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHM 152 (307)
Q Consensus 78 ~~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~ 152 (307)
..... ..+++|.+.+..... ....|.||+.+++|++.+++|+++|.+|+.+||++|+++||++ ++|++.+
T Consensus 111 ~~~~~~~~~~~~~~e~~~~~~~p~-----~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 185 (337)
T PLN02639 111 TSFNVRKEKVHNWRDYLRLHCYPL-----DKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVL 185 (337)
T ss_pred cccccccCcccCchheEEeeecCC-----cccchhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 32221 134566655421100 1124789998899999999999999999999999999999999 8888888
Q ss_pred cCcccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 153 NSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 153 ~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
....+.+|++|||+++.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+| .||++|||+||+||+||||+
T Consensus 186 ~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p-~pg~lVVNiGD~L~~~TNG~ 263 (337)
T PLN02639 186 GEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVL-KDGKWVAVNP-HPGAFVINIGDQLQALSNGR 263 (337)
T ss_pred CCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEee-cCCeEEeccC-CCCeEEEechhHHHHHhCCe
Confidence 778889999999999887788999999999999999998 49999996 6899999999 99999999999999999999
Q ss_pred ccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHH
Q 038676 232 LYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYT 291 (307)
Q Consensus 232 ~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~ 291 (307)
||||+|||+.++..+|||++||++|+.|++|.|+++++++++|++|+|++++||++.++.
T Consensus 264 ~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~ 323 (337)
T PLN02639 264 YKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWS 323 (337)
T ss_pred eeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHh
Confidence 999999999887789999999999999999999999999999999999999999999987
No 17
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=3.8e-74 Score=525.14 Aligned_cols=290 Identities=24% Similarity=0.407 Sum_probs=250.6
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||+|||+.+ . ++++++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... .+||.+.
T Consensus 7 iPvIDls~~--~--~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~--~~gy~~~ 80 (321)
T PLN02299 7 FPVIDMEKL--N--GEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA--SKGLEGV 80 (321)
T ss_pred CCEEECcCC--C--cccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC--CCCcccc
Confidence 799999984 2 234677899999999999999999999999999999999999999999999997542 3677654
Q ss_pred CC---CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc---
Q 038676 81 YP---QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN--- 153 (307)
Q Consensus 81 ~~---~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~--- 153 (307)
.. ..|++|.|.+..... ...+.||+.+++||+.+++|++.|.+|+.+||++|+++||++ ++|++.+.
T Consensus 81 ~~~~~~~d~ke~~~~~~~~~------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~ 154 (321)
T PLN02299 81 QTEVEDLDWESTFFLRHLPE------SNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSK 154 (321)
T ss_pred cccCCCcCHHHHcccccCCc------cccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Confidence 32 347888887652111 123679998899999999999999999999999999999999 78877664
Q ss_pred CcccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcc
Q 038676 154 STSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQL 232 (307)
Q Consensus 154 ~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ 232 (307)
.+.+.||++||||++.++...|+++|||+|+||||+|| +++||||+ ++|+|++|+| .||++|||+||+||+||||+|
T Consensus 155 ~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p-~pg~lvVNiGD~l~~~Tng~~ 232 (321)
T PLN02299 155 GPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPP-MRHSIVVNLGDQLEVITNGKY 232 (321)
T ss_pred CccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcc-cCCeEEECCC-CCCeEEEEeCHHHHHHhCCce
Confidence 24567999999999887778899999999999999997 59999996 7899999999 999999999999999999999
Q ss_pred cCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCC--CCCCCCCcCHHHHHHHHHHhh--cc-cchhhhhhh
Q 038676 233 YSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEE--HPLLFKPFDHFEFLEFYYTEA--GQ-RAESALKTY 304 (307)
Q Consensus 233 ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~--~p~~y~~~~~~e~~~~~~~~~--~~-~~~~~~~~~ 304 (307)
||+.|||+.++..+||||+||++|+.|++|.|++++++++ +|++|+|++++||++.+++.. ++ ..++.++++
T Consensus 233 kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~ 309 (321)
T PLN02299 233 KSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAM 309 (321)
T ss_pred ecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhcc
Confidence 9999999988778999999999999999999999999865 589999999999999999842 32 345566554
No 18
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=1.4e-73 Score=517.86 Aligned_cols=276 Identities=30% Similarity=0.515 Sum_probs=241.4
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||||||+.+ . +.+++|.+||++||||||+||||+.++++++++++++||+||.|+|+++......+||.+.
T Consensus 6 iPvIDls~~--~-------~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~ 76 (300)
T PLN02365 6 IPTIDLEEF--P-------GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAP 76 (300)
T ss_pred CCEEEChhh--H-------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCc
Confidence 799999974 1 2458999999999999999999999999999999999999999999997654456899887
Q ss_pred CCCCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C-hhhhhhccCcccc
Q 038676 81 YPQVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGL-E-KYMDEHMNSTSYL 158 (307)
Q Consensus 81 ~~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl-~-~~~~~~~~~~~~~ 158 (307)
+...+++|.+.+.+.........+ ++.| ..+|+||+.+++|+++|.+|+..|+++|+++||+ + ++|++. .+.
T Consensus 77 ~~~~~~~e~~~~~~~~~~~~~~~~-~~~~-~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~----~~~ 150 (300)
T PLN02365 77 SEVNPLYEALGLYDMASPQAVDTF-CSQL-DASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW----PSQ 150 (300)
T ss_pred CCCCCchhheecccccCchhhhhc-cccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc----ccc
Confidence 666678898877632211111111 1223 3468899999999999999999999999999999 6 677653 478
Q ss_pred eeeeeecCCCCcccccccccccCCCceEEEeeCC-CCceeEEcc-CCceEEcCCCCCCeEEEEchhHHHHHhcCcccCCC
Q 038676 159 LRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQ-VEGLELQTK-NGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPY 236 (307)
Q Consensus 159 lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~-~~GLqv~~~-~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~ 236 (307)
||++|||+++.++...|+++|||+|+||||+||+ ++||||+.+ +|+|++|+| .||++|||+||+||+||||+||||+
T Consensus 151 lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p-~pga~vVNiGD~l~~~TNG~~~St~ 229 (300)
T PLN02365 151 FRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDP-LPGTLLVNLGDVATAWSNGRLCNVK 229 (300)
T ss_pred eeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCC-CCCeEEEEhhHHHHHHhCCceeccc
Confidence 9999999998877889999999999999999984 999999887 789999999 9999999999999999999999999
Q ss_pred ceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh
Q 038676 237 HRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE 292 (307)
Q Consensus 237 HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~ 292 (307)
|||+.++..+||||+||+.|+.|++|.|+++++++++|++|++++++||+..+...
T Consensus 230 HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~ 285 (300)
T PLN02365 230 HRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLST 285 (300)
T ss_pred ceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhc
Confidence 99998877899999999999999999999999999999999999999999999873
No 19
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.7e-73 Score=526.27 Aligned_cols=290 Identities=24% Similarity=0.408 Sum_probs=246.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCC-CCCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISK-KPFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~ 79 (307)
||+|||+.+ + ++++.+++.+++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++... ...+||..
T Consensus 45 IPvIDls~~-~-~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~ 122 (348)
T PLN00417 45 IPAIDLSLL-L-SSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGYGN 122 (348)
T ss_pred CCeEEChhh-c-CCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcccccc
Confidence 799999985 3 33333445679999999999999999999999999999999999999999999999765 35789965
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
... ..+++|.+.+...... ....|.||+.+++||+.+++|+.+|.+|+..||++|+++||++ ++|.+.+.
T Consensus 123 ~~~~~~~~~~d~~e~~~~~~~p~~----~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~~~~~ 198 (348)
T PLN00417 123 DMILSDDQVLDWIDRLYLTTYPED----QRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFKAMARSLELEENCFLEMYG 198 (348)
T ss_pred ccccccCCCcCccceeecccCCcc----cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc
Confidence 321 2356676654321110 1235789998899999999999999999999999999999999 78877665
Q ss_pred C-cccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 154 S-TSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 154 ~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
. ..+.||++||||++.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+| .||++|||+||+||+||||+
T Consensus 199 ~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p-~pg~lVVNiGD~Le~~Tng~ 276 (348)
T PLN00417 199 ENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFL-KDGKWYKAPI-VPDTILINVGDQMEIMSNGI 276 (348)
T ss_pred cCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEe-ECCeEEECCC-CCCcEEEEcChHHHHHhCCe
Confidence 4 3467999999999887778999999999999999997 69999996 7899999999 99999999999999999999
Q ss_pred ccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHhhcccch
Q 038676 232 LYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTEAGQRAE 298 (307)
Q Consensus 232 ~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~~~~~~ 298 (307)
|||++|||+.++..+|||++||++|+.|++|+|+++++++++|++|+++|.++....+....+++.+
T Consensus 277 ~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~~~~~~~~~~~~~~~ 343 (348)
T PLN00417 277 YKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYVELFFKYYQQGRRPI 343 (348)
T ss_pred ecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHHHHHHHHHhcCcchh
Confidence 9999999998877899999999999999999999999999999999999966655555554455443
No 20
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=2e-73 Score=522.08 Aligned_cols=278 Identities=24% Similarity=0.429 Sum_probs=242.7
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||||||+.. +..++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ..+||...
T Consensus 27 iPvIDls~~----------~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~Gy~~~ 95 (335)
T PLN02156 27 IPVIDLTDS----------DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFGYGTK 95 (335)
T ss_pred CCcccCCCh----------HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcccCcc
Confidence 799999741 2467899999999999999999999999999999999999999999998654 34588432
Q ss_pred C--C--CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--hhhhhhcc-
Q 038676 81 Y--P--QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE--KYMDEHMN- 153 (307)
Q Consensus 81 ~--~--~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~--~~~~~~~~- 153 (307)
. . ..+++|.+.+...... ......|.||+.+++||+.+++|+++|.+|+.+|+++|+++||++ ++|++++.
T Consensus 96 ~~~~~~~~~~~e~~~~~~~~~~--~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~ 173 (335)
T PLN02156 96 RIGPNGDVGWLEYILLNANLCL--ESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKV 173 (335)
T ss_pred ccCCCCCCCceeeEeeecCCcc--ccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcC
Confidence 1 1 2468888877532211 111236789998899999999999999999999999999999996 47877664
Q ss_pred -CcccceeeeeecCCCCc--ccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcC
Q 038676 154 -STSYLLRVMKYKGPETT--EKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNG 230 (307)
Q Consensus 154 -~~~~~lr~~~Yp~~~~~--~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG 230 (307)
...+.||++|||+++.. +..+|+++|||+|+||||+||+++||||+.++|+|++|+| .||++|||+||+||+||||
T Consensus 174 ~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp-~pga~VVNiGD~l~~wTNg 252 (335)
T PLN02156 174 KESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPP-DHSSFFVLVGDTLQVMTNG 252 (335)
T ss_pred CCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccC-CCCcEEEEhHHHHHHHhCC
Confidence 34578999999999752 3579999999999999999999999999888999999999 9999999999999999999
Q ss_pred cccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHh
Q 038676 231 QLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTE 292 (307)
Q Consensus 231 ~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~ 292 (307)
+||||.|||+.+...+||||+||++|+.|++|.|+++++++++|++|++++++||+..+++.
T Consensus 253 ~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~ 314 (335)
T PLN02156 253 RFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKT 314 (335)
T ss_pred eeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhc
Confidence 99999999998877899999999999999999999999999999999999999999999974
No 21
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1.5e-73 Score=498.28 Aligned_cols=288 Identities=24% Similarity=0.394 Sum_probs=253.0
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC--CCCccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK--PFHGYV 78 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~GY~ 78 (307)
||+|||+.+ ..+++.++..++++|++||+++|||||+||||+..+++++++++++||+||.|+|+++.+.. ..+||.
T Consensus 6 lp~idls~~-~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rGY~ 84 (322)
T COG3491 6 LPIIDLSEL-AGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRGYT 84 (322)
T ss_pred CceeccHHh-cCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccccc
Confidence 799999985 34444578999999999999999999999999999999999999999999999999998653 689998
Q ss_pred ccCC-----CCCceeeeccCCCCc------hhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-h
Q 038676 79 GQYP-----QVPLYESMGIDDANV------KEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-K 146 (307)
Q Consensus 79 ~~~~-----~~d~~E~~~~~~~~~------~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 146 (307)
+.+. ..|++|.+.++..-+ .......++|+|| ..|+||+.+..|+++|.+++.+||++||.+|+|+ +
T Consensus 85 ~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL~~d 163 (322)
T COG3491 85 PHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLRDALLQYYRAMTAVGLRLLRAIALGLDLPED 163 (322)
T ss_pred cCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Confidence 8764 348899998874432 1222345789999 7999999999999999999999999999999999 7
Q ss_pred hhhhhccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHH
Q 038676 147 YMDEHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYA 226 (307)
Q Consensus 147 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~ 226 (307)
+|+..+.++.+.||++|||+.+..++..+.++|||+|+||||+||.++||||++++|+|++|+| +||++|||+|||||+
T Consensus 164 ~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P-~pgtlvVNiGdmLe~ 242 (322)
T COG3491 164 FFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPP-IPGTLVVNIGDMLER 242 (322)
T ss_pred hhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCC-CCCeEEEeHHHHHHH
Confidence 8988889999999999999998888888899999999999999999999999999899999999 999999999999999
Q ss_pred HhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCC-ccCCCCCCCCCCCc-----CHHHHHHHHHH
Q 038676 227 WTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPE-ELVDEEHPLLFKPF-----DHFEFLEFYYT 291 (307)
Q Consensus 227 ~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~-~~~~~~~p~~y~~~-----~~~e~~~~~~~ 291 (307)
||||+||||+|||+.++..+||||+||+.|+.|+.|.|+. .+.+..+++++.+- -..+|-.+.++
T Consensus 243 ~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t~~~n~l~r~~~~n~~~ 313 (322)
T COG3491 243 WTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGTDPDNPLLRDYATNFLK 313 (322)
T ss_pred HhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCCCCCCchHHHHHHHHHHH
Confidence 9999999999999999888999999999999999999865 44555677777775 33444444444
No 22
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.8e-73 Score=524.71 Aligned_cols=277 Identities=23% Similarity=0.423 Sum_probs=242.3
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC---CCCcc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK---PFHGY 77 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~GY 77 (307)
||+|||+.. ++++++++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++.... .++||
T Consensus 43 iPvIDls~~-------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy 115 (335)
T PLN02704 43 VPTIDLSDP-------DEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGY 115 (335)
T ss_pred CCeEECCCc-------cHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCcccccc
Confidence 799999862 24568999999999999999999999999999999999999999999999997542 46888
Q ss_pred cccCC-----CCCceeeeccC-CCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhh
Q 038676 78 VGQYP-----QVPLYESMGID-DANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDE 150 (307)
Q Consensus 78 ~~~~~-----~~d~~E~~~~~-~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~ 150 (307)
..... ..+++|.+... .+.. ....|.||+.+|+||+.+++|+++|.+|+.+||++|+++||++ ++|.+
T Consensus 116 ~~~~~~~~~~~~~~~d~~~~~~~p~~-----~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 190 (335)
T PLN02704 116 GTKLQKEPEGKKAWVDHLFHRIWPPS-----AINYQFWPKNPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLEEDELKE 190 (335)
T ss_pred cccccccccCcccceeeeEeeecCCc-----ccchhhCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 65421 12344544221 1100 1124689998899999999999999999999999999999999 78877
Q ss_pred hccC--cccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHh
Q 038676 151 HMNS--TSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWT 228 (307)
Q Consensus 151 ~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~T 228 (307)
.+.. ..+.+|++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+||+||+||
T Consensus 191 ~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p-~pg~lvVNvGD~L~~~T 268 (335)
T PLN02704 191 AVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVF-RDDHWFDVKY-IPNALVIHIGDQIEILS 268 (335)
T ss_pred HhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCCceeEe-ECCEEEeCCC-CCCeEEEEechHHHHHh
Confidence 6653 346899999999988778899999999999999999999999996 6899999999 99999999999999999
Q ss_pred cCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHH
Q 038676 229 NGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYT 291 (307)
Q Consensus 229 nG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~ 291 (307)
||+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|+++|++||+..++.
T Consensus 269 Ng~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 269 NGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred CCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 999999999999888889999999999999999999999999999999999999999998886
No 23
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=8.2e-73 Score=514.91 Aligned_cols=285 Identities=36% Similarity=0.654 Sum_probs=249.9
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC-CCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK-PFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 79 (307)
||+|||+.+ ...++.+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.... ...||..
T Consensus 18 iPvIDls~~--~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~gY~~ 95 (322)
T KOG0143|consen 18 IPVIDLSCL--DSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRGYGT 95 (322)
T ss_pred cCeEECCCC--CCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcccccc
Confidence 799999974 2222257788999999999999999999999999999999999999999999999998775 6788875
Q ss_pred cCC-----CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc
Q 038676 80 QYP-----QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN 153 (307)
Q Consensus 80 ~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~ 153 (307)
... ..+|.+.+....... ..+..+.||+.++.||+++++|.+++.+|+..|+++|+++||++ +++.+.++
T Consensus 96 ~~~~~~~~~~~w~d~~~~~~~p~----~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~ 171 (322)
T KOG0143|consen 96 SFILSPLKELDWRDYLTLLSAPE----SSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFG 171 (322)
T ss_pred cccccccccccchhheeeeccCc----cccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhC
Confidence 432 223444443221110 01456789999999999999999999999999999999999999 67777776
Q ss_pred C-cccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 154 S-TSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 154 ~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
. ..+.||+++||||++++..+|+++|||.++||+|+|| +++||||..++|+|++|+| .||++|||+||+||+||||+
T Consensus 172 ~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P-~p~a~vVNiGD~l~~lSNG~ 250 (322)
T KOG0143|consen 172 ETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPP-IPGAFVVNIGDMLQILSNGR 250 (322)
T ss_pred CccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCC-CCCCEEEEcccHHhHhhCCc
Confidence 6 4669999999999999999999999999999999998 8999999767899999999 99999999999999999999
Q ss_pred ccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHHhh
Q 038676 232 LYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYTEA 293 (307)
Q Consensus 232 ~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~ 293 (307)
|||+.|||++++.++|+|+|+|+.|+.|++|.|++++++++ |++|+++++.+|++.+.+..
T Consensus 251 ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~ 311 (322)
T KOG0143|consen 251 YKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKK 311 (322)
T ss_pred ccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHHHhcc
Confidence 99999999999888899999999999999999999998877 88899999999999999843
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=5.4e-70 Score=493.34 Aligned_cols=283 Identities=24% Similarity=0.375 Sum_probs=236.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC-CCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK-PFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 79 (307)
||+|||+.+ .. +++++++++|.+||++||||||+|||||.++++++++.+++||+||.|+|. +.... ....+.+
T Consensus 3 iPvIDls~~--~~--~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~-~~~~~~~~~~~~~ 77 (303)
T PLN02403 3 IPVIDFDQL--DG--EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESF-YESEIAKALDNEG 77 (303)
T ss_pred CCeEeCccC--Cc--ccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHh-hcccccCcccccC
Confidence 799999974 22 346789999999999999999999999999999999999999999999996 22111 1111112
Q ss_pred cCCCCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhcc---Cc
Q 038676 80 QYPQVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMN---ST 155 (307)
Q Consensus 80 ~~~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~---~~ 155 (307)
.....|++|.|.+..... ...|.||+.+|+||+.+++|+++|.+|+..|+++++++||++ ++|.+.+. .+
T Consensus 78 ~~~~~d~kE~~~~~~~p~------~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 151 (303)
T PLN02403 78 KTSDVDWESSFFIWHRPT------SNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGP 151 (303)
T ss_pred CCCCccHhhhcccccCCc------cchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCc
Confidence 223458999998753111 124689988899999999999999999999999999999999 78877665 33
Q ss_pred ccceeeeeecCCCCcccccccccccCCCceEEEeeC-CCCceeEEccCCceEEcCCCCC-CeEEEEchhHHHHHhcCccc
Q 038676 156 SYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQN-QVEGLELQTKNGEWINVKPSSP-HSFIAMIGDSLYAWTNGQLY 233 (307)
Q Consensus 156 ~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~~-g~~vVnvGd~l~~~TnG~~k 233 (307)
.+.+|++|||+++.++...|+++|||+|+||||+|+ .++|||| .++|+|++|+| .| |++|||+||+||+||||+||
T Consensus 152 ~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV-~~~g~Wi~V~p-~p~~~lvVNvGD~L~~~Tng~~~ 229 (303)
T PLN02403 152 SVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEF-LKDGKWVPIPP-SKNNTIFVNTGDQLEVLSNGRYK 229 (303)
T ss_pred cceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEe-ccCCeEEECCC-CCCCEEEEEehHHHHHHhCCeee
Confidence 456999999999877777899999999999999997 4999999 47899999999 99 69999999999999999999
Q ss_pred CCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCC-CcCHHHHHHHHHH---hhcccchhhhhh
Q 038676 234 SPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFK-PFDHFEFLEFYYT---EAGQRAESALKT 303 (307)
Q Consensus 234 s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~-~~~~~e~~~~~~~---~~~~~~~~~~~~ 303 (307)
|++|||+.++..+|||++||++|+.|++|.|+++++ |+ ++|++||++.+.+ ..++..++.+++
T Consensus 230 S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~-------~~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~ 296 (303)
T PLN02403 230 STLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLL-------YPSNYRFQDYLKLYSTTKFGDKGPRFESMKK 296 (303)
T ss_pred cccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhC-------CCCCccHHHHHHHHHHhccccccchHHHhhh
Confidence 999999988778899999999999999999999875 34 4999999998886 224444555554
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.8e-69 Score=492.80 Aligned_cols=265 Identities=25% Similarity=0.425 Sum_probs=224.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCC----CCc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKP----FHG 76 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~----~~G 76 (307)
||+|||+.+ .+++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++..... ..|
T Consensus 39 IPvIDls~~-----------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g 107 (341)
T PLN02984 39 IPVIDMECL-----------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWG 107 (341)
T ss_pred CCeEeCcHH-----------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccC
Confidence 799999863 35799999999999999999999999999999999999999999999852211 223
Q ss_pred ccccCC------------CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 038676 77 YVGQYP------------QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCKTIQSFSEQVSELDQTIRRMILESLGL 144 (307)
Q Consensus 77 Y~~~~~------------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl 144 (307)
|..... ..|++|.|.++..... ..... ++ +|...|+||+++++|+++|.+|+..||++||++||+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~-~~~~~-p~-~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl 184 (341)
T PLN02984 108 TPALTPSGKALSRGPQESNVNWVEGFNIPLSSLS-LLQTL-SC-SDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTLSL 184 (341)
T ss_pred cccccccccccccccccCCCCeeeEEeCcCCchh-hhhhc-CC-CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 321110 2478999988643211 11011 11 123468999999999999999999999999999999
Q ss_pred C--h-hhhhhccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEch
Q 038676 145 E--K-YMDEHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIG 221 (307)
Q Consensus 145 ~--~-~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvG 221 (307)
+ + +|.+++..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+|
T Consensus 185 ~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~-~~g~Wv~V~p-~pgalVVNiG 262 (341)
T PLN02984 185 ELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVM-KDGEWFNVKP-IANTLVVNLG 262 (341)
T ss_pred CcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEe-eCCceEECCC-CCCeEEEECC
Confidence 8 4 67888887888999999999987777899999999999999999999999996 6899999999 9999999999
Q ss_pred hHHHHHhcCcccCCCceee-cCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCCCCcCHHHHHHHHHH
Q 038676 222 DSLYAWTNGQLYSPYHRVM-MTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLFKPFDHFEFLEFYYT 291 (307)
Q Consensus 222 d~l~~~TnG~~ks~~HRV~-~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~ 291 (307)
|+||+||||+||||+|||+ .++..+|||++||++|+.|++|. |++|+|+|++||+..++.
T Consensus 263 D~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~----------p~~y~p~t~~e~l~~~~~ 323 (341)
T PLN02984 263 DMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIK----------SSKYKPFTYSDFEAQVQL 323 (341)
T ss_pred hhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEc----------cCCcCcccHHHHHHHHHh
Confidence 9999999999999999996 45567899999999999999996 368999999999999886
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2e-62 Score=435.34 Aligned_cols=244 Identities=24% Similarity=0.369 Sum_probs=213.1
Q ss_pred HHHHHHHHhC-CChHhhhhccCCC---CCCcccccCC-------CCCceeeeccCCCCchhHHhhhccCCCCCCChhhHH
Q 038676 50 VFGALEELFD-LPLRTKMRNISKK---PFHGYVGQYP-------QVPLYESMGIDDANVKEKVESMTNILWPEGNKSFCK 118 (307)
Q Consensus 50 ~~~~~~~fF~-lp~e~K~~~~~~~---~~~GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~ 118 (307)
+.+.+++||+ ||.|+|+++.... ..+||..... ..|++|.|.+..... ....+|.||+.+|+|++
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~p~----~~~~~n~wP~~~~~f~~ 76 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPL----SRRNPSHWPDFPPDYRE 76 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeecCc----cccchhhCCCCcHHHHH
Confidence 3568999997 9999999997653 4689943221 237899987742110 01235889998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhhhhccCcccceeeeeecCCCCcccccccccccCCCceEEEeeCCCCcee
Q 038676 119 TIQSFSEQVSELDQTIRRMILESLGLE-KYMDEHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKNIVTILYQNQVEGLE 197 (307)
Q Consensus 119 ~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLq 197 (307)
.+++|+++|.+|+.+|+++|+++||++ ++|++++....+.+|++||||++.++..+|+++|||+|+||||+||+++|||
T Consensus 77 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLq 156 (262)
T PLN03001 77 VVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGLQ 156 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCceE
Confidence 999999999999999999999999999 8888888777788999999999888889999999999999999999999999
Q ss_pred EEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCCCCceEEEEeecCCCCCceeeCCCccCCCCCCCCC
Q 038676 198 LQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTGIETRYSTGFFSIPKAGYKIEAPEELVDEEHPLLF 277 (307)
Q Consensus 198 v~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y 277 (307)
|+ ++|+|++|+| .||++||||||+||+||||+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|
T Consensus 157 V~-~~g~Wi~V~p-~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~y 234 (262)
T PLN03001 157 LL-KDAEWLMVPP-ISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRY 234 (262)
T ss_pred Ee-eCCeEEECCC-CCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCcC
Confidence 96 6889999999 999999999999999999999999999999878899999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHH--hhcccchh
Q 038676 278 KPFDHFEFLEFYYT--EAGQRAES 299 (307)
Q Consensus 278 ~~~~~~e~~~~~~~--~~~~~~~~ 299 (307)
++++++||+..++. ..++.+.+
T Consensus 235 ~~~~~~e~l~~~~~~~~~~~~~~~ 258 (262)
T PLN03001 235 CEIVYGEYVSSWYSKGPEGKRNID 258 (262)
T ss_pred CCccHHHHHHHHHHhccCCcchhh
Confidence 99999999998888 33554443
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.93 E-value=9.5e-26 Score=171.67 Aligned_cols=95 Identities=39% Similarity=0.707 Sum_probs=74.8
Q ss_pred cceeeeeecCCCCcccccccccccCC--CceEEEeeCCCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcccC
Q 038676 157 YLLRVMKYKGPETTEKKLGLNAHTDK--NIVTILYQNQVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYS 234 (307)
Q Consensus 157 ~~lr~~~Yp~~~~~~~~~~~~~HtD~--~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks 234 (307)
+.||+++|++ ++...++++|+|. +++|+|+|++++|||++..+ +|+.|++ .++.++||+||+|++||||.++|
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~-~~~~v~~-~~~~~~v~~G~~l~~~t~g~~~~ 76 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDG-EWVDVPP-PPGGFIVNFGDALEILTNGRYPA 76 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETT-EEEE-----TTCEEEEEBHHHHHHTTTSS--
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccc-cccCccC-ccceeeeeceeeeecccCCccCC
Confidence 5699999998 5667899999999 99999999999999996644 8999999 99999999999999999999999
Q ss_pred CCceeecCCCCceEEEEeecCC
Q 038676 235 PYHRVMMTGIETRYSTGFFSIP 256 (307)
Q Consensus 235 ~~HRV~~~~~~~R~Si~~F~~P 256 (307)
+.|||+.+....|+|++||++|
T Consensus 77 ~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 77 TLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp --EEEE--STS-EEEEEEEEE-
T ss_pred ceeeeEcCCCCCEEEEEEEECC
Confidence 9999999888999999999987
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.90 E-value=2.2e-24 Score=169.23 Aligned_cols=107 Identities=26% Similarity=0.486 Sum_probs=86.0
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCCCCCccccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKKPFHGYVGQ 80 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~ 80 (307)
||||||+. ..++|.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++..++..+||.+.
T Consensus 1 iPvIDls~-----~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~ 75 (116)
T PF14226_consen 1 IPVIDLSP-----DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPP 75 (116)
T ss_dssp --EEEHGG-----CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEES
T ss_pred CCeEECCC-----CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccC
Confidence 89999986 2356889999999999999999999999999999999999999999999999999777789999875
Q ss_pred CC------CCCceeeeccCCCCc---hhHHhhhccCCCCCC
Q 038676 81 YP------QVPLYESMGIDDANV---KEKVESMTNILWPEG 112 (307)
Q Consensus 81 ~~------~~d~~E~~~~~~~~~---~~~~~~~~~~~wP~~ 112 (307)
+. ..|++|+|.+..... +.......+|+||++
T Consensus 76 ~~~~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 76 GSESTDGGKPDWKESFNIGPDLPEDDPAYPPLYGPNIWPDE 116 (116)
T ss_dssp EEECCTTCCCCSEEEEEEECC-STTCHHTGCTS-GGGS-TT
T ss_pred CccccCCCCCCceEEeEEECCCCccccccccccCCCCCCCC
Confidence 32 468999999875522 122334678899973
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.80 E-value=1.8e-19 Score=141.42 Aligned_cols=77 Identities=19% Similarity=0.362 Sum_probs=67.3
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhccCCC-CCCcccc
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPLRTKMRNISKK-PFHGYVG 79 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~GY~~ 79 (307)
||||||+.+ ..+++.+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...+ ...||..
T Consensus 38 iPvIDls~~--~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy~~ 115 (120)
T PLN03176 38 IPVISIAGI--DDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGFIV 115 (120)
T ss_pred CCeEECccc--cCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCcch
Confidence 799999985 3444557789999999999999999999999999999999999999999999999997653 4568843
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.98 E-value=0.00079 Score=50.70 Aligned_cols=79 Identities=23% Similarity=0.275 Sum_probs=54.9
Q ss_pred eeeeeecCCCCcccccccccccCC-----CceEEEee--CC-----CCceeEEc---cCCceEEcC-----CCCCCeEEE
Q 038676 159 LRVMKYKGPETTEKKLGLNAHTDK-----NIVTILYQ--NQ-----VEGLELQT---KNGEWINVK-----PSSPHSFIA 218 (307)
Q Consensus 159 lr~~~Yp~~~~~~~~~~~~~HtD~-----~~lTlL~q--d~-----~~GLqv~~---~~g~W~~v~-----p~~~g~~vV 218 (307)
|++++|++. -.+.+|+|. ..+|+|+. +. .+.|++.. .++....+. | .+|.+|+
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p-~~g~~v~ 73 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVP-KPGRLVI 73 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE--BTTEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccC-CCCEEEE
Confidence 467788543 357899999 48888843 22 35688865 245566666 8 9999998
Q ss_pred EchhHHHHHhcCcccCCCceeecC-CCCceEEEEeecC
Q 038676 219 MIGDSLYAWTNGQLYSPYHRVMMT-GIETRYSTGFFSI 255 (307)
Q Consensus 219 nvGd~l~~~TnG~~ks~~HRV~~~-~~~~R~Si~~F~~ 255 (307)
.-+ ...+|+|... ....|+++.+|++
T Consensus 74 F~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 74 FPS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp EES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred EeC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 876 4579999877 6789999999874
No 31
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=95.99 E-value=0.087 Score=45.92 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=39.0
Q ss_pred CCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCCCCceEEEEeecC
Q 038676 193 VEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTGIETRYSTGFFSI 255 (307)
Q Consensus 193 ~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 255 (307)
.|.|.+.+..|. ..|+| ..|.+|+.-. +.+|+|.......||++.+..+
T Consensus 129 GGEl~~~~~~g~-~~Vkp-~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGE-HRVKL-PAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCc-EEEec-CCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 456888766564 67889 8999999875 4799998767789999999765
No 32
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.51 E-value=0.16 Score=42.32 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHcCCChhhhhhccCcccceeeeeecCCCCcccccccccccCCC--------ceEEEee--C--CCCcee
Q 038676 130 LDQTIRRMILESLGLEKYMDEHMNSTSYLLRVMKYKGPETTEKKLGLNAHTDKN--------IVTILYQ--N--QVEGLE 197 (307)
Q Consensus 130 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~q--d--~~~GLq 197 (307)
+...|.+.+...++++.. .......+++.+|.+. -...+|.|.. .+|+++. + ..|.|.
T Consensus 60 ~~~~l~~~i~~~~~~~~~----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~ 129 (178)
T smart00702 60 VIERIRQRLADFLGLLRG----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELV 129 (178)
T ss_pred HHHHHHHHHHHHHCCCch----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEE
Confidence 444455556666666521 1123346888999763 2467899966 5888765 3 234477
Q ss_pred EEccCC-ceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCCCCceEEEEeecC
Q 038676 198 LQTKNG-EWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTGIETRYSTGFFSI 255 (307)
Q Consensus 198 v~~~~g-~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 255 (307)
+...+. .-..|.| .+|.+|+.-... +.++|.|.......|+++..+++
T Consensus 130 f~~~~~~~~~~v~P-~~G~~v~f~~~~---------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 130 FPGLGLMVCATVKP-KKGDLLFFPSGR---------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred ecCCCCccceEEeC-CCCcEEEEeCCC---------CCccccCCcceeCCEEEEEEEEC
Confidence 643331 2568999 999888854220 16789998766679999998764
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=93.60 E-value=0.23 Score=41.47 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=47.5
Q ss_pred ccccccccCC----CceEEEeeC----CCCceeEEcc-----CCceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCcee
Q 038676 173 KLGLNAHTDK----NIVTILYQN----QVEGLELQTK-----NGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRV 239 (307)
Q Consensus 173 ~~~~~~HtD~----~~lTlL~qd----~~~GLqv~~~-----~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV 239 (307)
......|.|. ...|++..- ..+|+-+... -| +.|.+ .||++++..|-. -.|-|
T Consensus 84 nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g--~~~~~-~~GtVl~~~~~~-----------~~Hgv 149 (171)
T PF12851_consen 84 NRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG--VAFAY-QPGTVLIFCAKR-----------ELHGV 149 (171)
T ss_pred ecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC--EEEec-CCCcEEEEcccc-----------eeeec
Confidence 3456789998 677777652 3466666433 33 77788 899999999843 35655
Q ss_pred ecCC-----CCceEEEEeecC
Q 038676 240 MMTG-----IETRYSTGFFSI 255 (307)
Q Consensus 240 ~~~~-----~~~R~Si~~F~~ 255 (307)
..-. +..|+|++||.+
T Consensus 150 tpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 150 TPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred CcccCCCCCCCeEEEEEEEeE
Confidence 4322 378999999985
No 34
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=91.96 E-value=1.6 Score=36.67 Aligned_cols=85 Identities=21% Similarity=0.305 Sum_probs=43.6
Q ss_pred ceeeeeecCCCCcccccccccccCCCce-------EEEeeCCCCceeEEcc--CCceEEcCCCCCCeEEEEchhHHHHHh
Q 038676 158 LLRVMKYKGPETTEKKLGLNAHTDKNIV-------TILYQNQVEGLELQTK--NGEWINVKPSSPHSFIAMIGDSLYAWT 228 (307)
Q Consensus 158 ~lr~~~Yp~~~~~~~~~~~~~HtD~~~l-------TlL~qd~~~GLqv~~~--~g~W~~v~p~~~g~~vVnvGd~l~~~T 228 (307)
.+-+|+|.+ +. ++++|.|-..+ ||-+- ...-+.+... .+..+.+.. .+|+++|.-|++=..|
T Consensus 98 ~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG-~~~~~~f~~~~~~~~~~~~~L-~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 98 QCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLG-SSRVFRFRNKSDDDEPIEVPL-PPGSLLVMSGEARYDW- 168 (194)
T ss_dssp EEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEE-S-EEEEEEECGGTS-EEEEEE--TTEEEEEETTHHHHE-
T ss_pred EEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEc-cCceEEEeeccCCCccEEEEc-CCCCEEEeChHHhhhe-
Confidence 456788865 23 89999987633 33332 1122333332 356888888 8899999999986665
Q ss_pred cCcccCCCceeec--CCCCceEEEEe
Q 038676 229 NGQLYSPYHRVMM--TGIETRYSTGF 252 (307)
Q Consensus 229 nG~~ks~~HRV~~--~~~~~R~Si~~ 252 (307)
.+.-+... .... .....|+||.|
T Consensus 169 H~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 HGIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EEE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred eEcccccC-CccccccCCCCEEEEEe
Confidence 44333222 0000 01247999987
No 35
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=88.08 E-value=4.1 Score=34.90 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=31.9
Q ss_pred ceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCC-CCceEEEEeec
Q 038676 204 EWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTG-IETRYSTGFFS 254 (307)
Q Consensus 204 ~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~ 254 (307)
.|+.|.| .+|.+|+.-+.+ .|+|.... +.+|+||+|=+
T Consensus 160 ~~~~v~P-~~G~lvlFPS~L------------~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPP-QEGRVLLFESWL------------RHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECC-CCCeEEEECCCC------------ceecCCCCCCCCEEEEEEee
Confidence 4889999 999999998865 89998764 57999999843
No 36
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=84.15 E-value=1.3 Score=33.26 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=24.6
Q ss_pred CceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCC-CCceEEEEe
Q 038676 203 GEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTG-IETRYSTGF 252 (307)
Q Consensus 203 g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~ 252 (307)
..+..++| .+|.+||.-+.+ .|+|.... +.+|+||+|
T Consensus 63 ~~~~~~~p-~~G~lvlFPs~l------------~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEP-EEGDLVLFPSWL------------WHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE----TTEEEEEETTS------------EEEE----SSS-EEEEEE
T ss_pred CceEEeCC-CCCEEEEeCCCC------------EEeccCcCCCCCEEEEEc
Confidence 45888999 999999999866 89998654 468999997
No 37
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=77.07 E-value=13 Score=32.04 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=45.6
Q ss_pred eeeeeecCCCCcccccccccccCC-----C--ceEEEeeCCCCc-eeEE--ccCCceEEcCCCCCCeEEEEchhHHHHHh
Q 038676 159 LRVMKYKGPETTEKKLGLNAHTDK-----N--IVTILYQNQVEG-LELQ--TKNGEWINVKPSSPHSFIAMIGDSLYAWT 228 (307)
Q Consensus 159 lr~~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~qd~~~G-Lqv~--~~~g~W~~v~p~~~g~~vVnvGd~l~~~T 228 (307)
+=+|+|.+. . +++.|.|- + ++.+-+ +.+. +++. .+++.+..+.. .+|.++|.-|++ +.|=
T Consensus 118 ~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSL--G~~~~F~~~~~~~~~~~~~l~L-~~Gdllvm~G~s-r~~~ 187 (213)
T PRK15401 118 CLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSL--GLPAVFQFGGLKRSDPLQRILL-EHGDVVVWGGPS-RLRY 187 (213)
T ss_pred EEEEeccCc-----C-ccccccCCCcccCCCCEEEEeC--CCCeEEEecccCCCCceEEEEe-CCCCEEEECchH-hhee
Confidence 556888643 2 79999994 2 222222 2222 2221 23455889999 999999999986 4433
Q ss_pred cCcccCCCceeecC-CCCceEEEEe
Q 038676 229 NGQLYSPYHRVMMT-GIETRYSTGF 252 (307)
Q Consensus 229 nG~~ks~~HRV~~~-~~~~R~Si~~ 252 (307)
.|.-|- .+...+ .+..|+|+.|
T Consensus 188 HgVp~~--~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 188 HGILPL--KAGEHPLTGECRINLTF 210 (213)
T ss_pred ccCCcC--CCCcCCCCCCCeEEEEe
Confidence 332221 011111 1247999987
No 38
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=74.49 E-value=2.9 Score=39.69 Aligned_cols=51 Identities=27% Similarity=0.355 Sum_probs=36.9
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhC
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFD 59 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 59 (307)
||+||++.+ ..+ ...++..+.+++.|++.|.|+ ||.+...+..+..++|.+
T Consensus 50 IP~i~f~di--~~~-----~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 50 IPEIDFADI--ENG-----GVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp S-EEEHHHH--HCT--------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CceeeHHHH--hCC-----CCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 799999874 222 255778999999999999886 898888888877777754
No 39
>PRK08130 putative aldolase; Validated
Probab=68.46 E-value=6.9 Score=33.69 Aligned_cols=25 Identities=4% Similarity=-0.057 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++++...+.+.|||+=
T Consensus 139 ~~la~~~~~~l~~~~~vll~nHGvi 163 (213)
T PRK08130 139 PAIAEALAGLAARYRAVLLANHGPV 163 (213)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4688999999999999999999963
No 40
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=66.32 E-value=6.9 Score=32.80 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=26.8
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCC
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
||++++.. .+ .+++++.+.+++++...+.|.|||+=
T Consensus 121 v~v~~~~~----~g---~~~la~~~~~~l~~~~~vll~nHGv~ 156 (184)
T PRK08333 121 IPILPFRP----AG---SVELAEQVAEAMKEYDAVIMERHGIV 156 (184)
T ss_pred EeeecCCC----CC---cHHHHHHHHHHhccCCEEEEcCCCCE
Confidence 46666543 12 24688899999999999999999964
No 41
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=58.81 E-value=11 Score=32.61 Aligned_cols=25 Identities=16% Similarity=0.040 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++++...+.|.|||+=
T Consensus 139 ~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 139 PEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred HHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 5789999999999999999999964
No 42
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=50.23 E-value=19 Score=30.90 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++.+...+.|.|||+=
T Consensus 136 ~~la~~v~~~l~~~~~vll~nHGv~ 160 (214)
T PRK06833 136 KELAENAFEAMEDRRAVLLANHGLL 160 (214)
T ss_pred HHHHHHHHHHhCcCCEEEECCCCCE
Confidence 4678889999999999999999964
No 43
>PRK06755 hypothetical protein; Validated
Probab=47.72 E-value=25 Score=30.29 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=25.5
Q ss_pred CCeeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCC
Q 038676 1 LPIIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 1 iPvIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
||+|++.. ++ .+++++.+.+++++...+.|.|||+=
T Consensus 137 IPiv~~~~----~~---~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 137 IPIVEDEK----KF---ADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred EEEEeCCC----ch---hHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 57776643 11 24567777788888889999999964
No 44
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=47.45 E-value=20 Score=32.20 Aligned_cols=25 Identities=8% Similarity=-0.055 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++++...+.|.|||+=
T Consensus 191 ~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 191 DEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4688889999999999999999964
No 45
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=46.87 E-value=23 Score=30.49 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++.+...+.|.|||+=
T Consensus 134 ~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 134 RELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred HHHHHHHHHHhCcCCEEEecCCCCE
Confidence 4678889999998889999999963
No 46
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=46.55 E-value=24 Score=29.37 Aligned_cols=25 Identities=12% Similarity=-0.000 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++++.-.+.|.|||+=
T Consensus 126 ~~la~~v~~~l~~~~~vll~nHG~~ 150 (181)
T PRK08660 126 GELAENVARALSEHKGVVVRGHGTF 150 (181)
T ss_pred HHHHHHHHHHHhhCCEEEEcCCCce
Confidence 4688899999999999999999963
No 47
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=44.26 E-value=21 Score=23.85 Aligned_cols=39 Identities=26% Similarity=0.463 Sum_probs=26.6
Q ss_pred cccccccccCCCce---EEE-------eeCCCCceeEEccCCceEEcCC
Q 038676 172 KKLGLNAHTDKNIV---TIL-------YQNQVEGLELQTKNGEWINVKP 210 (307)
Q Consensus 172 ~~~~~~~HtD~~~l---TlL-------~qd~~~GLqv~~~~g~W~~v~p 210 (307)
+..|.-+-||-.++ |+| +|--..-|||+.-||.|.+|+-
T Consensus 14 nsnG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdikg 62 (64)
T PF06820_consen 14 NSNGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIKG 62 (64)
T ss_pred cCCccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhccC
Confidence 44567778885544 455 1222478999999999999864
No 48
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=43.22 E-value=12 Score=31.07 Aligned_cols=23 Identities=17% Similarity=0.102 Sum_probs=20.4
Q ss_pred HHHHHHHHHHH-hccEEEEecCCC
Q 038676 20 SVKSHVRKALE-DYGCFEALFNKV 42 (307)
Q Consensus 20 ~~~~~l~~A~~-~~Gff~l~nhgi 42 (307)
++++.+.++++ +...+.+.|||+
T Consensus 136 ~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 136 ELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp HHHHHHHHHHTCTSSEEEETTTEE
T ss_pred hhhhhhhhhhcCCceEEeecCCce
Confidence 46788999999 889999999995
No 49
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=42.71 E-value=34 Score=30.66 Aligned_cols=25 Identities=0% Similarity=-0.041 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++++...+.|.|||+=
T Consensus 189 ~eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 189 NEIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4789999999999999999999963
No 50
>PRK06357 hypothetical protein; Provisional
Probab=39.72 E-value=40 Score=29.06 Aligned_cols=25 Identities=20% Similarity=0.174 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhc------cEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDY------GCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~------Gff~l~nhgi~ 43 (307)
.++++.+.+++++. ..+.|.|||+=
T Consensus 142 ~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 142 PELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred HHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 46888888888765 48899999963
No 51
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=39.18 E-value=34 Score=29.36 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
.++++.+.+++.+...+.|.|||+=
T Consensus 133 ~~la~~v~~~~~~~~~vLL~nHG~~ 157 (214)
T TIGR01086 133 TKLASEVVAGILKSKAILLLHHGLI 157 (214)
T ss_pred HHHHHHHHHHhhhCCEEehhcCCCE
Confidence 4578888888888899999999963
No 52
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=38.05 E-value=72 Score=27.42 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=40.3
Q ss_pred ccceeeeeecCCCC-cccccccccccCCCceEEEeeCCCCceeEEc-cCCceEEcCCCCCCeEEEEchhHHHHHhc
Q 038676 156 SYLLRVMKYKGPET-TEKKLGLNAHTDKNIVTILYQNQVEGLELQT-KNGEWINVKPSSPHSFIAMIGDSLYAWTN 229 (307)
Q Consensus 156 ~~~lr~~~Yp~~~~-~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~-~~g~W~~v~p~~~g~~vVnvGd~l~~~Tn 229 (307)
...+|.+||.|... ++-...+..+ -..+.|+..+-..+.. +.|.=+.||| --|+.++|+||-=-.+.+
T Consensus 89 ~G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp-~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 89 PGAMRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPP-GYGHYTINTGDEPLVFLN 158 (209)
T ss_pred CCcccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCC-CcceEeecCCCCCEEEEE
Confidence 34688999988654 3333333222 2344454444344422 3466788899 889999999985444443
No 53
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=37.89 E-value=31 Score=29.74 Aligned_cols=25 Identities=8% Similarity=-0.012 Sum_probs=20.4
Q ss_pred HHHHHHHHHHH--HhccEEEEecCCCC
Q 038676 19 DSVKSHVRKAL--EDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~--~~~Gff~l~nhgi~ 43 (307)
.++++++.+++ .+...+.|.|||+=
T Consensus 142 ~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 142 EAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred HHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 45788888888 77888999999964
No 54
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=37.83 E-value=36 Score=31.83 Aligned_cols=37 Identities=16% Similarity=-0.159 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhC
Q 038676 20 SVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFD 59 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 59 (307)
+.+.++.+++.++|+..+.+-.++.+. +.+.++.|-.
T Consensus 123 ~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G~ 159 (366)
T TIGR02409 123 SVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIGF 159 (366)
T ss_pred HHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhcc
Confidence 467789999999999999998887654 4455555544
No 55
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=36.33 E-value=1.2e+02 Score=24.20 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHhccEEEEecC-CCCHHHHHHHHHHHHH
Q 038676 18 WDSVKSHVRKALEDYGCFEALFN-KVPEEILKAVFGALEE 56 (307)
Q Consensus 18 ~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 56 (307)
+...++++.+.++++.++++.++ |++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 45789999999999998888775 8998888877776654
No 56
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=36.05 E-value=62 Score=27.24 Aligned_cols=26 Identities=15% Similarity=-0.063 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHH---hccEEEEecCCCC
Q 038676 18 WDSVKSHVRKALE---DYGCFEALFNKVP 43 (307)
Q Consensus 18 ~~~~~~~l~~A~~---~~Gff~l~nhgi~ 43 (307)
-+++++.+.++++ +...+.|.|||+=
T Consensus 136 s~ela~~~~~~l~~~~~~~avll~nHGv~ 164 (193)
T TIGR03328 136 IARLADSVAPYLEAYPDVPGVLIRGHGLY 164 (193)
T ss_pred hHHHHHHHHHHHhcCCCCCEEEEcCCcce
Confidence 3568889999996 4789999999963
No 57
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=32.56 E-value=31 Score=22.59 Aligned_cols=28 Identities=25% Similarity=0.430 Sum_probs=20.4
Q ss_pred EEccCCceEEcCCCCCCeEEEEchhHHHHHhc
Q 038676 198 LQTKNGEWINVKPSSPHSFIAMIGDSLYAWTN 229 (307)
Q Consensus 198 v~~~~g~W~~v~p~~~g~~vVnvGd~l~~~Tn 229 (307)
|++++|+++.|+. .++ +.+|+..+.-..
T Consensus 10 VlT~dGeF~~ik~-~~~---~~vG~eI~~~~~ 37 (56)
T PF12791_consen 10 VLTPDGEFIKIKR-KPG---MEVGQEIEFDEK 37 (56)
T ss_pred EEcCCCcEEEEeC-CCC---CcccCEEEEech
Confidence 5578999999988 777 778876544433
No 58
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=32.26 E-value=34 Score=29.15 Aligned_cols=25 Identities=4% Similarity=-0.057 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhccEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~Gff~l~nhgi~ 43 (307)
+++++.+.+++.+.-.+.|.|||+=
T Consensus 136 ~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 136 DEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred HHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 4566777777788889999999963
No 59
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=31.28 E-value=65 Score=20.82 Aligned_cols=43 Identities=12% Similarity=0.220 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCCh
Q 038676 20 SVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPL 62 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~ 62 (307)
+.+..|...+...||......|+-.+...+++...++.+.|+.
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~~ 45 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLPV 45 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-S
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcCC
Confidence 3567889999999998555567777777777888888888764
No 60
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=30.87 E-value=3e+02 Score=25.26 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=52.4
Q ss_pred ceeeeeecCCCCcccccccccccCCC------------ceEEEee--C-CCCceeEEccCCc-----------------e
Q 038676 158 LLRVMKYKGPETTEKKLGLNAHTDKN------------IVTILYQ--N-QVEGLELQTKNGE-----------------W 205 (307)
Q Consensus 158 ~lr~~~Yp~~~~~~~~~~~~~HtD~~------------~lTlL~q--d-~~~GLqv~~~~g~-----------------W 205 (307)
.|++++|-+.. -..+|.|+. +.|+|+- | ..||=-+ -+..+ =
T Consensus 133 ~lQVlrY~~Gq------~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~-FP~~~~~~~~~~~~~~s~c~~~g 205 (310)
T PLN00052 133 NIQILRYEHGQ------KYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETV-FPNAEGWENQPKDDTFSECAHKG 205 (310)
T ss_pred ceEEEecCCCC------CCCCCCCccccccccccCCceeEEEEEEeccCCCCCcee-cCCcccccccccccchhhhhcCC
Confidence 47888886533 256677742 5777765 2 2344333 22221 1
Q ss_pred EEcCCCCCCeEEEEchhHHHHHhcCc-ccCCCceeecCCCCceEEEEeecCCC
Q 038676 206 INVKPSSPHSFIAMIGDSLYAWTNGQ-LYSPYHRVMMTGIETRYSTGFFSIPK 257 (307)
Q Consensus 206 ~~v~p~~~g~~vVnvGd~l~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~P~ 257 (307)
+.|+| ..|..|+.-= ...||. =..++|.+...-...++++...++-.
T Consensus 206 l~VkP-kkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKP-VKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEecc-CcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 78999 9998776432 112343 25678887655456899888777654
No 61
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=29.21 E-value=38 Score=23.07 Aligned_cols=36 Identities=28% Similarity=0.608 Sum_probs=25.8
Q ss_pred ceeEEccCCc-eEEcCCCCCCeEEEEchhHHHHHhcCc
Q 038676 195 GLELQTKNGE-WINVKPSSPHSFIAMIGDSLYAWTNGQ 231 (307)
Q Consensus 195 GLqv~~~~g~-W~~v~p~~~g~~vVnvGd~l~~~TnG~ 231 (307)
|..+.-.+|. |+.+.- .++..++..||.+..-.+++
T Consensus 17 ~~~l~v~~G~vWlT~~g-~~~D~~L~~G~~l~l~~g~~ 53 (63)
T PF11142_consen 17 GQRLRVESGRVWLTREG-DPDDYWLQAGDSLRLRRGGR 53 (63)
T ss_pred CcEEEEccccEEEECCC-CCCCEEECCCCEEEeCCCCE
Confidence 3334334555 999998 89999999999877655543
No 62
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=29.18 E-value=86 Score=28.38 Aligned_cols=30 Identities=27% Similarity=0.424 Sum_probs=25.1
Q ss_pred HHHHHHhccEEEEecCCCCHHHHHHHHHHHHH
Q 038676 25 VRKALEDYGCFEALFNKVPEEILKAVFGALEE 56 (307)
Q Consensus 25 l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~ 56 (307)
..+++++.|||.|.| +|..++.++.+....
T Consensus 17 Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~~ 46 (284)
T PF03668_consen 17 ALRALEDLGYYCVDN--LPPSLLPQLIELLAQ 46 (284)
T ss_pred HHHHHHhcCeeEEcC--CcHHHHHHHHHHHHh
Confidence 478999999999987 888999988876654
No 63
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=27.43 E-value=1.9e+02 Score=23.20 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhccEEEEecC-CCCHHHHHHHHHHHHH
Q 038676 18 WDSVKSHVRKALEDYGCFEALFN-KVPEEILKAVFGALEE 56 (307)
Q Consensus 18 ~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 56 (307)
..+..+++.+.+++..++++.++ |++...+.++....++
T Consensus 5 K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 5 KEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 56789999999999988887765 9998888887777664
No 64
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=27.07 E-value=71 Score=26.38 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=30.3
Q ss_pred CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHHhcCcccCCCceeecCC
Q 038676 192 QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAWTNGQLYSPYHRVMMTG 243 (307)
Q Consensus 192 ~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~ 243 (307)
+.+=+-|++++++||.|.. ..|.+||.-- ...||-...+
T Consensus 102 GtgYfDVrd~dd~WIRi~v-ekGDlivlPa------------GiyHRFTtt~ 140 (179)
T KOG2107|consen 102 GTGYFDVRDKDDQWIRIFV-EKGDLIVLPA------------GIYHRFTTTP 140 (179)
T ss_pred cceEEeeccCCCCEEEEEE-ecCCEEEecC------------cceeeeecCc
Confidence 5666889999999999999 9999887653 2468876554
No 65
>PRK15331 chaperone protein SicA; Provisional
Probab=24.97 E-value=76 Score=26.24 Aligned_cols=42 Identities=10% Similarity=0.269 Sum_probs=34.0
Q ss_pred cHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhC
Q 038676 17 EWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFD 59 (307)
Q Consensus 17 ~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 59 (307)
+.++.++.|.+|+.+-| =.-.-|||+++.++.++..+..||.
T Consensus 8 ~~~~~~~~i~~al~~G~-tlk~l~gis~~~le~iY~~Ay~~y~ 49 (165)
T PRK15331 8 SEERVAEMIWDAVSEGA-TLKDVHGIPQDMMDGLYAHAYEFYN 49 (165)
T ss_pred hHHHHHHHHHHHHHCCC-CHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 35678889999999843 2224589999999999999999995
No 66
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=24.94 E-value=87 Score=29.26 Aligned_cols=37 Identities=19% Similarity=-0.015 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhC
Q 038676 20 SVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFD 59 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 59 (307)
+...++.+++.++|+..+.|-.++.+.+ .+.++.|-.
T Consensus 115 ~~l~~~l~~l~~~G~v~~~g~~~~~~~~---~~~a~riG~ 151 (362)
T TIGR02410 115 STLKSFSKNIYKYGFTFVDNVPVTPEAT---EKLCERISI 151 (362)
T ss_pred HHHHHHHHHHHhhCEEEEcCCCCCHHHH---HHHHHHhcc
Confidence 4678899999999999999988876544 455555543
No 67
>PF11074 DUF2779: Domain of unknown function(DUF2779); InterPro: IPR021301 This domain is conserved in bacteria. The function is not known.
Probab=23.64 E-value=1.7e+02 Score=23.13 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=29.7
Q ss_pred CccHHHHHHHHHHHHHhc-cEEEEecCCCCHHHHHHHHH
Q 038676 15 TPEWDSVKSHVRKALEDY-GCFEALFNKVPEEILKAVFG 52 (307)
Q Consensus 15 ~~~~~~~~~~l~~A~~~~-Gff~l~nhgi~~~~~~~~~~ 52 (307)
.+.|...++.|.+++.+. |...+=|.+.....++++.+
T Consensus 54 ~DPr~~~~~~L~~~i~~~~g~ivvyN~sfE~~rL~ela~ 92 (130)
T PF11074_consen 54 EDPRRELIEALIKAIGSIYGSIVVYNKSFEKTRLKELAE 92 (130)
T ss_pred CCchHHHHHHHHHHhhhhcCeEEEechHHHHHHHHHHHH
Confidence 455889999999999999 99999998766555444433
No 68
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=23.61 E-value=40 Score=19.09 Aligned_cols=17 Identities=12% Similarity=-0.068 Sum_probs=12.2
Q ss_pred EEEecCCCCHHHHHHHH
Q 038676 35 FEALFNKVPEEILKAVF 51 (307)
Q Consensus 35 f~l~nhgi~~~~~~~~~ 51 (307)
.||..||++.+.+.+-+
T Consensus 9 rYV~eh~ls~ee~~~RL 25 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERL 25 (28)
T ss_pred hhHHhcCCCHHHHHHHH
Confidence 47788999987666543
No 69
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=23.39 E-value=2.1e+02 Score=21.52 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=32.6
Q ss_pred eeeCCCCCCCCCCccHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhCCCh
Q 038676 3 IIDFSKPNLKPGTPEWDSVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEELFDLPL 62 (307)
Q Consensus 3 vIDls~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~ 62 (307)
-||+|.+ ..-|+.--++.-.+.+-|+..|. .+.-+|+|+.+.. --+.|+++.
T Consensus 43 ~idLs~v--~rvDSaglALL~~~~~~~k~~g~-~~~L~~~p~~L~t-----La~Ly~l~~ 94 (99)
T COG3113 43 RIDLSGV--SRVDSAGLALLLHLIRLAKKQGN-AVTLTGVPEQLRT-----LAELYNLSD 94 (99)
T ss_pred EEehhhc--ceechHHHHHHHHHHHHHHHcCC-eeEEecCcHHHHH-----HHHHhCcHh
Confidence 3777764 22222234566778888888888 7778899976532 223566554
No 70
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=23.23 E-value=2.5e+02 Score=23.00 Aligned_cols=40 Identities=10% Similarity=0.020 Sum_probs=32.4
Q ss_pred cHHHHHHHHHHHHHhccEEEEecC-CCCHHHHHHHHHHHHH
Q 038676 17 EWDSVKSHVRKALEDYGCFEALFN-KVPEEILKAVFGALEE 56 (307)
Q Consensus 17 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 56 (307)
...+..++|.+.++++-++++.++ |++...+.++....++
T Consensus 5 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 5 EKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 356789999999999987777665 9998888888877765
No 71
>PRK05834 hypothetical protein; Provisional
Probab=23.11 E-value=1.4e+02 Score=25.31 Aligned_cols=24 Identities=8% Similarity=-0.032 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhcc--EEEEecCCCC
Q 038676 20 SVKSHVRKALEDYG--CFEALFNKVP 43 (307)
Q Consensus 20 ~~~~~l~~A~~~~G--ff~l~nhgi~ 43 (307)
..++.+.+++++.. .+.|.|||+=
T Consensus 136 ~la~~v~~~l~~~~~~avLL~nHGvv 161 (194)
T PRK05834 136 RADTEILRYLQEKNKNFVVIKGYGVY 161 (194)
T ss_pred hHHHHHHHHHhhcCCCEEEEcCCcce
Confidence 35677888888755 9999999963
No 72
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=22.47 E-value=81 Score=26.94 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHH-hccEEEEecCCC
Q 038676 19 DSVKSHVRKALE-DYGCFEALFNKV 42 (307)
Q Consensus 19 ~~~~~~l~~A~~-~~Gff~l~nhgi 42 (307)
+++++.+.++++ +...+.|.|||+
T Consensus 148 ~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 148 PTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred HHHHHHHHHHhccCCcEEEECCCce
Confidence 579999999998 888999999996
No 73
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=22.42 E-value=75 Score=22.71 Aligned_cols=21 Identities=10% Similarity=-0.083 Sum_probs=17.4
Q ss_pred HHHHHHHHhccEEEEecCCCC
Q 038676 23 SHVRKALEDYGCFEALFNKVP 43 (307)
Q Consensus 23 ~~l~~A~~~~Gff~l~nhgi~ 43 (307)
+.|..-|-+-||.||.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 458899999999999777554
No 74
>PF11043 DUF2856: Protein of unknown function (DUF2856); InterPro: IPR020500 This phage protein modulates the activity of the host recBCD nuclease and thus protects the linear double stranded DNA from exonuclease degradation [].
Probab=22.24 E-value=1.1e+02 Score=21.84 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhCCChHhhhhc
Q 038676 44 EEILKAVFGALEELFDLPLRTKMRN 68 (307)
Q Consensus 44 ~~~~~~~~~~~~~fF~lp~e~K~~~ 68 (307)
.++++.....-..|.+||.|+|..-
T Consensus 20 sEVL~~~k~N~D~~~aL~~ETKaEr 44 (97)
T PF11043_consen 20 SEVLDNIKNNYDAFMALPPETKAER 44 (97)
T ss_pred HHHHHHHHHHHHHHHcCChhhHHHH
Confidence 4566777777778889999998653
No 75
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=22.02 E-value=1.4e+02 Score=25.97 Aligned_cols=25 Identities=4% Similarity=-0.226 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhc-------cEEEEecCCCC
Q 038676 19 DSVKSHVRKALEDY-------GCFEALFNKVP 43 (307)
Q Consensus 19 ~~~~~~l~~A~~~~-------Gff~l~nhgi~ 43 (307)
.+.++.+.+++++. ..+.|.|||+=
T Consensus 142 ~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v 173 (231)
T PRK08193 142 WETGKVIVETFEKRGIDPAAVPGVLVHSHGPF 173 (231)
T ss_pred hhHHHHHHHHHhhccCCcccCCEEEEcCCCce
Confidence 35778888888864 47889999963
No 76
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase. Members of this family are 3-methyl-2-oxobutanoate hydroxymethyltransferase, the first enzyme of the pantothenate biosynthesis pathway. An alternate name is ketopantoate hydroxymethyltransferase.
Probab=21.70 E-value=2.6e+02 Score=25.03 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=22.1
Q ss_pred HHHHHHHHHhccEEEEecCCCCHHHHHHH
Q 038676 22 KSHVRKALEDYGCFEALFNKVPEEILKAV 50 (307)
Q Consensus 22 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~ 50 (307)
+-+-.+|+++-|.|-|.--+||.++.+++
T Consensus 162 ~i~~A~a~e~AGA~~ivlE~vp~~~a~~I 190 (263)
T TIGR00222 162 LLEDALALEEAGAQLLVLECVPVELAAKI 190 (263)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcHHHHHHH
Confidence 33345688899999999999997765553
No 77
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=21.53 E-value=98 Score=26.34 Aligned_cols=26 Identities=8% Similarity=-0.064 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhcc---EEEEecCCCC
Q 038676 18 WDSVKSHVRKALEDYG---CFEALFNKVP 43 (307)
Q Consensus 18 ~~~~~~~l~~A~~~~G---ff~l~nhgi~ 43 (307)
.+++++.+.+++++.. .+.|.|||+=
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi 172 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGLY 172 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCceE
Confidence 3678999999999874 8999999963
No 78
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=21.49 E-value=1.4e+02 Score=23.04 Aligned_cols=37 Identities=5% Similarity=-0.099 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhccEEEEecC-CCCHHHHHHHHHHHHH
Q 038676 20 SVKSHVRKALEDYGCFEALFN-KVPEEILKAVFGALEE 56 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 56 (307)
+.+....+.|.+.|.=.|.+. |.+.+.++.+.+++++
T Consensus 78 ~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 78 DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 466677778888899988865 8988887777765543
No 79
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=21.40 E-value=2.4e+02 Score=23.02 Aligned_cols=39 Identities=13% Similarity=0.297 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhccEEEEe-cCCCCHHHHHHHHHHHHH
Q 038676 18 WDSVKSHVRKALEDYGCFEAL-FNKVPEEILKAVFGALEE 56 (307)
Q Consensus 18 ~~~~~~~l~~A~~~~Gff~l~-nhgi~~~~~~~~~~~~~~ 56 (307)
+.+..++|.+.+.++-.++|+ .+|++...++++....+.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 467899999999998877776 469999888887776554
No 80
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=21.28 E-value=2.4e+02 Score=25.22 Aligned_cols=37 Identities=16% Similarity=-0.015 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhccEEEEecC-CCCHHHHHHHHHHHHH
Q 038676 20 SVKSHVRKALEDYGCFEALFN-KVPEEILKAVFGALEE 56 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 56 (307)
+...++.+.|.+.|.-.|++. |.+.+.++.+.++++.
T Consensus 80 ~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 80 EATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred hhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 366778888999998888775 9999988888887776
No 81
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=21.21 E-value=1.7e+02 Score=18.58 Aligned_cols=28 Identities=7% Similarity=0.183 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHH
Q 038676 21 VKSHVRKALEDYGCFEALFNKVPEEILKAVFGAL 54 (307)
Q Consensus 21 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~ 54 (307)
.++.+.+++++.||. |++++++.+++.+
T Consensus 20 ~~~~~l~~l~~~g~~------is~~l~~~~L~~~ 47 (48)
T PF11848_consen 20 EVKPLLDRLQQAGFR------ISPKLIEEILRRA 47 (48)
T ss_pred hHHHHHHHHHHcCcc------cCHHHHHHHHHHc
Confidence 456677888999988 7888888877654
No 82
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=20.91 E-value=1.7e+02 Score=25.16 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHH
Q 038676 20 SVKSHVRKALEDYGCFEALFNKVPEEILKAVFGALEEL 57 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 57 (307)
+..+++.+++.+.||+.|.+-.++.+.+. +.++.|
T Consensus 24 ~~~~~~~~~l~~~G~vvlrg~~~~~~~~~---~~~~~~ 58 (258)
T PF02668_consen 24 EELEELREALAEYGFVVLRGFPLDPEQFE---ALASRL 58 (258)
T ss_dssp CHHHHHHHHHHHHSEEEEESCTSSHHHHH---HHHHHH
T ss_pred HHHHHHHHHHhcccEEEEcCCCCCHHHHH---HHHHhh
Confidence 47889999999999999998887655444 455555
No 83
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=20.77 E-value=83 Score=26.37 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=35.5
Q ss_pred CCCceeEEccCCceEEcCCCCCCeEEEEchhHHHHH---hcCcccCCCceeecCCCCceEEEE-eecCCCCCc
Q 038676 192 QVEGLELQTKNGEWINVKPSSPHSFIAMIGDSLYAW---TNGQLYSPYHRVMMTGIETRYSTG-FFSIPKAGY 260 (307)
Q Consensus 192 ~~~GLqv~~~~g~W~~v~p~~~g~~vVnvGd~l~~~---TnG~~ks~~HRV~~~~~~~R~Si~-~F~~P~~d~ 260 (307)
..-||++ +++| |++|.. .|+.. ..+.=+..+++||...++.||++- ...+.+..-
T Consensus 22 ~~~GL~l-d~~G-~v~v~~------------Ll~~~~~~~~~~t~~~l~~vV~~d~K~Rf~l~~~~IRA~qGH 80 (179)
T PRK00819 22 EAIGLTL-DEEG-WVDIDA------------LIEALAKAYKWVTRELLEAVVESDDKGRFEISGDRIRARQGH 80 (179)
T ss_pred HHcCCcc-CCCC-CEEHHH------------HHHHHHHccCCCCHHHHHHHHHcCCCcceEecCceEEeccCc
Confidence 3568888 7777 988865 33332 123345678889888889999996 344444443
No 84
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=20.71 E-value=3.4e+02 Score=19.70 Aligned_cols=41 Identities=10% Similarity=0.151 Sum_probs=32.4
Q ss_pred cHHHHHHHHHHHHHhccEEEE-ecCCCCHHHHHHHHHHHHHH
Q 038676 17 EWDSVKSHVRKALEDYGCFEA-LFNKVPEEILKAVFGALEEL 57 (307)
Q Consensus 17 ~~~~~~~~l~~A~~~~Gff~l-~nhgi~~~~~~~~~~~~~~f 57 (307)
..++.++++.+.+.++=.+++ ..+|++...+.++....+..
T Consensus 5 ~K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 5 KKEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 456789999999999955555 55799998888888877765
No 85
>KOG1602 consensus Cis-prenyltransferase [Lipid transport and metabolism]
Probab=20.57 E-value=1.6e+02 Score=26.18 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhccE-------EEEecCCCCHHHHHHHHHHHHHHhCCChHhhhhcc
Q 038676 20 SVKSHVRKALEDYGC-------FEALFNKVPEEILKAVFGALEELFDLPLRTKMRNI 69 (307)
Q Consensus 20 ~~~~~l~~A~~~~Gf-------f~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~ 69 (307)
....+|.+-|.++|. |.+.|..=|.+.++.+++++++-++.+.+....+.
T Consensus 67 ~~l~~ile~C~~lGI~~vT~fAFSieNFkRs~eEVd~LM~L~~~k~~~~~~~~~~~~ 123 (271)
T KOG1602|consen 67 EALKEILELCKELGIKEVTVFAFSIENFKRSPEEVDGLMDLALEKIERLLEQGEKLD 123 (271)
T ss_pred HHHHHHHHHHHHcCCcEEEEEEEehhhhCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 466789999999996 45567788899999999999999998887765553
No 86
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=20.30 E-value=2.6e+02 Score=23.16 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhccEEEEec-CCCCHHHHHHHHHHHHH
Q 038676 18 WDSVKSHVRKALEDYGCFEALF-NKVPEEILKAVFGALEE 56 (307)
Q Consensus 18 ~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 56 (307)
+.+..++|.+.+.++-.++|.+ .|++...++++....++
T Consensus 3 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 3 KKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 4678999999999998887765 69999888887777664
No 87
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=20.19 E-value=46 Score=25.07 Aligned_cols=29 Identities=31% Similarity=0.477 Sum_probs=18.8
Q ss_pred EchhHHHHHhcCcccCCCceeecCCCCceEEE
Q 038676 219 MIGDSLYAWTNGQLYSPYHRVMMTGIETRYST 250 (307)
Q Consensus 219 nvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si 250 (307)
.||-.|..++-|..- +.|||++.. .|+|.
T Consensus 41 qVG~il~~l~~~s~l-PWhRVvns~--G~isl 69 (103)
T COG3695 41 QVGRILKHLPEGSDL-PWHRVVNSD--GRISL 69 (103)
T ss_pred HHHHHHhhCCCCCCC-ChhheecCC--CcccC
Confidence 356667777766544 699999864 45544
No 88
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=20.00 E-value=2.2e+02 Score=23.57 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=34.5
Q ss_pred ceeeeeecCCCCcccccccccccCCCce-------EEEeeCCCCc-eeEE--ccCCceEEcCCCCCCeEEEEchhH
Q 038676 158 LLRVMKYKGPETTEKKLGLNAHTDKNIV-------TILYQNQVEG-LELQ--TKNGEWINVKPSSPHSFIAMIGDS 223 (307)
Q Consensus 158 ~lr~~~Yp~~~~~~~~~~~~~HtD~~~l-------TlL~qd~~~G-Lqv~--~~~g~W~~v~p~~~g~~vVnvGd~ 223 (307)
..=+|+|++. -++++|.|-.-+ .+-+ +.+. +.+. .+++....+.. .+|.++|.-|+.
T Consensus 96 ~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSL--G~~r~F~~~~~~~~~~~~~l~L-~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSL--GLPAIFLIGGLKRNDPPKRLRL-HSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecCC------CccccccccccccCCCCEEEEeC--CCCEEEEecCCcCCCceEEEEe-CCCCEEEECCch
Confidence 3557889754 378999995222 1111 1122 1221 12445788888 899999999874
Done!