Query 038677
Match_columns 186
No_of_seqs 132 out of 1619
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 23:38:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 99.9 1.1E-23 3.7E-28 160.2 13.5 171 1-185 38-250 (494)
2 3qz1_A Steroid 21-hydroxylase; 99.9 1.4E-23 4.8E-28 159.6 9.5 171 1-185 52-261 (496)
3 3pm0_A Cypib1, cytochrome P450 99.9 5E-22 1.7E-26 151.4 12.5 175 1-185 37-258 (507)
4 3n9y_A Cholesterol SIDE-chain 99.9 9.7E-21 3.3E-25 143.7 13.1 102 1-104 41-145 (487)
5 3k9v_A 1,25-dihydroxyvitamin D 99.9 2.1E-20 7E-25 141.6 14.7 172 1-184 57-274 (482)
6 3s79_A Cytochrome P450 19A1; o 99.8 1.6E-20 5.6E-25 143.0 13.6 174 1-185 77-284 (503)
7 3e6i_A CYPIIE1, P450-J, cytoch 99.8 6.4E-21 2.2E-25 144.3 10.5 167 1-185 39-250 (476)
8 3czh_A Cytochrome P450 2R1; vi 99.8 2.3E-20 7.7E-25 141.7 12.8 170 1-185 43-256 (481)
9 2hi4_A Cytochrome P450 1A2; CY 99.8 1.4E-20 4.6E-25 143.3 11.4 172 1-184 44-264 (495)
10 3mdm_A Cholesterol 24-hydroxyl 99.8 3.5E-20 1.2E-24 139.6 12.9 174 1-185 19-233 (456)
11 2fdv_A Cytochrome P450 2A6; CY 99.8 1.4E-20 4.8E-25 142.6 10.6 168 1-185 39-251 (476)
12 3gw9_A Sterol 14alpha-demethyl 99.8 2.3E-20 8E-25 140.2 9.7 170 1-185 32-240 (450)
13 3ld6_A Lanosterol 14-alpha dem 99.8 3.8E-20 1.3E-24 139.7 9.7 100 1-102 40-139 (461)
14 1po5_A Cytochrome P450 2B4; ox 99.8 3.5E-20 1.2E-24 140.4 9.5 167 1-184 39-250 (476)
15 3nxu_A Cytochrome P450 3A4; al 99.8 1.7E-20 5.7E-25 142.3 6.1 98 1-103 42-140 (485)
16 1r9o_A Cytochrome P450 2C9; mo 99.8 6.8E-20 2.3E-24 138.8 8.2 167 1-184 40-251 (477)
17 3tbg_A Cytochrome P450 2D6; mo 99.8 1.3E-18 4.4E-23 131.7 10.0 101 1-102 39-143 (479)
18 2ij2_A Cytochrome P450 BM3; mo 99.8 9.9E-18 3.4E-22 126.9 12.3 166 1-185 32-239 (470)
19 3oo3_A OXY protein; cytochrome 99.7 1.2E-17 4.3E-22 123.3 11.6 163 3-185 22-205 (384)
20 3i3k_A Lanosterol 14-alpha dem 99.7 6.6E-18 2.2E-22 127.4 9.7 163 1-185 40-239 (461)
21 2ve3_A Putative cytochrome P45 99.7 8.3E-17 2.8E-21 121.0 12.2 162 1-185 39-230 (444)
22 3dbg_A Putative cytochrome P45 99.7 7.4E-18 2.5E-22 127.4 6.5 161 2-185 52-250 (467)
23 2cib_A Cytochrome P450 51; hem 99.7 5.2E-17 1.8E-21 122.4 10.5 167 1-185 33-231 (455)
24 3ejb_B Biotin biosynthesis cyt 99.7 8.5E-16 2.9E-20 114.2 13.7 158 3-184 23-211 (404)
25 1cpt_A Cytochrome P450-TERP; o 99.7 9.6E-16 3.3E-20 114.7 13.1 97 3-102 35-145 (428)
26 2cd8_A Cytochrome P450 monooxy 99.7 2.7E-16 9.4E-21 117.9 9.9 161 3-185 56-239 (436)
27 1izo_A P450bsbeta, cytochrome 99.7 1.1E-15 3.7E-20 114.1 12.9 166 1-185 28-219 (417)
28 4fb2_A P450CIN; heme, monooxyg 99.7 3.9E-17 1.3E-21 121.2 4.7 173 1-185 28-209 (398)
29 3aba_A Cytochrome P450; oxidor 99.7 6E-16 2E-20 115.0 10.7 162 3-185 29-214 (403)
30 2y5n_A MYCG, P-450-like protei 99.7 6.2E-16 2.1E-20 115.4 10.6 162 3-185 47-231 (417)
31 3lxh_A Cytochrome P450; heme, 99.7 5.8E-16 2E-20 115.7 10.3 160 3-185 49-233 (421)
32 1ued_A P450 OXYC, P450 monooxy 99.7 1.4E-15 4.7E-20 113.2 12.1 161 3-185 34-224 (406)
33 3oft_A Cytochrome P450, CYP101 99.7 4.3E-16 1.5E-20 115.5 9.3 162 1-185 33-211 (396)
34 3a4g_A Vitamin D hydroxylase; 99.7 5.2E-16 1.8E-20 115.6 9.7 160 3-185 30-212 (411)
35 3tkt_A Cytochrome P450; aromat 99.6 8.5E-16 2.9E-20 115.7 10.2 163 3-185 55-266 (450)
36 3tyw_A Putative cytochrome P45 99.6 6E-16 2E-20 115.5 9.0 162 2-185 39-226 (417)
37 1lfk_A OXYB, P450 monooxygenas 99.6 2.6E-15 9E-20 111.4 12.4 162 2-185 23-215 (398)
38 1jfb_A Nitric-oxide reductase 99.6 1.9E-15 6.6E-20 112.3 11.5 166 3-184 27-216 (404)
39 1odo_A Putative cytochrome P45 99.6 1.5E-15 5E-20 113.1 10.3 163 3-185 25-216 (408)
40 1z8o_A 6-deoxyerythronolide B 99.6 2.9E-15 9.9E-20 111.3 11.5 160 3-185 24-217 (404)
41 2z3t_A Cytochrome P450; monoxy 99.6 3.7E-15 1.3E-19 111.5 11.8 94 3-102 30-141 (425)
42 3abb_A CYP105D6, cytochrome P4 99.6 7E-16 2.4E-20 114.8 7.7 160 3-185 34-220 (408)
43 3r9b_A Cytochrome P450 164A2; 99.6 4.5E-15 1.5E-19 110.8 12.1 157 3-185 39-233 (418)
44 3awm_A Fatty acid alpha-hydrox 99.6 7.1E-15 2.4E-19 109.6 12.7 165 2-185 28-218 (415)
45 2z36_A MOXA, cytochrome P450 t 99.6 4.7E-15 1.6E-19 110.5 11.5 160 4-185 33-222 (413)
46 2wm5_A CYP124, putative cytoch 99.6 3.3E-15 1.1E-19 112.0 10.4 165 3-185 54-251 (435)
47 3ivy_A Cytochrome P450 CYP125; 99.6 2.6E-15 8.8E-20 112.6 9.6 97 3-102 47-159 (433)
48 2zbx_A Cytochrome P450-SU1; be 99.6 2E-15 6.9E-20 112.5 8.9 160 3-185 34-221 (412)
49 1gwi_A CYP154C1, cytochrome P4 99.6 7.1E-15 2.4E-19 109.5 10.0 162 3-185 27-219 (411)
50 2dkk_A Cytochrome P450; CYP158 99.6 1.2E-14 4.3E-19 108.2 9.2 162 3-185 37-223 (411)
51 2xkr_A CYP142, putative cytoch 99.6 1.3E-14 4.4E-19 107.7 9.2 155 4-185 29-207 (398)
52 3buj_A CALO2; heme, iron, meta 99.6 8.3E-15 2.8E-19 108.6 8.0 157 3-185 23-211 (397)
53 2xbk_A PIMD protein; epoxidati 99.6 1.9E-14 6.4E-19 107.0 9.7 149 3-166 36-212 (404)
54 1q5d_A P450 epoxidase; cytochr 99.5 1E-14 3.6E-19 108.8 7.9 169 3-185 36-231 (419)
55 3v8d_A Cholesterol 7-alpha-mon 99.5 1.3E-15 4.4E-20 115.8 2.5 97 1-101 42-139 (491)
56 1n97_A CYP175A1; electron tran 99.5 6.7E-15 2.3E-19 108.9 6.2 95 1-102 27-122 (389)
57 2zwu_A Camphor 5-monooxygenase 99.5 1.7E-13 6E-18 102.1 12.9 156 3-185 47-226 (415)
58 3nc3_A Cytochrome P450 CYPX; c 99.5 4.3E-15 1.5E-19 111.6 3.9 94 3-102 63-156 (441)
59 2uuq_A CYP130, cytochrome P450 99.5 5.5E-14 1.9E-18 104.8 7.9 95 3-102 35-139 (414)
60 3mgx_A Putative P450 monooxyge 99.5 2.9E-14 9.8E-19 106.4 5.4 96 4-102 48-149 (415)
61 3rwl_A Cytochrome P450 alkane 99.5 5E-13 1.7E-17 100.0 12.0 162 4-185 49-243 (426)
62 2jjn_A Cytochrome P450 113A1; 99.5 1.9E-13 6.4E-18 101.8 9.0 90 4-100 39-128 (411)
63 3p3o_A Cytochrome P450; monoox 99.4 2.7E-13 9.3E-18 101.1 7.0 159 3-185 42-231 (416)
64 1s1f_A Putative cytochrome P45 99.4 7.1E-13 2.4E-17 98.6 7.7 96 3-102 34-136 (406)
65 2wiy_A XPLA-heme, cytochrome P 99.4 1.5E-12 5.2E-17 96.4 7.9 157 4-185 31-211 (394)
66 2rfb_A Cytochrome P450; heme, 99.3 2E-12 7E-17 94.0 5.1 88 3-102 2-90 (343)
67 1io7_A Cytochrome P450 CYP119; 99.2 1.1E-11 3.6E-16 91.1 6.3 92 3-101 9-110 (368)
68 3dax_A Cytochrome P450 7A1; ch 99.2 1E-11 3.5E-16 94.3 3.1 95 1-101 42-139 (491)
69 3b98_A Prostaglandin I2 syntha 99.2 2.9E-11 1E-15 91.4 5.1 94 1-102 47-141 (475)
70 1n40_A P450 MT2, cytochrome P4 99.1 8.2E-12 2.8E-16 92.6 0.1 93 3-103 26-126 (396)
71 4dxy_A Cytochrome P450, CYP101 99.1 7.2E-10 2.5E-14 82.7 10.1 83 17-102 62-144 (417)
72 3b4x_A 367AA long hypothetical 99.1 5.2E-11 1.8E-15 87.4 3.0 91 3-102 9-109 (367)
73 3b6h_A Prostacyclin synthase; 99.0 5.1E-10 1.8E-14 85.1 7.2 94 1-101 47-141 (498)
74 4dnj_A Putative cytochrome P45 98.9 3.7E-09 1.3E-13 78.8 7.1 95 4-103 45-143 (412)
75 3dan_A Cytochrome P450 74A2; A 98.9 1.8E-09 6.3E-14 81.5 5.2 98 2-103 44-154 (473)
76 3dsk_A Cytochrome P450 74A, ch 98.8 3.9E-10 1.3E-14 85.7 -0.1 98 2-103 62-172 (495)
77 2yjn_B Erycii, DTDP-4-keto-6-d 89.1 0.0036 1.2E-07 46.1 -7.0 73 7-102 72-153 (381)
78 1s79_A Lupus LA protein; RRM, 70.5 8.9 0.0003 22.1 4.4 38 3-40 33-78 (103)
79 2diu_A KIAA0430 protein; struc 65.5 17 0.00058 20.9 4.7 39 3-42 35-75 (96)
80 1iqt_A AUF1, heterogeneous nuc 52.1 11 0.00038 19.7 2.4 32 3-34 21-61 (75)
81 2cpi_A CCR4-NOT transcription 51.6 25 0.00086 20.2 4.1 40 2-41 39-91 (111)
82 2mss_A Protein (musashi1); RNA 50.2 21 0.00071 18.6 3.3 31 3-33 21-60 (75)
83 2nlw_A Eukaryotic translation 49.0 34 0.0012 19.4 4.3 31 3-33 43-80 (105)
84 2krb_A Eukaryotic translation 48.5 30 0.001 18.4 4.8 30 3-32 29-65 (81)
85 1jmt_A Splicing factor U2AF 35 47.9 28 0.00095 20.0 3.8 39 3-41 49-96 (104)
86 3s7r_A Heterogeneous nuclear r 44.9 26 0.0009 18.8 3.3 32 3-34 33-73 (87)
87 2pe8_A Splicing factor 45; RRM 44.8 39 0.0013 19.4 4.1 40 2-41 34-84 (105)
88 1x5p_A Negative elongation fac 44.6 39 0.0013 18.7 4.3 31 3-33 35-68 (97)
89 3v4m_A Splicing factor U2AF 65 44.0 44 0.0015 19.1 4.5 39 3-41 37-87 (105)
90 1fry_A Myeloid antimicrobial p 43.2 6 0.00021 16.3 0.2 7 3-9 15-21 (29)
91 1nu4_A U1A RNA binding domain; 42.9 41 0.0014 18.5 4.5 30 3-32 34-69 (97)
92 3s6e_A RNA-binding protein 39; 40.4 38 0.0013 19.9 3.6 39 3-41 39-83 (114)
93 2do4_A Squamous cell carcinoma 39.3 49 0.0017 18.3 4.5 31 3-33 39-77 (100)
94 2a3j_A U1 small nuclear ribonu 37.8 65 0.0022 19.2 4.7 30 3-32 55-90 (127)
95 2d9o_A DNAJ (HSP40) homolog, s 37.5 58 0.002 18.5 4.8 31 3-33 39-73 (100)
96 2bz2_A Negative elongation fac 36.9 56 0.0019 19.2 4.0 30 3-32 59-91 (121)
97 1x4d_A Matrin 3; structural ge 36.5 61 0.0021 18.5 4.9 31 2-32 37-70 (102)
98 2kvi_A Nuclear polyadenylated 35.7 57 0.0019 18.0 4.8 31 3-33 33-64 (96)
99 1x4f_A Matrin 3; structural ge 35.7 54 0.0018 19.2 3.7 31 2-32 47-80 (112)
100 1p27_B RNA-binding protein 8A; 35.1 61 0.0021 18.1 5.0 30 3-32 45-83 (106)
101 3md1_A Nuclear and cytoplasmic 35.1 52 0.0018 17.3 3.8 30 3-32 23-61 (83)
102 2dgs_A DAZ-associated protein 32.6 65 0.0022 17.7 5.8 39 3-41 32-79 (99)
103 2d9p_A Polyadenylate-binding p 32.5 67 0.0023 17.8 5.1 31 2-32 36-73 (103)
104 3d2w_A TAR DNA-binding protein 32.4 64 0.0022 17.6 4.4 28 3-30 33-64 (89)
105 3ctr_A Poly(A)-specific ribonu 32.2 40 0.0014 19.6 2.6 40 3-42 27-69 (101)
106 2hvz_A Splicing factor, argini 31.8 65 0.0022 17.8 3.6 39 3-41 22-65 (101)
107 2dhx_A Poly (ADP-ribose) polym 31.6 79 0.0027 18.4 4.7 35 6-40 38-73 (104)
108 1whv_A Poly(A)-specific ribonu 31.2 58 0.002 18.8 3.1 30 3-32 37-67 (100)
109 1wwh_A Nucleoporin 35, nucleop 30.3 91 0.0031 18.7 4.3 37 3-39 45-84 (119)
110 2cpf_A RNA binding motif prote 30.3 72 0.0025 17.5 3.6 31 3-33 27-69 (98)
111 2ytc_A PRE-mRNA-splicing facto 30.2 66 0.0022 17.0 3.9 30 3-32 34-66 (85)
112 4f25_A Polyadenylate-binding p 29.8 83 0.0028 18.1 4.0 31 3-33 27-64 (115)
113 3ulh_A THO complex subunit 4; 29.6 74 0.0025 17.8 3.6 30 3-32 51-88 (107)
114 3ue2_A Poly(U)-binding-splicin 29.3 90 0.0031 18.3 4.2 39 3-41 47-99 (118)
115 2cq3_A RNA-binding protein 9; 29.3 78 0.0027 17.6 4.7 30 3-32 37-73 (103)
116 3ex7_B RNA-binding protein 8A; 28.4 91 0.0031 18.1 5.1 39 3-41 44-92 (126)
117 3ucg_A Polyadenylate-binding p 28.3 73 0.0025 17.0 3.4 30 3-32 28-66 (89)
118 1whx_A Hypothetical protein ri 28.0 89 0.003 17.8 5.1 39 3-41 32-74 (111)
119 2err_A Ataxin-2-binding protei 27.9 56 0.0019 18.6 2.9 30 3-32 51-87 (109)
120 2dnm_A SRP46 splicing factor; 27.9 83 0.0028 17.4 4.0 30 3-32 35-73 (103)
121 2cq4_A RNA binding motif prote 27.9 73 0.0025 18.1 3.5 36 3-38 47-91 (114)
122 2cq1_A PTB-like protein L; RRM 27.3 90 0.0031 17.7 4.6 31 2-32 36-69 (101)
123 2cq0_A Eukaryotic translation 27.2 86 0.0029 17.4 3.9 31 2-32 36-75 (103)
124 2jwn_A Embryonic polyadenylate 27.0 65 0.0022 18.7 3.2 30 3-32 58-96 (124)
125 2rs2_A Musashi-1, RNA-binding 26.9 93 0.0032 17.7 4.2 32 3-34 47-87 (109)
126 1uaw_A Mouse-musashi-1; RNP-ty 26.7 69 0.0024 16.5 3.0 31 3-33 22-61 (77)
127 2cph_A RNA binding motif prote 26.7 89 0.003 17.4 5.4 39 3-41 37-87 (107)
128 2jvo_A Nucleolar protein 3; nu 26.6 94 0.0032 17.7 3.9 30 3-32 53-83 (108)
129 4a8x_A RNA-binding protein wit 26.6 79 0.0027 16.7 4.3 30 3-32 26-65 (88)
130 1x5u_A Splicing factor 3B subu 26.5 89 0.0031 17.3 5.1 31 3-33 37-76 (105)
131 2dgv_A HnRNP M, heterogeneous 26.1 84 0.0029 16.9 4.4 30 3-32 30-66 (92)
132 2ywk_A Putative RNA-binding pr 25.9 86 0.0029 17.0 3.7 30 3-32 38-75 (95)
133 2dh8_A DAZ-associated protein 25.4 72 0.0025 17.8 3.1 38 3-40 38-84 (105)
134 4fxv_A ELAV-like protein 1; RN 25.1 97 0.0033 17.3 3.6 30 3-32 41-79 (99)
135 2dnr_A Synaptojanin-1; RRM dom 24.9 1E+02 0.0035 17.4 3.6 31 3-33 37-68 (91)
136 1whw_A Hypothetical protein ri 24.6 95 0.0032 17.0 4.8 30 3-32 30-68 (99)
137 3ns6_A Eukaryotic translation 24.2 1E+02 0.0034 17.1 4.6 30 3-32 34-72 (100)
138 1sjq_A Polypyrimidine tract-bi 23.5 1.1E+02 0.0039 17.6 3.7 30 3-32 38-70 (105)
139 2cqd_A RNA-binding region cont 23.5 1.1E+02 0.0038 17.4 3.8 32 3-34 39-79 (116)
140 2cpj_A Non-POU domain-containi 23.3 1E+02 0.0035 16.9 3.7 30 3-32 37-69 (99)
141 1x4c_A Splicing factor, argini 23.1 1.1E+02 0.0038 17.2 4.6 31 3-33 37-69 (108)
142 3md3_A Nuclear and cytoplasmic 22.9 1.2E+02 0.0041 18.2 4.0 30 3-32 22-59 (166)
143 2dit_A HIV TAT specific factor 22.7 1.2E+02 0.004 17.3 3.7 31 2-32 47-82 (112)
144 1x4b_A Heterogeneous nuclear r 22.3 86 0.0029 17.9 3.0 31 3-33 49-88 (116)
145 1oo0_B CG8781-PA, drosophila Y 21.9 1.2E+02 0.004 17.1 4.9 30 3-32 48-86 (110)
146 3mdf_A Peptidyl-prolyl CIS-tra 21.8 99 0.0034 16.2 4.9 30 3-32 29-67 (85)
147 3lqv_A PRE-mRNA branch site pr 21.7 1.2E+02 0.0041 17.2 5.3 30 3-32 30-65 (115)
148 2fy1_A RNA-binding motif prote 21.6 1.3E+02 0.0043 17.3 4.2 39 3-41 29-76 (116)
149 2dnh_A Bruno-like 5, RNA bindi 21.2 1.2E+02 0.004 16.8 4.0 30 3-32 37-74 (105)
150 1x5s_A Cold-inducible RNA-bind 21.2 1.1E+02 0.0039 16.7 4.2 30 3-32 34-72 (102)
151 2ad9_A Polypyrimidine tract-bi 21.0 1.3E+02 0.0046 17.7 3.6 30 3-32 53-85 (119)
152 1wex_A Hypothetical protein (r 20.6 1.3E+02 0.0044 17.1 4.4 30 3-32 37-69 (104)
153 1l3k_A Heterogeneous nuclear r 20.3 1.1E+02 0.0037 19.2 3.4 32 3-34 126-166 (196)
154 1p1t_A Cleavage stimulation fa 20.2 1.2E+02 0.0042 16.7 3.5 30 3-32 30-68 (104)
155 2x1f_A MRNA 3'-END-processing 20.1 1.2E+02 0.0041 16.5 4.6 30 3-32 24-62 (96)
156 3beg_B Splicing factor, argini 20.1 1.4E+02 0.0047 17.1 5.8 39 3-41 38-79 (115)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.91 E-value=1.1e-23 Score=160.23 Aligned_cols=171 Identities=20% Similarity=0.295 Sum_probs=127.9
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++|||||++++|+.+.|+|+||+++++++.++...|++||.......++.++.|++++++|+.|+.+|+++++. |+.
T Consensus 38 ~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~-f~~ 116 (494)
T 3swz_A 38 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMAT-FAL 116 (494)
T ss_dssp THHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHH-TTT
T ss_pred HHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHH-HHH
Confidence 6789999999999999999999999999999988889999988766666655555788877799999999999987 653
Q ss_pred --HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh---------------------------------
Q 038677 81 --YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD--------------------------------- 125 (186)
Q Consensus 81 --~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 125 (186)
..+..+.+.+.++++.+++.+....+ .++|+...+..
T Consensus 117 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~--------~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 188 (494)
T 3swz_A 117 FKDGDQKLEKIICQEISTLCDMLATHNG--------QSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGII 188 (494)
T ss_dssp TSSSTTCHHHHHHHHHHHHHHHHHHTTT--------EEECCHHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHcCC--------CcccHHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHH
Confidence 33567899999999999998863211 01111111111
Q ss_pred -------cccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 126 -------SIHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 126 -------~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+.+++|+++++|. ...+++.+..+.+.+++..+++++++..+.+.. .|+++.|++
T Consensus 189 ~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~d~l~~ll~ 250 (494)
T 3swz_A 189 DNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKFRSDSI----TNMLDTLMQ 250 (494)
T ss_dssp HHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCC----CSHHHHHHH
T ss_pred HhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch----hHHHHHHHH
Confidence 0566788888762 335666777778888999999888766543332 589988874
No 2
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.89 E-value=1.4e-23 Score=159.61 Aligned_cols=171 Identities=15% Similarity=0.265 Sum_probs=128.1
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++|+.+.|+|+||+++++|+.++...|++|+..........+..+++++++|+.|+++||++++. |+.
T Consensus 52 l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~-f~~ 130 (496)
T 3qz1_A 52 LTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSA-LLL 130 (496)
T ss_dssp GGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHHH-HHC
T ss_pred HHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHHHHHHH-Hhh
Confidence 6799999999999999999999999999999888788888876644333333333788887799999999999988 676
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc----------------------------------
Q 038677 81 YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS---------------------------------- 126 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 126 (186)
+.++.+.+.+.++++.+++.+.. .. +.++|+.+++..+
T Consensus 131 ~~~~~~~~~i~~~~~~l~~~l~~------~~--~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 202 (496)
T 3qz1_A 131 GTRSSMEPWVDQLTQEFCERMRV------QA--GAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDH 202 (496)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHT------TC--SCCCHHHHHHTHHHHHHTTTTSTTCCCHHHHHHHHHHHHTTTTTTSS
T ss_pred ccHhhHHHHHHHHHHHHHHHHHh------cC--CCccCHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence 66678999999999999999973 11 1245554444433
Q ss_pred -----ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 -----IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 -----~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.+|+++++|. +..+++.+..+.+.+++.++|+++++..+.+.. +|+++.|++
T Consensus 203 ~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~d~l~~ll~ 261 (496)
T 3qz1_A 203 WSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESMVAGQW----RDMTDYMLQ 261 (496)
T ss_dssp HHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCC----SSSHHHHTT
T ss_pred chhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc----cchHHHHHH
Confidence 234666666652 345667788888999999999999886544332 589888875
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.88 E-value=5e-22 Score=151.40 Aligned_cols=175 Identities=15% Similarity=0.244 Sum_probs=124.4
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhh--c
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLEL--L 78 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~--f 78 (186)
|+++|||||++++|+.+.|+|+||+++++|+.++...|.+++..........+ .+++++.+|+.|+++|+++++.+ |
T Consensus 37 ~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~g-~~l~~~~~g~~w~~~R~~~~~~~~~~ 115 (507)
T 3pm0_A 37 LARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGG-RSMAFGHYSEHWKVQRRAAHSMMRNF 115 (507)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGGGG-TCSSSSCSSHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhcCC-CceEECCCChHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999998888889888877655444433 46766656999999999999863 2
Q ss_pred CHHH---HHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-----------------------------
Q 038677 79 SNYR---LEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS----------------------------- 126 (186)
Q Consensus 79 ~~~~---l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 126 (186)
+... ++.+.+.+.++++.+++.+....... ..+|+.+.+..+
T Consensus 116 ~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~------~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~ 189 (507)
T 3pm0_A 116 FTRQPRSRQVLEGHVLSEARELVALLVRGSADG------AFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNE 189 (507)
T ss_dssp TTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGG------CCBCCHHHHHHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHHHhhcccC------CCcChHHHHHHHHHHHHHHHHccccCCCCCHHHHHHHHHHH
Confidence 2221 34588999999999999997432211 122322222221
Q ss_pred -----------ccccccccccCCC--CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 -----------IHALPFLIWLDIG--GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 -----------~~~~p~l~~l~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.+|++.++|.. ...+++.+..+.+.+++.+.++++++..+.+.. ..|+++.|++
T Consensus 190 ~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~d~l~~ll~ 258 (507)
T 3pm0_A 190 EFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAA---PRDMMDAFIL 258 (507)
T ss_dssp HHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCC---CCSHHHHHHH
T ss_pred HHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC---CccHHHHHHH
Confidence 4457777777611 124566777888899999999998876554221 2589988873
No 4
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.85 E-value=9.7e-21 Score=143.68 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=84.3
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH---HHHhhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA---AEILGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~---~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
|+++|||||++++|+.+.|+|+||+++++|+.++ +.|++|+.... ......++.++++.+ |+.|+++|+++++.+
T Consensus 41 l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~~~~ 118 (487)
T 3n9y_A 41 NFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALNQEV 118 (487)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHHHHH
T ss_pred HHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHccccCCCccCC-cHHHHHHHHhcCccc
Confidence 4689999999999999999999999999999765 46878775432 122222334677777 999999999999877
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHh
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQL 104 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~ 104 (186)
|+.++++.+.+.+.++++.+++.|.+.
T Consensus 119 fs~~~l~~~~~~i~~~~~~l~~~l~~~ 145 (487)
T 3n9y_A 119 MAPEATKNFLPLLDAVSRDFVSVLHRR 145 (487)
T ss_dssp TSHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHhhhHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999753
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.85 E-value=2.1e-20 Score=141.64 Aligned_cols=172 Identities=15% Similarity=0.140 Sum_probs=118.3
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchh---HHHHhhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL---AAEILGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~---~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
|+++|||||++++|+.+.|+++||+++++|+.+ ...|.+++... ........+.|+++++ |+.|+++||++++.+
T Consensus 57 l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~-~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~~~f 134 (482)
T 3k9v_A 57 YHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRT-ESAHPQRLEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQKKL 134 (482)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT-CCSSCCCCCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHh-cCCCCCCCCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhhHHh
Confidence 578999999999999999999999999999986 45787776542 2222222334788877 999999999999986
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------------------------
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------------------------- 126 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 126 (186)
++.+.++.+.+.+.++++.+++.+.+... ..+.++|+.+++..+
T Consensus 135 ~~~~~~~~~~~~i~~~~~~l~~~l~~~~~-----~~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~ 209 (482)
T 3k9v_A 135 MKPVEIMKLDKKINEVLADFLERMDELCD-----ERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITA 209 (482)
T ss_dssp TCHHHHGGGHHHHHHHHHHHHHHHHHHCC-----TTSCCTTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHH
Confidence 68888999999999999999999974321 011245555544443
Q ss_pred ----------ccccc--cccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 127 ----------IHALP--FLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 127 ----------~~~~p--~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
...+| +..+++ ....+...+..+.+.+++.++|++++++.+.+.. .|+++.++
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~----~d~l~~ll 274 (482)
T 3k9v_A 210 IKTMMSTFGKMMVTPVELHKRLN-TKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPG----ADFLCDIY 274 (482)
T ss_dssp HHHHHTTGGGGSSSCHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT----SCHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----hHHHHHHH
Confidence 11111 111221 1223445556677788888999988765543221 47777665
No 6
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.85 E-value=1.6e-20 Score=142.99 Aligned_cols=174 Identities=18% Similarity=0.204 Sum_probs=121.4
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchh-HHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-AAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++||||+++++|+.+.|+++||+++++++.+ ..|++++... .....+.++.+++++.+|+.|+++|+++++. |+
T Consensus 77 ~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~-f~ 153 (503)
T 3s79_A 77 YNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKA-LS 153 (503)
T ss_dssp HHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHH-TS
T ss_pred HHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHh-hC
Confidence 468999999999999999999999999999953 4677776543 3333433344676666599999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------c
Q 038677 80 NYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS--------------------------------I 127 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~ 127 (186)
...++.+.+.+.+++..+++.+.+.. +.+..+|+.+.+..+ .
T Consensus 154 ~~~l~~~~~~~~~~~~~~l~~l~~~~------~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 227 (503)
T 3s79_A 154 GPGLVRMVTVCAESLKTHLDRLEEVT------NESGYVDVLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQAL 227 (503)
T ss_dssp THHHHHHHHHHHHHHHHHHTTGGGTB------CTTSCBCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCeEcHHHHHHHHHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999998886321 111245555544443 0
Q ss_pred cccc-cccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 128 HALP-FLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 128 ~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...| ++..++ ...++..+..+.+.+++.++|+++++..+.+.......|+++.|++
T Consensus 228 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 284 (503)
T 3s79_A 228 LIKPDIFFKIS--WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELIL 284 (503)
T ss_dssp TTCCHHHHHSG--GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHH
T ss_pred hcCcHHHhhcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHH
Confidence 0001 111111 2235677788899999999999998876543222122489998873
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.84 E-value=6.4e-21 Score=144.26 Aligned_cols=167 Identities=21% Similarity=0.314 Sum_probs=119.4
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++|||||++++|+.+.|+|+||+++++|+.++...|++++.......+.++ ++++++ |+.|+++|+++.+. |+.
T Consensus 39 ~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~~~~--~l~~~~-g~~w~~~Rr~~~~~-l~~ 114 (476)
T 3e6i_A 39 LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDR--GIIFNN-GPTWKDIRRFSLTT-LRN 114 (476)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGGGTTS--SSTTCC-STTHHHHHHHHHHH-HHH
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhheecCC--CEEecC-CcHHHHHHHHHHHH-HHh
Confidence 57899999999999999999999999999999887788887765544333333 688888 99999999998877 454
Q ss_pred HHH--HHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 81 YRL--EKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 81 ~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
..+ ..+.+.+.++++.+++.+.... + .++|+.+.+..+
T Consensus 115 ~~~~~~~~~~~i~~~~~~l~~~l~~~~------~--~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 186 (476)
T 3e6i_A 115 YGMGKQGNESRIQREAHFLLEALRKTQ------G--QPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENF 186 (476)
T ss_dssp TC-CCSHHHHHHHHHHHHHHHHHHTTT------T--SCBCTHHHHTHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHhC------C--CCcChHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 333 3467899999999999996321 1 123332222221
Q ss_pred ----------ccccc-cccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ----------IHALP-FLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ----------~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.+| ++.++| +..++..+..+.+.+++.+.|+++++..+.+.. +|+++.|+.
T Consensus 187 ~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~d~~~~ll~ 250 (476)
T 3e6i_A 187 HLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCP----RDLTDCLLV 250 (476)
T ss_dssp HHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTSC----CSHHHHHHH
T ss_pred HHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC----ccHHHHHHH
Confidence 13345 455554 455677788889999999999998876554332 488887763
No 8
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.84 E-value=2.3e-20 Score=141.66 Aligned_cols=170 Identities=18% Similarity=0.284 Sum_probs=118.7
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++|+.+.|+|+||+++++|+.++...|++++.......+..+ .++++..+|+.|+++|+++++. |+.
T Consensus 43 l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~w~~~R~~~~~~-f~~ 120 (481)
T 3czh_A 43 QSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM-GGLLNSRYGRGWVDHRRLAVNS-FRY 120 (481)
T ss_dssp HHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHHHHHTT-CSSTTCCSSHHHHHHHHHHHHH-HHH
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHHhhcCC-CCeEeCCCChHHHHHHHHHHHH-HHH
Confidence 46889999999999999999999999999998776778888755444434333 3555544499999999999988 665
Q ss_pred HHH--HHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 81 YRL--EKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 81 ~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
..+ ..+.+.+.++++.+++.+....+. ++|+.+.+..+
T Consensus 121 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~--------~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 192 (481)
T 3czh_A 121 FGYGQKSFESKILEETKFFNDAIETYKGR--------PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENV 192 (481)
T ss_dssp TTTTSTTHHHHHHHHHHHHHHHHHTTTTC--------CBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHcCCC--------CcCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 433 568899999999999999732100 11111111110
Q ss_pred ----------ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ----------IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ----------~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.+|++.++|. ...++..+....+.+++.++|+++++..+.+. .+|+++.|++
T Consensus 193 ~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll~ 256 (481)
T 3czh_A 193 ELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQL----PQHFVDAYLD 256 (481)
T ss_dssp HHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTC----CSSHHHHHHH
T ss_pred hhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----hHHHHHHHHH
Confidence 234566655552 24556777788899999999999887543322 2489988863
No 9
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=143.32 Aligned_cols=172 Identities=20% Similarity=0.290 Sum_probs=119.7
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeec-cCChhHHHHHHHHHHhh--
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFS-PYDFYWRETHKIATLEL-- 77 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~g~~w~~~Rk~~~~~~-- 77 (186)
|+++||||+++++|+.+.|+++||+++++|+.++...|.+++.......+..+ .+++++ ++|+.|+++|+++++.+
T Consensus 44 l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~~~~-~~l~~~~~~g~~w~~~Rr~~~~~f~~ 122 (495)
T 2hi4_A 44 MSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDG-QSLTFSTDSGPVWAARRRLAQNALNT 122 (495)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTSTTS-CCTTTSSCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHhcCC-CCEEEcCCCChHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999998777778888765444333323 467777 34999999999999873
Q ss_pred cCHHHH---H---HhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------------------
Q 038677 78 LSNYRL---E---KLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------------------- 126 (186)
Q Consensus 78 f~~~~l---~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 126 (186)
|+..++ + .+.+.+.++++.+++.+.+...... ++|+.+.+..+
T Consensus 123 ~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~------~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~ 196 (495)
T 2hi4_A 123 FSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPG------HFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLV 196 (495)
T ss_dssp TTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTS------CBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHH
T ss_pred hccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCC------ccchHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHH
Confidence 333322 1 6899999999999999974221111 12222211111
Q ss_pred ---------------ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 127 ---------------IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 127 ---------------~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
.+++|+++++|. ...++..+..+.+.+++.++|+++++..+.+. .+|+++.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll 264 (495)
T 2hi4_A 197 KNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKTVQEHYQDFDKNS----VRDITGALF 264 (495)
T ss_dssp TTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTC----CCSHHHHHH
T ss_pred HHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----cccHHHHHH
Confidence 234666655541 23456677788899999999999887644332 148998887
No 10
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.84 E-value=3.5e-20 Score=139.59 Aligned_cols=174 Identities=16% Similarity=0.179 Sum_probs=115.8
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH-HHH-hh--CCCCceeeccCChhHHHHHHHHHHh
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA-AEI-LG--YNFSMFGFSPYDFYWRETHKIATLE 76 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~-~~~-~~--~~~~~~~~~~~g~~w~~~Rk~~~~~ 76 (186)
|+++|||||++++|+.+.|+++||+++++|+.+ ..|.+++.... ... ++ ..+.++++..+|+.|+++|+++++.
T Consensus 19 ~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~ 96 (456)
T 3mdm_A 19 WAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLA 96 (456)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHHHHHHhhcccc
Confidence 578999999999999999999999999999953 34544443221 111 11 0123666664499999999999987
Q ss_pred hcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc------------------------------
Q 038677 77 LLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------------------------ 126 (186)
Q Consensus 77 ~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 126 (186)
|+.++++.+.+.+.++++.+++.+....+ .+.++|+.+.+..+
T Consensus 97 -fs~~~l~~~~~~i~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~ 169 (456)
T 3mdm_A 97 -FSRSSLVSLMETFNEKAEQLVEILEAKAD------GQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKL 169 (456)
T ss_dssp -GSHHHHHTTHHHHHHHHHHHHHHHHHTCS------SSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHHH
Confidence 89999999999999999999999973211 11245554444443
Q ss_pred ------ccccccccccCCC-CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ------IHALPFLIWLDIG-GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ------~~~~p~l~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
....|++.++|.. ...+...+....+.+++.++++++++..+.+.. . ..|+++.+++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~-~-~~d~l~~ll~ 233 (456)
T 3mdm_A 170 MLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEE-V-PADILTQILK 233 (456)
T ss_dssp HHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-C-CCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-c-hhhHHHHHHH
Confidence 1112333344410 112344556667788888889888776543321 1 2489988873
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.84 E-value=1.4e-20 Score=142.60 Aligned_cols=168 Identities=16% Similarity=0.270 Sum_probs=119.0
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++|+.+.|+++||+++++|+.++...|++++..........+ .++++++ |+.|+++|+++++. |+.
T Consensus 39 l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~-~~l~~~~-g~~~~~~Rr~~~~~-f~~ 115 (476)
T 2fdv_A 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKG-YGVVFSN-GERAKQLRRFSIAT-LRD 115 (476)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHHTT-CSSSSCC-HHHHHHHHHHHHHH-HHH
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhcCC-CCeEecC-chHHHHHHHHHHHH-HHH
Confidence 46889999999999999999999999999997666778776654433333333 4788887 99999999999988 776
Q ss_pred HHH--HHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 81 YRL--EKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 81 ~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
..+ +.+.+.+.++++.+++.+....+. ++|+.+.+..+
T Consensus 116 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~--------~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 187 (476)
T 2fdv_A 116 FGVGKRGIEERIQEEAGFLIDALRGTGGA--------NIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIF 187 (476)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHHHHTTTC--------CBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHH
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHhcCCC--------ccChHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHH
Confidence 655 789999999999999999632110 11111111111
Q ss_pred ----------cccccc-ccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ----------IHALPF-LIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ----------~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.+|+ ++++| +..++..+..+.+.+++.++|+++++..+++. .+|+++.|++
T Consensus 188 ~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll~ 251 (476)
T 2fdv_A 188 QFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNS----PRDFIDSFLI 251 (476)
T ss_dssp HHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTS----CCSHHHHHHH
T ss_pred HhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CccHHHHHHH
Confidence 124454 44444 44566777888899999999999887543322 2489988763
No 12
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.83 E-value=2.3e-20 Score=140.21 Aligned_cols=170 Identities=14% Similarity=0.121 Sum_probs=123.0
Q ss_pred CccccC-CeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG-~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++|| |||++++|+.+.|+|+||+++++++.++...|++++.........+. ++++..+|+.|+++|+++++. |+
T Consensus 32 ~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~R~~~~~~-f~ 108 (450)
T 3gw9_A 32 CKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE--GVAYAAPYPRMREQLNFLAEE-LT 108 (450)
T ss_dssp HHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHHHHCT--TSGGGSCHHHHHHHHHHHHHT-TS
T ss_pred HHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHHHhcC--CcccCCCcHHHHHHHHHHHHH-Hh
Confidence 468999 99999999999999999999999998877788887665443333222 566554499999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHH-HHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 80 NYRLEKLKHVREYELKTCLK-ELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
..+++.+.+.+.++++.+++ .+. ... ..+|+.+++..+
T Consensus 109 ~~~l~~~~~~i~~~~~~ll~~~~~------~~~---~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~ 179 (450)
T 3gw9_A 109 IAKFQNFVPAIQHEVRKFMAANWD------KDE---GEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMES 179 (450)
T ss_dssp GGGCTTHHHHHHHHHHHHHHHHSC------SSE---EEEEHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc------cCC---CcccHHHHHHHHHHHHHHHHHcCcchhhhhhhHHHHHHHHHHHh
Confidence 99999999999999999998 553 111 123333322221
Q ss_pred -----ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 -----IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 -----~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..++|++.++|. ...++..++.+.+.+++.++|+++++...... .. ..|+++.|++
T Consensus 180 ~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~-~~d~l~~ll~ 240 (450)
T 3gw9_A 180 SLIPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEVNKD-SS-TSDLLSGLLS 240 (450)
T ss_dssp TCCGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CC-CCSHHHHHHH
T ss_pred ccccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccC-Cc-cchHHHHHHH
Confidence 345677777762 34556677888899999999998876432111 11 2599998874
No 13
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.82 E-value=3.8e-20 Score=139.70 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=82.3
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++|||||++++|+++.|+|+||+++++|+.++...|+.++.+........| .+++++.+|+.|+.+|+++.+. |+.
T Consensus 40 ~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~R~~~~~~-f~~ 117 (461)
T 3ld6_A 40 AYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFG-KGVAYDVPNPVFLEQKKMLKSG-LNI 117 (461)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHC-TTSGGGSCHHHHHHHHHHHHHH-SSH
T ss_pred HHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhccCC-CccccCCCcHHHHHHHHhcccc-ccH
Confidence 46899999999999999999999999999998887778777655333222223 2566554499999999999987 899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHH
Q 038677 81 YRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
..++.+.+.+.++++.+++.|.
T Consensus 118 ~~l~~~~~~i~~~~~~~~~~~~ 139 (461)
T 3ld6_A 118 AHFKQHVSIIEKETKEYFESWG 139 (461)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGC
T ss_pred HHHhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999988875
No 14
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.82 E-value=3.5e-20 Score=140.44 Aligned_cols=167 Identities=17% Similarity=0.287 Sum_probs=116.4
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++|+.+.|+|+||+++++|+.++...|.+++..........+ .++++++ |+.|+++|+++++. |+.
T Consensus 39 l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~-~~l~~~~-g~~w~~~Rr~~~~~-f~~ 115 (476)
T 1po5_A 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG-YGVIFAN-GERWRALRRFSLAT-MRD 115 (476)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCCSS-CCCCCSS-HHHHHHHHHHHHHH-HHH
T ss_pred HHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhcCC-CceEecC-CcHHHHHHHHHHHH-HHH
Confidence 46899999999999999999999999999997766778776644322222223 4788887 99999999999987 666
Q ss_pred H--HHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 81 Y--RLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 81 ~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
. .++.+.+.+.++++.+++.+....+. ++|+.+.+..+
T Consensus 116 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~--------~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 187 (476)
T 1po5_A 116 FGMGKRSVEERIQEEARCLVEELRKSKGA--------LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187 (476)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHTTTC--------CBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHT
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHhcCCC--------ccCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 5 45778999999999999999642110 11111111111
Q ss_pred ----------cccccc-ccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 127 ----------IHALPF-LIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 127 ----------~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
...+|+ ++++| ...++..+..+.+.+++.++|+++++..+.+. .+|+++.|+
T Consensus 188 ~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll 250 (476)
T 1po5_A 188 SLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSVEKHRATLDPSN----PRDFIDVYL 250 (476)
T ss_dssp TTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCTTS----CCSHHHHHH
T ss_pred hhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----cccHHHHHH
Confidence 113443 33443 44466777888899999999999887543322 148988876
No 15
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.81 E-value=1.7e-20 Score=142.34 Aligned_cols=98 Identities=16% Similarity=0.277 Sum_probs=82.7
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhc-cccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTH-DKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++|||||++++|+.+.|+|+||+++++|+.++ ...|.+++........ + .++++.+ |+.|+++|+++++. |+
T Consensus 42 ~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~~--~-~~l~~~~-g~~w~~~R~~~~~~-fs 116 (485)
T 3nxu_A 42 CHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM--K-SAISIAE-DEEWKRLRSLLSPT-FT 116 (485)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGGG--G-GSTTTCC-HHHHHHHHHHHGGG-GC
T ss_pred HHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccccc--c-cCccccC-CcHHHHHHhhcChh-cC
Confidence 5789999999999999999999999999999876 5677777654322222 1 3577777 99999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKELYQ 103 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~~ 103 (186)
.++++.+.+.+.++++.+++.+.+
T Consensus 117 ~~~l~~~~~~i~~~~~~l~~~l~~ 140 (485)
T 3nxu_A 117 SGKLKEMVPIIAQYGDVLVRNLRR 140 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999964
No 16
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.80 E-value=6.8e-20 Score=138.84 Aligned_cols=167 Identities=19% Similarity=0.285 Sum_probs=113.1
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++|+.+.|+|+||+++++|+.++...|.+++..........+ .++++++ |+.|+++|+++.+. |+.
T Consensus 40 l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~-~~l~~~~-g~~w~~~Rr~~~~~-~~~ 116 (477)
T 1r9o_A 40 LSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRG-FGIVFSN-GKKWKEIRRFSLMT-LRN 116 (477)
T ss_dssp HHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTTCT-TSSTTCC-HHHHHHHHHHHHHH-HTT
T ss_pred HHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhccCC-CceEecC-ChHHHHHHHHHHHH-HHH
Confidence 46789999999999989999999999999997666677766543222112223 3677777 99999999999987 676
Q ss_pred H--HHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------------------------
Q 038677 81 Y--RLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------------------------- 126 (186)
Q Consensus 81 ~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 126 (186)
. .++.+.+.+.++++.+++.+....+ .++|+.+.+..+
T Consensus 117 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~--------~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 188 (477)
T 1r9o_A 117 FGMGKRSIEDRVQEEARCLVEELRKTKA--------SPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENI 188 (477)
T ss_dssp SSSCSSCHHHHHHHHHHHHHHHHHTTTT--------SCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHhcCC--------CccChHHHHHHHHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHH
Confidence 5 3467899999999999999973210 011211111111
Q ss_pred ----------cccccc-ccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 127 ----------IHALPF-LIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 127 ----------~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
...+|+ ++++| ...++..+....+.+++.++|+++++..+.+. ..|+++.|+
T Consensus 189 ~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll 251 (477)
T 1r9o_A 189 KILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILEKVKEHQESMDMNN----PQDFIDCFL 251 (477)
T ss_dssp HHHTCCBC-------CCCSCCT--TCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTC----CCSHHHHHH
T ss_pred HhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC----chHHHHHHH
Confidence 123443 33333 34466777788899999999999887543322 148988876
No 17
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.77 E-value=1.3e-18 Score=131.68 Aligned_cols=101 Identities=22% Similarity=0.379 Sum_probs=78.2
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCC--CCceeeccCChhHHHHHHHHHHhhc
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYN--FSMFGFSPYDFYWRETHKIATLELL 78 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~--~~~~~~~~~g~~w~~~Rk~~~~~~f 78 (186)
|+++|||||++++|+.++|+|+||+++++||.+++..|++|+.......+..+ +.+++++++|+.|+.+|+++.+. |
T Consensus 39 ~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~ 117 (479)
T 3tbg_A 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVST-L 117 (479)
T ss_dssp HHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHH-H
T ss_pred HHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHH-h
Confidence 57899999999999999999999999999999888899999876655444322 23566666699999999999987 5
Q ss_pred CHHHHH--HhHHHHHHHHHHHHHHHH
Q 038677 79 SNYRLE--KLKHVREYELKTCLKELY 102 (186)
Q Consensus 79 ~~~~l~--~~~~~~~~~~~~l~~~l~ 102 (186)
+...+. .+.+.+......+...+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 143 (479)
T 3tbg_A 118 RNLGLGKKSLEQWVTEEAACLCAAFA 143 (479)
T ss_dssp HHTTSTTCHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 555442 355666666666666665
No 18
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.75 E-value=9.9e-18 Score=126.86 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=109.9
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH--HHHhhCCCCceeec-cCChhHHHHHHHHHHhh
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA--AEILGYNFSMFGFS-PYDFYWRETHKIATLEL 77 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~--~~~~~~~~~~~~~~-~~g~~w~~~Rk~~~~~~ 77 (186)
|+++||||+++++++.+.|+|+||+++++|+.+ ..|...+.... ..... + .+++++ .+|+.|+++|+++++.
T Consensus 32 ~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~~~~~~~~~~~-~-~~l~~~~~~g~~w~~~Rr~~~~~- 106 (470)
T 2ij2_A 32 IADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLSQALKFVRDFA-G-DGLFTSWTHEKNWKKAHNILLPS- 106 (470)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCCHHHHHHHHHH-T-TSGGGSCTTSHHHHHHHHHHGGG-
T ss_pred HHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCchhHHHHHHHhc-C-CceEEcCCCchHHHHHHHHhccc-
Confidence 468999999999999999999999999999953 23533222111 11112 2 357766 3499999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------c-----------------
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------I----------------- 127 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----------------- 127 (186)
|+..+++.+.+.+.++++.+++.+... .. +..+|+.+.+..+ .
T Consensus 107 fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~--~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 179 (470)
T 2ij2_A 107 FSQQAMKGYHAMMVDIAVQLVQKWERL-----NA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVR 179 (470)
T ss_dssp GSTTTHHHHHHHHHHHHHHHHHHHHTC-----CT--TCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhh-----CC--CCeEEHHHHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHH
Confidence 899999999999999999999998621 11 1234554444432 0
Q ss_pred --------cc-cccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 128 --------HA-LPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 128 --------~~-~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.. .|++.+++ ....+++.+..+.+.+++.++|+++++.. +. ..|+++.|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~----~~dll~~ll~ 239 (470)
T 2ij2_A 180 ALDEAMNKLQRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKASG--EQ----SDDLLTHMLN 239 (470)
T ss_dssp HHHHHHHTC---CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CC----CSSHHHHHHH
T ss_pred HHHHHHHHHhhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhcc--cC----chhHHHHHHh
Confidence 00 01121221 01234455667788899999998887642 11 1489988874
No 19
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.75 E-value=1.2e-17 Score=123.26 Aligned_cols=163 Identities=12% Similarity=0.061 Sum_probs=111.6
Q ss_pred cccCCeeEEeeCC----eeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhc
Q 038677 3 DKYGPIFTIKMGI----NRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELL 78 (186)
Q Consensus 3 ~~yG~i~~~~~~~----~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f 78 (186)
++||||+++++++ .+.++|+||+++++|+ ++...|++++..........++.++++.+ |+.|+++|+++++. |
T Consensus 22 r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~R~~~~~~-f 98 (384)
T 3oo3_A 22 QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYD-PPDHTRLRRTVAPA-Y 98 (384)
T ss_dssp HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGCC-TTHHHHHHHHHGGG-G
T ss_pred HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccCC-ChhHHHHHHHHHHh-h
Confidence 4899999999886 8999999999999999 45577888876543322222223455556 99999999999987 8
Q ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------c----cccccccccCCCCc
Q 038677 79 SNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------I----HALPFLIWLDIGGD 141 (186)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~p~l~~l~~~~~ 141 (186)
+.++++.+.+.+.+.++.+++.|.+ .+ .++|+.+.+... . .+..++..+.....
T Consensus 99 s~~~l~~~~~~i~~~~~~l~~~l~~------~~---~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 169 (384)
T 3oo3_A 99 SARRMERLRPRIEEIVEECLDDFES------VG---APVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESRESRL 169 (384)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH------SC---SSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh------cC---CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999962 11 145555554442 0 01111111100123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 142 ERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~d~l~~ll~ 205 (384)
T 3oo3_A 170 PRQRTLSGLGIVNYTKRLTSGKRRDP--------GDGMIGVIVR 205 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 45667778888999999998876521 1488888764
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.74 E-value=6.6e-18 Score=127.41 Aligned_cols=163 Identities=13% Similarity=0.169 Sum_probs=111.7
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH-HHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA-AEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++|||||++++++.+.|+|++|+++++++.++...+..++.+.. ...+. | .++++..+|+.|+.+|+++.+. |+
T Consensus 40 ~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-g-~g~~~~~~g~~w~~~Rr~~~~~-f~ 116 (461)
T 3i3k_A 40 AYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVF-G-KGVAYDVPNPVFLEQKKMLKSG-LN 116 (461)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHH-C-TTSGGGSCHHHHHHHHHHHHHH-SS
T ss_pred HHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhhhhc-C-CeeeeCCCcHHHHHHHHHHhhh-hC
Confidence 4689999999999999999999999999999877665654433321 12222 2 3566665599999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc---------------------------------
Q 038677 80 NYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS--------------------------------- 126 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 126 (186)
...++.+.+.+.+++..+++.|.+ .+ .+|+.+.+..+
T Consensus 117 ~~~l~~~~~~~~~~~~~ll~~l~~------~~----~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 186 (461)
T 3i3k_A 117 IAHFKQHVSIIEKETKEYFESWGE------SG----EKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGF 186 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGCS------EE----EEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh------cC----CcCHHHHHHHHHHHHHHHHHccHhhhhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988851 11 12222222111
Q ss_pred ---ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ---IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ---~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...+| .++|. ...++..+..+.+.+++.+.|+++++..+. ..|+++.|++
T Consensus 187 ~~~~~~~P--~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~d~l~~ll~ 239 (461)
T 3i3k_A 187 SHAAWLLP--GWLPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQEK------IDDILQTLLD 239 (461)
T ss_dssp SHHHHHSC--TTSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC------CCSHHHHHHT
T ss_pred ccchhhcc--cccCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cccHHHHHHH
Confidence 01112 12221 234566777888899999999888664321 1488888874
No 21
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.72 E-value=8.3e-17 Score=120.97 Aligned_cols=162 Identities=14% Similarity=0.089 Sum_probs=111.5
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++|||++++++++.+.|+++||+++++|+.++...|+.+........++ . .++++++ |+.|+++|+++++. |+.
T Consensus 39 ~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g-~-~~l~~~~-g~~~~~~R~~~~~~-f~~ 114 (444)
T 2ve3_A 39 RQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLG-P-NALATQM-GEIHRSRRKILYQA-FLP 114 (444)
T ss_dssp HHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHHHHC-T-TSGGGCC-HHHHHHHHHHHHGG-GCH
T ss_pred HHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHHHhC-c-cccccCC-chHHHHHHHHHHhh-cCH
Confidence 367899999999888889999999999999976655565432222222232 2 3677777 99999999999987 899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc----------c--------------------ccc
Q 038677 81 YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS----------I--------------------HAL 130 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~--------------------~~~ 130 (186)
++++.+.+.+.++++.+++.|.. .. ++|+.+.+..+ . ..+
T Consensus 115 ~~l~~~~~~i~~~~~~l~~~l~~------~~----~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
T 2ve3_A 115 RTLDSYLPKMDGIVQGYLEQWGK------AN----EVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSL 184 (444)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHH------SS----EEEHHHHHHHHHHHHHHHHHTCHHHHSCTTHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------CC----cEeHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999852 11 23333322222 0 001
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 131 PFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 131 p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
|. .+|. ...++..++...+.+++.++|++++++. .. ..|+++.|++
T Consensus 185 ~~--~~p~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~----~~d~l~~ll~ 230 (444)
T 2ve3_A 185 PI--PLPN-TLFGKSQRARALLLAELEKIIKARQQQP--PS----EEDALGILLA 230 (444)
T ss_dssp CC--CSTT-SHHHHHHHHHHHHHHHHHHHHHHHHTSC--CC----CSSHHHHHHH
T ss_pred Cc--cCCC-cHHHHHHHHHHHHHHHHHHHHHHHhcCC--CC----ccCHHHHHHh
Confidence 11 1221 1234566777888999999999887641 11 2488888874
No 22
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.71 E-value=7.4e-18 Score=127.39 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=88.1
Q ss_pred ccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCC-chhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 2 ADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRP-KTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 2 ~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
++ ||||+++++|+.+.++|+||+++++|+.++ .|..++ .+.......+ ..++++.+ |+.|+++|+++++. |+.
T Consensus 52 ~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~~g-~~~l~~~d-g~~h~~~R~~l~~~-fs~ 125 (467)
T 3dbg_A 52 RD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGLLG-KEGVATAN-GPLHRRQRRTIQPA-FRL 125 (467)
T ss_dssp GG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------------------------------CGGGHHH-HST
T ss_pred HH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHhcC-CCCcccCC-cHHHHHHHHHhhhh-hCH
Confidence 45 999999999999999999999999999765 553333 2222222222 13677777 99999999999987 899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc----------------------------------
Q 038677 81 YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS---------------------------------- 126 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 126 (186)
++++.+.+.+.++++.+++.|.. .. ++|+.+.+..+
T Consensus 126 ~~l~~~~~~i~~~~~~l~~~l~~------~~----~~d~~~~~~~~~~~vi~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 195 (467)
T 3dbg_A 126 DAIPAYGPIMEEEAHALTERWQP------GK----TVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMY 195 (467)
T ss_dssp TTSTTTHHHHHHHHHHHHHHSCT------TS----CEEHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc------CC----cCcHHHHHHHHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999998851 11 23333322221
Q ss_pred -cccccc--ccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 -IHALPF--LIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 -~~~~p~--l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...+|+ +.++|. ...+++.+....+.+++.++|+++++... . ..|+++.|++
T Consensus 196 ~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--~----~~dll~~ll~ 250 (467)
T 3dbg_A 196 RRMVVPLGPLYRLPL-PANRRFNDALADLHLLVDEIIAERRASGQ--K----PDDLLTALLE 250 (467)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHHTTCCS--S----CCSHHHHHTT
T ss_pred HHhccchhhhhhCCC-hHhHHHHHHHHHHHHHHHHHHHHHHhcCC--C----chHHHHHHHh
Confidence 122231 222321 22345566677888999999988776421 1 2489988875
No 23
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.71 E-value=5.2e-17 Score=122.45 Aligned_cols=167 Identities=8% Similarity=0.042 Sum_probs=95.5
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++||||+++++++.+.++|+||+++++|+.++...|+.++.+....... + .+++ .+ |+.|+++|+++++. |+.
T Consensus 33 l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~-g-~~~~-~~-~~~~~~~R~~~~~~-f~~ 107 (455)
T 2cib_A 33 VRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF-G-EGVV-FD-ASPERRKEMLHNAA-LRG 107 (455)
T ss_dssp HHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH-C------------------------CCH
T ss_pred HHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc-C-Cccc-cC-cHHHHHHHhhhccc-cCH
Confidence 468899999999999999999999999999986656677765443222222 2 2443 56 99999999999987 899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc------------------------------cccc
Q 038677 81 YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------------------------IHAL 130 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~ 130 (186)
++++.+.+.+.++++.+++.|.. . ..+|+.+++..+ ....
T Consensus 108 ~~l~~~~~~i~~~~~~l~~~~~~------~----~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 177 (455)
T 2cib_A 108 EQMKGHAATIEDQVRRMIADWGE------A----GEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTD 177 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCS------E----EEEEHHHHHHHHHHHHHHHHHTCHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC------C----CcEeHHHHHHHHHHHHHHHHHcCCCcchhhhHHHHHHHHHHHhhhh
Confidence 99999999999999999887641 1 123333333322 0011
Q ss_pred ccccccC-CC-CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 131 PFLIWLD-IG-GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 131 p~l~~l~-~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
++...+| ++ ...++..++...+.+++.++|+++++....... .+|+++.|++
T Consensus 178 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~---~~dll~~ll~ 231 (455)
T 2cib_A 178 PLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS---DRDMLDVLIA 231 (455)
T ss_dssp GGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CCCHHHHHHH
T ss_pred HHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC---cccHHHHHHH
Confidence 1111112 11 123455667778899999999988765332111 1389988874
No 24
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.68 E-value=8.5e-16 Score=114.17 Aligned_cols=158 Identities=11% Similarity=0.054 Sum_probs=109.0
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch-------hHHHHhhCCCCceeeccCChhHHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-------LAAEILGYNFSMFGFSPYDFYWRETHKIATL 75 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~-------~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~ 75 (186)
++||||+++++++.+.+++++|+.+++++.++ ..|++++.. ......+ .++++.+ |+.|+++|+++++
T Consensus 23 r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~-g~~h~~~Rr~~~~ 97 (404)
T 3ejb_B 23 RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN---QMMLFQN-QPDHRRLRTLASG 97 (404)
T ss_dssp HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH---TSGGGCC-TTHHHHHHHHHHG
T ss_pred HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh---cchhhcC-CchHHHHHHHHHh
Confidence 57999999999999999999999999999865 677777641 1122222 3677777 9999999999998
Q ss_pred hhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c----------------cccccccc----
Q 038677 76 ELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S----------------IHALPFLI---- 134 (186)
Q Consensus 76 ~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~p~l~---- 134 (186)
. |+.++++.+.+.+.++++.+++.|.+ .+ .+|+...+.. + ..+..+..
T Consensus 98 ~-fs~~~l~~~~~~i~~~~~~ll~~l~~------~~----~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 166 (404)
T 3ejb_B 98 A-FTPRTTESYQPYIIETVHHLLDQVQG------KK----KMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQ 166 (404)
T ss_dssp G-GSHHHHHTTHHHHHHHHHHHHHTTTT------TS----EEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHG
T ss_pred h-cCHHHHHHHHHHHHHHHHHHHHHhhh------cC----CcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 7 89999999999999999999999861 11 2333222111 0 00000110
Q ss_pred --ccCCC-CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 135 --WLDIG-GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 135 --~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
..|.. ...++..+....+.+++.++|+++++.. ..|+++.|+
T Consensus 167 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll 211 (404)
T 3ejb_B 167 TIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHP--------QQDMISMLL 211 (404)
T ss_dssp GGSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHH
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------cchHHHHHH
Confidence 01211 1234566777888899999998887421 148888776
No 25
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.67 E-value=9.6e-16 Score=114.72 Aligned_cols=97 Identities=7% Similarity=0.039 Sum_probs=78.0
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCc-hhH---HH---H---hhC---CCCceeeccCChhHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK-TLA---AE---I---LGY---NFSMFGFSPYDFYWRE 68 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~-~~~---~~---~---~~~---~~~~~~~~~~g~~w~~ 68 (186)
.+||||+++++ |+.+.++|++++.+++++.+ ...|++++. ... .. . .+. ...++++++ |+.|++
T Consensus 35 ~~~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~ 112 (428)
T 1cpt_A 35 RDEQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTA 112 (428)
T ss_dssp HHHCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHH
T ss_pred HHhCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCccccccCCcccccchhccccccccccccccccCC-hHHHHH
Confidence 34899999998 67899999999999999964 456887765 221 11 2 221 123677777 999999
Q ss_pred HHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 69 THKIATLELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 69 ~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
+|+++++. |+.++++.+.+.+.++++.+++.+.
T Consensus 113 ~Rr~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~ 145 (428)
T 1cpt_A 113 YRGLTLNW-FQPASIRKLEENIRRIAQASVQRLL 145 (428)
T ss_dssp HHHHHHTT-SSHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhh-hCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 8999999999999999999999997
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.67 E-value=2.7e-16 Score=117.94 Aligned_cols=161 Identities=13% Similarity=0.104 Sum_probs=108.9
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCchhHHHH----hhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEI----LGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~----~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
++||||+++++ ++.+.|+++||+++++|+.++ .|++++....... ...+ .++++.+ |+.|+++|+++++.
T Consensus 56 ~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~-~~l~~~d-g~~h~~~R~~~~~~- 130 (436)
T 2cd8_A 56 RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEAEAALN-HNMLESD-PPRHTRLRKLVARE- 130 (436)
T ss_dssp HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTTGGGTC-CSGGGCC-TTHHHHHHHHHGGG-
T ss_pred HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccccccccccc-ccccccC-chHHHHHHHHhHHh-
Confidence 68999999998 778899999999999999765 5766653211110 1122 3677777 99999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c-----cccc-----------cccccc-CCC
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S-----IHAL-----------PFLIWL-DIG 139 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~-----------p~l~~l-~~~ 139 (186)
|+.++++.+.+.+.++++.+++.|.+ .. +.++|+.+++.. + ...| .+...+ ...
T Consensus 131 fs~~~l~~~~~~i~~~~~~l~~~l~~------~~--~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~ 202 (436)
T 2cd8_A 131 FTMRRVELLRPRVQEIVDGLVDAMLA------AP--DGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPD 202 (436)
T ss_dssp SSHHHHHTTHHHHHHHHHHHHHHHHT------CT--TSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCS
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHh------cc--CCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999972 11 114555554432 1 0000 010000 000
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 140 GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 203 -~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 239 (436)
T 2cd8_A 203 -DPAQAQTAMAEMSGYLSRLIDSKRGQD--------GEDLLSALVR 239 (436)
T ss_dssp -STTHHHHHHHHHHHHHHHHHHHHTTSC--------CCSHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCHHHHHHH
Confidence 113455677788889999998876531 1488888763
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.67 E-value=1.1e-15 Score=114.05 Aligned_cols=166 Identities=9% Similarity=0.017 Sum_probs=109.8
Q ss_pred CccccC-CeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchh--HHHHhhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 1 MADKYG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AAEILGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 1 ~~~~yG-~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
|+++|| ||+++++++.+.+++++|++++.++ + ...|..++... ....+. |..++++++ |+.|+++|+++++.
T Consensus 28 l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~-g~~~l~~~d-g~~h~~~R~~~~~~- 102 (417)
T 1izo_A 28 RTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLF-GVNAIQGMD-GSAHIHRKMLFLSL- 102 (417)
T ss_dssp HHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTT-CTTCGGGCC-HHHHHHHHHHHHHT-
T ss_pred HHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhc-cccceeecC-ChHHHHHHHHhhhh-
Confidence 357898 9999999899999999999998554 2 33454443221 222122 223577777 99999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc------------cc---ccccc-------cc
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------IH---ALPFL-------IW 135 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~---~~p~l-------~~ 135 (186)
|+.++++.+.+.+.+.++.+++.|. ..+ ++|+.+.+..+ .. ...+. ..
T Consensus 103 f~~~~l~~~~~~i~~~~~~l~~~l~------~~~----~~dl~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~ 172 (417)
T 1izo_A 103 MTPPHQKRLAELMTEEWKAAVTRWE------KAD----EVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDA 172 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHT------TSS----EEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHh------cCC----CeeHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhh
Confidence 8999999999999999999999996 211 34554444333 00 00010 00
Q ss_pred cC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 136 LD-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 136 l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+. +.+..++..++.+.+.+++.++|+++++...... ..|+++.|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll~ 219 (417)
T 1izo_A 173 FGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTT----SGTALHEMAF 219 (417)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCC----TTSHHHHHHH
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHhhccCCC----cCCHHHHHHH
Confidence 10 1122345567778889999999999887542211 2488888764
No 28
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.66 E-value=3.9e-17 Score=121.15 Aligned_cols=173 Identities=12% Similarity=0.045 Sum_probs=109.1
Q ss_pred Ccccc--CCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhc
Q 038677 1 MADKY--GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELL 78 (186)
Q Consensus 1 ~~~~y--G~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f 78 (186)
|+++| |||+++++++ +.++|+||+++++|+ ++...|++++..........+..++++.+ |+.|+++|+++++. |
T Consensus 28 l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~R~~~~~~-f 103 (398)
T 4fb2_A 28 LRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQD-DPVHKKYRQLVAKP-F 103 (398)
T ss_dssp HHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTCC-TTHHHHHHHHHHTT-T
T ss_pred HHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccCC-chHHHHHHHHHHHh-h
Confidence 46889 9999999876 589999999999999 45567877765432111122223455666 99999999999987 8
Q ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHhhccC--CCCCcchhHhHHHH-Hhhc----ccccccccccCCCCcHHHHHHHHHH
Q 038677 79 SNYRLEKLKHVREYELKTCLKELYQLWDNN--KSTNKMLLVEMKRW-LADS----IHALPFLIWLDIGGDERSMKKIAKE 151 (186)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~-~~~~----~~~~p~l~~l~~~~~~~~~~~~~~~ 151 (186)
+.++++.+.+.+.++++.+++.|.....-. ..-....+.++... +..- ..+..++..+..+....+..+....
T Consensus 104 ~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (398)
T 4fb2_A 104 SPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAILLGLPPEDGDTYRRWVWAITHVENPEEGAEIFAE 183 (398)
T ss_dssp CHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHHHTTSCGGGHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999999999999999886211000 00000112222111 1000 0011111111001223466778888
Q ss_pred HHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 152 LDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 152 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+.+++.++|+++++.. ..|+++.|++
T Consensus 184 ~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 209 (398)
T 4fb2_A 184 LVAHARTLIAERRTNP--------GNDIMSRVIM 209 (398)
T ss_dssp HHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 9999999999887631 1488888874
No 29
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.66 E-value=6e-16 Score=115.01 Aligned_cols=162 Identities=11% Similarity=0.138 Sum_probs=108.7
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCc--h-hHHHHhhC--CCCceeeccCChhHHHHHHHHHHh
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK--T-LAAEILGY--NFSMFGFSPYDFYWRETHKIATLE 76 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~--~-~~~~~~~~--~~~~~~~~~~g~~w~~~Rk~~~~~ 76 (186)
++||||+++++ |+.+.+++++|+++++|+.+. .|++++. . .....+.. ++.++++++ |+.|+++|+++++.
T Consensus 29 ~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~ 105 (403)
T 3aba_A 29 RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD-EPEHTSDRKLLAKE 105 (403)
T ss_dssp HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC-TTHHHHHHHHHHHH
T ss_pred HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC-chhHHHHHHHHHhh
Confidence 68999999997 889999999999999999753 4666642 1 11000111 224677777 99999999999987
Q ss_pred hcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------c----ccccccccc-CC
Q 038677 77 LLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------I----HALPFLIWL-DI 138 (186)
Q Consensus 77 ~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~----~~~p~l~~l-~~ 138 (186)
|+.+.++.+.+.+.++++.+++.|.. .+ .++|+...+.. + . .+..+...+ ..
T Consensus 106 -fs~~~l~~~~~~i~~~~~~ll~~l~~------~~---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~ 175 (403)
T 3aba_A 106 -FTVRRMQALRPNIQRIVDEHLDAIEA------RG---GPVDLVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAMMRV 175 (403)
T ss_dssp -SCHHHHHTTHHHHHHHHHHHHHHHHH------HC---SCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHSBS
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHh------cC---CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999972 01 13444333221 1 0 000111111 00
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 139 GGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
....++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 176 ~~~p~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 214 (403)
T 3aba_A 176 DQDAAATEAAGMRLGGLLYQLVQERRANP--------GDDLISALIT 214 (403)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHT
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHh
Confidence 01125566777888999999998887631 1488888774
No 30
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.66 E-value=6.2e-16 Score=115.41 Aligned_cols=162 Identities=9% Similarity=0.038 Sum_probs=108.5
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCch-hHHHHhhC--CCCceeeccCChhHHHHHHHHHHhhc
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKT-LAAEILGY--NFSMFGFSPYDFYWRETHKIATLELL 78 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~-~~~~~~~~--~~~~~~~~~~g~~w~~~Rk~~~~~~f 78 (186)
++||||+++++ |+.+.++|+||+++++|+.++ .|.+++.. .....+.. ++.++++.+ |+.|+++|+++++. |
T Consensus 47 ~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~l~~~-f 122 (417)
T 2y5n_A 47 QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPEHSRLRRLVVKA-F 122 (417)
T ss_dssp HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTHHHHHHHHHHHH-S
T ss_pred HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chHHHHHHHHHhhh-c
Confidence 68999999997 789999999999999999753 46555432 11100111 234677777 99999999999987 8
Q ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------c----cccccccccC--CC
Q 038677 79 SNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------I----HALPFLIWLD--IG 139 (186)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~----~~~p~l~~l~--~~ 139 (186)
+.+.++.+.+.+.++++.+++.|... . .++|+...+.. + . .+..+...+. ..
T Consensus 123 s~~~l~~~~~~i~~~~~~ll~~l~~~----~-----~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T 2y5n_A 123 TARRAESLRPRAREIAHELVDQMAAT----G-----QPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAE 193 (417)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHHHHH----C-----SSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTSTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC----C-----CCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999621 0 02333322221 1 0 0001111110 01
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 140 GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~dll~~ll~ 231 (417)
T 2y5n_A 194 VTAEEMQEAAEQAYAYMGDLIDRRRKEP--------TDDLVSALVQ 231 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHh
Confidence 1235667778888999999999887631 1488888764
No 31
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.66 E-value=5.8e-16 Score=115.67 Aligned_cols=160 Identities=10% Similarity=-0.062 Sum_probs=107.5
Q ss_pred cccC-CeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHH
Q 038677 3 DKYG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNY 81 (186)
Q Consensus 3 ~~yG-~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~ 81 (186)
+++| ||+++..++ +.++|+||+.+++|+ ++...|++++..........++.++++.+ |+.|+++|+++++. |+.+
T Consensus 49 ~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~R~~~~~~-fs~~ 124 (421)
T 3lxh_A 49 QPDTPPLVWTPFTG-GHWIATRGTLIDEIY-RSPERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPYRKAIDKG-LNLA 124 (421)
T ss_dssp CTTCCSEEEESSTT-SEEEECSHHHHHHHH-TCTTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHHHHHHHHH-HSHH
T ss_pred hcCCCCeEeccCCC-CeEEEcCHHHHHHHH-cChhhccCCcccCCcccccccccCCccCC-cHHHHHHHHHHhhh-cCHH
Confidence 3434 899998776 488999999999999 45567877764322211222223567777 99999999999987 8999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc------------------------ccccccccccC
Q 038677 82 RLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------------------IHALPFLIWLD 137 (186)
Q Consensus 82 ~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~p~l~~l~ 137 (186)
.++.+.+.+.+.++.+++.|.. .+ .+|+...+... ..++....++|
T Consensus 125 ~l~~~~~~i~~~~~~l~~~l~~------~~----~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~p 194 (421)
T 3lxh_A 125 EIRKLEDQIRTIAVEIIEGFAD------RG----HCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGNTP 194 (421)
T ss_dssp HHHTTHHHHHHHHHHHHHTTTT------TS----EEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh------cC----CeehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCC
Confidence 9999999999999999999861 11 23332222221 00111111111
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 138 IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
. ...++..+....+.+++.++|+++++. . .+|+++.|++
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~i~~r~~~----~----~~dll~~ll~ 233 (421)
T 3lxh_A 195 E-EQGRSLEAANKGFFEYVAPIIAARRGG----S----GTDLITRILN 233 (421)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHTTC----C----CCSHHHHHHT
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHHHHhC----C----CCCHHHHHHh
Confidence 0 124567778888999999999888764 1 1488888874
No 32
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.65 E-value=1.4e-15 Score=113.18 Aligned_cols=161 Identities=11% Similarity=0.127 Sum_probs=107.8
Q ss_pred cccCCeeEEe----e-CC-eeEEEecCHHHHHHHH-HhccccccCCCchhHH--HHh---hCCCCceeeccCChhHHHHH
Q 038677 3 DKYGPIFTIK----M-GI-NRALVVSNWEMAKECL-TTHDKVFASRPKTLAA--EIL---GYNFSMFGFSPYDFYWRETH 70 (186)
Q Consensus 3 ~~yG~i~~~~----~-~~-~~~i~v~~~~~~~~v~-~~~~~~~~~r~~~~~~--~~~---~~~~~~~~~~~~g~~w~~~R 70 (186)
++||||++++ + ++ .+.|+++||+++++|+ .+. .|++++..... ... ..+ .++++++ |+.|+++|
T Consensus 34 ~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~~~~~R 109 (406)
T 1ued_A 34 RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQFTQSKSGAHVEAQFV-GQISTYD-PPEHTRLR 109 (406)
T ss_dssp HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC---------CGGGT-TCGGGCC-TTHHHHHH
T ss_pred HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccccccccccccccccc-cccccCC-CHHHHHHH
Confidence 7899999999 6 78 8999999999999999 433 35555432111 111 012 3677776 99999999
Q ss_pred HHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c----------c------cccccc
Q 038677 71 KIATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S----------I------HALPFL 133 (186)
Q Consensus 71 k~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~----------~------~~~p~l 133 (186)
+++++. |+.+.++.+.+.+.++++.+++.|.. .+ .++|+.+.+.. + . .+..++
T Consensus 110 ~~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~------~g---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~ 179 (406)
T 1ued_A 110 KMLTPE-FTVRRIRRMEPAIQSLIDDRLDLLEA------EG---PSADLQGLFADPVGAHALCELLGIPRDDQREFVRRI 179 (406)
T ss_dssp HHHGGG-SSHHHHHHHHHHHHHHHHHHHHHHHH------HC---TTEEHHHHTHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHhhhh-hCHHHHHHHHHHHHHHHHHHHHHHHh------cC---CCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHH
Confidence 999987 89999999999999999999999972 11 13455444332 1 0 011111
Q ss_pred cccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 134 IWLD-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 134 ~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..+. .....++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 224 (406)
T 1ued_A 180 RRNADLSRGLKARAADSAAFNRYLDNLLARQRADP--------DDGLLGMIVR 224 (406)
T ss_dssp HHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 1110 011235566778888999999998887631 1488888764
No 33
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.65 E-value=4.3e-16 Score=115.50 Aligned_cols=162 Identities=7% Similarity=0.000 Sum_probs=107.6
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCH
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSN 80 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~ 80 (186)
|+++ |||+++..++ +.++|++|+.+++|+.+ .+.|++++..........++.++++.+ |+.|+++|+++++. |+.
T Consensus 33 l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~~R~~~~~~-f~~ 107 (396)
T 3oft_A 33 LLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKAFRTPVMKG-LAS 107 (396)
T ss_dssp GGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHHHHHHHHHH-TCH
T ss_pred HHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCCccccccccCccccC-CcHHHHHHHHhhhh-hCH
Confidence 4566 9999998874 48889999999999954 457777763321111111122566666 99999999999987 899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------c----cccccccccCCCCcHH
Q 038677 81 YRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------I----HALPFLIWLDIGGDER 143 (186)
Q Consensus 81 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~p~l~~l~~~~~~~ 143 (186)
+.++.+.+.+.+.++.+++.|.+ .+ .+|+...+... . .+..+...+......+
T Consensus 108 ~~l~~~~~~i~~~~~~l~~~l~~------~~----~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 177 (396)
T 3oft_A 108 RFVVALEPKVQAVARKLMESLRP------RG----SCDFVSDFAEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSM 177 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGG------GS----EEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh------cC----CccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999999962 11 23333333221 0 1111111110001123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 144 SMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 144 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+..+..+.+.+++.++|+++++.. ..|+++.|++
T Consensus 178 ~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 211 (396)
T 3oft_A 178 TVEQLKQAADDYLWPFIEKRMAQP--------GDDLFSRILS 211 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 456777888999999999887751 1488888875
No 34
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.65 E-value=5.2e-16 Score=115.61 Aligned_cols=160 Identities=10% Similarity=0.071 Sum_probs=107.8
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH-----HHHhhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA-----AEILGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~-----~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
++||||+++++++.+.++|++|+++++|+.++ . |++++.... .......+.++++.+ |+.|+++|+++++.
T Consensus 30 ~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~- 105 (411)
T 3a4g_A 30 RAEDPVRKLALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMD-PPDHTRLRKLVGRS- 105 (411)
T ss_dssp HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TTHHHHHHHHHHTT-
T ss_pred HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCC-chHHHHHHHHhhhh-
Confidence 68999999999999999999999999999754 3 777654321 011111234677777 99999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHh-hc------------c----cccccccccC-CC
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLA-DS------------I----HALPFLIWLD-IG 139 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~------------~----~~~p~l~~l~-~~ 139 (186)
|+.+.++.+.+.+.++++.+++.|. ..+ ++|+...+. .+ . .+..+...+. ..
T Consensus 106 fs~~~l~~~~~~i~~~~~~l~~~l~------~~~----~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~ 175 (411)
T 3a4g_A 106 FTVRRMNELEPRITEIADGLLAGLP------TDG----PVDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLVDDS 175 (411)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSC------SSS----CEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHTTSS
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHH------hcC----CccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHhccC
Confidence 8999999999999999999999986 111 344433221 11 0 0000110000 00
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 140 GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+ .++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 176 p-~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 212 (411)
T 3a4g_A 176 P-ADDKNAAMGKLHGYLSDLLERKRTEP--------DDALLSSLLA 212 (411)
T ss_dssp C-TTTHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 0 12455667788899999998887631 1488887764
No 35
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.65 E-value=8.5e-16 Score=115.72 Aligned_cols=163 Identities=10% Similarity=0.007 Sum_probs=108.6
Q ss_pred cccCCee--EEe-eCCeeEEEecCHHHHHHHHHhccccccCCCchhH-----H-----HHhhC---CCCceeeccCChhH
Q 038677 3 DKYGPIF--TIK-MGINRALVVSNWEMAKECLTTHDKVFASRPKTLA-----A-----EILGY---NFSMFGFSPYDFYW 66 (186)
Q Consensus 3 ~~yG~i~--~~~-~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~-----~-----~~~~~---~~~~~~~~~~g~~w 66 (186)
++||||+ ++. +|+.+.++|++++.+++|+.+. ..|++++.... . ...++ ...++++.+ |+.|
T Consensus 55 r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~~~d-g~~h 132 (450)
T 3tkt_A 55 RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLVQMD-APKH 132 (450)
T ss_dssp HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGGGCC-TTHH
T ss_pred HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCcccCC-CHHH
Confidence 5789999 888 7789999999999999999644 67877764321 0 01101 112567777 9999
Q ss_pred HHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHh-hc-------------------
Q 038677 67 RETHKIATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLA-DS------------------- 126 (186)
Q Consensus 67 ~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~------------------- 126 (186)
+++|+++++. |+.+.++.+.+.+.++++.+++.+.+. + .++|+...+. .+
T Consensus 133 ~~~R~~~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~~~------~---~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~ 202 (450)
T 3tkt_A 133 PKLRRLTQDW-FMPKNLARLDGEIRKIANEAIDRMLGA------G---EEGDFMALVAAPYPLHVVMQILGVPPEDEPKM 202 (450)
T ss_dssp HHHHHHHHTT-TSHHHHGGGHHHHHHHHHHHHHHHHHT------C---SEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHH
T ss_pred HHHHHHhhhh-hCHHHHHHHHHHHHHHHHHHHHHHHhc------C---CCEeeHHHHHHHHHHHHHHHHcCCChhHHHHH
Confidence 9999999977 899999999999999999999999731 1 1334333331 11
Q ss_pred ------------ccccccccccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 ------------IHALPFLIWLD-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 ------------~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
....++..+++ .....++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 266 (450)
T 3tkt_A 203 LFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP--------TDDVATVIAN 266 (450)
T ss_dssp HHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHT
T ss_pred HHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHh
Confidence 00111111110 012245666778888999999999887641 1488888774
No 36
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.64 E-value=6e-16 Score=115.49 Aligned_cols=162 Identities=11% Similarity=0.120 Sum_probs=109.3
Q ss_pred ccccCCeeEEeeC-CeeEEEecCHHHHHHHHHhccccccCCCch---hHHHH-h---hCCCCceeeccCChhHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG-INRALVVSNWEMAKECLTTHDKVFASRPKT---LAAEI-L---GYNFSMFGFSPYDFYWRETHKIA 73 (186)
Q Consensus 2 ~~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~---~~~~~-~---~~~~~~~~~~~~g~~w~~~Rk~~ 73 (186)
+++ |||++++++ +.+.++|++|+++++|+.+. .|++++.. ..... . +..+.++++.+ |+.|+++|+++
T Consensus 39 ~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~ 114 (417)
T 3tyw_A 39 RTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD-APEHTRYRRML 114 (417)
T ss_dssp HHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC-HHHHHHHHHHH
T ss_pred Hhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC-CcHHHHHHHHH
Confidence 344 999999987 58999999999999999754 56665321 11111 1 01234677777 99999999999
Q ss_pred HHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c---------------cc-cccccccc
Q 038677 74 TLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S---------------IH-ALPFLIWL 136 (186)
Q Consensus 74 ~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~-~~p~l~~l 136 (186)
++. |+.++++.+.+.+.++++.+++.+.. .+ .++|+...+.. + .. +..+...+
T Consensus 115 ~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~------~g---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 184 (417)
T 3tyw_A 115 LPA-FTVRRVRAMRPAVQARVDEILDGMLA------AG---GPVDLVSAYANAVSTSVICELLGIPRHDLEFFRDVTRIS 184 (417)
T ss_dssp GGG-GCHHHHHHTHHHHHHHHHHHHHHHHH------HC---SSEEHHHHTHHHHHHHHHHHHHTCCTTTTTHHHHHHHHH
T ss_pred Hhh-hCHHHHHHHHHHHHHHHHHHHHHHHh------hC---CCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 987 89999999999999999999999973 11 13555554432 1 00 11111111
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 137 -DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
......++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 185 ~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~d~l~~ll~ 226 (417)
T 3tyw_A 185 GSRNSTAEQVSEALGGLFGLLGGLVAERREEP--------RDDLISKLVT 226 (417)
T ss_dssp HSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSC--------CSSHHHHHHH
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCHHHHHHH
Confidence 1112334567788888999999998887631 1488887763
No 37
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.64 E-value=2.6e-15 Score=111.37 Aligned_cols=162 Identities=9% Similarity=0.085 Sum_probs=106.4
Q ss_pred ccccCCeeEEeeC-Ce---eEEEecCHHHHHHHHHhccccccCCCc------h---hHHHHhhCCCCceeeccCChhHHH
Q 038677 2 ADKYGPIFTIKMG-IN---RALVVSNWEMAKECLTTHDKVFASRPK------T---LAAEILGYNFSMFGFSPYDFYWRE 68 (186)
Q Consensus 2 ~~~yG~i~~~~~~-~~---~~i~v~~~~~~~~v~~~~~~~~~~r~~------~---~~~~~~~~~~~~~~~~~~g~~w~~ 68 (186)
+++ |||++++++ +. +.++|+||+++++|+.++ ..|++++. . ........+ .++++++ |+.|++
T Consensus 23 ~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~~~~ 98 (398)
T 1lfk_A 23 LAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELV-GNLMDYD-PPEHTR 98 (398)
T ss_dssp HTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCT-TCGGGCC-TTHHHH
T ss_pred Hhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccc-cCccccC-CHHHHH
Confidence 344 999999875 45 899999999999999433 34666654 1 111111122 3677777 999999
Q ss_pred HHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------c----cccc
Q 038677 69 THKIATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------I----HALP 131 (186)
Q Consensus 69 ~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~----~~~p 131 (186)
+|+++++. |+.++++.+.+.+.++++.+++.|... + .++|+.+.+.. + . .+..
T Consensus 99 ~R~~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~~------~---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~ 168 (398)
T 1lfk_A 99 LRRKLTPG-FTLRKMQRMAPYIEQIVNDRLDEMERA------G---SPADLIAFVADKVPGAVLCELVGVPRDDRDMFMK 168 (398)
T ss_dssp HHHHHGGG-GCHHHHHHHHHHHHHHHHHHHHHHHHH------C---SSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHH
T ss_pred HHHHHHhh-hCHHHHHHHHHHHHHHHHHHHHHHHhc------C---CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999987 899999999999999999999999621 1 13455444443 1 0 0111
Q ss_pred ccccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 132 FLIWL-DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 132 ~l~~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+...+ ...+..++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 215 (398)
T 1lfk_A 169 LCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEP--------GEGMIGAVVA 215 (398)
T ss_dssp HHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 11111 1123346677788889999999999887641 1488888764
No 38
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.64 E-value=1.9e-15 Score=112.26 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=108.8
Q ss_pred cccCCeeEEeeC-CeeEEEecCHHHHHHHHHhcc-ccccCCCchhH---H-HHhhCCCCceeeccCChhHHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG-INRALVVSNWEMAKECLTTHD-KVFASRPKTLA---A-EILGYNFSMFGFSPYDFYWRETHKIATLE 76 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~~~~-~~~~~r~~~~~---~-~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~ 76 (186)
++||||+++.++ +.+.++|++++.+++++.++. ..+.+++.... . .....+..++++++ |+.|+++|+++++.
T Consensus 27 ~~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~ 105 (404)
T 1jfb_A 27 RATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMD-PPEHMHQRSMVEPT 105 (404)
T ss_dssp HHHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCCCGGGCC-TTHHHHHHTTTGGG
T ss_pred HHhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccccchhcccCcccccC-chhHHHHHHHhhhh
Confidence 369999999874 566777899999999997652 23444443211 1 11122223677777 99999999999987
Q ss_pred hcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc-------------ccccccccc-----cCC
Q 038677 77 LLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS-------------IHALPFLIW-----LDI 138 (186)
Q Consensus 77 ~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~p~l~~-----l~~ 138 (186)
|+.++++.+.+.+.++++.+++.|.+.. ..+.++|+...+... ..-.+++.. ...
T Consensus 106 -fs~~~l~~~~~~i~~~~~~l~~~l~~~~------~~~~~~d~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~ 178 (404)
T 1jfb_A 106 -FTPEAVKNLQPYIQRTVDDLLEQMKQKG------CANGPVDLVKEFALPVPSYIIYTLLGVPFNDLEYLTQQNAIRTNG 178 (404)
T ss_dssp -GSHHHHHHHHHHHHHHHHHHHHHHHHHC------STTSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHCT
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999997321 011245555544432 000011110 011
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhh
Q 038677 139 GGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMR 184 (186)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 184 (186)
....++..++...+.+++.++|++++++. .+|+++.|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll 216 (404)
T 1jfb_A 179 SSTAREASAANQELLDYLAILVEQRLVEP--------KDDIISKLC 216 (404)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCC--------CCcHHHHHH
Confidence 12345666777888999999998887631 148888876
No 39
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.63 E-value=1.5e-15 Score=113.06 Aligned_cols=163 Identities=15% Similarity=0.075 Sum_probs=108.5
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc--hhHH-HH------hh--CCCCceeeccCChhHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK--TLAA-EI------LG--YNFSMFGFSPYDFYWRETHK 71 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~--~~~~-~~------~~--~~~~~~~~~~~g~~w~~~Rk 71 (186)
++||||+++++++.+.|+|+||+++++|+.++. +++++. +... .. .. .+ .++++.+ |+.|+++|+
T Consensus 25 ~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~h~~~R~ 100 (408)
T 1odo_A 25 REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAV-ENMFTAY-GPNHRKLRR 100 (408)
T ss_dssp HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHC-CSGGGCC-HHHHHHHHH
T ss_pred HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccc-ccccccC-ChHHHHHHH
Confidence 689999999998899999999999999997542 344332 1100 11 00 12 3677777 999999999
Q ss_pred HHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c---------c-------ccccccc
Q 038677 72 IATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S---------I-------HALPFLI 134 (186)
Q Consensus 72 ~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---------~-------~~~p~l~ 134 (186)
++++. |+..+++.+.+.+.++++.+++.|.+. .. +.++|+.+.+.. + . .+..++.
T Consensus 101 ~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~--~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 172 (408)
T 1odo_A 101 LVAPA-FSARRVDAMRPAVEAMVTGLVDRLAEL-----PA--GEPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRALVD 172 (408)
T ss_dssp TTGGG-GSHHHHHHHHHHHHHHHHHHHHHHHHS-----CT--TSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred Hhhhh-cCHHHHHHHHHHHHHHHHHHHHHHHhh-----cC--CCCcchHHHHhhhhHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99987 899999999999999999999999731 10 124555544432 1 0 0000111
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 135 WL-DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 135 ~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+ ......++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 216 (408)
T 1odo_A 173 GVFDTTLDQAEAQANTARLYEVLDQLIAAKRATP--------GDDMTSLLIA 216 (408)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCHHHHHHH
Confidence 00 0011234566777888999999998887531 1488887763
No 40
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.63 E-value=2.9e-15 Score=111.35 Aligned_cols=160 Identities=16% Similarity=0.156 Sum_probs=109.2
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch--h----------HH-HHh--hCCCCceeeccCChhHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT--L----------AA-EIL--GYNFSMFGFSPYDFYWR 67 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~--~----------~~-~~~--~~~~~~~~~~~~g~~w~ 67 (186)
++||||+++++++.+.+++++|+++++|+.++ .|++++.. . .. ... ..+ .++++.+ |+.|+
T Consensus 24 ~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~h~ 99 (404)
T 1z8o_A 24 RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA-TNMGTSD-PPTHT 99 (404)
T ss_dssp HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS-SSGGGCC-TTHHH
T ss_pred HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc-cccccCC-CcHHH
Confidence 68999999999999999999999999999754 57666532 1 11 110 112 3677777 99999
Q ss_pred HHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------c----ccc
Q 038677 68 ETHKIATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------I----HAL 130 (186)
Q Consensus 68 ~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~----~~~ 130 (186)
++|+++++. |+.+.++.+.+.+.++++.+++.+. . + .++|+...+.. + . .+.
T Consensus 100 ~~R~~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~------~-~---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~ 168 (404)
T 1z8o_A 100 RLRKLVSQE-FTVRRVEAMRPRVEQITAELLDEVG------D-S---GVVDIVDRFAHPLPIKVICELLGVDEKYRGEFG 168 (404)
T ss_dssp HHHHHHHTT-SCHHHHHHTHHHHHHHHHHHHHTSC------S-S---SEEEHHHHTTTHHHHHHHHHHTTCCGGGTTTHH
T ss_pred HHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHhhh------h-c---CCcchHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Confidence 999999987 8999999999999999999999885 1 1 13454433321 1 0 000
Q ss_pred cccccc-C-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 131 PFLIWL-D-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 131 p~l~~l-~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+...+ . .++..++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 169 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 217 (404)
T 1z8o_A 169 RWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEP--------GDDLLSALIR 217 (404)
T ss_dssp HHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHh
Confidence 010000 0 001145566777888899999998887631 1488888764
No 41
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.63 E-value=3.7e-15 Score=111.47 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=76.4
Q ss_pred cccCCeeEEeeC--CeeEEEecCHHHHHHHHHhccccccCCCc--------hh-H-------HHHhhCCCCceeeccCCh
Q 038677 3 DKYGPIFTIKMG--INRALVVSNWEMAKECLTTHDKVFASRPK--------TL-A-------AEILGYNFSMFGFSPYDF 64 (186)
Q Consensus 3 ~~yG~i~~~~~~--~~~~i~v~~~~~~~~v~~~~~~~~~~r~~--------~~-~-------~~~~~~~~~~~~~~~~g~ 64 (186)
++||||+++++| +.+.++|+||+.+++|+.++ .|++++. .. . ...+. + .++++++ |+
T Consensus 30 ~~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~d-g~ 104 (425)
T 2z3t_A 30 REAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV-E-NWLVFLD-PP 104 (425)
T ss_dssp HHHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH-T-TCGGGCC-HH
T ss_pred HhcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc-c-cccccCC-ch
Confidence 359999999987 78899999999999999754 6777753 11 1 11122 1 3678887 99
Q ss_pred hHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 65 YWRETHKIATLELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 65 ~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
.|+++|+++++. |+.+.++.+.+.+.+.++.+++.|.
T Consensus 105 ~h~~~R~~~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~ 141 (425)
T 2z3t_A 105 HHTELRSLLTTE-FSPSIVTGLRPRIAELASALLDRLR 141 (425)
T ss_dssp HHHHHHHHHHGG-GSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 8999999999999999999999996
No 42
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.62 E-value=7e-16 Score=114.82 Aligned_cols=160 Identities=9% Similarity=0.025 Sum_probs=103.2
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCc---hhH---HHHh--hCCCCceeeccCChhHHHHHHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK---TLA---AEIL--GYNFSMFGFSPYDFYWRETHKIA 73 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~---~~~---~~~~--~~~~~~~~~~~~g~~w~~~Rk~~ 73 (186)
++||||+++++ |+.+.|+|+||+++++|+.++ .|++++. +.. .... ..+ .++++.+ |+.|+++|+++
T Consensus 34 ~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~h~~~R~~~ 109 (408)
T 3abb_A 34 RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLA-FPLIGVD-DPVHARQRRML 109 (408)
T ss_dssp CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------C-CTTTTCC-TTHHHHHHHHH
T ss_pred HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccc-cccccCC-chHHHHHHHHh
Confidence 68999999998 889999999999999999753 2444432 111 1100 012 2577776 99999999999
Q ss_pred HHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c-----cccc-----------cccccc
Q 038677 74 TLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S-----IHAL-----------PFLIWL 136 (186)
Q Consensus 74 ~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~-----------p~l~~l 136 (186)
++. |+.++++.+.+.+.++++.+++.|.. .+ .++|+...+.. + ...| .++..+
T Consensus 110 ~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~------~g---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 179 (408)
T 3abb_A 110 IPS-FGVKRMNAIRPRLQSLVDRLLDDMLA------KG---PGADLVSAFALPVPSVAICELLGVPYGDHDFFEECSRNF 179 (408)
T ss_dssp GGG-GCHHHHHHHHHHHHHHHHHHHHHHHH------TC---SCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH
T ss_pred hhh-cCHHHHHHHHHHHHHHHHHHHHHHHh------cC---CCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 987 89999999999999999999999972 11 13455444432 1 0000 010000
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 137 -DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..... ++..+....+.+++.++|+++++.. .+|+++.|++
T Consensus 180 ~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 220 (408)
T 3abb_A 180 VGAATS-AEADAAFGELYTYLHGLVGRKQAEP--------EDGLLDELIA 220 (408)
T ss_dssp C-------CCSSHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred hcccch-HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHh
Confidence 00011 2233456678888999998877631 1488887763
No 43
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.62 E-value=4.5e-15 Score=110.75 Aligned_cols=157 Identities=13% Similarity=0.068 Sum_probs=105.7
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhh--------CCCCceeeccCChhHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILG--------YNFSMFGFSPYDFYWRETHKIAT 74 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~--------~~~~~~~~~~~g~~w~~~Rk~~~ 74 (186)
++||||+++++| .++|++|+.+++|+.+ ...+++++......... ..+.++++++ |+.|+++|++++
T Consensus 39 r~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~ 113 (418)
T 3r9b_A 39 RRGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD-PPDHTRLRGLVS 113 (418)
T ss_dssp HHHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHHHHHC---------CCCGGGCC-TTHHHHHHHHHH
T ss_pred HhcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccccccccccccccccccchhhcC-CchHHHHHHHhh
Confidence 578999998776 9999999999999964 44556665433322111 1224677788 999999999999
Q ss_pred HhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c---------------------------
Q 038677 75 LELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S--------------------------- 126 (186)
Q Consensus 75 ~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------------- 126 (186)
+. |+.+.++.+.+.+.+.++.+++ +. ..+ .+|+...+.. +
T Consensus 114 ~~-fs~~~l~~~~~~i~~~~~~ll~-l~------~~~----~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 181 (418)
T 3r9b_A 114 KA-FAPRVIKRLEPEITALVDQLLD-AV------DGP----EFNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALLA 181 (418)
T ss_dssp GG-GSHHHHGGGHHHHHHHHHHHHH-TC------CSS----EEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred hh-hCHHHHHHHHHHHHHHHHHHHh-hh------ccC----CeehHHHHhCcCCHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 87 8999999999999999999999 74 111 2232221111 0
Q ss_pred --ccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 127 --IHALPFLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 127 --~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.++.+.+++ ....++..++...+.+++.++|++++++. ..|+++.|++
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~d~l~~ll~ 233 (418)
T 3r9b_A 182 AALDPFLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRTP--------GEDLMSGLVA 233 (418)
T ss_dssp HTTSCHHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTSC--------CSSHHHHHHH
T ss_pred hhcCccccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CccHHHHHHH
Confidence 11111111122 13456777888889999999998876531 1488888763
No 44
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.62 E-value=7.1e-15 Score=109.56 Aligned_cols=165 Identities=9% Similarity=-0.007 Sum_probs=109.3
Q ss_pred cccc-CCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchh--HHHHhhCCCCceeeccCChhHHHHHHHHHHhhc
Q 038677 2 ADKY-GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AAEILGYNFSMFGFSPYDFYWRETHKIATLELL 78 (186)
Q Consensus 2 ~~~y-G~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f 78 (186)
+++| |||+++.+++.+.+++++|++++ ++.+. ..|+.++... ....+. +..++++++ |+.|+++|+++++. |
T Consensus 28 ~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~-g~~~l~~~d-g~~h~~~R~~~~~~-f 102 (415)
T 3awm_A 28 CQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL-GQGGVQGLD-GETHRHRKQMFMGL-M 102 (415)
T ss_dssp HHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS-CSSSGGGCC-HHHHHHHHHHHHTT-C
T ss_pred HHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc-CCcceeecC-cHHHHHHHHHHHHh-c
Confidence 5688 79999999888999999999986 66433 4565543322 111121 223677777 99999999999987 8
Q ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc------------c---ccccc-------cccc
Q 038677 79 SNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS------------I---HALPF-------LIWL 136 (186)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~p~-------l~~l 136 (186)
+.+.++.+.+.+.+.++.+++.|.+. + ++|+.+.+..+ . .+..+ +..+
T Consensus 103 s~~~l~~~~~~i~~~~~~ll~~~~~~------~----~vdl~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~ 172 (415)
T 3awm_A 103 TPERVRALAQLFEAEWRRAVPGWTRK------G----EIVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALFDAA 172 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH------S----EEEHHHHHHHHHHHHHHHHHTCCCCGGGHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccC------C----cEeHHHHHHHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHh
Confidence 99999999999999999999999621 1 34444433322 0 00001 0111
Q ss_pred C-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 137 D-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 137 ~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+ +.+..++..++...+.+++.++|+++++...... ..|+++.|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~d~l~~ll~ 218 (415)
T 3awm_A 173 GSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSG----SGTAAYAIAW 218 (415)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCC----TTSHHHHHHH
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCHHHHHHh
Confidence 1 1122345667778889999999999887532211 2488888764
No 45
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.62 E-value=4.7e-15 Score=110.51 Aligned_cols=160 Identities=13% Similarity=0.088 Sum_probs=108.2
Q ss_pred ccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCchh-------HHHHhh---CCCCc-eeeccCChhHHHHHH
Q 038677 4 KYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTL-------AAEILG---YNFSM-FGFSPYDFYWRETHK 71 (186)
Q Consensus 4 ~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~-------~~~~~~---~~~~~-~~~~~~g~~w~~~Rk 71 (186)
+||||+++++ |+.+.++|++|+++++|+.+ ..|++++... ...... .+ .+ +++++ |+.|+++|+
T Consensus 33 ~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-g~~h~~~R~ 108 (413)
T 2z36_A 33 ERAPINKVRLTSGGQAWWVSGHEEARAVLAD--GRFSSDKRKDGFPLFTLDAATLQQLRSQ-PPLMLGMD-GAEHSAARR 108 (413)
T ss_dssp HHCSEEEEEETTSCEEEEECSHHHHHHHHHC--TTEECCTTSTTCCCSSCCHHHHHHHTTS-CCCGGGCC-HHHHHHHHH
T ss_pred HcCCeeEeecCCCceEEEEecHHHHHHHHcC--CCcccCccccCccccccccccccccccc-cccccccC-chHHHHHHH
Confidence 7899999997 88999999999999999975 3576665321 111110 12 36 77777 999999999
Q ss_pred HHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c---------c-------ccccccc
Q 038677 72 IATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S---------I-------HALPFLI 134 (186)
Q Consensus 72 ~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---------~-------~~~p~l~ 134 (186)
++++. |+.+.++.+.+.+.++++.+++.|.. ..+ .++|+...+.. + . .+..+..
T Consensus 109 ~~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~~------~~~--~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 179 (413)
T 2z36_A 109 PVIGE-FTVKRLAALRPRIQDIVDHFIDDMLA------TDQ--RPVDLVQALSLPVPSLVICELLGVPYTDHDFFQSRTT 179 (413)
T ss_dssp HHHGG-GSHHHHHHHHHHHHHHHHHHHHHHTT------CSC--SSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHH
T ss_pred HHHHh-hCHHHHHHHHHHHHHHHHHHHHHHHH------hcC--CCccHHHHHhhhhHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99987 89999999999999999999999961 101 14555443332 1 0 0011111
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 135 WL-DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 135 ~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+ .... .++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 180 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 222 (413)
T 2z36_A 180 MMVSRTS-MEDRRRAFAELRAYIDDLITRKESEP--------GDDLFSRQIA 222 (413)
T ss_dssp HTTCSSC-HHHHHHHHHHHHHHHHHHHHHHHSSC--------CSSHHHHHHH
T ss_pred HHhcccC-cHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 11 1101 14566777788899999998877531 1488887763
No 46
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.61 E-value=3.3e-15 Score=112.02 Aligned_cols=165 Identities=9% Similarity=0.059 Sum_probs=110.3
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHHhccccccCCCch--h-HHHHhhCCCCceeeccCChhHHHHHHH
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLTTHDKVFASRPKT--L-AAEILGYNFSMFGFSPYDFYWRETHKI 72 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~--~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~ 72 (186)
++||||++++++ +.+.|+|+||+++++|+.+. ..|++++.. . ....+...+.++++++ |+.|+++|++
T Consensus 54 ~~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~ 131 (435)
T 2wm5_A 54 RREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD-DPRHQRLRSI 131 (435)
T ss_dssp HHHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC-TTHHHHHHHH
T ss_pred HhcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC-cHHHHHHHHH
Confidence 368999999986 67899999999999999764 468777531 1 1111111113677777 9999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHh-hc------------cc----ccccc--
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLA-DS------------IH----ALPFL-- 133 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~----~~p~l-- 133 (186)
+++. |+.+.++.+.+.+.++++.+++.|.+.. . +..+|+...+. .+ .. +..+.
T Consensus 132 l~~~-fs~~~l~~~~~~i~~~~~~ll~~l~~~~-----~--~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~ 203 (435)
T 2wm5_A 132 VSRA-FTPKVVARIEAAVRDRAHRLVSSMIANN-----P--DRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNV 203 (435)
T ss_dssp HHHT-CCHHHHHHHHHHHHHHHHHHHHHHHHHC-----T--TSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred hHHh-hCHHHHHHHHHHHHHHHHHHHHHHHhcC-----C--CCcEehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9987 8999999999999999999999997321 0 11334433221 11 00 00000
Q ss_pred --cc-cC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 134 --IW-LD-IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 134 --~~-l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.. .| +....++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 204 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 251 (435)
T 2wm5_A 204 ILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNH--------HDDLTSSLVE 251 (435)
T ss_dssp HHHTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCHHHHHHh
Confidence 00 01 112335677788889999999999887631 1488888764
No 47
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.61 E-value=2.6e-15 Score=112.59 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=77.3
Q ss_pred cccCCeeEEe--------eCCeeEEEecCHHHHHHHHHhccccccCCCchhHH--------HHhhCCCCceeeccCChhH
Q 038677 3 DKYGPIFTIK--------MGINRALVVSNWEMAKECLTTHDKVFASRPKTLAA--------EILGYNFSMFGFSPYDFYW 66 (186)
Q Consensus 3 ~~yG~i~~~~--------~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~--------~~~~~~~~~~~~~~~g~~w 66 (186)
++||||+++. +|+.+.++|++++.+++|+. +...|++++..... .....++.++++.+ |+.|
T Consensus 47 r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~-~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h 124 (433)
T 3ivy_A 47 RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISR-HSDVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMD-APHH 124 (433)
T ss_dssp HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHH-CTTTEESTTTCSCCCCCTTCCHHHHHGGGGSGGGCC-TTHH
T ss_pred HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHc-ChhhccCCcccccccccccccccccccccCCccccC-hHHH
Confidence 5799999998 55589999999999999995 44667776543211 11112223677777 9999
Q ss_pred HHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 67 RETHKIATLELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 67 ~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
+++|+++++. |+.+.++.+.+.+.+.++.+++.+.
T Consensus 125 ~~~R~~~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~ 159 (433)
T 3ivy_A 125 TRLRKIISRG-FTPRAVGRLHDELQERAQKIAAEAA 159 (433)
T ss_dssp HHHHHHHGGG-SCHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999987 8999999999999999999999996
No 48
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.61 E-value=2e-15 Score=112.46 Aligned_cols=160 Identities=13% Similarity=0.087 Sum_probs=106.0
Q ss_pred ccc-CCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCchhHHH--------HhhCCCCceeeccCChhHHHHHHH
Q 038677 3 DKY-GPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTLAAE--------ILGYNFSMFGFSPYDFYWRETHKI 72 (186)
Q Consensus 3 ~~y-G~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~Rk~ 72 (186)
++| |||+++++ |+.+.++|+||+++++|+.++ .|++++...... ....+ .++++.+ |+.|+++|++
T Consensus 34 ~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~h~~~R~~ 109 (412)
T 2zbx_A 34 RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPATSPRFEAVRESP-QAFIGLD-PPEHGTRRRM 109 (412)
T ss_dssp HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCCCSGGGC----CC-CCGGGCC-TTHHHHHHTT
T ss_pred HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccccccccccccccccc-cccccCC-cHHHHHHHHH
Confidence 466 99999998 889999999999999999753 244443211100 00012 3577776 9999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------cc----ccccccc
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------IH----ALPFLIW 135 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~----~~p~l~~ 135 (186)
+++. |+.++++.+.+.+.++++.+++.|... + .++|+...+.. + .. +..++..
T Consensus 110 ~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~~~------g---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~ 179 (412)
T 2zbx_A 110 TISE-FTVKRIKGMRPEVEEVVHGFLDEMLAA------G---PTADLVSQFALPVPSMVICRLLGVPYADHEFFQDASKR 179 (412)
T ss_dssp TGGG-GSHHHHHHHHHHHHHHHHHHHHHHHHH------C---SCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred hhhh-cCHHHHHHHHHHHHHHHHHHHHHHHhc------C---CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9987 899999999999999999999999721 1 13444443332 1 00 0001100
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 136 L-DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 136 l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
+ ..... ++..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 180 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 221 (412)
T 2zbx_A 180 LVQSTDA-QSALTARNDLAGYLDGLITQFQTEP--------GAGLVGALVA 221 (412)
T ss_dssp HHHCSSH-HHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HhccCcH-HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 0 01112 4566677788899999998887641 1488888764
No 49
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.59 E-value=7.1e-15 Score=109.48 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=107.8
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCC-chhHHH---------Hhh--CCCCceeeccCChhHHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRP-KTLAAE---------ILG--YNFSMFGFSPYDFYWRET 69 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~-~~~~~~---------~~~--~~~~~~~~~~~g~~w~~~ 69 (186)
++||||+++++ |+.+.++++||+++++|+.++. +++++ .+.... .++ ..+.++++.+ |+.|+++
T Consensus 27 ~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~ 103 (411)
T 1gwi_A 27 RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVD-GAEHRRL 103 (411)
T ss_dssp HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGGGCC-HHHHHHH
T ss_pred HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccccCC-cHHHHHH
Confidence 68999999998 8899999999999999997542 34443 111110 000 1023677777 9999999
Q ss_pred HHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------cc----cccc
Q 038677 70 HKIATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------IH----ALPF 132 (186)
Q Consensus 70 Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~----~~p~ 132 (186)
|+++++. |+.++++.+.+.+.++++.+++.|. .. +.++|+...+.. + .. +..+
T Consensus 104 R~~~~~~-fs~~~l~~~~~~i~~~~~~l~~~l~------~~---~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~ 173 (411)
T 1gwi_A 104 RTLVAQA-LTVRRVEHMRGRITELTDRLLDELP------AD---GGVVDLKAAFAYPLPMYVVADLMGIEEARLPRLKVL 173 (411)
T ss_dssp HHHHTTT-SCHHHHHTTHHHHHHHHHHHHHTSC------CS---CCCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHH
T ss_pred HHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHH------Hc---CCCcchHHHHhhHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999987 8999999999999999999999885 11 124555544432 1 00 0001
Q ss_pred cccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 133 LIWL-DIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 133 l~~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...+ ......++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 219 (411)
T 1gwi_A 174 FEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAP--------GDDLTSALIQ 219 (411)
T ss_dssp HHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred HHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 1100 0012234566777888999999998887531 1488888764
No 50
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.56 E-value=1.2e-14 Score=108.19 Aligned_cols=162 Identities=7% Similarity=0.032 Sum_probs=107.4
Q ss_pred cccCCeeEEeeCC--eeEEEecCHHHHHHHHHhccccccCCCchhH----HHHhhCC-CCceeeccCChhHHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGI--NRALVVSNWEMAKECLTTHDKVFASRPKTLA----AEILGYN-FSMFGFSPYDFYWRETHKIATL 75 (186)
Q Consensus 3 ~~yG~i~~~~~~~--~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~----~~~~~~~-~~~~~~~~~g~~w~~~Rk~~~~ 75 (186)
++||||+++++++ .+.+++++|+.+++|+.+ ..|.+++.... ...+... +.++++++ |+.|+++|+++++
T Consensus 37 ~~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~ 113 (411)
T 2dkk_A 37 MREGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFAD-QPDHNRLRRAVAG 113 (411)
T ss_dssp HTTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCC-TTHHHHHHHHHGG
T ss_pred HhcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCC-chHHHHHHHHhhH
Confidence 3799999999764 789999999999999964 35665543211 1111110 24677777 9999999999998
Q ss_pred hhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------c----cccccccccC-
Q 038677 76 ELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------I----HALPFLIWLD- 137 (186)
Q Consensus 76 ~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~----~~~p~l~~l~- 137 (186)
. |+.++++.+.+.+.+.++.+++.|... + .++|+...+.. + . .+..+...+.
T Consensus 114 ~-fs~~~l~~~~~~i~~~~~~l~~~l~~~------g---~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~ 183 (411)
T 2dkk_A 114 A-FTVGATKRLRPRAQEILDGLVDGILAE------G---PPADLVERVLEPFPIAVVSEVMGVPAADRERVHSWTRQIIS 183 (411)
T ss_dssp G-SSHHHHHHHHHHHHHHHHHHHHHHHHH------C---SCEEHHHHTTTHHHHHHHHHHHTCCSSHHHHHHHHHGGGCS
T ss_pred h-hCHHHHHHHHHHHHHHHHHHHHHHHhc------C---CCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 7 899999999999999999999999731 1 13444433332 1 0 0111111110
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 138 IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.....++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~dll~~ll~ 223 (411)
T 2dkk_A 184 TSGGAEAAERAKRGLYGWITETVRARAGSE--------GGDVYSMLGA 223 (411)
T ss_dssp SCSCSHHHHHHHHHHHHHHHHHHHTTTTCC--------SSCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 111234566777888889998888766431 1488888764
No 51
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.56 E-value=1.3e-14 Score=107.65 Aligned_cols=155 Identities=11% Similarity=0.077 Sum_probs=103.0
Q ss_pred ccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHHHH
Q 038677 4 KYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNYRL 83 (186)
Q Consensus 4 ~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l 83 (186)
+||||+++. .+.++|++|+++++|+.+. ..|++++... .... ++.++++.+ |+.|+++|+++++. |+...+
T Consensus 29 ~~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R~~~~~~-fs~~~l 99 (398)
T 2xkr_A 29 ANQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRRKLVNAG-FTRKRV 99 (398)
T ss_dssp HHCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHHHHHGGG-SCHHHH
T ss_pred hcCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--ccccccccC-chHHHHHHHHhhhh-hCHHHH
Confidence 399999663 3799999999999999654 4677775432 1111 224677777 99999999999987 899999
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c------------cc----ccccc----cc-cC--CC
Q 038677 84 EKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S------------IH----ALPFL----IW-LD--IG 139 (186)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~----~~p~l----~~-l~--~~ 139 (186)
+.+.+.+.+.++.+++.|.+ .+ .+|+...+.. + .. +..+. .. .| ++
T Consensus 100 ~~~~~~i~~~~~~l~~~l~~------~~----~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p 169 (398)
T 2xkr_A 100 KDKEASIAALCDTLIDAVCE------RG----ECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSHVSQ 169 (398)
T ss_dssp HTTHHHHHHHHHHHHHTTTT------TS----EEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHHHHHHhhhh------cC----CccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcccch
Confidence 99999999999999999862 11 2333322111 1 00 00000 00 01 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 140 GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
...++..++...+.+++.++|+++++. + ..|+++.|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~r~~~--~------~~dll~~ll~ 207 (398)
T 2xkr_A 170 EDFQITMDAFAAYNDFTRATIAARRAD--P------TDDLVSVLVS 207 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS--C------CSSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC--C------CCCHHHHHHH
Confidence 233456677778889999999888762 1 1488888764
No 52
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.56 E-value=8.3e-15 Score=108.63 Aligned_cols=157 Identities=17% Similarity=0.107 Sum_probs=103.9
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHH-------HHhhC-CCCceeeccCChhHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAA-------EILGY-NFSMFGFSPYDFYWRETHKIAT 74 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~-------~~~~~-~~~~~~~~~~g~~w~~~Rk~~~ 74 (186)
++||||++ + +.+.++|++|+++++|+.+ ..|++++..... ...+. + .++++++ |+.|+++|++++
T Consensus 23 ~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-g~~h~~~R~~~~ 95 (397)
T 3buj_A 23 LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVG-DIILFQD-EPDHGRLRGVVG 95 (397)
T ss_dssp HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHT-TCGGGCC-TTHHHHHHHHHG
T ss_pred HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccc-cccccCC-chhHHHHHHHHH
Confidence 58999998 6 5789999999999999964 356655432111 11111 2 3677777 999999999999
Q ss_pred HhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHh-hc------------c----ccccc----c
Q 038677 75 LELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLA-DS------------I----HALPF----L 133 (186)
Q Consensus 75 ~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~------------~----~~~p~----l 133 (186)
+. |+.+.++.+.+.+.++++.+++.+.. .+ ++|+...+. .+ . .+..+ .
T Consensus 96 ~~-fs~~~l~~~~~~i~~~~~~l~~~l~~------~~----~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 164 (397)
T 3buj_A 96 PA-FSPSALRRLEPVIAGTVDDLLRPALA------RG----AMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVG 164 (397)
T ss_dssp GG-SSTTTTGGGHHHHHHHHHHHHHHHHT------TT----EEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred Hh-cCHHHHHHHHHHHHHHHHHHHHHHhh------cC----CeehHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 87 89999999999999999999999972 11 233322211 11 0 00000 0
Q ss_pred cccC--CC-CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 134 IWLD--IG-GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 134 ~~l~--~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..++ ++ ...++..++...+.+++.++|+++++.. ..|+++.|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 211 (397)
T 3buj_A 165 RTLDRGASAEDMRRGHAAIAEFADYVERALARRRREG--------GEDLLALMLD 211 (397)
T ss_dssp GGGCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCSHHHHHHH
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCCHHHHHHH
Confidence 0111 11 1234566777888999999998887641 1488888764
No 53
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.56 E-value=1.9e-14 Score=107.01 Aligned_cols=149 Identities=16% Similarity=0.121 Sum_probs=100.5
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCchh-HHHHhhCCCCc--eeeccCC------hhHHHHHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTL-AAEILGYNFSM--FGFSPYD------FYWRETHKI 72 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~-~~~~~~~~~~~--~~~~~~g------~~w~~~Rk~ 72 (186)
++||||+++++ ++.+.++|+||+++++|+.++ .|.+++... .......+ .+ +++++ | +.|+++|++
T Consensus 36 ~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~-~~~~l~~~~-g~~~~~~~~h~~~R~~ 111 (404)
T 2xbk_A 36 QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRS-PFLDLLISD-ADAESGRRQHAETRRL 111 (404)
T ss_dssp HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCC-HHHHTTCBC-SCHHHHHHHHHHHHHH
T ss_pred HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccccc-ccccceeeC-CCCCCCCchHHHHHHH
Confidence 68999999997 789999999999999999753 466654432 11111112 34 67777 9 999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh-c---------c-------cccccccc
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD-S---------I-------HALPFLIW 135 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---------~-------~~~p~l~~ 135 (186)
+++. |+.++++.+.+.+.++++.+++.|.. .+ .++|+...+.. + . .+..++..
T Consensus 112 ~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~~------~g---~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~ 181 (404)
T 2xbk_A 112 LTPL-FSARRVLEMQPKVEEAADTLLDAFIA------QG---PPGDLHGELTVPFALTVLCEVIGVPPQRRAELTTLLAG 181 (404)
T ss_dssp HGGG-GCHHHHHHHHHHHHHHHHHHHHHHHH------TC---SSEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred hhhh-cCHHHHHHHHHHHHHHHHHHHHHHHh------cC---CCeeHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 9987 89999999999999999999999972 11 13444433321 1 0 00001111
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038677 136 L-DIGGDERSMKKIAKELDFVVQGWLEEHKRK 166 (186)
Q Consensus 136 l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (186)
+ ...... +..++...+.+++.++|+++++.
T Consensus 182 ~~~~~~~p-~~~~~~~~~~~~~~~~i~~r~~~ 212 (404)
T 2xbk_A 182 IAKLDDRE-GAVRAQDDLFGYVAGLVEHKRAE 212 (404)
T ss_dssp HTBSSCHH-HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHhccCcH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 000111 45667778889999999888764
No 54
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.55 E-value=1e-14 Score=108.84 Aligned_cols=169 Identities=12% Similarity=0.065 Sum_probs=106.7
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc-----hhHH---HHhhCC-CCceeeccCChhHHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-----TLAA---EILGYN-FSMFGFSPYDFYWRETHKIA 73 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~-----~~~~---~~~~~~-~~~~~~~~~g~~w~~~Rk~~ 73 (186)
++||||++ + ++.+.++|++|+++++|+.++ . |++++. +... ..++.. +.++++.+ |+.|+++|+++
T Consensus 36 ~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~ 110 (419)
T 1q5d_A 36 REATPIFY-W-DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP-PEDHARVRKLV 110 (419)
T ss_dssp HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC-HHHHHHHHHHH
T ss_pred HhhCCccc-c-CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhcccccccCC-chHHHHHHHHH
Confidence 57999999 6 677899999999999999765 3 887762 1101 111100 13567777 99999999999
Q ss_pred HHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhc-c-CCCCCcchhHhHHHHH-----------hhc-ccccccc--cccC
Q 038677 74 TLELLSNYRLEKLKHVREYELKTCLKELYQLWD-N-NKSTNKMLLVEMKRWL-----------ADS-IHALPFL--IWLD 137 (186)
Q Consensus 74 ~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~-~~~~~~~~~~~~~~~~-----------~~~-~~~~p~l--~~l~ 137 (186)
++. |+.+.++.+.+.+.++++.+++.|..... . ...-....++++...+ ..+ ..++... ..+|
T Consensus 111 ~~~-fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~P 189 (419)
T 1q5d_A 111 NPS-FTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRFGSATARALGVGLVP 189 (419)
T ss_dssp GGG-GSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHHHHHHHHHTTTTTSS
T ss_pred HHh-cCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccccccc
Confidence 987 89999999999999999999999963100 0 0000011122222111 000 0000000 1122
Q ss_pred CC-CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcc-cHHHhhhc
Q 038677 138 IG-GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEE-DFMYAMRS 185 (186)
Q Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~l~~ll~ 185 (186)
+. ...++..+....+.+++.++|+++++.. .. |+++.|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~~dll~~ll~ 231 (419)
T 1q5d_A 190 RVDEETKTLVASVTEGLALLHGVLDERRRNP--------LENDVLTMLLQ 231 (419)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCHHHHHHh
Confidence 11 2345677788889999999999887631 14 78887763
No 55
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.54 E-value=1.3e-15 Score=115.80 Aligned_cols=97 Identities=14% Similarity=0.042 Sum_probs=74.2
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccc-cccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDK-VFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++|||||++++|+.+.++|++|+++++|+.++.. .+..++.......++.+ .+...+ |+.|+++|+.+.+. |+
T Consensus 42 l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~-g~~~~~~Rr~~~~~-f~ 117 (491)
T 3v8d_A 42 NQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSAKAFGHR--SIDPMD-GNTTENINDTFIKT-LQ 117 (491)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHHHHHTCC--CCCGGG-SSBCCCHHHHHHHH-HS
T ss_pred HHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHHHhcCCc--cccccc-chhHHHHHHHHHHH-cC
Confidence 357899999999999999999999999999965431 23322222233334333 344445 99999999999977 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKEL 101 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l 101 (186)
.+.++.+.+.+.+++..+++.+
T Consensus 118 ~~~l~~~~~~i~~~~~~ll~~~ 139 (491)
T 3v8d_A 118 GHALNSLTESMMENLQRIMRPP 139 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC
T ss_pred ccchHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988754
No 56
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.54 E-value=6.7e-15 Score=108.87 Aligned_cols=95 Identities=12% Similarity=0.004 Sum_probs=78.6
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCC-chhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRP-KTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++||||++ ++|+.+.++++||+++++|+.++ .|.+++ .......+. + .++++++ |+.|+++|+++++. |+
T Consensus 27 l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~-g-~~l~~~~-g~~h~~~R~~~~~~-fs 99 (389)
T 1n97_A 27 WGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT-G-RGLLTDW-GESWKEARKALKDP-FL 99 (389)
T ss_dssp HHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH-C-SSTTTCC-HHHHHHHHHHHCGG-GS
T ss_pred HHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh-C-CccccCC-cHHHHHHHHHhCcc-cC
Confidence 3689999999 99999999999999999999765 777776 332332222 2 3677777 99999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
.++++.+.+.+.++++.+++.|.
T Consensus 100 ~~~l~~~~~~i~~~~~~l~~~l~ 122 (389)
T 1n97_A 100 PKNVRGYREAMEEEARAFFGEWR 122 (389)
T ss_dssp HHHHHTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999998874
No 57
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.53 E-value=1.7e-13 Score=102.13 Aligned_cols=156 Identities=10% Similarity=0.020 Sum_probs=105.3
Q ss_pred cccC--CeeEEe-eCCeeEEEecCHHHHHHHHHhccccccCCC-chhHHHHhhCCCCc-eeeccCChhHHHHHHHHHHhh
Q 038677 3 DKYG--PIFTIK-MGINRALVVSNWEMAKECLTTHDKVFASRP-KTLAAEILGYNFSM-FGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 3 ~~yG--~i~~~~-~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
.+|| ||++++ +| +.++++||+++++|+. +...|++++ .+..... ..+ .+ +++++ |+.|+++|+++++.
T Consensus 47 ~~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~-~~~l~~~~-g~~~~~~R~~~~~~- 119 (415)
T 2zwu_A 47 QESNVPDLVWTRCNG--GHWIATRGQLIREAYE-DYRHFSSECPFIPREAG-EAY-DFIPTSMD-PPEQRQFRALANQV- 119 (415)
T ss_dssp GSTTSCSEEEECGGG--CEEEECSHHHHHHHHH-CTTTEETTSCSSSHHHH-HHC-CCTTTTCC-TTTTHHHHHHHHHH-
T ss_pred HhcCCCCeEEecCCC--CeEEEcCHHHHHHHHc-CccccCCCcccCCCCcc-ccc-cccCccCC-CcHHHHHHHHHHhh-
Confidence 4789 999998 55 6999999999999996 445687776 3332221 112 35 77777 99999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHh-hc-----cccc-------c----ccccc-C-C
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLA-DS-----IHAL-------P----FLIWL-D-I 138 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~-------p----~l~~l-~-~ 138 (186)
|+...++.+.+.+.++++.+++.|.+ .+ .+|+...+. .+ ...| + +...+ . .
T Consensus 120 f~~~~l~~~~~~i~~~~~~l~~~l~~------~~----~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~ 189 (415)
T 2zwu_A 120 VGMPVVDKLENRIQELACSLIESLRP------QG----QCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPD 189 (415)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHGG------GT----EEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCC
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHh------cC----CccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999972 11 344443321 11 0000 0 00000 0 0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 139 GGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+. +..+....+.+++.++|+++++.. ..|+++.|++
T Consensus 190 ~P~--~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~ 226 (415)
T 2zwu_A 190 GSM--TFAEAKEALYDYLIPIIEQRRQKP--------GTDAISIVAN 226 (415)
T ss_dssp SSS--CHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHT
T ss_pred CHH--HHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 011 345667788899999998887631 1488888874
No 58
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.52 E-value=4.3e-15 Score=111.64 Aligned_cols=94 Identities=11% Similarity=0.074 Sum_probs=65.0
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNYR 82 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~ 82 (186)
++||||+++..++ .++|++|+.+++|+.+. ..|++++......... +..++++.+ |+.|+++|+++++. |+.+.
T Consensus 63 r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~l~~~d-g~~h~~~Rr~~~~~-fs~~~ 136 (441)
T 3nc3_A 63 REEDPVHYEESID--SYFISRYHDVRYILQHP-DIFTTKSLVERAEPVM-RGPVLAQMH-GKEHSAKRRIVVRS-FIGDA 136 (441)
T ss_dssp HHHCSEEEETTTT--EEEECCHHHHHHHHHCT-TTEECCCTTSCCCCSC-C--------------CCHHHHHHH-HHHTH
T ss_pred HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCc-cccccccccccccccc-CCCccccCC-cHHHHHHHHHHHhh-cCHHH
Confidence 5799999987655 89999999999999765 3477765443221111 222477777 99999999999987 89999
Q ss_pred HHHhHHHHHHHHHHHHHHHH
Q 038677 83 LEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 83 l~~~~~~~~~~~~~l~~~l~ 102 (186)
++.+.+.+.+.++.+++.|.
T Consensus 137 l~~~~~~i~~~~~~ll~~l~ 156 (441)
T 3nc3_A 137 LDHLSPLIKQNAENLLAPYL 156 (441)
T ss_dssp HHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999886
No 59
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.49 E-value=5.5e-14 Score=104.82 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=76.6
Q ss_pred cccCCee-----EEeeCCeeEEEecCHHHHHHHHHhccccccCCCchh--HH-HHh-h-CCCCceeeccCChhHHHHHHH
Q 038677 3 DKYGPIF-----TIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AA-EIL-G-YNFSMFGFSPYDFYWRETHKI 72 (186)
Q Consensus 3 ~~yG~i~-----~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~--~~-~~~-~-~~~~~~~~~~~g~~w~~~Rk~ 72 (186)
++||||+ ++++ .+.++|+||+++++|+.++ ..|++++... .. ..+ . .++.++++++ |+.|+++|++
T Consensus 35 ~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~ 110 (414)
T 2uuq_A 35 RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD-PPVHTEFRKL 110 (414)
T ss_dssp HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC-TTHHHHHHHH
T ss_pred HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC-chhHHHHHHH
Confidence 4689999 8866 6799999999999999865 5687776432 11 122 2 2234788777 9999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
+++. |+.+.++.+.+.+.++++.+++.|.
T Consensus 111 ~~~~-fs~~~l~~~~~~i~~~~~~ll~~l~ 139 (414)
T 2uuq_A 111 VSRG-FTPRQVETVEPTVRKFVVERLEKLR 139 (414)
T ss_dssp HHTT-SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhh-cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 8999999999999999999999997
No 60
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.48 E-value=2.9e-14 Score=106.37 Aligned_cols=96 Identities=15% Similarity=0.005 Sum_probs=74.7
Q ss_pred ccCCeeEEeeCC--eeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhC---C-CCceeeccCChhHHHHHHHHHHhh
Q 038677 4 KYGPIFTIKMGI--NRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGY---N-FSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 4 ~yG~i~~~~~~~--~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~---~-~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
+||||+++...| .+.++|++++.+++|+. +...|++++.......... . +.++++.+ |+.|+++|+++++.
T Consensus 48 ~~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~-~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~- 124 (415)
T 3mgx_A 48 AEDAMVWSDPGSSPSGFWSVFSHRACAAVLA-PSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HEQHRKLRKLVGPL- 124 (415)
T ss_dssp HHTCCEEECSSSSSSCEEEECSHHHHHHHSC-TTSSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HHHHHHHHHHHGGG-
T ss_pred hcCCEeeccCCCCcCCEEEEecHHHHHHHHh-ChhhhcCCccccccccccccccccCCCccccC-cHHHHHHHHHhHhh-
Confidence 589999997444 78999999999999994 4456777764322111100 1 23566667 99999999999987
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
|+.+.++.+.+.+.++++.+++.+.
T Consensus 125 fs~~~l~~~~~~i~~~~~~ll~~l~ 149 (415)
T 3mgx_A 125 LSRAAARKLAERVRIEVGDVLGRVL 149 (415)
T ss_dssp SSHHHHHHSHHHHHHHHHHHTTTSS
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998885
No 61
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.48 E-value=5e-13 Score=99.99 Aligned_cols=162 Identities=13% Similarity=0.049 Sum_probs=104.8
Q ss_pred ccCCeeEEee-CCeeEEEecCHHHHHHHHHhccccccCCCc---hhHH------HHhhCCCCceeeccCChhHHHHHHHH
Q 038677 4 KYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK---TLAA------EILGYNFSMFGFSPYDFYWRETHKIA 73 (186)
Q Consensus 4 ~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~---~~~~------~~~~~~~~~~~~~~~g~~w~~~Rk~~ 73 (186)
++|||+++.+ ++.+.++|++++.+++|+.+. ..|+.++. .... .....+..++++.+ |+.|+++|+++
T Consensus 49 ~~gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~ 126 (426)
T 3rwl_A 49 KDDPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD-RPRHDEQRKAV 126 (426)
T ss_dssp HHCSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC-TTHHHHHHHHH
T ss_pred hcCCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC-chHHHHHHHHh
Confidence 4599999987 467899999999999999643 45655441 1100 00111223567777 99999999999
Q ss_pred HHhhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc----------------cccc-ccc---
Q 038677 74 TLELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS----------------IHAL-PFL--- 133 (186)
Q Consensus 74 ~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-p~l--- 133 (186)
++. |+.+.++.+.+.+.+.++.+++.|. ..+ ++|+...+... ...+ .|.
T Consensus 127 ~~~-fs~~~l~~~~~~i~~~~~~ll~~l~------~~~----~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~ 195 (426)
T 3rwl_A 127 SPI-VAPANLAALEGTIRERVSKTLDGLP------VGE----EFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWSDVT 195 (426)
T ss_dssp GGG-GCHHHHHHHHHHHHHHHHHHHHTSC------SSS----CEEHHHHTHHHHHHHHHHHHHTCCGGGTHHHHHHHHHH
T ss_pred hhh-hCHHHHHHHHHHHHHHHHHHHHHhh------cCC----CcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 987 8999999999999999999998884 111 34443333211 0000 011
Q ss_pred cccC---CCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 134 IWLD---IGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 134 ~~l~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
..++ .....+...+....+.+++.++|+++++. +. ..|+++.|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~----~~dll~~ll~ 243 (426)
T 3rwl_A 196 TAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNK---DP----GNDLISMLAH 243 (426)
T ss_dssp TCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTS---CC----CSSHHHHHHH
T ss_pred HhccCccccccHHHHHHHHHHHHHHHHHHHHHHhhc---CC----CCCHHHHHHh
Confidence 1111 11234556677788999999999887321 11 2488888764
No 62
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.47 E-value=1.9e-13 Score=101.82 Aligned_cols=90 Identities=13% Similarity=0.062 Sum_probs=71.1
Q ss_pred ccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHHHH
Q 038677 4 KYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNYRL 83 (186)
Q Consensus 4 ~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l 83 (186)
+|||| ++++.+.+++++|+.+++|+.+. ..|++++.... .....++.++++.+ |+.|+++|+++++. |+.+.+
T Consensus 39 ~~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~~~-g~~~~~~R~~~~~~-fs~~~l 111 (411)
T 2jjn_A 39 EKQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI-EGASPTPGMIHEID-PPEHRALRKVVSSA-FTPRTI 111 (411)
T ss_dssp HHCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-TTCCCCTTCGGGCC-TTHHHHHHHHHHHH-SCHHHH
T ss_pred HhCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-CcccccccccccCC-chHHHHHHHHhhhh-cCHHHH
Confidence 49998 56667899999999999999754 46877764321 11112234677777 99999999999987 899999
Q ss_pred HHhHHHHHHHHHHHHHH
Q 038677 84 EKLKHVREYELKTCLKE 100 (186)
Q Consensus 84 ~~~~~~~~~~~~~l~~~ 100 (186)
+.+.+.+.++++.+++.
T Consensus 112 ~~~~~~i~~~~~~ll~~ 128 (411)
T 2jjn_A 112 SDLEPRIRDVTRSLLAD 128 (411)
T ss_dssp HTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999876
No 63
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.42 E-value=2.7e-13 Score=101.12 Aligned_cols=159 Identities=9% Similarity=0.001 Sum_probs=101.8
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc-hhHHH------HhhCCCCceeeccCChhHHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAAE------ILGYNFSMFGFSPYDFYWRETHKIATL 75 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~-~~~~~------~~~~~~~~~~~~~~g~~w~~~Rk~~~~ 75 (186)
++|||++++.+|+.. ++|++++.+++|+.+.. +..... ..... .....+.++++.+ |+.|+++|+++++
T Consensus 42 r~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~Rr~~~~ 117 (416)
T 3p3o_A 42 AEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-GADHRRLRGLATH 117 (416)
T ss_dssp HHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-HHHHHHHHHTTCG
T ss_pred HHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-chHHHHHHHHHHH
Confidence 578999999987666 99999999999997542 322211 11000 0000012566777 9999999999998
Q ss_pred hhcCHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhh----------c--------------ccccc
Q 038677 76 ELLSNYRLEKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLAD----------S--------------IHALP 131 (186)
Q Consensus 76 ~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~--------------~~~~p 131 (186)
. |+.+.++.+.+.+.+.++.+++.+ .. + .+|+...+.. + ...+.
T Consensus 118 ~-fs~~~l~~~~~~i~~~~~~ll~~l-~~------g----~~d~~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~ 185 (416)
T 3p3o_A 118 P-FTPRRITAVQPFVRSTVEQLIDKL-PQ------G----DFDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETNL 185 (416)
T ss_dssp G-GSHHHHHHHHHHHHHHHHHHHHTC-CS------S----SEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHTTCG
T ss_pred h-hCHHHHHHHHHHHHHHHHHHHHhh-cc------C----CccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 7 899999999999999999999888 21 1 1232222111 0 00111
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 132 FLIWLDIGGDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 132 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
.+.........++..++...+.+++.++|+++++.. .+|+++.|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~ll~ 231 (416)
T 3p3o_A 186 GLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP--------GDDLTSDIVR 231 (416)
T ss_dssp GGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred hcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCC--------CccHHHHHHH
Confidence 110000112345667788889999999999887641 1488888763
No 64
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.39 E-value=7.1e-13 Score=98.55 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=76.3
Q ss_pred cccCCeeEEee-CCee-EEEecCHHHHHHHHHhccccccCCCchhHHH----H-hhCCCCceeeccCChhHHHHHHHHHH
Q 038677 3 DKYGPIFTIKM-GINR-ALVVSNWEMAKECLTTHDKVFASRPKTLAAE----I-LGYNFSMFGFSPYDFYWRETHKIATL 75 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~-~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~----~-~~~~~~~~~~~~~g~~w~~~Rk~~~~ 75 (186)
++||||+++++ ++.+ .++|+||+++++|+.+ ..|.+++...... . ....+.++++++ |+.|+++|+++++
T Consensus 34 ~~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~ 110 (406)
T 1s1f_A 34 MREGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTRLAPHFIPARGAVGFLD-PPDHTRLRRSVAA 110 (406)
T ss_dssp HHHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCBSSSSCSSCTTSGGGCC-TTHHHHHHHHHHH
T ss_pred HhcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcccccccccccccccccCC-chHHHHHHHHHHH
Confidence 47999999996 5665 9999999999999974 4576665432110 1 111134677777 9999999999998
Q ss_pred hhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 76 ELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 76 ~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
. |+.+.++.+.+.+.++++.+++.|.
T Consensus 111 ~-fs~~~l~~~~~~i~~~~~~l~~~l~ 136 (406)
T 1s1f_A 111 A-FTARGVERVRERSRGMLDELVDAML 136 (406)
T ss_dssp H-HSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-hCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 8999999999999999999999997
No 65
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.36 E-value=1.5e-12 Score=96.42 Aligned_cols=157 Identities=11% Similarity=0.037 Sum_probs=98.2
Q ss_pred ccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHHHH
Q 038677 4 KYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNYRL 83 (186)
Q Consensus 4 ~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l 83 (186)
++|||+++..| .++|++++.+++++.. ..|+.++..........++.++++.+ |+.|+++|+++++. |+.+.+
T Consensus 31 ~~~pv~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~-fs~~~~ 103 (394)
T 2wiy_A 31 QDHPVHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRRQTNKW-FTPKLV 103 (394)
T ss_dssp HHCSEEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHHHHHTT-CSHHHH
T ss_pred hcCCeEEecCC---eEEEcCHHHHHHHHcC--CCccccccccccccchhcccccccCC-chHHHHHHHHHHhc-cCHHHH
Confidence 46899987543 7899999999999953 34544322211111111123566667 99999999999987 899999
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHhHHHHHhhc--------------cc---ccccc-----c--ccCCC
Q 038677 84 EKLKHVREYELKTCLKELYQLWDNNKSTNKMLLVEMKRWLADS--------------IH---ALPFL-----I--WLDIG 139 (186)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~p~l-----~--~l~~~ 139 (186)
+.+.+.+.+.++.+++.+. ..+ ++|+...+..+ .+ +..++ . ..|..
T Consensus 104 ~~~~~~i~~~~~~l~~~~~------~~~----~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~p~~ 173 (394)
T 2wiy_A 104 DGWVRTTRELVGDLLDGVE------AGQ----VIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLMQSAEPAD 173 (394)
T ss_dssp HHHTHHHHHHHHHHHHTCC------TTC----CEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGGGSSSCCT
T ss_pred HHHHHHHHHHHHHHHHHHh------ccC----CeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHhccCCccc
Confidence 9999999999999988875 111 34444433332 00 00000 0 11111
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcCcccHHHhhhc
Q 038677 140 GDERSMKKIAKELDFVVQGWLEEHKRKRDSQEMNKEEEDFMYAMRS 185 (186)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 185 (186)
....+..++...+.+++.++|+++++.. .+|+++.|++
T Consensus 174 ~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~Ll~ 211 (394)
T 2wiy_A 174 GDVDRAAVAFGYLSARVAEMLEDKRVNP--------GDGLADSLLD 211 (394)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCC--------CCcHHHHHHH
Confidence 2234455566788889999998877531 1378877763
No 66
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.30 E-value=2e-12 Score=94.04 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=70.4
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc-hhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNY 81 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~ 81 (186)
++||||+++ | .++|++|+++++|+.+. ..|++++. +.. .. ++.++++++ |+.|+++|+++++. |+.+
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~---~~~~l~~~~-g~~~~~~R~~~~~~-fs~~ 69 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA---GGISFITMD-NPEHKEFRDISAPY-FLPS 69 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCGGGGCC-HHHHHHHHHHHHHH-HSHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc---cccccccCC-chHHHHHHHHhhhh-cCHH
Confidence 589999986 3 89999999999999764 46777752 221 11 234677777 99999999999987 8999
Q ss_pred HHHHhHHHHHHHHHHHHHHHH
Q 038677 82 RLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 82 ~l~~~~~~~~~~~~~l~~~l~ 102 (186)
+++.+.+.+.++++.+++.|.
T Consensus 70 ~l~~~~~~i~~~~~~l~~~l~ 90 (343)
T 2rfb_A 70 KINDYKDFIEETSNDLIKNID 90 (343)
T ss_dssp HHGGGHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999988774
No 67
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.24 E-value=1.1e-11 Score=91.07 Aligned_cols=92 Identities=17% Similarity=0.140 Sum_probs=72.2
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc--hhHHH-----H--hhC-CCCceeeccCChhHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK--TLAAE-----I--LGY-NFSMFGFSPYDFYWRETHKI 72 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~--~~~~~-----~--~~~-~~~~~~~~~~g~~w~~~Rk~ 72 (186)
++||||+++ | +.+++++|+++++|+.+ ...|++++. ..... . ++. .+.++++++ |+.|+++|++
T Consensus 9 r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~~h~~~R~~ 82 (368)
T 1io7_A 9 RKKDPVYYD--G--NIWQVFSYRYTKEVLNN-FSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-PPLHDELRSM 82 (368)
T ss_dssp HHHCSEEEC--S--SCEEECSHHHHHHHHHC-TTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-TTHHHHHHGG
T ss_pred HhcCCeEeE--C--CEEEEecHHHHHHHHcC-cccccccccccccccccccccccccccccccccccCC-ChHHHHHHHH
Confidence 579999987 4 58999999999999975 356888764 11111 1 111 114677777 9999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHH
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKEL 101 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l 101 (186)
+++. |+.+.++.+.+.+.++++.+++.|
T Consensus 83 ~~~~-f~~~~~~~~~~~i~~~~~~l~~~l 110 (368)
T 1io7_A 83 SADI-FSPQKLQTLETFIRETTRSLLDSI 110 (368)
T ss_dssp GTTT-TCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhh-cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9987 899999999999999999999888
No 68
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.17 E-value=1e-11 Score=94.26 Aligned_cols=95 Identities=14% Similarity=0.023 Sum_probs=68.8
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch-hHH-HHhhCCCCcee-eccCChhHHHHHHHHHHhh
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-LAA-EILGYNFSMFG-FSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~-~~~-~~~~~~~~~~~-~~~~g~~w~~~Rk~~~~~~ 77 (186)
|+++|||||++++|+.+.|+|+||+++++|+.++.. +..++.. ... ..++ .+++ ..+ |+.|+++|+.+.+.
T Consensus 42 ~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~~~~~~g---~~~~~~~~-g~~w~~~r~~~~~~- 115 (491)
T 3dax_A 42 NQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFATSAKAFG---HRSIDPMD-GNTTENINDTFIKT- 115 (491)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHHHHHHHT---CCCCCGGG-TSBCCCHHHHHHHH-
T ss_pred HHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHHHHHHcC---CCcccccc-hhHHHHHHHHHHHh-
Confidence 468999999999999999999999999999965432 2222222 111 2232 2445 566 89999999999986
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHH
Q 038677 78 LSNYRLEKLKHVREYELKTCLKEL 101 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l 101 (186)
|+..+++.+.+.+.+++..++...
T Consensus 116 f~~~~l~~~~~~~~~~~~~~l~~~ 139 (491)
T 3dax_A 116 LQGHALNSLTESMMENLQRIMRPP 139 (491)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHC--
T ss_pred cCcccHHHHHHHHHHHHHHHHHhh
Confidence 799888888888877777666544
No 69
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.15 E-value=2.9e-11 Score=91.36 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=67.4
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch-hHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-LAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++||||+++++|+.+.++|++|+++++++.+... ++.++.. ....... + .++++++ |+.| |+++.+. |+
T Consensus 47 l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~~~~~-g-~~~~~~~-~~~~---R~~~~~~-f~ 118 (475)
T 3b98_A 47 MKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLMKRIF-N-MILPSHN-PESE---KKRAEMH-FQ 118 (475)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHHHHTT-C-CCCTTCC-HHHH---HHHHHHH-TS
T ss_pred HHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHHHHHh-C-CCCCCCC-hHHH---HHHHHHH-cC
Confidence 467899999999999999999999999999965432 3322221 1222121 2 2455555 7655 6777776 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
.++++.+.+.+.+++..+++.+.
T Consensus 119 ~~~l~~~~~~~~~~~~~~l~~~~ 141 (475)
T 3b98_A 119 GASLTQLSNSMQNNLRLLMTPSE 141 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTT
T ss_pred hhhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999988888877654
No 70
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.10 E-value=8.2e-12 Score=92.57 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=71.0
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHHhcccccc-C-CCch--hHHH--HhhC-CCCceeeccCChhHHHHHHHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFA-S-RPKT--LAAE--ILGY-NFSMFGFSPYDFYWRETHKIAT 74 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~~~~~~~~-~-r~~~--~~~~--~~~~-~~~~~~~~~~g~~w~~~Rk~~~ 74 (186)
++||||+++++ |+.+.++++||+++++++.++ .|+ + ++.. .... .+.. .+.+++++ .|+++|++++
T Consensus 26 ~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~h~~~R~~~~ 99 (396)
T 1n40_A 26 RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI----ADAGLRKAVM 99 (396)
T ss_dssp HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH----HHTTCHHHHH
T ss_pred HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH----HHHHHHHHHH
Confidence 68999999997 789999999999999999754 355 4 4321 1110 0000 11245554 9999999999
Q ss_pred HhhcCHHHHHHhHHHHHHHHHHHHHHHHH
Q 038677 75 LELLSNYRLEKLKHVREYELKTCLKELYQ 103 (186)
Q Consensus 75 ~~~f~~~~l~~~~~~~~~~~~~l~~~l~~ 103 (186)
+. |+.+ ++.+.+.+.++++.+++.|..
T Consensus 100 ~~-fs~~-~~~~~~~i~~~~~~l~~~l~~ 126 (396)
T 1n40_A 100 KA-ITPK-APGLEQFLRDTANSLLDNLIT 126 (396)
T ss_dssp HH-TSSC-STTHHHHHHHHHHHHHHHHHH
T ss_pred Hh-hChH-HHHhHHHHHHHHHHHHHHHHh
Confidence 87 8999 999999999999999999973
No 71
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.09 E-value=7.2e-10 Score=82.70 Aligned_cols=83 Identities=12% Similarity=-0.013 Sum_probs=62.0
Q ss_pred eEEEecCHHHHHHHHHhccccccCCCchhHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHH
Q 038677 17 RALVVSNWEMAKECLTTHDKVFASRPKTLAAEILGYNFSMFGFSPYDFYWRETHKIATLELLSNYRLEKLKHVREYELKT 96 (186)
Q Consensus 17 ~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~ 96 (186)
...+|+.++.+++|+. ....|+.+...............++.++ |++|+++|+++++. |+.++++.+.+.+.+.++.
T Consensus 62 g~W~vtr~~dv~~vl~-d~~~fs~~~~~~~~~~~~~~~~~~~~~D-~p~H~r~Rrll~~~-Fs~~~l~~~~~~i~~~~~~ 138 (417)
T 4dxy_A 62 GHWIATNGDTVKEVYS-DPTRFSSEVIFLPKEAGEKAQMVPTKMD-PPEHTPYRKALDKG-LNLAKIRKVEDKVREVASS 138 (417)
T ss_dssp SEEEECSHHHHHHHHT-CTTTEESSCCSSSTTSSCSSCTTTTTCC-TTTHHHHHHHHHHH-HCHHHHHTTHHHHHHHHHH
T ss_pred CEEEECCHHHHHHHHc-CchhccCCCcccccccccccccCcccCC-cHHHHHHHHHhhhh-cCHHHHHHHHHHHHHHHHH
Confidence 4678999999999995 3456765543211111111122345566 99999999999987 8999999999999999999
Q ss_pred HHHHHH
Q 038677 97 CLKELY 102 (186)
Q Consensus 97 l~~~l~ 102 (186)
+++.+.
T Consensus 139 lld~l~ 144 (417)
T 4dxy_A 139 LIDSFA 144 (417)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999997
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.07 E-value=5.2e-11 Score=87.41 Aligned_cols=91 Identities=16% Similarity=0.035 Sum_probs=69.6
Q ss_pred cccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCc-hh-HH-----H-HhhCC--CCceeeccCChhHHHHHHH
Q 038677 3 DKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TL-AA-----E-ILGYN--FSMFGFSPYDFYWRETHKI 72 (186)
Q Consensus 3 ~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~-~~-~~-----~-~~~~~--~~~~~~~~~g~~w~~~Rk~ 72 (186)
++||||+++. | .+++++|+.+++|+.+. ..|++++. .. .. . .+.+. ..++++++ |+.|+++|++
T Consensus 9 r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~ 82 (367)
T 3b4x_A 9 RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-PPLHDELRNL 82 (367)
T ss_dssp HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-TTHHHHHHHT
T ss_pred HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-chhHHHHHHH
Confidence 4799999987 3 89999999999999754 46777642 22 12 1 11110 14688887 9999999999
Q ss_pred HHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 73 ATLELLSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 73 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
+++. |+.+.++. +.+.+.++.+++.|.
T Consensus 83 ~~~~-fs~~~l~~--~~i~~~~~~l~~~l~ 109 (367)
T 3b4x_A 83 TADA-FNPSNLPV--DFVREVTVKLLSELD 109 (367)
T ss_dssp TGGG-GSGGGSCH--HHHHHHHHHHHHTCC
T ss_pred HHHh-cCHhhhcc--hHHHHHHHHHHHhcc
Confidence 9987 89998877 999999999988774
No 73
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.03 E-value=5.1e-10 Score=85.12 Aligned_cols=94 Identities=17% Similarity=0.065 Sum_probs=64.2
Q ss_pred CccccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch-hHHHHhhCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 1 MADKYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-LAAEILGYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 1 ~~~~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
|+++|||||++++|+.++|+|+||+++++++.++...+..++.. ....... + .++++.+ |+.| |+++.+. |+
T Consensus 47 l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~-~~~~---rr~~~~~-~~ 119 (498)
T 3b6h_A 47 MKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIF-D-VQLPHYS-PSDE---KARMKLT-LL 119 (498)
T ss_dssp HHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHHHTS-C-CCCTTCC-HHHH---HHHHHTT-SS
T ss_pred HHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHHHHc-C-CCccccC-HHHH---HHHHHHh-hc
Confidence 46899999999999999999999999999997554323333322 1222222 2 2455555 7766 4556655 78
Q ss_pred HHHHHHhHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKEL 101 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l 101 (186)
...++.+.+.+.+++...+...
T Consensus 120 ~~~l~~~~~~~~~~~~~~l~~~ 141 (498)
T 3b6h_A 120 HRELQALTEAMYTNLHAVLLGD 141 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHhhc
Confidence 8888888777777776666544
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=98.89 E-value=3.7e-09 Score=78.76 Aligned_cols=95 Identities=14% Similarity=0.044 Sum_probs=70.0
Q ss_pred ccCCeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCchhH---HHHh-hCCCCceeeccCChhHHHHHHHHHHhhcC
Q 038677 4 KYGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA---AEIL-GYNFSMFGFSPYDFYWRETHKIATLELLS 79 (186)
Q Consensus 4 ~yG~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~~~---~~~~-~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~ 79 (186)
++|||++ .++.+.++|++++.+++|+. ....|+....... .... .....++++++ |+.|+++|+++++. |+
T Consensus 45 ~~gPV~~--~~~~~~~~vt~~~~v~~vl~-d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~D-g~~H~r~R~~~~~~-Fs 119 (412)
T 4dnj_A 45 EAGPVVY--LDKWNVYGVARYAEVYAVLN-DPLTFCSSRGVGLSDFKKEKPWRPPSLILEAD-PPAHTRTRAVLSKV-LS 119 (412)
T ss_dssp HHCSSEE--ETTTTEEEECSHHHHHHHHT-CTTTEESTTCSSSSCTTTSCCSSCCCTTTTCC-TTHHHHHHHHHHHH-TC
T ss_pred hcCCEEE--ECCCCEEEECCHHHHHHHHc-CCccccCCCccccccccccccccCCCccccCC-hHHHHHHHhhcccc-cC
Confidence 5699975 45667899999999999995 3345544322111 0001 11223466667 99999999999987 89
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHH
Q 038677 80 NYRLEKLKHVREYELKTCLKELYQ 103 (186)
Q Consensus 80 ~~~l~~~~~~~~~~~~~l~~~l~~ 103 (186)
.++++.+.+.+.+.++.+++.+.+
T Consensus 120 ~~~l~~~~~~i~~~~~~l~~~~~~ 143 (412)
T 4dnj_A 120 PATMKRLRDGFAAAADAKIDELLA 143 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhhhc
Confidence 999999999999999999999863
No 75
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=98.87 E-value=1.8e-09 Score=81.49 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=64.8
Q ss_pred ccccCC-eeEEeeC-------CeeEEEecCHHHHHHHHHh----ccccccCCCchhHHHHhhCC-CCceeeccCChhHHH
Q 038677 2 ADKYGP-IFTIKMG-------INRALVVSNWEMAKECLTT----HDKVFASRPKTLAAEILGYN-FSMFGFSPYDFYWRE 68 (186)
Q Consensus 2 ~~~yG~-i~~~~~~-------~~~~i~v~~~~~~~~v~~~----~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~g~~w~~ 68 (186)
+++||| ||+++++ .+..|++++....+.++.. +...+.+..+... ..+++. ..+++..+ |+.|++
T Consensus 44 ~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~h~~ 121 (473)
T 3dan_A 44 MQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPST-KLTGGYRVLSYLDPS-EPRHAQ 121 (473)
T ss_dssp HHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSSCCCG-GGGTTSCCGGGCCTT-SHHHHH
T ss_pred HHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcceeccccccccccCCc-cccCCCcceeeeCCC-cHHHHH
Confidence 578999 9999986 3455566666655444421 1122222211111 222211 22445556 999999
Q ss_pred HHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHH
Q 038677 69 THKIATLELLSNYRLEKLKHVREYELKTCLKELYQ 103 (186)
Q Consensus 69 ~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~ 103 (186)
+|+++++. |+.+ ++.+.+.+.+.++.+++.|..
T Consensus 122 ~R~~~~~~-f~~~-~~~~~~~i~~~~~~ll~~~~~ 154 (473)
T 3dan_A 122 LKNLLFFM-LKNS-SNRVIPQFETTYTELFEGLEA 154 (473)
T ss_dssp HHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 7884 899999999999999999973
No 76
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=98.82 E-value=3.9e-10 Score=85.72 Aligned_cols=98 Identities=8% Similarity=0.073 Sum_probs=67.3
Q ss_pred ccccCC-eeEEeeCCeeE-------EEecCHHHHHHHHHhcc----ccccCCCchhHHHHhhCC-CCceeeccCChhHHH
Q 038677 2 ADKYGP-IFTIKMGINRA-------LVVSNWEMAKECLTTHD----KVFASRPKTLAAEILGYN-FSMFGFSPYDFYWRE 68 (186)
Q Consensus 2 ~~~yG~-i~~~~~~~~~~-------i~v~~~~~~~~v~~~~~----~~~~~r~~~~~~~~~~~~-~~~~~~~~~g~~w~~ 68 (186)
+++||| ||++++++.+. |++++++..+.++.... ..+....+... ..++.. ..+++..+ |+.|++
T Consensus 62 ~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~-g~~h~~ 139 (495)
T 3dsk_A 62 IRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYMPST-ELTGGYRILSYLDPS-EPKHEK 139 (495)
T ss_dssp HHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSSCCCG-GGGTTCCCGGGCCTT-SHHHHH
T ss_pred HHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccccccccccccCCCCc-cccCCCcceeeeCCC-chHHHH
Confidence 579999 99999988777 67777777666553211 22222211112 333322 22344445 999999
Q ss_pred HHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHH
Q 038677 69 THKIATLELLSNYRLEKLKHVREYELKTCLKELYQ 103 (186)
Q Consensus 69 ~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~ 103 (186)
+|+++.+. |+... +.+.+.+.+.++.+++.|.+
T Consensus 140 ~R~~~~~~-f~~~~-~~~~~~i~~~~~~ll~~~~~ 172 (495)
T 3dsk_A 140 LKNLLFFL-LKSSR-NRIFPEFQATYSELFDSLEK 172 (495)
T ss_dssp HHHHHHHH-HHHTT-TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 99999987 77754 88999999999999999974
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=89.06 E-value=0.0036 Score=46.07 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=48.7
Q ss_pred CeeEEeeCCeeEEEecCHHHHHHHHHhccccccCCCch---hH------HHHhhCCCCceeeccCChhHHHHHHHHHHhh
Q 038677 7 PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT---LA------AEILGYNFSMFGFSPYDFYWRETHKIATLEL 77 (186)
Q Consensus 7 ~i~~~~~~~~~~i~v~~~~~~~~v~~~~~~~~~~r~~~---~~------~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~ 77 (186)
||++.. .+.+++++++.+++|+.+ ..|+.++.. .. ...+ + .++++++ |+.| ++.
T Consensus 72 pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~~~~~~~~~~~~--~-~~l~~~d-g~~H-------~~~- 134 (381)
T 2yjn_B 72 GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPEWMRAAGAPPAEW--A-QPFRDVH-AASW-------EGE- 134 (381)
T ss_dssp CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHHHHHHTCCHHHH--T-HHHHHHH-HCCC-------CSC-
T ss_pred CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccccccccccccchh--h-hhhhhCC-chhh-------hhc-
Confidence 888753 568999999999999975 356655321 10 1112 2 3677777 9999 555
Q ss_pred cCHHHHHHhHHHHHHHHHHHHHHHH
Q 038677 78 LSNYRLEKLKHVREYELKTCLKELY 102 (186)
Q Consensus 78 f~~~~l~~~~~~~~~~~~~l~~~l~ 102 (186)
|+ . .+.+.+.++.+++.|.
T Consensus 135 Ft-----~-~~~i~~~~~~ll~~~~ 153 (381)
T 2yjn_B 135 VP-----D-VGELAESFAGLLPGAG 153 (381)
T ss_dssp CC-----C-CSCHHHHTSTTSCC--
T ss_pred cC-----C-hHHHHHHHHHHHHhcc
Confidence 77 3 7777788887777764
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=70.47 E-value=8.9 Score=22.07 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=27.2
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHHhccccccC
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLTTHDKVFAS 40 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~~~~~~~~~ 40 (186)
.+||+|..+.+. |.-+|...+++.++.++...+..+.+
T Consensus 33 ~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~g 78 (103)
T 1s79_A 33 EDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKE 78 (103)
T ss_dssp HTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTT
T ss_pred hhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECC
Confidence 578999888763 45678889999999998633333433
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.47 E-value=17 Score=20.90 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=29.2
Q ss_pred cccC-CeeEEeeCCeeEEEecCHHHHHHHHHh-ccccccCCC
Q 038677 3 DKYG-PIFTIKMGINRALVVSNWEMAKECLTT-HDKVFASRP 42 (186)
Q Consensus 3 ~~yG-~i~~~~~~~~~~i~v~~~~~~~~v~~~-~~~~~~~r~ 42 (186)
.+|| +|..+ .+|.-+|...+.+.++..+.. ++..+-+|+
T Consensus 35 ~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 35 DNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp HTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred HHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 5794 99888 679999999999999988852 333344554
No 80
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=52.14 E-value=11 Score=19.70 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=22.3
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHhc
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTTH 34 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~~ 34 (186)
.+||+|..+.+. +.-+|...+++.++.++...
T Consensus 21 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 21 GGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp HHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred HhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 467887777652 23567778888888888643
No 81
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=51.59 E-value=25 Score=20.23 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=28.0
Q ss_pred ccccCCeeEEeeC------------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 2 ADKYGPIFTIKMG------------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 2 ~~~yG~i~~~~~~------------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
..+||+|..+.+. +.-+|...+++.++..+.. ++..+.++
T Consensus 39 F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~gr 91 (111)
T 2cpi_A 39 FGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 91 (111)
T ss_dssp TTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred hhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECCE
Confidence 3678998888764 2456788899999999864 44444443
No 82
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=50.23 E-value=21 Score=18.59 Aligned_cols=31 Identities=3% Similarity=0.049 Sum_probs=22.2
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|...+++.++.++.-
T Consensus 21 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 21 EQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp HTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred HhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 468888777753 2356777899998888753
No 83
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=49.05 E-value=34 Score=19.39 Aligned_cols=31 Identities=16% Similarity=0.009 Sum_probs=24.0
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. |.-+|...+++.++.++..
T Consensus 43 ~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 43 SKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp GGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred hcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 578999888875 4567888888888888864
No 84
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=48.50 E-value=30 Score=18.39 Aligned_cols=30 Identities=17% Similarity=0.004 Sum_probs=23.9
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 29 ~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 29 SKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred hhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 578999888875 356788889999998885
No 85
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=47.93 E-value=28 Score=19.96 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=26.5
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. |.-+|...+++.++..+.. ++..|.+|
T Consensus 49 ~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~lng~~~~Gr 96 (104)
T 1jmt_A 49 EKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ 96 (104)
T ss_dssp HHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred ccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHHCCCEECCE
Confidence 689999998874 3456777799988887753 33334443
No 86
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=44.86 E-value=26 Score=18.84 Aligned_cols=32 Identities=9% Similarity=0.171 Sum_probs=22.6
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHhc
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTTH 34 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~~ 34 (186)
.+||+|..+.+. +.-+|...+++.++.++...
T Consensus 33 ~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 33 TKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp TTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred HhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 578888877752 13567778888888888543
No 87
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=44.75 E-value=39 Score=19.40 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=26.5
Q ss_pred ccccCCeeEEeeC----------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 2 ADKYGPIFTIKMG----------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 2 ~~~yG~i~~~~~~----------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
..+||+|..+++. |.-+|-..+++.+...+.. ++..|.+|
T Consensus 34 f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 34 CEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp GGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 3689999888763 2346777899888887753 33445444
No 88
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.57 E-value=39 Score=18.68 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=23.8
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.++ +.-+|...+++.++.++..
T Consensus 35 ~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 35 SPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp TTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred hhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 578998888874 4567778899988888853
No 89
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=43.97 E-value=44 Score=19.12 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=26.7
Q ss_pred cccCCeeEEeeC-----------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG-----------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~-----------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. |.-+|-..+++.++..+.. ++..|.+|
T Consensus 37 ~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR 87 (105)
T 3v4m_A 37 SKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 87 (105)
T ss_dssp HTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCC
Confidence 589999999874 3346788899988887742 33344444
No 90
>1fry_A Myeloid antimicrobial peptide; random-ordered coil-loop, antimicrobial protein; NMR {Synthetic} SCOP: j.93.1.1
Probab=43.23 E-value=6 Score=16.28 Aligned_cols=7 Identities=57% Similarity=1.198 Sum_probs=4.9
Q ss_pred cccCCee
Q 038677 3 DKYGPIF 9 (186)
Q Consensus 3 ~~yG~i~ 9 (186)
++|||.+
T Consensus 15 kkygptv 21 (29)
T 1fry_A 15 KKYGPTV 21 (29)
T ss_dssp TTTSSSC
T ss_pred hhcCCce
Confidence 6788743
No 91
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=42.88 E-value=41 Score=18.45 Aligned_cols=30 Identities=17% Similarity=0.310 Sum_probs=23.6
Q ss_pred cccCCeeEEeeC------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 34 ~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 69 (97)
T 1nu4_A 34 SRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALR 69 (97)
T ss_dssp GGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHH
T ss_pred HhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHH
Confidence 578998888764 456788889998888885
No 92
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=40.42 E-value=38 Score=19.91 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=26.9
Q ss_pred cccCCeeEEeeC-----CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG-----INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~-----~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. |.-+|-..+++.++..+.. ++..|.+|
T Consensus 39 ~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~GR 83 (114)
T 3s6e_A 39 NKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGK 83 (114)
T ss_dssp TTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETTE
T ss_pred hccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 589999888863 4567777899888877742 33445444
No 93
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.35 E-value=49 Score=18.32 Aligned_cols=31 Identities=10% Similarity=0.033 Sum_probs=23.5
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 39 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 39 KAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp TTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 578998887763 3457788899999988853
No 94
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=37.80 E-value=65 Score=19.24 Aligned_cols=30 Identities=20% Similarity=0.230 Sum_probs=23.9
Q ss_pred cccCCeeEEeeC------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. |.-+|...+++.+...+.
T Consensus 55 ~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~ 90 (127)
T 2a3j_A 55 SSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVE 90 (127)
T ss_dssp HHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHH
T ss_pred ccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHH
Confidence 579999888763 456888899999998885
No 95
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.47 E-value=58 Score=18.55 Aligned_cols=31 Identities=13% Similarity=0.287 Sum_probs=25.1
Q ss_pred cccCCeeEEeeC----CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG----INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~----~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. |.-+|...+++.+...+..
T Consensus 39 ~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 39 QKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 589999888873 3567888899999999864
No 96
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=36.95 E-value=56 Score=19.22 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=21.0
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.++ +.-+|...+++.++.++.
T Consensus 59 ~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~ 91 (121)
T 2bz2_A 59 SPFGNIIDLSMDPPRNCAFVTYEKMESADQAVA 91 (121)
T ss_dssp STTCCCSCEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HccCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 567877776654 456677778888877774
No 97
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.49 E-value=61 Score=18.53 Aligned_cols=31 Identities=13% Similarity=0.112 Sum_probs=25.5
Q ss_pred ccccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.++||.|..+++. +.-+|-..+++.+..++.
T Consensus 37 F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 37 VEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp TGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred HHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4689999999875 356888999999998885
No 98
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=35.72 E-value=57 Score=17.96 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=25.1
Q ss_pred cccCCeeEEeeC-CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG-INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|...+++.++.++..
T Consensus 33 ~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 33 SPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp TTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred HhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 578998888863 5678888999999999863
No 99
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.70 E-value=54 Score=19.22 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=24.9
Q ss_pred ccccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.++||+|..+++. +.-+|-..+++.++.++.
T Consensus 47 F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 47 AEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp TTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 4689999988874 456888889999888885
No 100
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=35.11 E-value=61 Score=18.13 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=22.9
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 45 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 83 (106)
T 1p27_B 45 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 83 (106)
T ss_dssp GGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHH
T ss_pred hccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 578998888763 235677889999988885
No 101
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=35.10 E-value=52 Score=17.31 Aligned_cols=30 Identities=3% Similarity=0.015 Sum_probs=22.8
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 23 ~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 61 (83)
T 3md1_A 23 KDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMD 61 (83)
T ss_dssp TTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHH
T ss_pred HhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHH
Confidence 578998877753 235788889999998886
No 102
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.64 E-value=65 Score=17.74 Aligned_cols=39 Identities=10% Similarity=0.114 Sum_probs=27.5
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHhccccccCC
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTTHDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~~~~~~~~r 41 (186)
.+||+|..+.+. +.-+|...+++.++.++.-+...+.++
T Consensus 32 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 79 (99)
T 2dgs_A 32 KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 79 (99)
T ss_dssp SSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSC
T ss_pred HhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCe
Confidence 578998888763 245788889999999986444444443
No 103
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.47 E-value=67 Score=17.84 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=24.0
Q ss_pred ccccCCeeEEeeC-------CeeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG-------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~ 32 (186)
..+||+|..+.+. +.-+|...+++.++.++.
T Consensus 36 F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2d9p_A 36 FSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 73 (103)
T ss_dssp TTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHH
T ss_pred HHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHH
Confidence 3679998887764 245778889999999886
No 104
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=32.41 E-value=64 Score=17.58 Aligned_cols=28 Identities=11% Similarity=0.177 Sum_probs=22.9
Q ss_pred cccCCeeEEeeC----CeeEEEecCHHHHHHH
Q 038677 3 DKYGPIFTIKMG----INRALVVSNWEMAKEC 30 (186)
Q Consensus 3 ~~yG~i~~~~~~----~~~~i~v~~~~~~~~v 30 (186)
++||+|..+.+. |--+|...+++.++.+
T Consensus 33 ~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 33 CQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp TTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred hccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 679999998875 5678888999998854
No 105
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=32.22 E-value=40 Score=19.56 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=28.2
Q ss_pred cccCCeeEEeeC-CeeEEEecCHHHHHHHHHh--ccccccCCC
Q 038677 3 DKYGPIFTIKMG-INRALVVSNWEMAKECLTT--HDKVFASRP 42 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~~--~~~~~~~r~ 42 (186)
..||.+.--|+. ..-.+++++|+.+++++.. ....|.-++
T Consensus 27 s~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~t 69 (101)
T 3ctr_A 27 SAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQT 69 (101)
T ss_dssp TTSEEEEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCC
T ss_pred hccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEE
Confidence 467877766775 4788999999999999963 233444443
No 106
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=31.79 E-value=65 Score=17.84 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=26.9
Q ss_pred cccCCeeEEeeC----CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG----INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~----~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 22 ~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 65 (101)
T 2hvz_A 22 SYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 65 (101)
T ss_dssp HHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSC
T ss_pred HhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCc
Confidence 578988877762 4567888899999998863 33334444
No 107
>2dhx_A Poly (ADP-ribose) polymerase family, member 10 variant; RRM domain, RNA- binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.65 E-value=79 Score=18.42 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=25.1
Q ss_pred CCeeEEe-eCCeeEEEecCHHHHHHHHHhccccccC
Q 038677 6 GPIFTIK-MGINRALVVSNWEMAKECLTTHDKVFAS 40 (186)
Q Consensus 6 G~i~~~~-~~~~~~i~v~~~~~~~~v~~~~~~~~~~ 40 (186)
|++-.+. .+..-+|...|++.++.|+.+....+.+
T Consensus 38 G~V~~v~~~~~~AvItF~d~~va~rVL~k~~H~L~~ 73 (104)
T 2dhx_A 38 GPVLSWQRLGCGGVLTFREPADAERVLAQADHELHG 73 (104)
T ss_dssp CCEEEEEEETTEEEEEESSHHHHHHHHTCSCCBSSS
T ss_pred ceeeEEEEcCCcEEEEEcChHHHHHHhcCCcceecC
Confidence 3676666 3567788999999999999763444433
No 108
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=31.18 E-value=58 Score=18.81 Aligned_cols=30 Identities=13% Similarity=0.127 Sum_probs=24.0
Q ss_pred cccCCeeEEeeC-CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG-INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~ 32 (186)
..||.+.--|+. ..-.+++.+|+.+++++.
T Consensus 37 s~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 37 SAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp TTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 467877666775 467889999999999996
No 109
>1wwh_A Nucleoporin 35, nucleoporin; structural genomics, MPPN, riken structural genomics/proteomics initiative, RSGI, protein transport; 2.70A {Mus musculus} SCOP: d.58.7.1
Probab=30.34 E-value=91 Score=18.67 Aligned_cols=37 Identities=19% Similarity=0.376 Sum_probs=26.7
Q ss_pred cccCCeeEEeeC-CeeEEEec--CHHHHHHHHHhcccccc
Q 038677 3 DKYGPIFTIKMG-INRALVVS--NWEMAKECLTTHDKVFA 39 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~--~~~~~~~v~~~~~~~~~ 39 (186)
++||.|+..... +.+++.|. ++..++..|.+++..+.
T Consensus 45 ~~~G~Iv~~~~~~~~NWihI~Y~s~~~A~rAL~kNG~ii~ 84 (119)
T 1wwh_A 45 AQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFG 84 (119)
T ss_dssp HTTSCEEEEEECSSSSEEEEEESSHHHHHHHHTTTTCEET
T ss_pred HhhCcEEEeccCCCCCeEEEEeCCHHHHHHHHHhCCeEec
Confidence 578999988763 45666654 88899999976655553
No 110
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.29 E-value=72 Score=17.48 Aligned_cols=31 Identities=19% Similarity=0.106 Sum_probs=23.6
Q ss_pred cccCCeeEEeeC------------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG------------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~------------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|...+++.++.++..
T Consensus 27 ~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 27 SKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp HTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred HhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 578988877764 2457778899999999864
No 111
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.19 E-value=66 Score=17.01 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=22.1
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 34 ~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~ 66 (85)
T 2ytc_A 34 YQFGEIRTITVVQRQQCAFIQFATRQAAEVAAE 66 (85)
T ss_dssp HTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHH
T ss_pred HhCCCEeEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 468888777753 356777788888888875
No 112
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=29.79 E-value=83 Score=18.07 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=23.9
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 27 ~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 27 SAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp GGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred hccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 579999887753 2357888999999998853
No 113
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=29.63 E-value=74 Score=17.80 Aligned_cols=30 Identities=7% Similarity=0.060 Sum_probs=21.6
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 51 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 88 (107)
T 3ulh_A 51 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMK 88 (107)
T ss_dssp HTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHH
T ss_pred HhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHH
Confidence 468888777653 235677788888888875
No 114
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=29.35 E-value=90 Score=18.34 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=25.7
Q ss_pred cccCCeeEEeeCC-------------eeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMGI-------------NRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~~-------------~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+.. .-+|-..+++.++..+.. ++..|.+|
T Consensus 47 ~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR 99 (118)
T 3ue2_A 47 GKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR 99 (118)
T ss_dssp TTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred hccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 5899999887532 245667799888877742 33445444
No 115
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.30 E-value=78 Score=17.57 Aligned_cols=30 Identities=13% Similarity=0.126 Sum_probs=23.4
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 37 ~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cq3_A 37 GQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 73 (103)
T ss_dssp GGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHH
T ss_pred HhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHH
Confidence 578998888763 346778889999998885
No 116
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=28.42 E-value=91 Score=18.09 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=27.5
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. +.-+|...+++.++.++.. ++..+.++
T Consensus 44 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 92 (126)
T 3ex7_B 44 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 92 (126)
T ss_dssp HTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred HhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 578999888863 3457888999999998853 33444443
No 117
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=28.31 E-value=73 Score=16.96 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=21.8
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+.. .-+|...+++.++.++.
T Consensus 28 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 66 (89)
T 3ucg_A 28 HGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA 66 (89)
T ss_dssp GGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGG
T ss_pred HhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHh
Confidence 5789888776531 35677888998888873
No 118
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.99 E-value=89 Score=17.84 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=27.6
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
.+||+|..+.+. +.-+|...+++.++..+.. ++..+.++
T Consensus 32 ~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 32 SRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp HTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred HhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 579999888873 3567888899999888853 33344444
No 119
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.93 E-value=56 Score=18.61 Aligned_cols=30 Identities=13% Similarity=0.126 Sum_probs=20.0
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~ 32 (186)
++||+|..+.+. +.-+|...+++.++.++.
T Consensus 51 ~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 51 GQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp GGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred HhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 567877766653 345666777777777765
No 120
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.93 E-value=83 Score=17.45 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=22.7
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 35 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2dnm_A 35 EKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73 (103)
T ss_dssp TTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHH
T ss_pred HhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHH
Confidence 578988888764 235777888888888886
No 121
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.93 E-value=73 Score=18.14 Aligned_cols=36 Identities=3% Similarity=-0.025 Sum_probs=23.9
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHhccccc
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTTHDKVF 38 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~~~~~~ 38 (186)
.+||+|..+.+. +.-+|...+++.++.++.-++..+
T Consensus 47 ~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 91 (114)
T 2cq4_A 47 SAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 91 (114)
T ss_dssp TTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEE
T ss_pred HhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEe
Confidence 578888888764 235677778888888773333333
No 122
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.32 E-value=90 Score=17.66 Aligned_cols=31 Identities=19% Similarity=0.119 Sum_probs=24.7
Q ss_pred ccccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.++||.|..+.+. +.-+|-..+.+.++.++.
T Consensus 36 F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 36 GLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp TTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4689999888764 467888889999888875
No 123
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.21 E-value=86 Score=17.38 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=23.8
Q ss_pred ccccCCeeEEeeCC---------eeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMGI---------NRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~ 32 (186)
..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 36 f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 75 (103)
T 2cq0_A 36 FRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 75 (103)
T ss_dssp STTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH
T ss_pred HHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 36789988887632 34778889999999986
No 124
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=27.04 E-value=65 Score=18.69 Aligned_cols=30 Identities=10% Similarity=0.066 Sum_probs=22.6
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 58 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 58 SSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp HTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred HhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 578998877762 235778889999999883
No 125
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=26.89 E-value=93 Score=17.67 Aligned_cols=32 Identities=6% Similarity=0.016 Sum_probs=24.0
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHHhc
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLTTH 34 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~~~ 34 (186)
.+||+|..+.+.. .-+|...+++.++.++...
T Consensus 47 ~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 47 GQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp TTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred HccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 5789988887632 3578888999999988643
No 126
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.75 E-value=69 Score=16.45 Aligned_cols=31 Identities=6% Similarity=-0.004 Sum_probs=18.9
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 22 ~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 61 (77)
T 1uaw_A 22 GQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 61 (77)
T ss_dssp TTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHT
T ss_pred HhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHh
Confidence 467776666542 1335556677777777753
No 127
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.71 E-value=89 Score=17.40 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=27.2
Q ss_pred cccCCeeEEeeCC----------eeEEEecCHHHHHHHHHh--ccccccCC
Q 038677 3 DKYGPIFTIKMGI----------NRALVVSNWEMAKECLTT--HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~~----------~~~i~v~~~~~~~~v~~~--~~~~~~~r 41 (186)
.+||+|..+.+.. .-+|-..+++.++.++.. +...+.++
T Consensus 37 ~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g~ 87 (107)
T 2cph_A 37 STFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGR 87 (107)
T ss_dssp HTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSC
T ss_pred HccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECCC
Confidence 5789998888732 357788899999998864 33444443
No 128
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=26.64 E-value=94 Score=17.65 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=23.0
Q ss_pred cccCCeeEEee-CCeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKM-GINRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~-~~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+ -+.-+|...+++.++.++.
T Consensus 53 ~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~ 83 (108)
T 2jvo_A 53 GPFGPMKEVKILNGFAFVEFEEAESAAKAIE 83 (108)
T ss_dssp TTTSCCCEEEEETTEEEEECSSHHHHHHHHH
T ss_pred HhcCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 57888877775 4567778888888888875
No 129
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=26.57 E-value=79 Score=16.75 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=22.9
Q ss_pred cccCCeeEEeeC----------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG----------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~----------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 26 ~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (88)
T 4a8x_A 26 STYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 65 (88)
T ss_dssp HTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHH
T ss_pred HhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHH
Confidence 468988877752 345788889999999886
No 130
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.49 E-value=89 Score=17.35 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=24.0
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+.. .-+|...+++.++.++..
T Consensus 37 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 37 LQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp HTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred HhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 5789988887643 357888899999999864
No 131
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=26.11 E-value=84 Score=16.89 Aligned_cols=30 Identities=10% Similarity=0.111 Sum_probs=22.1
Q ss_pred cccCCeeEEeeC-------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG-------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~-------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 30 ~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~ 66 (92)
T 2dgv_A 30 NECGHVLYADIKMENGKSKGCGVVKFESPEVAERACR 66 (92)
T ss_dssp HTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHH
T ss_pred HhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHH
Confidence 568888877653 245677789999888875
No 132
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=25.89 E-value=86 Score=16.97 Aligned_cols=30 Identities=10% Similarity=0.086 Sum_probs=22.4
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 38 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 38 LQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp GGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred HhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 578988887763 235677788888888885
No 133
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.40 E-value=72 Score=17.80 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=26.1
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHHhccccccC
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLTTHDKVFAS 40 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~~~~~~~~~ 40 (186)
.+||+|..+.+.. .-+|...+++.++.++..+...+.+
T Consensus 38 ~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~g 84 (105)
T 2dh8_A 38 SQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDG 84 (105)
T ss_dssp HTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEETT
T ss_pred HhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeECC
Confidence 5789888777532 3567788999999998764334433
No 134
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=25.10 E-value=97 Score=17.27 Aligned_cols=30 Identities=10% Similarity=0.010 Sum_probs=22.1
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~ 32 (186)
++||+|..+.+.. .-+|-..+++.++.++.
T Consensus 41 ~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 79 (99)
T 4fxv_A 41 SSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79 (99)
T ss_dssp HTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHH
T ss_pred HhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHH
Confidence 5789988877531 23677889999988875
No 135
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.87 E-value=1e+02 Score=17.44 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=23.8
Q ss_pred cccCCeeEEeeC-CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG-INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~-~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||.+..+++. +.-+|...+.+.+..++.-
T Consensus 37 ~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~m 68 (91)
T 2dnr_A 37 ASFGEVILIRFVEDKMWVTFLEGSSALNVLSL 68 (91)
T ss_dssp HTTCCEEEEEECSSSEEEEESSHHHHHHGGGG
T ss_pred HhCCCeEEEEEecCCEEEEECChHHHHHHHhc
Confidence 468998888864 5678888898888877753
No 136
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.56 E-value=95 Score=16.99 Aligned_cols=30 Identities=17% Similarity=0.122 Sum_probs=23.6
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 30 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 30 SAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp HTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred HhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 578999888873 245788889999999884
No 137
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=24.19 E-value=1e+02 Score=17.13 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=23.9
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. |.-+|...+++.++..+.
T Consensus 34 ~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 34 SKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp HTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 578999988864 345788889999998885
No 138
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.48 E-value=1.1e+02 Score=17.55 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=24.1
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 38 ~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 38 LPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp HHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 578998888864 467888889999888885
No 139
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.47 E-value=1.1e+02 Score=17.39 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=24.4
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHHhc
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLTTH 34 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~~~ 34 (186)
.+||+|..+.+.. .-+|...+++.++.++..-
T Consensus 39 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 39 EGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp HTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred HhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 5789988887643 3577888999999998643
No 140
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.32 E-value=1e+02 Score=16.91 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=22.2
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 37 ~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~ 69 (99)
T 2cpj_A 37 EKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKV 69 (99)
T ss_dssp STTCCCSEEEEETTTTEEEEECSSSHHHHHHHH
T ss_pred hhcCCeEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 578888877764 356677788888888874
No 141
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.08 E-value=1.1e+02 Score=17.21 Aligned_cols=31 Identities=6% Similarity=-0.076 Sum_probs=24.0
Q ss_pred cccCCeeEEeeC--CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG--INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~--~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|...+++.++..+..
T Consensus 37 ~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 37 REAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp GGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred HhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 578988887763 5677888899988888863
No 142
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=22.94 E-value=1.2e+02 Score=18.24 Aligned_cols=30 Identities=23% Similarity=0.103 Sum_probs=23.8
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~ 32 (186)
++||+|..+.+. +.-+|...+++.++.++.
T Consensus 22 ~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 22 QVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp GGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred HhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 579999888763 346788889999999984
No 143
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.66 E-value=1.2e+02 Score=17.31 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=23.5
Q ss_pred ccccCCeeEEeeC-----CeeEEEecCHHHHHHHHH
Q 038677 2 ADKYGPIFTIKMG-----INRALVVSNWEMAKECLT 32 (186)
Q Consensus 2 ~~~yG~i~~~~~~-----~~~~i~v~~~~~~~~v~~ 32 (186)
..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 47 f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~ 82 (112)
T 2dit_A 47 CSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQ 82 (112)
T ss_dssp GGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHH
T ss_pred HHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHH
Confidence 3689998887763 456777889998888885
No 144
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.34 E-value=86 Score=17.89 Aligned_cols=31 Identities=6% Similarity=0.071 Sum_probs=23.2
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHHh
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLTT 33 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~~ 33 (186)
.+||+|..+.+. +.-+|...+++.++.++..
T Consensus 49 ~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 49 EQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp TSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred HhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 578888777653 2456778899999999865
No 145
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=21.91 E-value=1.2e+02 Score=17.05 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=22.9
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 48 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 48 CDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp GGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred HhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 578988888763 345777888998888875
No 146
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=21.76 E-value=99 Score=16.20 Aligned_cols=30 Identities=17% Similarity=0.045 Sum_probs=22.4
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 29 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 29 IPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp GGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred hccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 578988888762 235778888998888874
No 147
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=21.70 E-value=1.2e+02 Score=17.16 Aligned_cols=30 Identities=33% Similarity=0.454 Sum_probs=23.2
Q ss_pred cccCCeeEEeeC------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.+..++.
T Consensus 30 ~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 30 GKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp HTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred HhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 578998888762 356788889998888875
No 148
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=21.57 E-value=1.3e+02 Score=17.34 Aligned_cols=39 Identities=21% Similarity=0.154 Sum_probs=26.9
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
++||+|..+.+. +.-+|...+++.++.++.. ++..+.++
T Consensus 29 ~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 76 (116)
T 2fy1_A 29 GKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 (116)
T ss_dssp HTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSS
T ss_pred HhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 578988877763 3457888899999999863 33344443
No 149
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=21.25 E-value=1.2e+02 Score=16.83 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=22.8
Q ss_pred cccCCeeEEeeC--------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG--------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~--------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 37 ~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 37 QPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp TTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred HhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 578988887764 245677889999988885
No 150
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.24 E-value=1.1e+02 Score=16.74 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=22.3
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+.. .-+|...+++.++.++.
T Consensus 34 ~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 72 (102)
T 1x5s_A 34 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 72 (102)
T ss_dssp HHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHH
T ss_pred HhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 4688887777643 35677789999988884
No 151
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.99 E-value=1.3e+02 Score=17.71 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=23.1
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||.|..+.+. +.-+|-..+.+.++.++.
T Consensus 53 ~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 53 LPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp TTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred HhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 578988887764 456788888888888875
No 152
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.63 E-value=1.3e+02 Score=17.07 Aligned_cols=30 Identities=33% Similarity=0.517 Sum_probs=24.1
Q ss_pred cccCCeeEEeeC---CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+.+.++.++.
T Consensus 37 ~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 37 EKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp TTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 679999888864 457888889999888875
No 153
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=20.31 E-value=1.1e+02 Score=19.25 Aligned_cols=32 Identities=13% Similarity=0.244 Sum_probs=23.8
Q ss_pred cccCCeeEEeeCC---------eeEEEecCHHHHHHHHHhc
Q 038677 3 DKYGPIFTIKMGI---------NRALVVSNWEMAKECLTTH 34 (186)
Q Consensus 3 ~~yG~i~~~~~~~---------~~~i~v~~~~~~~~v~~~~ 34 (186)
.+||+|..+.+.. .-+|-..+++.+..++...
T Consensus 126 ~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~~ 166 (196)
T 1l3k_A 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166 (196)
T ss_dssp TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCS
T ss_pred hcCCCeEEEEEeecCCCCCccceEEEEECCHHHHHHHHHhC
Confidence 5789888776532 2577888999999998643
No 154
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.21 E-value=1.2e+02 Score=16.66 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=22.5
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|...+++.++.++.
T Consensus 30 ~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 68 (104)
T 1p1t_A 30 SEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68 (104)
T ss_dssp HTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH
T ss_pred HhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 578988777653 235677889999999885
No 155
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=20.10 E-value=1.2e+02 Score=16.48 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=23.4
Q ss_pred cccCCeeEEeeC---------CeeEEEecCHHHHHHHHH
Q 038677 3 DKYGPIFTIKMG---------INRALVVSNWEMAKECLT 32 (186)
Q Consensus 3 ~~yG~i~~~~~~---------~~~~i~v~~~~~~~~v~~ 32 (186)
.+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 24 ~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 24 SNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp HTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred HhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 578998888863 345788889999998885
No 156
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=20.09 E-value=1.4e+02 Score=17.13 Aligned_cols=39 Identities=10% Similarity=0.027 Sum_probs=27.4
Q ss_pred cccCCeeEEeeC--CeeEEEecCHHHHHHHHHh-ccccccCC
Q 038677 3 DKYGPIFTIKMG--INRALVVSNWEMAKECLTT-HDKVFASR 41 (186)
Q Consensus 3 ~~yG~i~~~~~~--~~~~i~v~~~~~~~~v~~~-~~~~~~~r 41 (186)
++||+|..+.+. +.-+|...+++.++.++.. +...+.++
T Consensus 38 ~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 79 (115)
T 3beg_B 38 REAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 79 (115)
T ss_dssp GGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCT
T ss_pred HhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 578998888764 5677888899998888863 33334443
Done!