BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038679
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73300|RL36_SYNY3 50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKK+C C++++RRG + VICSANPKHKQRQG
Sbjct: 1 MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38
>sp|B2G8V5|RL36_LACRJ 50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM
1112) GN=rpmJ PE=3 SV=1
Length = 39
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVKK+C+ CKIVKR G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
>sp|A5VLI2|RL36_LACRD 50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM
20016) GN=rpmJ PE=3 SV=1
Length = 39
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVKK+C+ CKIVKR G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
>sp|B3WAJ5|RL36_LACCB 50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23)
GN=rpmJ PE=3 SV=1
Length = 38
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVKK+C+ CK+V+R+G + +ICSANPKHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
>sp|Q035A6|RL36_LACC3 50S ribosomal protein L36 OS=Lactobacillus casei (strain ATCC
334) GN=rpmJ PE=3 SV=1
Length = 38
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVKK+C+ CK+V+R+G + +ICSANPKHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
>sp|Q74L67|RL36_LACJO 50S ribosomal protein L36 OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C+ CKI+KR+G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKIIKRQGRVMVICSANPKHKQRQG 38
>sp|Q03PY0|RL36_LACBA 50S ribosomal protein L36 OS=Lactobacillus brevis (strain ATCC
367 / JCM 1170) GN=rpmJ PE=3 SV=1
Length = 39
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C+ CK++KR+G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRKGRVMVICSANPKHKQRQG 38
>sp|B4F1K5|RL36_PROMH 50S ribosomal protein L36 OS=Proteus mirabilis (strain HI4320)
GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKK+C+ CKIV+R GH+ VICS +PKHKQRQG
Sbjct: 1 MKVRASVKKMCRNCKIVRRHGHVRVICSVDPKHKQRQG 38
>sp|A4WFA7|RL361_ENT38 50S ribosomal protein L36 1 OS=Enterobacter sp. (strain 638)
GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKREGVIRVICSAEPKHKQRQG 38
>sp|Q03ED9|RL36_PEDPA 50S ribosomal protein L36 OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=rpmJ PE=3 SV=1
Length = 39
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C+ CKI++R+G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKTMCEHCKIIRRKGRVMVICSANPKHKQRQG 38
>sp|Q046A3|RL36_LACGA 50S ribosomal protein L36 OS=Lactobacillus gasseri (strain ATCC
33323 / DSM 20243) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C+ CKI+KR G + VICSANPKHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKIIKRHGRVMVICSANPKHKQRQG 38
>sp|Q3YWW0|RL36_SHISS 50S ribosomal protein L36 OS=Shigella sonnei (strain Ss046)
GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|P0A7R0|RL36_SHIFL 50S ribosomal protein L36 OS=Shigella flexneri GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q0T003|RL36_SHIF8 50S ribosomal protein L36 OS=Shigella flexneri serotype 5b
(strain 8401) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q32B52|RL36_SHIDS 50S ribosomal protein L36 OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q31VX7|RL36_SHIBS 50S ribosomal protein L36 OS=Shigella boydii serotype 4 (strain
Sb227) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|P0A7Q8|RL36_SALTY 50S ribosomal protein L36 OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|P0A7Q9|RL36_SALTI 50S ribosomal protein L36 OS=Salmonella typhi GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|P0A7Q6|RL36_ECOLI 50S ribosomal protein L36 OS=Escherichia coli (strain K12)
GN=rpmJ PE=1 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|C4ZUF4|RL36_ECOBW 50S ribosomal protein L36 OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|P0A7Q7|RL36_ECO57 50S ribosomal protein L36 OS=Escherichia coli O157:H7 GN=rpmJ
PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q5PK05|RL361_SALPA 50S ribosomal protein L36 1 OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q57J53|RL361_SALCH 50S ribosomal protein L36 1 OS=Salmonella choleraesuis (strain
SC-B67) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q1R632|RL361_ECOUT 50S ribosomal protein L36 1 OS=Escherichia coli (strain UTI89 /
UPEC) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|B1LHB3|RL361_ECOSM 50S ribosomal protein L36 1 OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|B1IQ00|RL361_ECOLC 50S ribosomal protein L36 1 OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|Q0TCG2|RL361_ECOL5 50S ribosomal protein L36 1 OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|A8A5A4|RL361_ECOHS 50S ribosomal protein L36 1 OS=Escherichia coli O9:H4 (strain HS)
GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|B1X6F1|RL361_ECODH 50S ribosomal protein L36 1 OS=Escherichia coli (strain K12 /
DH10B) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|A7ZSI8|RL361_ECO24 50S ribosomal protein L36 1 OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|A7MPF5|RL361_CROS8 50S ribosomal protein L36 1 OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G I VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>sp|A9BFZ4|RL36_PETMO 50S ribosomal protein L36 OS=Petrotoga mobilis (strain DSM 10674
/ SJ95) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKK C+ CKIVKR G ++V+CS NPKHKQRQG
Sbjct: 1 MKVRASVKKRCEHCKIVKRGGKVWVVCSKNPKHKQRQG 38
>sp|Q9MUU8|RK36_MESVI 50S ribosomal protein L36, chloroplastic OS=Mesostigma viride
GN=rpl36 PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SV+K+C+ C+++KRRG + VICS NPKHKQRQG
Sbjct: 1 MKVRASVRKICENCRLIKRRGTVMVICSNNPKHKQRQG 38
>sp|B2K516|RL362_YERPB 50S ribosomal protein L36 2 OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=rpmJ2 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|A1JS06|RL362_YERE8 50S ribosomal protein L36 2 OS=Yersinia enterocolitica serotype
O:8 / biotype 1B (strain 8081) GN=rpmJ2 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|Q2NQP3|RL362_SODGM 50S ribosomal protein L36 2 OS=Sodalis glossinidius (strain
morsitans) GN=rpmJ2 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|B1JIY2|RL361_YERPY 50S ribosomal protein L36 1 OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|Q664U2|RL361_YERPS 50S ribosomal protein L36 1 OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|Q8ZJ91|RL361_YERPE 50S ribosomal protein L36 1 OS=Yersinia pestis GN=rpmJ1 PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|Q6CZZ1|RL361_ERWCT 50S ribosomal protein L36 1 OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=rpmJ1
PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR+SVKKLC+ CKIVKR G + VICSA PKHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG 38
>sp|Q38UT4|RL36_LACSS 50S ribosomal protein L36 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C+ CK++KR+G + +IC+ANPKHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRKGRVMIICAANPKHKQRQG 38
>sp|C1CPB1|RL36_STRZT 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CIC0|RL36_STRZP 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
P1031) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CC29|RL36_STRZJ 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
JJA) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|A3CK87|RL36_STRSV 50S ribosomal protein L36 OS=Streptococcus sanguinis (strain
SK36) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A496|RL36_STRR6 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A495|RL36_STRPN 50S ribosomal protein L36 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|B1I8M1|RL36_STRPI 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CAN5|RL36_STRP7 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
70585) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|A8AZK2|RL36_STRGC 50S ribosomal protein L36 OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpmJ PE=3
SV=1
Length = 38
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKLCQFCKIVKRRGHIFVICSANPKHKQRQG 38
MKVR SVK +C++CK+++R G + VIC ANPKHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,087,847
Number of Sequences: 539616
Number of extensions: 1269189
Number of successful extensions: 3635
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2359
Number of HSP's gapped (non-prelim): 879
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)