BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038681
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 20/294 (6%)
Query: 44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRS-ISLMKYNGNRNQHALEWCINHIV 102
FS EL++A++N+ +NI+ F K+YKG + +++ + R Q +
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 103 YASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM 151
S H+++++L +V+ + G++A + E L R ++A+
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIAL 146
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
A +AYLH I++RD+K NIL +E+ +A + DF L+ + + H+ +V G
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRG 205
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
T G IAPE +T +E+ DV+G+G L EL+T Q D +R +++V L
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL----ARLANDDDVMLLDWVK 261
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
KE ++ D K+++++ Q+ L C SP +RP M +V + L
Sbjct: 262 GLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 20/294 (6%)
Query: 44 FSAEELRIATNNYDEQNIVLEDPFRKLYKG-FWQKRSISLMKYNGNRNQHALEWCINHIV 102
FS EL++A++N+ +NI+ F K+YKG +++ + R Q +
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 103 YASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM 151
S H+++++L +V+ + G++A + E L R ++A+
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIAL 138
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
A +AYLH I++RD+K NIL +E+ +A + DF L+ + + H+ +V G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRG 197
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
G IAPE +T +E+ DV+G+G L EL+T Q D +R +++V L
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL----ARLANDDDVMLLDWVK 253
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
KE ++ D K+++++ Q+ L C SP +RP M +V + L
Sbjct: 254 GLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 28/306 (9%)
Query: 38 YNPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWC 97
+ YR+ +L ATNN+D + ++ F K+YKG + + +K + +E
Sbjct: 24 FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 98 INHIVYASRMSHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDR 146
I S H H++ LI +++ ++ G L + + + ++S R
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQR 141
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIE 205
L++ + A + YLH +R I++RD+K NIL +E K+ DF +S + G+TH+
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 206 LDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQE-VSDHVSFESRFHYEENV 263
V GT G+I PE F + E+ DVY FG LFE+L A+ + + E E V
Sbjct: 199 -XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 264 KRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
+ S N + +++VD + + + + L+ F ++C+ S EDRP+M DV +
Sbjct: 258 E--SHNNGQLEQIVDPNLADKI------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 324 LRQMYR 329
L R
Sbjct: 310 LEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 28/306 (9%)
Query: 38 YNPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWC 97
+ YR+ +L ATNN+D + ++ F K+YKG + + +K + +E
Sbjct: 24 FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 98 INHIVYASRMSHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDR 146
I S H H++ LI +++ ++ G L + + + ++S R
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQR 141
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIE 205
L++ + A + YLH +R I++RD+K NIL +E K+ DF +S + +TH+
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 206 LDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQE-VSDHVSFESRFHYEENV 263
V GT G+I PE F + E+ DVY FG LFE+L A+ + + E E V
Sbjct: 199 X-VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 264 KRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
+ S N + +++VD + + + + L+ F ++C+ S EDRP+M DV +
Sbjct: 258 E--SHNNGQLEQIVDPNLADKI------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 324 LRQMYR 329
L R
Sbjct: 310 LEYALR 315
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 44 FSAEELRIATNNYDEQNIVL------EDPFRKLYKGFWQKRSISLMKYNGNRN---QHAL 94
FS EL+ TNN+DE+ I + E F +YKG+ ++++ K + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 95 EWCINHIVYASRMSHKHIIKLIVFES-----------VQIGTLADRIHHHCEQHFEALSL 143
+ I ++ H+++++L+ F S G+L DR+ C LS
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS--CLDGTPPLSW 123
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
R K+A A+ + +LH ++RD+K NIL +E AK+ DF L+ +
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 204 IELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSD 249
+ +VGTT + APE I + D+Y FG L E++T D
Sbjct: 181 VXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 44 FSAEELRIATNNYDEQNIVL------EDPFRKLYKGFWQKRSISLMKYNGNRN---QHAL 94
FS EL+ TNN+DE+ I + E F +YKG+ ++++ K + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 95 EWCINHIVYASRMSHKHIIKLIVFES-----------VQIGTLADRIHHHCEQHFEALSL 143
+ I ++ H+++++L+ F S + G+L DR+ C LS
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS--CLDGTPPLSW 132
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
R K+A A+ + +LH ++RD+K NIL +E AK+ DF L+ +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 204 IELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSD 249
+ +VGTT ++APE I + D+Y FG L E++T D
Sbjct: 190 VMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 44 FSAEELRIATNNYDEQNIVL------EDPFRKLYKGFWQKRSISLMKYNGNRN---QHAL 94
FS EL+ TNN+DE+ I + E F +YKG+ ++++ K + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 95 EWCINHIVYASRMSHKHIIKLIVFES-----------VQIGTLADRIHHHCEQHFEALSL 143
+ I ++ H+++++L+ F S + G+L DR+ C LS
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS--CLDGTPPLSW 126
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
R K+A A+ + +LH ++RD+K NIL +E AK+ DF L+ +
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 204 IELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSD 249
+ +VGTT ++APE I + D+Y FG L E++T D
Sbjct: 184 VMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 44 FSAEELRIATNNYDEQNIVL------EDPFRKLYKGFWQKRSISLMKYNGNRN---QHAL 94
FS EL+ TNN+DE+ I + E F +YKG+ ++++ K + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 95 EWCINHIVYASRMSHKHIIKLIVFES-----------VQIGTLADRIHHHCEQHFEALSL 143
+ I ++ H+++++L+ F S + G+L DR+ C LS
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS--CLDGTPPLSW 132
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
R K+A A+ + +LH ++RD+K NIL +E AK+ DF L+ +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 204 IELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSD 249
+ +VGTT ++APE I + D+Y FG L E++T D
Sbjct: 190 VMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L +H + E L RL +A D+A + YLH + PIV+R++K
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKS 167
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +++ K+ DF LS T + S GT ++APE NE+ DVY F
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 235 GAFLFELLTAQE 246
G L+EL T Q+
Sbjct: 226 GVILWELATLQQ 237
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 44/283 (15%)
Query: 59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL--- 115
+ +V F + K W+ + +++ + + A I + SR++H +I+KL
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGA 69
Query: 116 ------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
+V E + G+L + +H + + + + + VAYLH + ++
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 170 YRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINE 227
+RD+KP N+L K+ DF + I +TH+ + G+ ++APE F + +E
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYSE 182
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFES-RFHYEENVKRLSGQNCRFKEMVDSIIIEDKS 286
+CDV+ +G L+E++T ++ D + + R + + N ++ ++
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-------AVHNGTRPPLIKNLP----- 230
Query: 287 CTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ + L +C P RP+M ++ K + + R
Sbjct: 231 ----------KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 44/283 (15%)
Query: 59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL--- 115
+ +V F + K W+ + +++ + + A I + SR++H +I+KL
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGA 70
Query: 116 ------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
+V E + G+L + +H + + + + + VAYLH + ++
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 170 YRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINE 227
+RD+KP N+L K+ DF + I +TH+ + G+ ++APE F + +E
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYSE 183
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFES-RFHYEENVKRLSGQNCRFKEMVDSIIIEDKS 286
+CDV+ +G L+E++T ++ D + + R + + N ++ ++
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-------AVHNGTRPPLIKNLP----- 231
Query: 287 CTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ + L +C P RP+M ++ K + + R
Sbjct: 232 ----------KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L +H + E L RL +A D+A + YLH + PIV+RD+K
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKS 167
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +++ K+ DF LS + GT ++APE NE+ DVY F
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 235 GAFLFELLTAQE 246
G L+EL T Q+
Sbjct: 226 GVILWELATLQQ 237
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 96 WCINHIVYA-SRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLK------ 148
W + VY+ M H++I++ I E + GT D E SL+D LK
Sbjct: 63 WQNEYEVYSLPGMKHENILQFIGAE--KRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW 120
Query: 149 -----VAMDIAHAVAYLHV-------GFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS 196
+A +A +AYLH G I +RD+K N+L A + DF L+L
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 197 IPDGETHIELDSVVGTTGFIAPENFTTLINEQ------CDVYGFGAFLFELLTAQEVSDH 250
G++ + VGT ++APE IN Q D+Y G L+EL + +D
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 251 VSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQL---TLQCM 307
E +EE + GQ+ ++M + ++ + K Q+ L +C
Sbjct: 241 PVDEYMLPFEEEI----GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECW 296
Query: 308 DFSPEDRPTMVDVAKQLRQMYR 329
D E R + V +++ QM R
Sbjct: 297 DHDAEARLSAGCVGERITQMQR 318
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 86 NGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHC 134
N +R+Q +E I + H +IIK+ IV E+ + G L +RI
Sbjct: 56 NKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS-A 114
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFDF 191
+ +ALS ++ + +A+AY H S+ +V++D+KP NILF + S K+ DF
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDF 171
Query: 192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
L+ E + GT ++APE F + +CD++ G ++ LLT
Sbjct: 172 GLAELFKSDEHST---NAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 29/155 (18%)
Query: 108 SHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
H HII LI VF+ ++ G L D + ALS + + + A
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEA 212
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
V++LH + IV+RD+KP NIL ++ +L DF S + GE +L + GT G++
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYL 266
Query: 217 APENFTTLINE-------QCDVYGFGAFLFELLTA 244
APE ++E + D++ G LF LL
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 116/236 (49%), Gaps = 21/236 (8%)
Query: 104 ASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRL--------KVAMD-IA 154
A+ ++H I+ V+++ + T A + + ++ + ++L D + K A++ IA
Sbjct: 66 AAALNHPAIVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIELDSVVGTT 213
A L+ I++RD+KP NI+ + + K+ DF ++ +I D G + + +V+GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 214 GFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ-----EVSDHVSFESRFHYEENVKRLS 267
+++PE ++ + DVY G L+E+LT + + D V+++ H E+ S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ---HVREDPIPPS 240
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
++ +D+++++ + + Q + ++ + P + P ++ A++
Sbjct: 241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 83 MKYNGNRNQHALEWCINH--IVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEA 140
M+ N + AL+ C H IV + H + +V E + G L +RI ++HF
Sbjct: 48 MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK--KKHF-- 103
Query: 141 LSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLS-L 195
S T+ + + AV+++H VG +V+RD+KP N+LF +++D K+ DF + L
Sbjct: 104 -SETEASYIMRKLVSAVSHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
Query: 196 SIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFE 254
PD + L + T + APE +E CD++ G L+ +L+ Q V F+
Sbjct: 159 KPPDNQP---LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ-----VPFQ 210
Query: 255 S 255
S
Sbjct: 211 S 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 107 MSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
+ H +I+KL +V E + G L D I H + + D + +
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIKQVLS 147
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF-NEQSDA--KLFDFSLSLSIPDGETHIELDSVVGT 212
V YLH IV+RD+KP N+L +++ DA K+ DF LS E ++ +GT
Sbjct: 148 GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGT 201
Query: 213 TGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
+IAPE +E+CDV+ G LF LL
Sbjct: 202 AYYIAPEVLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 104 ASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRL--------KVAMD-IA 154
A+ ++H I+ V+++ + T A + + ++ + ++L D + K A++ IA
Sbjct: 66 AAALNHPAIVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIELDSVVGTT 213
A L+ I++RD+KP NIL + + K+ DF ++ +I D G + + +V+GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 214 GFIAPENF-TTLINEQCDVYGFGAFLFELLTAQE--VSDHVSFESRFHYEENVKRLSGQN 270
+++PE ++ + DVY G L+E+LT + D + H E+ S ++
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
+D+++++ + + Q + ++ + P + P ++ A++
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 104 ASRMSHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFE-ALSLTDRLKVAM 151
+S++SH++I+ +I V E ++ TL++ I H + A++ T+++ +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHI-ELDSVV 210
AH + IV+RD+KP NIL + K+FDF ++ ++ ET + + + V+
Sbjct: 125 KHAHDMR---------IVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVL 173
Query: 211 GTTGFIAPENFTTLINEQC-DVYGFGAFLFELLTAQ 245
GT + +PE ++C D+Y G L+E+L +
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFESV-QIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 37 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 95
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE L D +A A + YLH ++ I++RD+K
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLID---IARQTARGMDYLH---AKSIIHRDLKSN 149
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E + K+ DF L+ + + + G+ ++APE + + Q DVY
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 210 AFGIVLYELMTGQ 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 104 ASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRL--------KVAMD-IA 154
A+ ++H I+ V+++ + T A + + ++ + ++L D + K A++ IA
Sbjct: 66 AAALNHPAIVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIELDSVVGTT 213
A L+ I++RD+KP NI+ + + K+ DF ++ +I D G + + +V+GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 214 GFIAPENF-TTLINEQCDVYGFGAFLFELLTAQE--VSDHVSFESRFHYEENVKRLSGQN 270
+++PE ++ + DVY G L+E+LT + D + H E+ S ++
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
+D+++++ + + Q + ++ + P + P ++ A++
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 104 ASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRL--------KVAMD-IA 154
A+ ++H I+ V+++ + T A + + ++ + ++L D + K A++ IA
Sbjct: 66 AAALNHPAIVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIELDSVVGTT 213
A L+ I++RD+KP NI+ + + K+ DF ++ +I D G + + +V+GT
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 214 GFIAPENF-TTLINEQCDVYGFGAFLFELLTAQE--VSDHVSFESRFHYEENVKRLSGQN 270
+++PE ++ + DVY G L+E+LT + D + H E+ S ++
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ 323
+D+++++ + + Q + ++ + P + P ++ A++
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAER 296
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 104 ASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRL--------KVAMD-IA 154
A+ ++H I+ V+++ + T A + + ++ + ++L D + K A++ IA
Sbjct: 83 AAALNHPAIVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 140
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIELDSVVGTT 213
A L+ I++RD+KP NI+ + + K+ DF ++ +I D G + + +V+GT
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 214 GFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
+++PE ++ + DVY G L+E+LT +
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDR 146
+N AL VYA+ + L IV E V TL D +H +T +
Sbjct: 64 QNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-------PMTPK 116
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-GETHIE 205
+ + IA A L+ I++RD+KP NI+ + + K+ DF ++ +I D G + +
Sbjct: 117 RAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 206 LDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQE--VSDHVSFESRFHYEEN 262
+V+GT +++PE ++ + DVY G L+E+LT + D + H E+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK 322
S ++ +D+++++ + + Q + ++ + P + P ++ A+
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAE 295
Query: 323 Q 323
+
Sbjct: 296 R 296
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 132 HHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDF 191
H E FE L D +A A + YLH ++ I++RD+K NI +E + K+ DF
Sbjct: 111 HASETKFEMKKLID---IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 192 SLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVYGFGAFLFELLTAQ 245
L+ + + + G+ ++APE + + Q DVY FG L+EL+T Q
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A ++ A+ YLH S+ I+YRD+KP NIL ++ K+ DF + +PD +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL----- 163
Query: 210 VGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTA 244
GT +IAPE +T N+ D + FG ++E+L
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 132 HHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDF 191
H E FE L D +A A + YLH ++ I++RD+K NI +E + K+ DF
Sbjct: 99 HASETKFEMKKLID---IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDF 152
Query: 192 SLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVYGFGAFLFELLTAQ 245
L+ + + + G+ ++APE + + Q DVY FG L+EL+T Q
Sbjct: 153 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 142 SLTDRLK-----------VAMDIAHAVAYLHV--------GFSRPIVYRDMKPTNILFNE 182
SLTD LK VA ++ ++YLH G I +RD K N+L
Sbjct: 99 SLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKS 158
Query: 183 QSDAKLFDFSLSLSI----PDGETHIELDSVVGTTGFIAPENFTTLINEQ------CDVY 232
A L DF L++ P G+TH + VGT ++APE IN Q D+Y
Sbjct: 159 DLTAVLADFGLAVRFEPGKPPGDTHGQ----VGTRRYMAPEVLEGAINFQRDAFLRIDMY 214
Query: 233 GFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGK 292
G L+EL++ + +D E +EE + GQ+ +E+ + ++ + T
Sbjct: 215 AMGLVLWELVSRCKAADGPVDEYMLPFEEEI----GQHPSLEELQEVVVHKKMRPTIKDH 270
Query: 293 EQQLQAFKQLTL---QCMDFSPEDRPTMVDVAKQLRQMYRS 330
+ QL + +C D E R + V +++ + RS
Sbjct: 271 WLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRS 311
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 107
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 161
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 162 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 222 AFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 41 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 99
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 153
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 213
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 214 AFGIVLYELMTGQ 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 115
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P D++
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLC 168
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 222
Query: 270 NCRFKEMV 277
F + V
Sbjct: 223 EFTFPDFV 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFESV-QIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 133
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 233 GFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGK 292
FG L+EL+T Q +++ + + LS + + +C
Sbjct: 194 AFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS----------NCP---- 239
Query: 293 EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
+A K+L +C+ ++RP + + + RS
Sbjct: 240 ----KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE 227
IVYRD+KP NIL ++ ++ D L++ +P+G+T + VGT G++APE + NE
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPE---VVKNE 360
Query: 228 Q----CDVYGFGAFLFELLTAQ 245
+ D + G L+E++ Q
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 48 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 106
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 160
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 220
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 221 AFGIVLYELMTGQ 233
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE 227
IVYRD+KP NIL ++ ++ D L++ +P+G+T + VGT G++APE + NE
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPE---VVKNE 360
Query: 228 Q----CDVYGFGAFLFELLTAQ 245
+ D + G L+E++ Q
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 130 IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF 189
+H+H QH S D A +I + ++H +R +VYRD+KP NIL +E ++
Sbjct: 278 LHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRIS 333
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELLTA 244
D L+ + H + VGT G++APE + + D + G LF+LL
Sbjct: 334 DLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 49 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 107
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 161
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 162 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 222 AFGIVLYELMTGQ 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 130 IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF 189
+H+H QH S D A +I + ++H +R +VYRD+KP NIL +E ++
Sbjct: 279 LHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRIS 334
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
D L+ + H + VGT G++APE + + D + G LF+LL
Sbjct: 335 DLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 22/143 (15%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+VFE ++ G++ IH +HF L + V D+A A+ +LH ++ I +RD+KP
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEAS---VVVQDVASALDFLH---NKGIAHRDLKP 139
Query: 176 TNILF---NEQSDAKLFDFSLSLSIP-DGE----THIELDSVVGTTGFIAPENF------ 221
NIL N+ S K+ DF L I +G+ + EL + G+ ++APE
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 222 TTLINEQCDVYGFGAFLFELLTA 244
++ +++CD++ G L+ LL+
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSG 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 79
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 133
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 194 AFGIVLYELMTGQ 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 130 IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF 189
+H+H QH S D A +I + ++H +R +VYRD+KP NIL +E ++
Sbjct: 279 LHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRIS 334
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
D L+ + H + VGT G++APE + + D + G LF+LL
Sbjct: 335 DLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 130 IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF 189
+H+H QH S D A +I + ++H +R +VYRD+KP NIL +E ++
Sbjct: 279 LHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRIS 334
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
D L+ + H + VGT G++APE + + D + G LF+LL
Sbjct: 335 DLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G+ D + F+ ++ + +D YLH S ++RD+K
Sbjct: 98 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLD------YLH---SEKKIHRDIKA 148
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +EQ D KL DF ++ + D T I+ ++ VGT ++APE + + + D++
Sbjct: 149 ANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSL 206
Query: 235 GAFLFELLTAQEV-SDHVSFESRFHYEE-NVKRLSGQNCR-FKEMVDSIIIEDKSCTCTG 291
G EL + SD F + N L G + FKE +D+ + +D S T
Sbjct: 207 GITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTA 266
Query: 292 KE 293
KE
Sbjct: 267 KE 268
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I+KL IV E G L D I + S D ++ +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVF 131
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGETHIELDSVVG 211
+ Y+H IV+RD+KP NIL + D K+ DF LS + + ++ +G
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIG 185
Query: 212 TTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
T +IAPE +E+CDV+ G L+ LL+
Sbjct: 186 TAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 22/143 (15%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+VFE ++ G++ IH +HF L + V D+A A+ +LH ++ I +RD+KP
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEAS---VVVQDVASALDFLH---NKGIAHRDLKP 139
Query: 176 TNILF---NEQSDAKLFDFSLSLSIP-DGE----THIELDSVVGTTGFIAPENF------ 221
NIL N+ S K+ DF L I +G+ + EL + G+ ++APE
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 222 TTLINEQCDVYGFGAFLFELLTA 244
++ +++CD++ G L+ LL+
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSG 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I+KL IV E G L D I + S D ++ +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVF 131
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGETHIELDSVVG 211
+ Y+H IV+RD+KP NIL + D K+ DF LS + + ++ +G
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIG 185
Query: 212 TTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
T +IAPE +E+CDV+ G L+ LL+
Sbjct: 186 TAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 140
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P D +
Sbjct: 141 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLC 193
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEANT-YQETYKRISRV 247
Query: 270 NCRFKEMV 277
F + V
Sbjct: 248 EFTFPDFV 255
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 21 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 79
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 133
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 233 GFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGK 292
FG L+EL+T Q +++ + + LS + + +C
Sbjct: 194 AFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS----------NCP---- 239
Query: 293 EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
+A K+L +C+ ++RP + + + RS
Sbjct: 240 ----KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 99 NHIVYASRMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEAL------SLTDRLKVAM 151
N I + H +IIKL VFE + L + E FE + D +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-FEQIINRHKFDECDAANIMK 153
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGETHIELDS 208
I + YLH IV+RD+KP NIL ++ + K+ DF LS +L
Sbjct: 154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRD 207
Query: 209 VVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA---------QEVSDHVSFESRFHY 259
+GT +IAPE NE+CDV+ G ++ LL Q++ V + ++++
Sbjct: 208 RLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE-KGKYYF 266
Query: 260 EEN-VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
+ N K +S + KE++ ++ D + CT +E
Sbjct: 267 DFNDWKNISDEA---KELIKLMLTYDYNKRCTAEE 298
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 84
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 138
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 199 AFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 26 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 84
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 138
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 199 AFGIVLYELMTGQ 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
R+SH +IIKL +V E V G L DRI + ++ D +K I
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE--KGYYSERDAADAVK---QIL 158
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILF-NEQSDA--KLFDFSLSLSIPDGETHIELDSVVG 211
AVAYLH IV+RD+KP N+L+ DA K+ DF LS + E + + +V G
Sbjct: 159 EAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCG 212
Query: 212 TTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQE 246
T G+ APE + D++ G + LL E
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 67 FRKLYKGFWQKR-SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFES-VQIG 124
F +YKG W ++ ++ Q L+ N + + H +I+ + + + Q+
Sbjct: 23 FGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLA 81
Query: 125 TL-----ADRIHHH---CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
+ ++HH E FE + L D +A A + YLH ++ I++RD+K
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLH---AKSIIHRDLKSN 135
Query: 177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----TTLINEQCDVY 232
NI +E K+ DF L+ + + + G+ ++APE + Q DVY
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 195
Query: 233 GFGAFLFELLTAQ 245
FG L+EL+T Q
Sbjct: 196 AFGIVLYELMTGQ 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I+KL IV E G L D I + S D ++ +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVF 131
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGETHIELDSVVG 211
+ Y+H IV+RD+KP NIL + D K+ DF LS + + ++ +G
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIG 185
Query: 212 TTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
T +IAPE +E+CDV+ G L+ LL+
Sbjct: 186 TAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P D +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 25/202 (12%)
Query: 67 FRKLYKGFWQKR-SISLMK--------YNGNRNQHALEWCINHI---VYASRMSHKHIIK 114
F +YKG W ++ ++K + RN+ A+ H+ ++ M+ ++
Sbjct: 49 FGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLA- 107
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
IV + + +L +H E F+ L D +A A + YLH ++ I++RDMK
Sbjct: 108 -IVTQWCEGSSLYKHLHVQ-ETKFQMFQLID---IARQTAQGMDYLH---AKNIIHRDMK 159
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE----QCD 230
NI +E K+ DF L+ +++ G+ ++APE N Q D
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 231 VYGFGAFLFELLTAQEVSDHVS 252
VY +G L+EL+T + H++
Sbjct: 220 VYSYGIVLYELMTGELPYSHIN 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 107 MSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
+ H+HI +L +V E G L D I + LS + V I
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVS 119
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
AVAY+H S+ +RD+KP N+LF+E KL DF L + P G L + G+ +
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCCGSLAY 175
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTA 244
APE + + + DV+ G L+ L+
Sbjct: 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 106 RMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEALSL-----TDRLKVAMDIAHAVAY 159
++ H +I+KL FE L ++ E E +S D ++ + + Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+H IV+RD+KP N+L +S + ++ DF LS E ++ +GT +I
Sbjct: 148 MH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 201
Query: 217 APENFTTLINEQCDVYGFGAFLFELLTA 244
APE +E+CDV+ G L+ LL+
Sbjct: 202 APEVLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ +LH S I+YRD+KP NIL +E+ KL DF LS D E + S G
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCG 189
Query: 212 TTGFIAPENFTTLINEQ-CDVYGFGAFLFELLTA 244
T ++APE + Q D + FG +FE+LT
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ +LH S I+YRD+KP NIL +E+ KL DF LS D E + S G
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCG 188
Query: 212 TTGFIAPENFTTLINEQ-CDVYGFGAFLFELLTA 244
T ++APE + Q D + FG +FE+LT
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L + + ++ A T + +A+D H++ ++H RD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-----LINEQCD 230
N+L ++ KL DF + + + E + D+ VGT +I+PE + +CD
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 231 VYGFGAFLFELLTAQ 245
+ G FL+E+L
Sbjct: 261 WWSVGVFLYEMLVGD 275
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L D + ++H L + L + I + YL SR V+RD+
Sbjct: 91 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 143
Query: 176 TNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYG 233
NIL ++ K+ DF L+ +P D + ++ + + APE+ + + + Q DV+
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 234 FGAFLFELLTA--QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG 291
FG L+EL T + S F E +V L CR E+++ C
Sbjct: 204 FGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL----CRLLELLEEGQRLPAPPACPA 259
Query: 292 KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY---RSC 331
+ +L C SP+DRP+ + QL ++ R C
Sbjct: 260 EVHELMKL------CWAPSPQDRPSFSALGPQLDMLWSGSRGC 296
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 52/245 (21%)
Query: 107 MSHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
+ H +++K I + E ++ GTL I Q+ + R+ A DIA
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY----PWSQRVSFAKDIAS 119
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE---------- 205
+AYLH S I++RD+ N L E + + DF L+ + D +T E
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 206 --LDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
+VVG ++APE +E+ DV+ FG L E++ + +D + N
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLN 235
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK 322
V+ + C +C +F +T++C D PE RP+ V +
Sbjct: 236 VRGFLDRYC------------PPNCP--------PSFFPITVRCCDLDPEKRPSFVKLEH 275
Query: 323 QLRQM 327
L +
Sbjct: 276 WLETL 280
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L + + ++ A T + +A+D H++ ++H RD+KP
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 196
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-----LINEQCD 230
N+L ++ KL DF + + + E + D+ VGT +I+PE + +CD
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 231 VYGFGAFLFELLTAQ 245
+ G FL+E+L
Sbjct: 256 WWSVGVFLYEMLVGD 270
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 109 HKHIIKL-----------IVFESVQIGTLADRIHHHCE-QHFEALSLTDRLKVAMDIAHA 156
H HIIKL +V E V G L D I H + EA L ++ A+D H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH- 128
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+V+RD+KP N+L + +AK+ DF LS + DGE L + G+ +
Sbjct: 129 --------RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYA 177
Query: 217 APENFTTLI--NEQCDVYGFGAFLFELLTA 244
APE + + + D++ G L+ LL
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L + + ++ A T + +A+D H++ ++H RD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-----LINEQCD 230
N+L ++ KL DF + + + E + D+ VGT +I+PE + +CD
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 231 VYGFGAFLFELLTAQ 245
+ G FL+E+L
Sbjct: 261 WWSVGVFLYEMLVGD 275
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 95 EWCINHIVYASRMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEALSL-----TDRLK 148
E + + ++ H +I+KL FE L ++ E E +S D +
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 153
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DA--KLFDFSLSLSIPDGETHIE 205
+ + + Y+H IV+RD+KP N+L +S DA ++ DF LS E +
Sbjct: 154 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 207
Query: 206 LDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
+ +GT +IAPE +E+CDV+ G L+ LL+
Sbjct: 208 MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 95 EWCINHIVYASRMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEALSL-----TDRLK 148
E + + ++ H +I+KL FE L ++ E E +S D +
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 154
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DA--KLFDFSLSLSIPDGETHIE 205
+ + + Y+H IV+RD+KP N+L +S DA ++ DF LS E +
Sbjct: 155 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 208
Query: 206 LDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
+ +GT +IAPE +E+CDV+ G L+ LL+
Sbjct: 209 MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 31/185 (16%)
Query: 77 KRSISLMKYNG---NRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQ 122
+R+I ++K + N AL ++ + ++ H +I+KL +V E +
Sbjct: 31 ERAIKIIKKSSVTTTSNSGAL---LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 87
Query: 123 IGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE 182
G L D I Q F S D + + YLH IV+RD+KP N+L
Sbjct: 88 GGELFDEII--LRQKF---SEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLES 139
Query: 183 QS-DA--KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLF 239
+S DA K+ DF LS E ++ +GT +IAPE +E+CDV+ G L+
Sbjct: 140 KSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILY 196
Query: 240 ELLTA 244
LL
Sbjct: 197 ILLCG 201
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSRFDEQRTATYI 118
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P D++
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLC 171
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L FE+ Y+E +R+S
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP-----PFEAH-TYQETYRRISRV 225
Query: 270 NCRFKEMV 277
F + V
Sbjct: 226 EFTFPDFV 233
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 95 EWCINHIVYASRMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEALSL-----TDRLK 148
E + + ++ H +I+KL FE L ++ E E +S D +
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DA--KLFDFSLSLSIPDGETHIE 205
+ + + Y+H IV+RD+KP N+L +S DA ++ DF LS E +
Sbjct: 131 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 184
Query: 206 LDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
+ +GT +IAPE +E+CDV+ G L+ LL+
Sbjct: 185 MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 127
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 230
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 231 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ +LH S I+YRD+KP NIL +E+ KL DF LS D E + S G
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCG 188
Query: 212 TTGFIAPENFTTLINEQ-CDVYGFGAFLFELLTA 244
T ++APE + Q D + FG +FE+LT
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 123
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 226
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 227 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 127
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 230
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 231 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 123
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 226
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 227 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 107 MSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
+ H +II+L +V E G L +R+ H +D ++ D+
Sbjct: 80 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-----RVFRESDAARIMKDVLS 134
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
AVAY H + +RD+KP N LF + S KL DF L+ G+ + + VGT
Sbjct: 135 AVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGT 188
Query: 213 TGFIAPENFTTLINEQCDVYGFGAFLFELL 242
+++P+ L +CD + G ++ LL
Sbjct: 189 PYYVSPQVLEGLYGPECDEWSAGVMMYVLL 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 107 MSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
+ H +II+L +V E G L +R+ H +D ++ D+
Sbjct: 63 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-----RVFRESDAARIMKDVLS 117
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
AVAY H + +RD+KP N LF + S KL DF L+ G+ + + VGT
Sbjct: 118 AVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGT 171
Query: 213 TGFIAPENFTTLINEQCDVYGFGAFLFELL 242
+++P+ L +CD + G ++ LL
Sbjct: 172 PYYVSPQVLEGLYGPECDEWSAGVMMYVLL 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 133
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 236
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 237 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 77 KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGT 125
+R+I ++K + ++ + ++ H +I+KL +V E + G
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 107
Query: 126 LADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS- 184
L D I Q F S D + + YLH IV+RD+KP N+L +S
Sbjct: 108 LFDEII--LRQKF---SEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSR 159
Query: 185 DA--KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELL 242
DA K+ DF LS E ++ +GT +IAPE +E+CDV+ G L+ LL
Sbjct: 160 DALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILL 216
Query: 243 TA 244
Sbjct: 217 CG 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 123
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 226
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 227 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L D + ++H L + L + I + YL SR V+RD+
Sbjct: 87 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYG 233
NIL ++ K+ DF L+ +P D + + + + APE+ + + + Q DV+
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 234 FGAFLFELLT--AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG 291
FG L+EL T + S F E +V L CR E+++ C
Sbjct: 200 FGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL----CRLLELLEEGQRLPAPPACPA 255
Query: 292 KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
+ +L C SP+DRP+ + QL ++
Sbjct: 256 EVHELMKL------CWAPSPQDRPSFSALGPQLDMLW 286
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 109 HKHIIKL-----------IVFESVQIGTLADRIHHHCE-QHFEALSLTDRLKVAMDIAHA 156
H HIIKL +V E V G L D I H + EA L ++ A+D H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH- 128
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+V+RD+KP N+L + +AK+ DF LS + DGE L G+ +
Sbjct: 129 --------RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSCGSPNYA 177
Query: 217 APENFTTLI--NEQCDVYGFGAFLFELLTA 244
APE + + + D++ G L+ LL
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 107 MSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ H+++I+L +V E +G+L DR+ H + HF +L+ + A+ +A
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLS---RYAVQVAEG 133
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT-GF 215
+ YL S+ ++RD+ N+L + K+ DF L ++P + H + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 216 IAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE+ T + D + FG L+E+ T + +E L+G K
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT--------------YGQEPWIGLNGSQILHK 236
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV 318
I+ + E Q + +QC PEDRPT V
Sbjct: 237 -------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 131
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 132 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 184
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEANT-YQETYKRISRV 238
Query: 270 NCRFKEMV 277
F + V
Sbjct: 239 EFTFPDFV 246
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 119
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 172
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 226
Query: 270 NCRFKEMV 277
F + V
Sbjct: 227 EFTFPDFV 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 140
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 141 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 193
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEANT-YQETYKRISRV 247
Query: 270 NCRFKEMV 277
F + V
Sbjct: 248 EFTFPDFV 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 30/155 (19%)
Query: 107 MSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
+ H+HI+K +V E V +G+L D + HC + L L A I
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC------VGLAQLLLFAQQI 121
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL----DSV 209
+AYLH ++ ++R + N+L + K+ DF L+ ++P+G + + DS
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLT 243
V + APE DV+ FG L+ELLT
Sbjct: 179 V---FWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +I + YLH S ++RD+K N+L +EQ D KL DF ++ + D T I+ +
Sbjct: 121 ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNX 175
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEV-SDHVSFESRFHYEEN-VKR 265
VGT ++APE + + + D++ G EL + SD F +N
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPT 235
Query: 266 LSGQNCR-FKEMVDSIIIEDKSCTCTGKE 293
L GQ+ + FKE V++ + +D T KE
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKE 264
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 30/155 (19%)
Query: 107 MSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
+ H+HI+K +V E V +G+L D + HC + L L A I
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC------VGLAQLLLFAQQI 120
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL----DSV 209
+AYLH ++ ++R + N+L + K+ DF L+ ++P+G + + DS
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLT 243
V + APE DV+ FG L+ELLT
Sbjct: 178 V---FWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 111
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 112 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 164
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 218
Query: 270 NCRFKEMV 277
F + V
Sbjct: 219 EFTFPDFV 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 113
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 114 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 166
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 220
Query: 270 NCRFKEMV 277
F + V
Sbjct: 221 EFTFPDFV 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 118
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 171
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 225
Query: 270 NCRFKEMV 277
F + V
Sbjct: 226 EFTFPDFV 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 74 FWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHH 133
FW++R I M + + W + ++ + K++ +V E + G L + + ++
Sbjct: 122 FWEERDI--MAFANS------PWVVQ--LFCAFQDDKYL--YMVMEYMPGGDLVNLMSNY 169
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL 193
A T + +A+D H++ +H RD+KP N+L ++ KL DF
Sbjct: 170 DVPEKWAKFYTAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGT 220
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFTT-----LINEQCDVYGFGAFLFELLTA 244
+ + D + D+ VGT +I+PE + +CD + G FLFE+L
Sbjct: 221 CMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 119
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 172
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKP-----PFEANT-YQETYKRISRV 226
Query: 270 NCRFKEMV 277
F + V
Sbjct: 227 EFTFPDFV 234
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 140 ALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD 199
AL++ D + A I+ + YL +V+RD+ NIL E K+ DF LS + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 200 GETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRF 257
+++++ ++A E+ F + Q DV+ FG L+E++T + E F
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM 317
+ + R+ ++ C+ + +L LQC P+ RP
Sbjct: 263 NLLKTGHRM-----------------ERPDNCS------EEMYRLMLQCWKQEPDKRPVF 299
Query: 318 VDVAKQLRQM 327
D++K L +M
Sbjct: 300 ADISKDLEKM 309
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGE-THIELDSV 209
+I+ A+ +LH + I+YRD+KP NI+ N Q KL DF L SI DG TH +
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----TF 181
Query: 210 VGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N D + GA ++++LT
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L D + ++H L + L + I + YL SR V+RD+
Sbjct: 103 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 155
Query: 176 TNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYG 233
NIL ++ K+ DF L+ +P D + ++ + + APE+ + + + Q DV+
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 234 FGAFLFELLTA--QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG 291
FG L+EL T + S F E +V LS R E+++ C
Sbjct: 216 FGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS----RLLELLEEGQRLPAPPACPA 271
Query: 292 KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY---RSC 331
+ +L C SP+DRP+ + QL ++ R C
Sbjct: 272 EVHELMKL------CWAPSPQDRPSFSALGPQLDMLWSGSRGC 308
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A + +LH S I+YRD+KP NIL +E+ KL DF LS D E + S G
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEK--KAYSFCG 192
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
T ++APE ++N Q D + +G +FE+LT
Sbjct: 193 TVEYMAPE----VVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L D + ++H L + L + I + YL SR V+RD+
Sbjct: 90 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 142
Query: 176 TNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYG 233
NIL ++ K+ DF L+ +P D + ++ + + APE+ + + + Q DV+
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 234 FGAFLFELLTA--QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG 291
FG L+EL T + S F E +V LS R E+++ C
Sbjct: 203 FGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALS----RLLELLEEGQRLPAPPACPA 258
Query: 292 KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY---RSC 331
+ +L C SP+DRP+ + QL ++ R C
Sbjct: 259 EVHELMKL------CWAPSPQDRPSFSALGPQLDMLWSGSRGC 295
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 119
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLC 172
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEANT-YQETYKRISRV 226
Query: 270 NCRFKEMV 277
F + V
Sbjct: 227 EFTFPDFV 234
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 115
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLC 168
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 222
Query: 270 NCRFKEMV 277
F + V
Sbjct: 223 EFTFPDFV 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 116
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 117 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLC 169
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 223
Query: 270 NCRFKEMV 277
F + V
Sbjct: 224 EFTFPDFV 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 107 MSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
+ H+HIIK +V E V +G+L D + H ++ L L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQI 126
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT 213
+AYLH S+ ++R++ N+L + K+ DF L+ ++P+G + + +
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 214 GF-IAPENFTTL-INEQCDVYGFGAFLFELLT 243
F APE DV+ FG L+ELLT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + +LH R I+YRD+KP N+L ++ + ++ D L++ + G+T + GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 213 TGFIAPENFTTLINEQ----CDVYGFGAFLFELLTAQ 245
GF+APE L+ E+ D + G L+E++ A+
Sbjct: 353 PGFMAPE---LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 136 QHFEALSLTDRLKVAM---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS 192
+ + LS D + A ++A+A++Y H S+ +++RD+KP N+L + K+ DF
Sbjct: 102 KELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 193 LSLSIPDGETHIELDSVVGTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHV 251
S+ P ++ GT ++ PE + +E+ D++ G +E L +
Sbjct: 159 WSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP----- 209
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMV 277
FE+ Y+E KR+S F + V
Sbjct: 210 PFEAN-TYQETYKRISRVEFTFPDFV 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + +LH R I+YRD+KP N+L ++ + ++ D L++ + G+T + GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 213 TGFIAPENFTTLINEQ----CDVYGFGAFLFELLTAQ 245
GF+APE L+ E+ D + G L+E++ A+
Sbjct: 353 PGFMAPE---LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + +LH R I+YRD+KP N+L ++ + ++ D L++ + G+T + GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 213 TGFIAPENFTTLINEQ----CDVYGFGAFLFELLTAQ 245
GF+APE L+ E+ D + G L+E++ A+
Sbjct: 353 PGFMAPE---LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + +LH R I+YRD+KP N+L ++ + ++ D L++ + G+T + GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 213 TGFIAPENFTTLINEQ----CDVYGFGAFLFELLTAQ 245
GF+APE L+ E+ D + G L+E++ A+
Sbjct: 353 PGFMAPE---LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGE-THIELDSV 209
+I+ A+ +LH + I+YRD+KP NI+ N Q KL DF L SI DG TH
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----XF 181
Query: 210 VGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N D + GA ++++LT
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 114
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 115 TELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALC 167
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y++ KR+S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQDTYKRISRV 221
Query: 270 NCRFKEMV 277
F + V
Sbjct: 222 EFTFPDFV 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 116 IVFESVQIGTLADRIH-HHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
I E + GTL D IH + Q + + ++ I A++Y+H S+ I++RD+K
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRD-----EYWRLFRQILEALSYIH---SQGIIHRDLK 143
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELD------------SVVGTTGFIAPE--N 220
P NI +E + K+ DF L+ ++ ++LD S +GT ++A E +
Sbjct: 144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203
Query: 221 FTTLINEQCDVYGFGAFLFELL 242
T NE+ D+Y G FE++
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 115
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S P ++
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLS 168
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 222
Query: 270 NCRFKEMV 277
F + V
Sbjct: 223 EFTFPDFV 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 140 ALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD 199
AL++ D + A I+ + YL +V+RD+ NIL E K+ DF LS + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 200 GETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRF 257
++ ++ ++A E+ F + Q DV+ FG L+E++T + E F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM 317
+ + R+ ++ C+ + +L LQC P+ RP
Sbjct: 263 NLLKTGHRM-----------------ERPDNCS------EEMYRLMLQCWKQEPDKRPVF 299
Query: 318 VDVAKQLRQM 327
D++K L +M
Sbjct: 300 ADISKDLEKM 309
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE S+ K+ DF L+ D E+ V T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVAT 191
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 140 ALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD 199
AL++ D + A I+ + YL +V+RD+ NIL E K+ DF LS + +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 200 GETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRF 257
++ ++ ++A E+ F + Q DV+ FG L+E++T + E F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM 317
+ + R+ ++ C+ + +L LQC P+ RP
Sbjct: 263 NLLKTGHRM-----------------ERPDNCS------EEMYRLMLQCWKQEPDKRPVF 299
Query: 318 VDVAKQLRQM 327
D++K L +M
Sbjct: 300 ADISKDLEKM 309
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE S+ K+ DF L+ D E+ V T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVAT 187
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 22/143 (15%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+VFE +Q G++ I ++HF + +V D+A A+ +LH ++ I +RD+KP
Sbjct: 88 LVFEKLQGGSILAHIQK--QKHFNEREAS---RVVRDVAAALDFLH---TKGIAHRDLKP 139
Query: 176 TNILFNEQ---SDAKLFDFSL--SLSIPDGETHI---ELDSVVGTTGFIAPE------NF 221
NIL S K+ DF L + + + T I EL + G+ ++APE +
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQ 199
Query: 222 TTLINEQCDVYGFGAFLFELLTA 244
T +++CD++ G L+ +L+
Sbjct: 200 ATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSRFDEQRTATYI 118
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ DF S+ P ++
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLC 171
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L FE+ Y+E +R+S
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP-----PFEAH-TYQETYRRISRV 225
Query: 270 NCRFKEMV 277
F + V
Sbjct: 226 EFTFPDFV 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 116
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ +F S+ P ++
Sbjct: 117 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLC 169
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 223
Query: 270 NCRFKEMV 277
F + V
Sbjct: 224 EFTFPDFV 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 107 MSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
+ H+HIIK +V E V +G+L D + H ++ L L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQI 126
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT 213
+AYLH ++ ++R++ N+L + K+ DF L+ ++P+G + + +
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 214 GF-IAPENFTTL-INEQCDVYGFGAFLFELLT 243
F APE DV+ FG L+ELLT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 105 SRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM-- 151
S + H +I++L ++ E +GT+ + + LS D + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--------RELQKLSKFDEQRTATYI 117
Query: 152 -DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
++A+A++Y H S+ +++RD+KP N+L + K+ +F S+ P ++
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLC 170
Query: 211 GTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
GT ++ PE + +E+ D++ G +E L + FE+ Y+E KR+S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP-----PFEAN-TYQETYKRISRV 224
Query: 270 NCRFKEMV 277
F + V
Sbjct: 225 EFTFPDFV 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
F ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 24 FGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T + APE+ + + DV+ F
Sbjct: 138 RNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 197 GVLLWEIATYG-MSPYPGIDPSQVYE-----LLEKDYRM----------ERPEGCPEK-- 238
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 239 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD----- 207
I A++Y+H S+ I++RD+KP NI +E + K+ DF L+ ++ ++LD
Sbjct: 125 ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 208 -------SVVGTTGFIAPE--NFTTLINEQCDVYGFGAFLFELL 242
S +GT ++A E + T NE+ D+Y G FE++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 30/155 (19%)
Query: 107 MSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
+ H+HIIK +V E V +G+L D + H ++ L L A I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQI 143
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL----DSV 209
+AYLH ++ ++RD+ N+L + K+ DF L+ ++P+G + DS
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLT 243
V + APE DV+ FG L+ELLT
Sbjct: 201 V---FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DA--KLFDFSLSLSI 197
S D ++ + + Y H IV+RD+KP N+L +S DA ++ DF LS
Sbjct: 123 FSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA 244
E + +GT +IAPE +E+CDV+ G L+ LL+
Sbjct: 180 ---EASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 136 QHFEALSLTDRLKVAM---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS 192
+ + LS D + A ++A+A++Y H S+ +++RD+KP N+L + K+ DF
Sbjct: 102 KELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 193 LSLSIPDGETHIELDSVVGTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHV 251
S+ P + GT ++ PE + +E+ D++ G +E L +
Sbjct: 159 WSVHAPSSRR----XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP----- 209
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMV 277
FE+ Y+E KR+S F + V
Sbjct: 210 PFEAN-TYQETYKRISRVEFTFPDFV 234
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 240
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 241 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 240
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 241 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 140
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 141 RNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 200 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 241
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 242 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 145 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 204 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 241
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + +AYL I++RD+KP+NIL N
Sbjct: 92 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVN 149
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT ++APE T + Q D++ G L E
Sbjct: 150 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
Query: 241 LLTAQ 245
L +
Sbjct: 206 LAVGR 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 87
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 142 RNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 201 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 242
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 243 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T + APE+ + + DV+ F
Sbjct: 138 RNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 197 GVLLWEIATYG-MSPYPGIDPSQVYE-----LLEKDYRM----------ERPEGCPEK-- 238
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 239 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE S+ K+ DF L D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Query: 109 HKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
H HIIKL +V E V G L D I C+ L + ++ I V
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI---CKN--GRLDEKESRRLFQQILSGV 129
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIA 217
Y H +V+RD+KP N+L + +AK+ DF LS + DGE L G+ + A
Sbjct: 130 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAA 183
Query: 218 PENFTTLI--NEQCDVYGFGAFLFELLTA 244
PE + + + D++ G L+ LL
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 97 CINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTD 145
CI I +++H ++IK IV E G L+ I H +Q +
Sbjct: 79 CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK-RLIPERT 137
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
K + + A+ ++H SR +++RD+KP N+ KL D L T
Sbjct: 138 VWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 206 LDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEE-NV 263
S+VGT +++PE N + D++ G L+E+ + +S F+ ++ N+
Sbjct: 195 --SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM---------AALQSPFYGDKMNL 243
Query: 264 KRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV---DV 320
L C+ E D + + + +QL C++ PE RP + DV
Sbjct: 244 YSL----CKKIEQCDYPPLPS--------DHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291
Query: 321 AKQL 324
AK++
Sbjct: 292 AKRM 295
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+VF+ ++ G L D + LS + K+ + + LH IV+RD+K
Sbjct: 100 FLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALH---KLNIVHRDLK 151
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE------- 227
P NIL ++ + KL DF S + GE +L SV GT ++APE +N+
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVCGTPSYLAPEIIECSMNDNHPGYGK 208
Query: 228 QCDVYGFGAFLFELLTA 244
+ D++ G ++ LL
Sbjct: 209 EVDMWSTGVIMYTLLAG 225
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 39 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 98
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 152
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 153 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 212 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 253
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 254 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 284
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 236
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYAS-RMSHKHIIKLIVFE------ 119
+ ++++G W S+++ ++ Q W +Y + + H +I+ I +
Sbjct: 21 YGEVWRGLWHGESVAVKIFSSRDEQ---SWFRETEIYNTVLLRHDNILGFIASDMTSRNS 77
Query: 120 SVQIGTLADRIHHHCEQHF---EALSLTDRLKVAMDIAHAVAYLHVGF----SRP-IVYR 171
S Q+ + H F + L L++A+ A +A+LHV +P I +R
Sbjct: 78 STQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHR 137
Query: 172 DMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPENFTTLINEQC 229
D K N+L + D L++ G ++++ + VGT ++APE I C
Sbjct: 138 DFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 230 -------DVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIII 282
D++ FG L+E+ V+ V Y + + F++M + +
Sbjct: 198 FESYKWTDIWAFGLVLWEIARRTIVNGIVE-----DYRPPFYDVVPNDPSFEDMKKVVCV 252
Query: 283 EDKSCTCTGK---EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
+ ++ T + + L Q+ +C +P R T + + K L+++ S
Sbjct: 253 DQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 240
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 241 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD--------AKLFDFSLSLSIPDGE 201
A+ IA + YLH PI++RD+K +NIL ++ + K+ DF L+ E
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----E 165
Query: 202 THIELD-SVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHY 259
H S G ++APE ++ ++ DV+ +G L+ELLT + V F
Sbjct: 166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE-----VPF------ 214
Query: 260 EENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVD 319
+ + G + ++ + + S TC + F +L C + P RP+ +
Sbjct: 215 ----RGIDGLAVAYGVAMNKLALPIPS-TCP------EPFAKLMEDCWNPDPHSRPSFTN 263
Query: 320 VAKQL 324
+ QL
Sbjct: 264 ILDQL 268
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 87
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 142 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 201 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 242
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 243 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 145 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 204 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 245
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 246 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 145 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 204 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 245
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 246 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVAT 192
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 86
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 140
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T + APE+ + + DV+ F
Sbjct: 141 RNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 200 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 241
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 242 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVAT 192
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 236
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVAT 192
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVAT 196
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 30 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 89
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 143
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 144 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 203 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 240
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 87
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 141
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 142 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 201 GVLLWEIATYG-MSPYPGIDLSQVYE-----LLEKDYRM----------ERPEGCPEK-- 242
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 243 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 145 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 204 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 241
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 83
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T + APE+ + + DV+ F
Sbjct: 138 RNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE L ++ R ++ C K
Sbjct: 197 GVLLWEIATYG-MSPYPGIDPSQVYE-----LLEKDYRM----------ERPEGCPEK-- 238
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+L C ++P DRP+ ++ + M++
Sbjct: 239 ----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 196
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXGXVAT 205
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 191
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVAT 190
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 191
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVAT 190
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 105 SRMSHKHIIKL---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
S ++H +I+KL +V E V G L +H + + +L++ +DIA
Sbjct: 78 SNLNHPNIVKLYGLMHNPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF-----NEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
+ Y+ + PIV+RD++ NI N AK+ DFSLS H + ++
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVH-SVSGLL 187
Query: 211 GTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSF 253
G ++APE E+ D Y F L+ +LT + D S+
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 208
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 197
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 197
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 197
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 187
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGXVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 205
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 191
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 195
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 205
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 192
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 187
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 204
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 204
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 190
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 181
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 187
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 190
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 184
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 181
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 182
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 182
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 107 MSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR 166
M H LI+ E ++ G L RI +Q F + + ++ DI A+ +LH S
Sbjct: 75 MHHGKRCLLIIMECMEGGELFSRIQERGDQAF---TEREAAEIMRDIGTAIQFLH---SH 128
Query: 167 PIVYRDMKPTNILF-NEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT 223
I +RD+KP N+L+ +++ DA KL DF + T L + T ++APE
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGP 184
Query: 224 -LINEQCDVYGFGAFLFELLTA 244
++ CD++ G ++ LL
Sbjct: 185 EKYDKSCDMWSLGVIMYILLCG 206
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 183
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 227
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 41/274 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 140 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 199 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 236
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
+ +L C ++P DRP+ ++ + M+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 181
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXGYVAT 208
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVAT 181
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 107 MSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR 166
M H LI+ E ++ G L RI +Q F + + ++ DI A+ +LH S
Sbjct: 94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAF---TEREAAEIMRDIGTAIQFLH---SH 147
Query: 167 PIVYRDMKPTNILF-NEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT 223
I +RD+KP N+L+ +++ DA KL DF + T L + T ++APE
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGP 203
Query: 224 -LINEQCDVYGFGAFLFELLTA 244
++ CD++ G ++ LL
Sbjct: 204 EKYDKSCDMWSLGVIMYILLCG 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 188
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 246 MWSLGVIMYILL 257
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 194
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 252 MWSLGVIMYILL 263
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 42 RIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQ------KRSISLMKYNGNRNQHALE 95
RIF ELR + ++ F ++KG W K + + + + +
Sbjct: 26 RIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 78
Query: 96 WCINHIVYASRMSHKHIIKLI----------VFESVQIGTLADRIHHHCEQHFEALSLTD 145
+H++ + H HI++L+ V + + +G+L D H QH AL
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLD----HVRQHRGALGPQL 134
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L + IA + YL +V+R++ N+L S ++ DF ++ +P + +
Sbjct: 135 LLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 206 LDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
++A E+ Q DV+ +G ++EL+T
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 144
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 202 MWSLGVIMYILL 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 42 RIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQ------KRSISLMKYNGNRNQHALE 95
RIF ELR + ++ F ++KG W K + + + + +
Sbjct: 8 RIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 60
Query: 96 WCINHIVYASRMSHKHIIKLI----------VFESVQIGTLADRIHHHCEQHFEALSLTD 145
+H++ + H HI++L+ V + + +G+L D H QH AL
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLD----HVRQHRGALGPQL 116
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L + IA + YL +V+R++ N+L S ++ DF ++ +P + +
Sbjct: 117 LLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 206 LDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
++A E+ Q DV+ +G ++EL+T
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 108 SHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
H +II+L +VF+ ++ G L D + LS + K+ +
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEV 123
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+ LH IV+RD+KP NIL ++ + KL DF S + GE +L V GT ++
Sbjct: 124 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYL 177
Query: 217 APENFTTLINE-------QCDVYGFGAFLFELLTA 244
APE +N+ + D++ G ++ LL
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 142
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 200 MWSLGVIMYILL 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 108/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 90
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++RD+
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T + APE+ + + DV+ F
Sbjct: 145 RNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 204 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 241
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 143
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 201 MWSLGVIMYILL 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + +S VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T ++ D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 144
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 202 MWSLGVIMYILL 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 150
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 208 MWSLGVIMYILL 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 149
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 207 MWSLGVIMYILL 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 123 IGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE 182
+GT A+++ + + +R+ M +A A ++ +++RD+KP+NIL +E
Sbjct: 106 MGTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE 160
Query: 183 QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL------INEQCDVYGFGA 236
+ KL DF +S + D + D G ++APE + + DV+ G
Sbjct: 161 RGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 237 FLFELLTAQ 245
L EL T Q
Sbjct: 218 SLVELATGQ 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 158
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 216 MWSLGVIMYILL 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 148
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 206 MWSLGVIMYILL 217
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIVFE------ 119
+ ++++G WQ ++++ K +R++ + W +Y + M H++I+ I +
Sbjct: 21 YGEVWRGSWQGENVAV-KIFSSRDEKS--WFRETELYNTVMLRHENILGFIASDMTSRHS 77
Query: 120 SVQIGTLADRIHHHCEQHFEALSLTDR-----LKVAMDIAHAVAYLHVGF----SRP-IV 169
S Q+ + +H ++ L LT L++ + IA +A+LH+ +P I
Sbjct: 78 STQLWLITH--YHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPENFTTLINE 227
+RD+K NIL + + D L++ +++ + VGT ++APE I
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 228 QC-------DVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSI 280
C D++ FG L+E + + VS+ + + + + + V + F++M +
Sbjct: 196 DCFDSYKRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVP----NDPSFEDMRKVV 250
Query: 281 IIEDKSCTCTGK---EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ + + + L + +L +C +P R T + + K L ++
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+VF+ ++ G L D + LS + K+ + + LH IV+RD+K
Sbjct: 100 FLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALH---KLNIVHRDLK 151
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE------- 227
P NIL ++ + KL DF S + GE +L V GT ++APE +N+
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGK 208
Query: 228 QCDVYGFGAFLFELLTA 244
+ D++ G ++ LL
Sbjct: 209 EVDMWSTGVIMYTLLAG 225
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ D+ L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIVFE------ 119
+ ++++G WQ ++++ K +R++ + W +Y + M H++I+ I +
Sbjct: 21 YGEVWRGSWQGENVAV-KIFSSRDEKS--WFRETELYNTVMLRHENILGFIASDMTSRHS 77
Query: 120 SVQIGTLADRIHHHCEQHFEALSLTDR-----LKVAMDIAHAVAYLHVGF----SRP-IV 169
S Q+ + +H ++ L LT L++ + IA +A+LH+ +P I
Sbjct: 78 STQLWLITH--YHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPENFTTLINE 227
+RD+K NIL + + D L++ +++ + VGT ++APE I
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 228 QC-------DVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSI 280
C D++ FG L+E + + VS+ + + + + + V + F++M +
Sbjct: 196 DCFDSYKRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVP----NDPSFEDMRKVV 250
Query: 281 IIEDKSCTCTGK---EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ + + + L + +L +C +P R T + + K L ++
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 105 SRMSHKHIIKL---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
S ++H +I+KL +V E V G L +H + + +L++ +DIA
Sbjct: 78 SNLNHPNIVKLYGLMHNPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF-----NEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
+ Y+ + PIV+RD++ NI N AK+ DF LS H + ++
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVH-SVSGLL 187
Query: 211 GTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSF 253
G ++APE E+ D Y F L+ +LT + D S+
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIVFE------ 119
+ ++++G WQ ++++ K +R++ + W +Y + M H++I+ I +
Sbjct: 50 YGEVWRGSWQGENVAV-KIFSSRDEKS--WFRETELYNTVMLRHENILGFIASDMTSRHS 106
Query: 120 SVQIGTLADRIHHHCEQHFEALSLTDR-----LKVAMDIAHAVAYLHVGF----SRP-IV 169
S Q+ + +H ++ L LT L++ + IA +A+LH+ +P I
Sbjct: 107 STQLWLITH--YHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 164
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPENFTTLINE 227
+RD+K NIL + + D L++ +++ + VGT ++APE I
Sbjct: 165 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 224
Query: 228 QC-------DVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSI 280
C D++ FG L+E + + VS+ + + + + + V + F++M +
Sbjct: 225 DCFDSYKRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVP----NDPSFEDMRKVV 279
Query: 281 IIEDKSCTCTGK---EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ + + + L + +L +C +P R T + + K L ++
Sbjct: 280 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ DF L+ D E+ V T
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVAT 214
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHVS 252
+ APE + N D++ G + ELLT + + +DH++
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 142
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L T ++APE ++ CD
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 231 VYGFGAFLFELL 242
++ G ++ LL
Sbjct: 200 MWSLGVIMYILL 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 101 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 158
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 159 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
Query: 241 LLTAQ 245
+ +
Sbjct: 215 MAVGR 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H++I+ L +V + V G L DRI E+ F + D
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI---VEKGF--YTEKDAS 123
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
+ + AV YLH IV+RD+KP N+L+ +E+S + DF LS G+
Sbjct: 124 TLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV-- 178
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELL 242
+ + GT G++APE ++ D + G + LL
Sbjct: 179 -MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 31/174 (17%)
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
K+A+ I A+ +LH S +++RD+KP+N+L N K+ DF +S + D + D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKD 167
Query: 208 SVVGTTGFIAPENFTTLINE-----QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
G ++APE +N+ + D++ G + EL RF Y+
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL-----------RFPYDS- 215
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
F+++ ++E+ S + + F T QC+ + ++RPT
Sbjct: 216 ------WGTPFQQLKQ--VVEEPSPQLPADKFSAE-FVDFTSQCLKKNSKERPT 260
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD----- 207
I A++Y+H S+ I++R++KP NI +E + K+ DF L+ ++ ++LD
Sbjct: 125 ILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 208 -------SVVGTTGFIAPE--NFTTLINEQCDVYGFGAFLFELL 242
S +GT ++A E + T NE+ D Y G FE +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A +IA A+ YLH S IVYRD+KP NIL + Q L DF L + +IE +S
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLC------KENIEHNST 195
Query: 210 V----GTTGFIAPENF-TTLINEQCDVYGFGAFLFELL 242
GT ++APE + D + GA L+E+L
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + +S VG
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 212 TTGFIAPENFTTLINEQC---DVYGFGAFLFELLTA 244
T +++PE T C D++ G +++L+
Sbjct: 194 TAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAG 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 233 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++R++
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRNLAA 346
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 347 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 406 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 443
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 104/275 (37%), Gaps = 43/275 (15%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y G W+K S+++ + +E + + H ++++L
Sbjct: 45 YGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFY 104
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G L D + + A+ L L +A I+ A+ YL + ++RD+
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAMEYLE---KKNFIHRDLAA 158
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 159 RNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 235 GAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
G L+E+ T + + E R+ ++ C K
Sbjct: 218 GVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM-----------------EQPEGCPPK- 259
Query: 294 QQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
+L C +SP DRP+ + + M+
Sbjct: 260 -----VYELMRACWKWSPADRPSFAETHQAFETMF 289
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + +S VG
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 230 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 289
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++R++
Sbjct: 290 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAA 343
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 344 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 402
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 403 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 440
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 40/218 (18%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
I E GTL I ++ E L L++ I V Y+H S+ +++RD+K
Sbjct: 110 FIQMEFCDKGTLEQWIE---KRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLK 163
Query: 175 PTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTL-INEQCDVY 232
P+NI + K+ DF L S+ DG+ GT +++PE ++ ++ D+Y
Sbjct: 164 PSNIFLVDTKQVKIGDFGLVTSLKNDGKRT----RSKGTLRYMSPEQISSQDYGKEVDLY 219
Query: 233 GFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGK 292
G L ELL V D S+F F ++ D II S K
Sbjct: 220 ALGLILAELL---HVCDTAFETSKF---------------FTDLRDGII----SDIFDKK 257
Query: 293 EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
E K L + + PEDRP ++ + L +S
Sbjct: 258 E------KTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 289
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 49/247 (19%)
Query: 98 INHIVYASRMSHKHIIKLI----------VFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
++ V + H HI+KLI + E G L H+ E++ +L + +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLV 116
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
++ I A+AYL S V+RD+ NIL KL DF LS I D E + +
Sbjct: 117 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 172
Query: 208 SVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
+++PE+ FTT DV+ F ++E+L+ + F + EN
Sbjct: 173 VTRLPIKWMSPESINFRRFTT----ASDVWMFAVCMWEILSFG--------KQPFFWLEN 220
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK 322
D I + +K + L +C D+ P DRP ++
Sbjct: 221 --------------KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266
Query: 323 QLRQMYR 329
L +Y+
Sbjct: 267 SLSDVYQ 273
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 49/247 (19%)
Query: 98 INHIVYASRMSHKHIIKLI----------VFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
++ V + H HI+KLI + E G L H+ E++ +L + +
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLV 128
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
++ I A+AYL S V+RD+ NIL KL DF LS I D E + +
Sbjct: 129 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 184
Query: 208 SVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
+++PE+ FTT DV+ F ++E+L+ + F + EN
Sbjct: 185 VTRLPIKWMSPESINFRRFTT----ASDVWMFAVCMWEILSFG--------KQPFFWLEN 232
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK 322
D I + +K + L +C D+ P DRP ++
Sbjct: 233 --------------KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 278
Query: 323 QLRQMYR 329
L +Y+
Sbjct: 279 SLSDVYQ 285
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 49/247 (19%)
Query: 98 INHIVYASRMSHKHIIKLI----------VFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
++ V + H HI+KLI + E G L H+ E++ +L + +
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLV 112
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
++ I A+AYL S V+RD+ NIL KL DF LS I D E + +
Sbjct: 113 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKAS 168
Query: 208 SVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
+++PE+ FTT DV+ F ++E+L+ + F + EN
Sbjct: 169 VTRLPIKWMSPESINFRRFTT----ASDVWMFAVCMWEILSFG--------KQPFFWLEN 216
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK 322
D I + +K + L +C D+ P DRP ++
Sbjct: 217 --------------KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 262
Query: 323 QLRQMYR 329
L +Y+
Sbjct: 263 SLSDVYQ 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 55/259 (21%)
Query: 80 ISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK------LIVFESVQIGTLADRIHHH 133
++++ YNG C + Y S K+ + I E GTL I
Sbjct: 64 VNIVHYNG---------CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-- 112
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL 193
++ E L L++ I V Y+H S+ ++ RD+KP+NI + K+ DF L
Sbjct: 113 -KRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 194 SLSIP-DGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQEVSDHV 251
S+ DG+ GT +++PE ++ ++ D+Y G L ELL V D
Sbjct: 169 VTSLKNDGKRX----RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTA 221
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSP 311
S+F F ++ D II S KE K L + + P
Sbjct: 222 FETSKF---------------FTDLRDGII----SDIFDKKE------KTLLQKLLSKKP 256
Query: 312 EDRPTMVDVAKQLRQMYRS 330
EDRP ++ + L +S
Sbjct: 257 EDRPNTSEILRTLTVWKKS 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------- 115
+ ++Y+G W+K S+++ + +E + + H ++++L
Sbjct: 272 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 331
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
I+ E + G L D + Q A+ L L +A I+ A+ YL + ++R++
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAA 385
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
N L E K+ DF LS + G+T+ + APE+ + + DV+ F
Sbjct: 386 RNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 444
Query: 235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ 294
G L+E+ T +S + + YE + +K E
Sbjct: 445 GVLLWEIATYG-MSPYPGIDLSQVYE---------------------LLEKDYRMERPEG 482
Query: 295 QLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+ +L C ++P DRP+ ++ + M++
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 166
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 167 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
Query: 241 LLTAQ 245
+ +
Sbjct: 223 MAVGR 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 105 SRMSHKHIIKL---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
S ++H +I+KL +V E V G L +H + + +L++ +DIA
Sbjct: 78 SNLNHPNIVKLYGLMHNPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILF-----NEQSDAKLFDFSLSLSIPDGETHIELDSVV 210
+ Y+ + PIV+RD++ NI N AK+ DF G + + SV
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF--------GTSQQSVHSVS 184
Query: 211 GTTG---FIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSF 253
G G ++APE E+ D Y F L+ +LT + D S+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL--SIPDGETHIELDSVVGTT 213
+AY H + +++RD+KP N+L NE+ + KL DF L+ SIP +T+ D+ V T
Sbjct: 112 GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTY---DNEVVTL 164
Query: 214 GFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHY 259
+ P+ +T + Q D++G G +E+ T + + + E + H+
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 101 IVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRL------KVAMD 152
I Y + H HIIKL ++ +I + I + + F+ + D++ +
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMV---IEYAGNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H IV+RD+KP N+L +E + K+ DF LS + DG L + G+
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGS 175
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
+ APE + + + DV+ G L+ +L
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H +I+ L ++ + V G L DRI E+ F + D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF--YTERDAS 119
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
++ + AV YLH IV+RD+KP N+L+ +E S + DF LS G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
L + GT G++APE ++ D + G + LL
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 101 IVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRL------KVAMD 152
I Y + H HIIKL ++ +I + I + + F+ + D++ +
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMV---IEYAGNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H IV+RD+KP N+L +E + K+ DF LS + DG L + G+
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGS 174
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
+ APE + + + DV+ G L+ +L
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 30/171 (17%)
Query: 93 ALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM- 151
+E I ++ H +++KL+ L D H FE ++ ++V
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLV-------EVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 152 -------------DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
D+ + YLH + I++RD+KP+N+L E K+ DF +S
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 199 DGETHIELDSVVGTTGFIAPENFT----TLINEQCDVYGFGAFLFELLTAQ 245
+ L + VGT F+APE+ + + DV+ G L+ + Q
Sbjct: 189 GSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 101 IVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRL------KVAMD 152
I Y + H HIIKL ++ +I + I + + F+ + D++ +
Sbjct: 55 ISYLRLLRHPHIIKLYDVIKSKDEIIMV---IEYAGNELFDYIVQRDKMSEQEARRFFQQ 111
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H IV+RD+KP N+L +E + K+ DF LS + DG L + G+
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGS 165
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
+ APE + + + DV+ G L+ +L
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 139
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 241 LLTAQ 245
+ +
Sbjct: 196 MAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 139
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 241 LLTAQ 245
+ +
Sbjct: 196 MAVGR 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H +I+ L ++ + V G L DRI E+ F + D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF--YTERDAS 119
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
++ + AV YLH IV+RD+KP N+L+ +E S + DF LS G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELL 242
L + GT G++APE ++ D + G + LL
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ F L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H +I+ L ++ + V G L DRI E+ F + D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF--YTERDAS 119
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
++ + AV YLH IV+RD+KP N+L+ +E S + DF LS G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELL 242
L + GT G++APE ++ D + G + LL
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 26/133 (19%)
Query: 126 LADRIHHHCEQHFEALSLTDR-----LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF 180
L D ++ C SL DR L + + IA AV +LH S+ +++RD+KP+NI F
Sbjct: 148 LKDWMNRRC-------SLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFF 197
Query: 181 NEQSDAKLFDFSLSLSI-PDGETHIELDSV---------VGTTGFIAPENF-TTLINEQC 229
K+ DF L ++ D E L + VGT +++PE + +
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 230 DVYGFGAFLFELL 242
D++ G LFELL
Sbjct: 258 DIFSLGLILFELL 270
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 93 LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 143
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 203
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 204 WSFGVVLYELFTYIEKS 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 139
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 241 LLTAQ 245
+ +
Sbjct: 196 MAVGR 200
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 101 IVYASRMSHKHIIKLIVFESVQIGT-LADRIHHHCEQHFEALSLTDRL------KVAMDI 153
I Y + H HIIKL ++ + T + I + + F+ + R+ + I
Sbjct: 60 ISYLKLLRHPHIIKL--YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTT 213
A+ Y H IV+RD+KP N+L ++ + K+ DF LS + DG L + G+
Sbjct: 118 ICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSP 171
Query: 214 GFIAPE--NFTTLINEQCDVYGFGAFLFELLTAQ 245
+ APE N + DV+ G L+ +L +
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A +I + +LH S+ IVYRD+K NIL ++ K+ DF + G+ + +
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNEF 179
Query: 210 VGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH 258
GT +IAPE N D + FG L+E+L Q E FH
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 101 IVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRL------KVAMD 152
I Y + H HIIKL ++ +I + I + + F+ + D++ +
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMV---IEYAGNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H IV+RD+KP N+L +E + K+ DF LS + DG L + G+
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGS 169
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELL 242
+ APE + + + DV+ G L+ +L
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H +I+ L ++ + V G L DRI E+ F + D
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGF--YTERDAS 119
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
++ + AV YLH IV+RD+KP N+L+ +E S + DF LS G
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-- 174
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
L + GT G++APE ++ D + G + LL
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 139
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 241 LLTAQ 245
+ +
Sbjct: 196 MAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 139
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 241 LLTAQ 245
+ +
Sbjct: 196 MAVGR 200
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 89 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 139
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 140 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 199
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 200 WSFGVVLYELFTYIEKS 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 144 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 201
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D +S VGT +++PE T + Q D++ G L E
Sbjct: 202 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
Query: 241 LLTAQ 245
+ +
Sbjct: 258 MAVGR 262
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I + YLH S ++RD+K N+L +E + KL DF ++ + D T I+ ++ VG
Sbjct: 112 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 166
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH--------YEEN 262
T ++APE + + + D++ G +TA E++ S H + N
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLG------ITAIELARGEPPHSELHPMKVLFLIPKNN 220
Query: 263 VKRLSGQNCR-FKEMVDSIIIEDKSCTCTGKE 293
L G + KE V++ + ++ S T KE
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKE 252
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 94 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 144
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 145 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 204
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 205 WSFGVVLYELFTYIEKS 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + ++ VG
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A +I + +LH S+ IVYRD+K NIL ++ K+ DF + G+ + +
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNXF 178
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH 258
GT +IAPE N D + FG L+E+L Q E FH
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 126 LADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD 185
L + +H +Q+ T +L + ++ A+ YL ++ I++RDMKP NIL +E
Sbjct: 98 LGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGH 153
Query: 186 AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE----QCDVYGFGAFLFEL 241
+ DF+++ +P ET I ++ GT ++APE F++ D + G +EL
Sbjct: 154 VHITDFNIAAMLP-RETQIT--TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
Query: 242 LTAQ 245
L +
Sbjct: 211 LRGR 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 140
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 201 WSFGVVLYELFTYIEKS 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 108 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 158
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 218
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 219 WSFGVVLYELFTYIEKS 235
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 95 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 145
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 146 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 205
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 206 WSFGVVLYELFTYIEKS 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI-PDGETHIE 205
L + + IA AV +LH S+ +++RD+KP+NI F K+ DF L ++ D E
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 206 LDSV---------VGTTGFIAPENF-TTLINEQCDVYGFGAFLFELL 242
L + VGT +++PE + + D++ G LFELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 88 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 138
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 139 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 198
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 199 WSFGVVLYELFTYIEKS 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 93 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 143
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 203
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 204 WSFGVVLYELFTYIEKS 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
K+A+ I A+ +LH S +++RD+KP+N+L N K+ DF +S + D +D
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT-ID 213
Query: 208 SVVGTTGFIAPENFTTLINE-----QCDVYGFGAFLFEL 241
+ G ++APE +N+ + D++ G + EL
Sbjct: 214 A--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ D L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 108 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 158
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 159 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 218
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 219 WSFGVVLYELFTYIEKS 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 96 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 146
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 147 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 206
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 207 WSFGVVLYELFTYIEKS 223
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 140
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 201 WSFGVVLYELFTYIEKS 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQ 228
+RD+KP NIL + A L DF ++ + D E +L + VGT + APE F+ + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTD-EKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 229 CDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIII---- 282
D+Y L+E LT D +S H + + R S D++I
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXG-AHINQAIPRPSTVRPGIPVAFDAVIARGXA 274
Query: 283 ---EDKSCTC 289
ED+ TC
Sbjct: 275 KNPEDRYVTC 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 97 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 147
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 148 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 207
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 208 WSFGVVLYELFTYIEKS 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 140
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF-IAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P + ++ + F APE+ T + + DV
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDV 200
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 201 WSFGVVLYELFTYIEKS 217
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 171
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 172 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 231
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 232 WSFGVVLYELFTYIEKS 248
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ D L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 139 EALSLTDRLKVAMDIAHAV-AYLHVGFSRPIVYRDMKPTNILF--NEQSDAKLFDFSLS- 194
E+L R K+ +I + + LH ++ I +RD+KP N LF N+ + KL DF LS
Sbjct: 159 ESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218
Query: 195 --LSIPDGETHIELDSVVGTTGFIAPENFTTLINE----QCDVYGFGAFLFELLTA 244
+ +GE + + + GT F+APE T NE +CD + G L LL
Sbjct: 219 EFYKLNNGE-YYGMTTKAGTPYFVAPEVLNT-TNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I + Y+H S I++RD+KP+N+ NE + K+ D L+ D E+ V T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMTGYVAT 185
Query: 213 TGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
+ APE + N+ D++ G + ELLT + + +DH+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ Y+H S I++RD+KP+N+ NE S+ ++ DF L+ + E+ V T +
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRWY 194
Query: 216 IAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + N+ D++ G + ELL + + SD++
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ Y+H S I++RD+KP+N+ NE S+ ++ DF L+ + E+ V T +
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRWY 194
Query: 216 IAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + N+ D++ G + ELL + + SD++
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I++L +VF+ V G L + I E S D I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 138
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVG 211
++AY H S IV+R++KP N+L ++ KL DF L++ + D E G
Sbjct: 139 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 192
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTA 244
T G+++PE ++ D++ G L+ LL
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 116 IVFESVQIGTLADRIHHHC-EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
IV E + G LA I E+ + R+ + +A + +++RD+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYG 233
P N+ + + + KL DF L+ + E + VGT +++PE + NE+ D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 234 FGAFLFEL 241
G L+EL
Sbjct: 202 LGCLLYEL 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 212 TTGFIAPENFTTLINEQC---DVYGFGAFLFELLTA 244
T +++PE T C D++ G +++L+
Sbjct: 194 TAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAG 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I + YLH S ++RD+K N+L +E + KL DF ++ + D T I+ + VG
Sbjct: 127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVG 181
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH--------YEEN 262
T ++APE + + + D++ G +TA E++ S H + N
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLG------ITAIELARGEPPHSELHPMKVLFLIPKNN 235
Query: 263 VKRLSGQNCR-FKEMVDSIIIEDKSCTCTGKE 293
L G + KE V++ + ++ S T KE
Sbjct: 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKE 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L D + H E+ H + L T ++ M+ Y+H R++
Sbjct: 91 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RNL 141
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF-IAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P + + ++ + F APE+ T + + DV
Sbjct: 142 ATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDV 201
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 202 WSFGVVLYELFTYIEKS 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 116 IVFESVQIGTLADRIHHHC-EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
IV E + G LA I E+ + R+ + +A + +++RD+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYG 233
P N+ + + + KL DF L+ I + +T + VGT +++PE + NE+ D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLA-RILNHDTSFA-KTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 234 FGAFLFEL 241
G L+EL
Sbjct: 202 LGCLLYEL 209
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ + I A+ YLH S I +RD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASE---IXKSIGEAIQYLH---SINIAHRDVK 188
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCD 230
P N+L+ + KL DF + + +H L + T ++APE ++ CD
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 231 VYGFGAFLFELL 242
+ G + LL
Sbjct: 246 XWSLGVIXYILL 257
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I + YLH S ++RD+K N+L +E + KL DF ++ + D T I+ + VG
Sbjct: 112 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVG 166
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH--------YEEN 262
T ++APE + + + D++ G +TA E++ S H + N
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLG------ITAIELARGEPPHSELHPMKVLFLIPKNN 220
Query: 263 VKRLSGQNCR-FKEMVDSIIIEDKSCTCTGKE 293
L G + KE V++ + ++ S T KE
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKE 252
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 116 IVFESVQIGTLADRIHHHC-EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
IV E + G LA I E+ + R+ + +A + +++RD+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYG 233
P N+ + + + KL DF L+ I + +T + VGT +++PE + NE+ D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLA-RILNHDTSFA-KAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 234 FGAFLFEL 241
G L+EL
Sbjct: 202 LGCLLYEL 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I + YLH S ++RD+K N+L +E + KL DF ++ + D T I+ ++ VG
Sbjct: 132 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 186
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH--------YEEN 262
T ++APE + + + D++ G +TA E++ S H + N
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLG------ITAIELARGEPPHSELHPMKVLFLIPKNN 240
Query: 263 VKRLSGQNCR-FKEMVDSIIIEDKSCTCTGKE 293
L G + KE V++ + ++ S T KE
Sbjct: 241 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKE 272
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I++L +VF+ V G L + I E S D I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 114
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVG 211
++AY H S IV+R++KP N+L ++ KL DF L++ + D E G
Sbjct: 115 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 168
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTA 244
T G+++PE ++ D++ G L+ LL
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I++L +VF+ V G L + I E S D I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 115
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVG 211
++AY H S IV+R++KP N+L ++ KL DF L++ + D E G
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 169
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTA 244
T G+++PE ++ D++ G L+ LL
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 58/245 (23%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH +++L +VFE ++ G L+D + F A +L L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETL---LGMCLDVC 113
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+AYL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTG 163
Query: 215 ------FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS 267
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR----- 208
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLR 325
+S ++ED S + +L + Q+ C PEDRP + +QL
Sbjct: 209 ---------SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 259
Query: 326 QMYRS 330
++ S
Sbjct: 260 EIAES 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++ H +I++L +VF+ V G L + I E S D I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 115
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVG 211
++AY H S IV+R++KP N+L ++ KL DF L++ + D E G
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAG 169
Query: 212 TTGFIAPENFTT-LINEQCDVYGFGAFLFELLTA 244
T G+++PE ++ D++ G L+ LL
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 58/245 (23%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH +++L +VFE ++ G L+D + F A +L L + +D+
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETL---LGMCLDVC 116
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+AYL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTG 166
Query: 215 ------FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS 267
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR----- 211
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLR 325
+S ++ED S + +L + Q+ C PEDRP + +QL
Sbjct: 212 ---------SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262
Query: 326 QMYRS 330
++ S
Sbjct: 263 EIAES 267
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ YLH + I++RD+KP NIL NE ++ DF + + + VG
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 212 TTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
T +++PE T + D++ G +++L+
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 58/245 (23%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH +++L +VFE ++ G L+D + F A +L L + +D+
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETL---LGMCLDVC 111
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+AYL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTG 161
Query: 215 ------FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS 267
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR----- 206
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLR 325
+S ++ED S + +L + Q+ C PEDRP + +QL
Sbjct: 207 ---------SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257
Query: 326 QMYRS 330
++ S
Sbjct: 258 EIAES 262
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T + +
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKT 164
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 58/245 (23%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH +++L +VFE ++ G L+D + F A +L L + +D+
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETL---LGMCLDVC 133
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+AYL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTG 183
Query: 215 ------FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS 267
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR----- 228
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLR 325
+S ++ED S + +L + Q+ C PEDRP + +QL
Sbjct: 229 ---------SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 279
Query: 326 QMYRS 330
++ S
Sbjct: 280 EIAES 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 18/113 (15%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI- 197
E +++ D + + +A + +L SR ++RD+ NIL +E + K+ DF L+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 198 --PD----GETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
PD G+T + L ++APE+ F + + + DV+ +G L+E+ +
Sbjct: 251 KNPDYVRKGDTRLPLK-------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T + +
Sbjct: 114 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKT 167
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T + +
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKT 164
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 53 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 102
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 103 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N SD K+ DF L+ ++ PD + L V
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 104/268 (38%), Gaps = 55/268 (20%)
Query: 67 FRKLYKGFWQ---KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------- 115
F +++ G W + +I +K GN + A + ++ H+ +++L
Sbjct: 198 FGEVWMGTWNGTTRVAIKTLK-PGNMSPEAF---LQEAQVMKKLRHEKLVQLYAVVSEEP 253
Query: 116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
IV E + G+L D + ++ L D +A IA +AY+ V+RD+
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNYVHRDL 307
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-----NFTTLINEQ 228
+ NIL E K+ DF L I D E + + APE FT +
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI----K 362
Query: 229 CDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCT 288
DV+ FG L EL T + R Y V R E++D + ++
Sbjct: 363 SDVWSFGILLTELTT----------KGRVPYPGMVNR---------EVLDQV---ERGYR 400
Query: 289 CTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ ++ L QC PE+RPT
Sbjct: 401 MPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 58/247 (23%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH +++L +VFE ++ G L+D + F A +L L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETL---LGMCLDVC 113
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+AYL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTG 163
Query: 215 ------FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS 267
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR----- 208
Query: 268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLR 325
+S ++ED S + +L + Q+ C PEDRP + +QL
Sbjct: 209 ---------SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 259
Query: 326 QMYRSCM 332
+ S +
Sbjct: 260 AIAASGL 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSV 209
I A+ Y H I++RD+KP N+L + ++ KL DF +++ + GE+ +
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGR 193
Query: 210 VGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
VGT F+APE + DV+G G LF LL+
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKX 164
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 28/172 (16%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLH-VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGET 202
D + + V YLH +G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 203 HIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 28/172 (16%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLH-VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGET 202
D + + V YLH +G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 203 HIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 55 EICIN-----AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 104
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 95 EWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSL 143
E CIN + ++H++++K + E G L DRI +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPE 103
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH 203
D + + V YLH G I +RD+KP N+L +E+ + K+ DF L+
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 204 IELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
L+ + GT ++APE E DV+ G L +L + D S
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD 172
I+ + E G L DRI + D + + V YLH G I +RD
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLH-GIG--ITHRD 129
Query: 173 MKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCD 230
+KP N+L +E+ + K+ DF L+ L+ + GT ++APE E D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 231 VYGFGAFLFELLTAQEVSDHVS 252
V+ G L +L + D S
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPS 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 106 RMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHF-----EALSLTDRLKVAMDIAHAVA 158
++SH +++L + E I + + + H C + + L + +D+ +A
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 118
Query: 159 YLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG---- 214
YL +++RD+ N L E K+ DF ++ + D D +TG
Sbjct: 119 YLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFP 168
Query: 215 --FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC 271
+ +PE F+ + + + DV+ FG ++E+ + E + YE
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS----------EGKIPYENR--------- 209
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQA--FKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
+S ++ED S + +L + Q+ C PEDRP + +QL ++
Sbjct: 210 -----SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
Query: 330 S 330
S
Sbjct: 265 S 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 134 CEQHFEALSLTDRLK------------VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
C +H + SL LK V++ + + YL I++RD+KP+NIL N
Sbjct: 85 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 142
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGFGAFLFE 240
+ + KL DF +S + D + VGT +++PE T + Q D++ G L E
Sbjct: 143 SRGEIKLCDFGVSGQLIDEMA----NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 198
Query: 241 LLTAQEVSDHVSFESRFHY--EENVKRLSGQ--NCRFKEMVDSIIIEDKSCTCTGKEQQL 296
+ + ++ Y E +L + F++ V+ +I++ + K+ +
Sbjct: 199 MAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
Query: 297 QAF-KQLTLQCMDFS 310
AF K+ + +DF+
Sbjct: 259 HAFIKRSDAEEVDFA 273
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKX 164
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 116 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKX 169
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD 172
I+ + E G L DRI + D + + V YLH G I +RD
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLH-GIG--ITHRD 129
Query: 173 MKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCD 230
+KP N+L +E+ + K+ DF L+ L+ + GT ++APE E D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 231 VYGFGAFLFELLTAQEVSDHVS 252
V+ G L +L + D S
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPS 211
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 67 FRKLYKGFWQ------KRSISLMKYNGNRNQHA-LEWCINHIVYASRMSHKHIIKLI-VF 118
F +YKG W K +++ N A +E+ ++ AS M H H+++L+ V
Sbjct: 28 FGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS-MDHPHLVRLLGVC 86
Query: 119 ESVQIGTLADRIHHHC-----EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
S I + + H C +H + + L + IA + YL R +V+RD+
Sbjct: 87 LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDL 143
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-----NFTTLINEQ 228
N+L + K+ DF L+ + E D ++A E FT Q
Sbjct: 144 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT----HQ 199
Query: 229 CDVYGFGAFLFELLT 243
DV+ +G ++EL+T
Sbjct: 200 SDVWSYGVTIWELMT 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH SR +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKX 164
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD 172
I+ + E G L DRI + D + + V YLH G I +RD
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLH-GIG--ITHRD 130
Query: 173 MKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCD 230
+KP N+L +E+ + K+ DF L+ L+ + GT ++APE E D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 190
Query: 231 VYGFGAFLFELLTAQEVSDHVS 252
V+ G L +L + D S
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPS 212
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFDFSLSL 195
E +S D +++ I V YLH IV+ D+KP NIL + D K+ DF +S
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 196 SIPDGETHIELDSVVGTTGFIAPE--NFTTLINEQCDVYGFGAFLFELLT 243
I EL ++GT ++APE N+ I D++ G + LLT
Sbjct: 183 KIGHA---CELREIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLT 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 125
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 126 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 172
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 99 NHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
N I ++ H++I+ L +V + V G L DRI + D
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-----VYTEKDAS 109
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSIPDGETHI 204
V + AV YLH IV+RD+KP N+L+ E S + DF LS +G
Sbjct: 110 LVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---- 162
Query: 205 ELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELL 242
+ + GT G++APE ++ D + G + LL
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 62 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 118
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 119 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 174
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 175 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 215
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 216 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 67 FRKLYKGFWQ------KRSISLMKYNGNRNQHA-LEWCINHIVYASRMSHKHIIKLI-VF 118
F +YKG W K +++ N A +E+ ++ AS M H H+++L+ V
Sbjct: 51 FGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS-MDHPHLVRLLGVC 109
Query: 119 ESVQIGTLADRIHHHC-----EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
S I + + H C +H + + L + IA + YL R +V+RD+
Sbjct: 110 LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDL 166
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-----NFTTLINEQ 228
N+L + K+ DF L+ + E D ++A E FT Q
Sbjct: 167 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT----HQ 222
Query: 229 CDVYGFGAFLFELLT 243
DV+ +G ++EL+T
Sbjct: 223 SDVWSYGVTIWELMT 237
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 125
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 126 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 172
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 125
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 126 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 172
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 291
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 347
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 348 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 388
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 389 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL-SIPDGETHIELDS 208
A +I A+ +LH + I+YRD+K N+L + + KL DF + I +G T +
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA---T 183
Query: 209 VVGTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFES 255
GT +IAPE ++ D + G L+E+L H FE+
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-----HAPFEA 226
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 70 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 124
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 125 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 171
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 60 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 116
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 117 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 172
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 173 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 213
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 214 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 252
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
++ E + G+L + + H E+ H + L T ++ M+ Y+H RD+
Sbjct: 93 LIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH---------RDL 143
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFT-TLINEQCDV 231
NIL ++ K+ DF L+ +P D E + + APE+ T + + DV
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 203
Query: 232 YGFGAFLFELLTAQEVS 248
+ FG L+EL T E S
Sbjct: 204 WSFGVVLYELFTYIEKS 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D L + +A +A+L S+ ++RD+ N+L AK+ DF L+ I
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ +I + ++APE+ F + Q DV+ +G L+E+ +
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+A+D H + Y+H RD+KP N+L + +L DF L + D T ++
Sbjct: 202 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSV 251
Query: 209 VVGTTGFIAPENFTTL------INEQCDVYGFGAFLFELLTAQ 245
VGT +I+PE + +CD + G ++E+L +
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+A+D H + Y+H RD+KP N+L + +L DF L + D T ++
Sbjct: 186 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSV 235
Query: 209 VVGTTGFIAPENFTTL------INEQCDVYGFGAFLFELLTAQ 245
VGT +I+PE + +CD + G ++E+L +
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 77 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 131
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 132 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 178
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 291
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 347
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 348 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 388
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 389 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 196 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 250
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 251 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 297
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 291
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 347
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 348 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 388
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 389 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRI-------HHHCEQHFEALSLTDRLK 148
+++H IIK+ IV E ++ G L D++ C+ +F + L
Sbjct: 210 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL----- 264
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIE 205
AV YLH I++RD+KP N+L + Q + K+ DF S + GET +
Sbjct: 265 -------AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL- 311
Query: 206 LDSVVGTTGFIAPENFTTL----INEQCDVYGFGAFLFELLTA 244
+ ++ GT ++APE ++ N D + G LF L+
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 115
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 116 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKW 171
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 172 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 212
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 213 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL-SIPDGETHIELDS 208
A +IA + +L S+ I+YRD+K N++ + + K+ DF + +I DG T
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKX 501
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT +IAPE + D + FG L+E+L Q
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFE-----ALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
L++ E G L + + E + L L D L + +A +A+L S+ +
Sbjct: 126 LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCI 182
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQ 228
+RD+ N+L AK+ DF L+ I + +I + ++APE+ F + Q
Sbjct: 183 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 242
Query: 229 CDVYGFGAFLFELLT 243
DV+ +G L+E+ +
Sbjct: 243 SDVWSYGILLWEIFS 257
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 58 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 114
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 115 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 170
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 171 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 211
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 212 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 250
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+A+D H + Y+H RD+KP NIL + +L DF L + + T ++
Sbjct: 186 IAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSV 235
Query: 209 VVGTTGFIAPENFTTL------INEQCDVYGFGAFLFELLTAQ 245
VGT +I+PE + +CD + G ++E+L +
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 59 QNIVLEDP-----FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHI 112
+ IVL++ F ++++G W+ +++ ++ + W +Y + M H++I
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENI 59
Query: 113 IKLIVFESVQIGT-----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLHV 162
+ I ++ GT L H H F+ L ++ +K+A+ A +A+LH+
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 163 GF----SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGF 215
+P I +RD+K NIL + + D L++ I++ + VGT +
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 216 IAPENFTTLIN-------EQCDVYGFGAFLFEL 241
+APE IN ++ D+Y G +E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 59 QNIVLEDP-----FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHI 112
+ IVL++ F ++++G W+ +++ ++ + W +Y + M H++I
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENI 85
Query: 113 IKLIVFESVQIGT-----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLH- 161
+ I ++ GT L H H F+ L ++ +K+A+ A +A+LH
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 162 --VGF-SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGF 215
VG +P I +RD+K NIL + + D L++ I++ + VGT +
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 216 IAPENFTTLIN-------EQCDVYGFGAFLFEL 241
+APE IN ++ D+Y G +E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELD 207
K+A+ I A+ +LH S +++RD+KP+N+L N K DF +S + D + D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKD 194
Query: 208 SVVGTTGFIAPENFTTLINE-----QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN 262
G + APE +N+ + D++ G EL RF Y+
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAIL-----------RFPYD-- 241
Query: 263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
F+++ ++E+ S + + F T QC+ + ++RPT
Sbjct: 242 -----SWGTPFQQLKQ--VVEEPSPQLPADKFSAE-FVDFTSQCLKKNSKERPT 287
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 59 QNIVLEDP-----FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHI 112
+ IVL++ F ++++G W+ +++ ++ + W +Y + M H++I
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENI 60
Query: 113 IKLIVFESVQIGT-----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLH- 161
+ I ++ GT L H H F+ L ++ +K+A+ A +A+LH
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 162 --VGF-SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGF 215
VG +P I +RD+K NIL + + D L++ I++ + VGT +
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 216 IAPENFTTLIN-------EQCDVYGFGAFLFEL 241
+APE IN ++ D+Y G +E+
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIV 117
Q + + F ++++G W+ +++ ++ + W +Y + M H++I+ I
Sbjct: 14 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIA 70
Query: 118 FESVQIGT-----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLH---VGF 164
++ GT L H H F+ L ++ +K+A+ A +A+LH VG
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 165 -SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPEN 220
+P I +RD+K NIL + + D L++ I++ + VGT ++APE
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 221 FTTLIN-------EQCDVYGFGAFLFEL 241
IN ++ D+Y G +E+
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIV 117
Q + + F ++++G W+ +++ ++ + W +Y + M H++I+ I
Sbjct: 11 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIA 67
Query: 118 FESVQIGT-----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLH---VGF 164
++ GT L H H F+ L ++ +K+A+ A +A+LH VG
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 165 -SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPEN 220
+P I +RD+K NIL + + D L++ I++ + VGT ++APE
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 221 FTTLIN-------EQCDVYGFGAFLFEL 241
IN ++ D+Y G +E+
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ Y+H S I++RD+KP+N+ NE + ++ DF L+ + E+ V T +
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMTGYVATRWY 186
Query: 216 IAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + N+ D++ G + ELL + + SD++
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKLIVFESVQIGT 125
F ++++G W+ +++ ++ + W +Y + M H++I+ I ++ GT
Sbjct: 55 FGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNGT 111
Query: 126 -----LADRIHHHCEQHFEAL-----SLTDRLKVAMDIAHAVAYLH---VGF-SRP-IVY 170
L H H F+ L ++ +K+A+ A +A+LH VG +P I +
Sbjct: 112 WTQLWLVSDYHEHGSL-FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 171 RDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL--DSVVGTTGFIAPENFTTLIN-- 226
RD+K NIL + + D L++ I++ + VGT ++APE IN
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 230
Query: 227 -----EQCDVYGFGAFLFEL 241
++ D+Y G +E+
Sbjct: 231 HFESFKRADIYAMGLVFWEI 250
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
T + APE ++N + D++ G L E+L+ + +
Sbjct: 190 TRWYRAPE---IMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTT 213
V YLH + +++RD+K N+ N+ D K+ DF L+ I DGE +L GT
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTP 190
Query: 214 GFIAPENFTTLINE-QCDVYGFGAFLFELLTAQ 245
+IAPE + + D++ G L+ LL +
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 110 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 168
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 169 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 221 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 279 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 320
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H +++ + +V E ++ G L D I H +
Sbjct: 81 RKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 139
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS----L 193
E ++ V + + A++YLH ++ +++RD+K +IL KL DF +
Sbjct: 140 EEQIA-----TVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 191
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQ-----EV 247
S +P + +VGT ++APE + L + D++ G + E++ + E
Sbjct: 192 SKEVPKRKX------LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP 245
Query: 248 SDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLT 303
R VK L + + +D +++ + S T +E F +L
Sbjct: 246 PLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLA 301
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 147 LKVAMDIAHAVAYLHVGF----SRP-IVYRDMKPTNILFNEQSDAKLFDFSLSLS-IPD- 199
LK+A + +LH +P I +RD+K NIL + + D L++ I D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 200 GETHIELDSVVGTTGFIAPENFTTLINEQ-------CDVYGFGAFLFELLTAQEVSDHVS 252
E I ++ VGT ++ PE +N D+Y FG L+E + + VS +
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIV 255
Query: 253 FESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGK---EQQLQAFKQLTLQCMDF 309
E + Y + L + +++M + + I+ + + ++ L+ +L +C
Sbjct: 256 EEYQLPYHD----LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAH 311
Query: 310 SPEDRPTMVDVAKQLRQMYRS 330
+P R T + V K L +M S
Sbjct: 312 NPASRLTALRVKKTLAKMSES 332
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + ++ L D +A IA +AY+ V+RD++
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNYVHRDLRA 142
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-----NFTTLINEQCD 230
NIL E K+ DF L+ I D E + + APE FT + D
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI----KSD 197
Query: 231 VYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCT 290
V+ FG L EL T + R Y V R E++D + ++
Sbjct: 198 VWSFGILLTELTT----------KGRVPYPGMVNR---------EVLDQV---ERGYRMP 235
Query: 291 GKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ ++ L QC PE+RPT
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS-IPDGETHIELDS 208
A +I+ + +LH R I+YRD+K N++ + + K+ DF + + DG T E
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREF-- 180
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSD 249
GT +IAPE + D + +G L+E+L Q D
Sbjct: 181 -CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTT 213
V YLH + +++RD+K N+ N+ D K+ DF L+ I DGE +L GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTP 206
Query: 214 GFIAPENFTTLINE-QCDVYGFGAFLFELLTAQ 245
+IAPE + + D++ G L+ LL +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 187 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 245
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 246 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 298 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 355
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 356 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 397
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFE-----ALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
L++ E G L + + E + L L D L + +A +A+L S+ +
Sbjct: 118 LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCI 174
Query: 170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQ 228
+RD+ N+L AK+ DF L+ I + +I + ++APE+ F + Q
Sbjct: 175 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 234
Query: 229 CDVYGFGAFLFELLT 243
DV+ +G L+E+ +
Sbjct: 235 SDVWSYGILLWEIFS 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
A +IA + +L S+ I+YRD+K N++ + + K+ DF + +I DG T
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKX 180
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT +IAPE + D + FG L+E+L Q
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 65 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 123
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 124 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 176 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 233
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 234 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 67 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 125
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 126 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 178 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 235
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 236 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 277
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
T + APE ++N + D++ G L E+L+ + +
Sbjct: 190 TRWYRAPE---IMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 38/265 (14%)
Query: 76 QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIG 124
+K +++ + N + Q +++ + I S+ H +I+ +V + + G
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 125 TLADRIHHHCEQHFEALSLTDRLKVAM---DIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
++ D I H + + D +A ++ + YLH ++RD+K NIL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 155
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSV----VGTTGFIAPENFTTL--INEQCDVYGFG 235
E ++ DF +S + G I + V VGT ++APE + + + D++ FG
Sbjct: 156 EDGSVQIADFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 236 AFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQ 295
EL T + +H +K L +++ + + + GK
Sbjct: 215 ITAIELATGA---------APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK--- 262
Query: 296 LQAFKQLTLQCMDFSPEDRPTMVDV 320
+F+++ C+ PE RPT ++
Sbjct: 263 --SFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
T + APE ++N + D++ G L E+L+ + +
Sbjct: 190 TRWYRAPE---IMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 318 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIAS 374
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 375 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 430
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 431 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 471
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 472 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 510
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D ++ IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIAS 122
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 178
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 179 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 219
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 220 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ PD + L V
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
T + APE ++N + D++ G L E+L+ + +
Sbjct: 194 TRWYRAPE---IMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
LS D L + +A +A+L S+ ++RD+ N+L AK+ DF L+ I +
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+I + ++APE+ F + Q DV+ +G L+E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTT 213
V YLH + +++RD+K N+ N+ D K+ DF L+ I DGE ++ GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KTLCGTP 206
Query: 214 GFIAPENFTTLINE-QCDVYGFGAFLFELLTAQ 245
+IAPE + + D++ G L+ LL +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 90 NQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCE--QHFEALSLTDRL 147
N +L+ + ++H +I+KL FE ++ + + + F+ L R+
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 148 KVA------MDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
K I AV Y H F IV+RD+K N+L + + K+ DF S G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
Query: 202 THIELDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+LD+ G+ + APE F + DV+ G L+ L++
Sbjct: 168 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 90 NQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCE--QHFEALSLTDRL 147
N +L+ + ++H +I+KL FE ++ + + + F+ L R+
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 148 KVA------MDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
K I AV Y H F IV+RD+K N+L + + K+ DF S G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
Query: 202 THIELDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+LD+ G+ + APE F + DV+ G L+ L++
Sbjct: 168 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 90 NQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCE--QHFEALSLTDRL 147
N +L+ + ++H +I+KL FE ++ + + + F+ L R+
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 148 KVA------MDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
K I AV Y H F IV+RD+K N+L + + K+ DF S G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
Query: 202 THIELDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+LD+ G+ + APE F + DV+ G L+ L++
Sbjct: 168 ---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ Y+H S +V+RD+KP N+ NE + K+ DF L+ E+ V T +
Sbjct: 138 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWY 189
Query: 216 IAPENFTTLI--NEQCDVYGFGAFLFELLTAQ 245
APE + + N+ D++ G + E+LT +
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 56 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 114
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 115 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 167 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 225 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 200
Query: 199 DGETHIELDSVVGTTG-----FIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
HI+ T G ++APE F + Q DV+ FG L+E+ T
Sbjct: 201 ---HHIDXXKKT-TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH + +VYRD+K N++ ++ K+ DF L I DG T + +
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKT 311
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ Y+H S +V+RD+KP N+ NE + K+ DF L+ E+ V T +
Sbjct: 156 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWY 207
Query: 216 IAPENFTTLI--NEQCDVYGFGAFLFELLTAQ 245
APE + + N+ D++ G + E+LT +
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 38/265 (14%)
Query: 76 QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIG 124
+K +++ + N + Q +++ + I S+ H +I+ +V + + G
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 125 TLADRIHHHCEQHFEALSLTDRLKVAM---DIAHAVAYLHVGFSRPIVYRDMKPTNILFN 181
++ D I H + + D +A ++ + YLH ++RD+K NIL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 150
Query: 182 EQSDAKLFDFSLSLSIPDGETHIELDSV----VGTTGFIAPENFTTL--INEQCDVYGFG 235
E ++ DF +S + G I + V VGT ++APE + + + D++ FG
Sbjct: 151 EDGSVQIADFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 236 AFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQ 295
EL T + +H +K L +++ + + + GK
Sbjct: 210 ITAIELATGA---------APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK--- 257
Query: 296 LQAFKQLTLQCMDFSPEDRPTMVDV 320
+F+++ C+ PE RPT ++
Sbjct: 258 --SFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIAS 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD+ NIL E K+ DF L+ I D E + +
Sbjct: 126 GMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 181
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 182 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 222
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 223 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 67 FRKLYKGFWQKRSI-SLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI--------- 116
F K+YK ++ S+ + K +++ LE + I + H +I+KL+
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 117 -VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+ G D + E+ + K +D A+ YLH I++RD+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH---DNKIIHRDLKA 163
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE------QC 229
NILF D KL DF +S + T DS +GT ++APE ++ +
Sbjct: 164 GNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 230 DVYGFGAFLFEL 241
DV+ G L E+
Sbjct: 222 DVWSLGITLIEM 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A A H+ + I++RD+KP+NIL + + KL DF +S + D I G
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGC 188
Query: 213 TGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQ 245
++APE + Q DV+ G L+EL T +
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E LS D + A +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG L+E+ T
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH + +VYRD+K N++ ++ K+ DF L I DG T + +
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKT 308
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H F IV+RD+K N+L + + K+ DF S G +LD+ G+
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGS 168
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+ APE F + DV+ G L+ L++
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ Y H R +++RD+KP N+L + + K+ DF S+ P + + G
Sbjct: 123 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCG 175
Query: 212 TTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVS 252
T ++ PE +E+ D++ G +E L D S
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ Y H R +++RD+KP N+L + + K+ DF S+ P + + G
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCG 174
Query: 212 TTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVS 252
T ++ PE +E+ D++ G +E L D S
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ Y H R +++RD+KP N+L + + K+ DF S+ P + + G
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCG 174
Query: 212 TTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVS 252
T ++ PE +E+ D++ G +E L D S
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L L D L + +A +A+L S+ ++RD+ N+L AK+ DF L+ I +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+I + ++APE+ F + Q DV+ +G L+E+ +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 67 FRKLYKGFWQKRSISLM---KYNGNRNQHALEWCINHIVYASRMSHKHIIKLI------- 116
F K+YK Q + S++ K +++ LE + I + H +I+KL+
Sbjct: 23 FGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 117 ---VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM 173
+ G D + E+ + K +D A+ YLH I++RD+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH---DNKIIHRDL 134
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIE-LDSVVGTTGFIAPENFTTLINE----- 227
K NILF D KL DF +S + T I+ DS +GT ++APE ++
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 228 -QCDVYGFGAFLFEL 241
+ DV+ G L E+
Sbjct: 193 YKADVWSLGITLIEM 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
++A A+ Y H + +++RD+KP N+L + + K+ DF S+ P + ++ G
Sbjct: 131 ELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCG 183
Query: 212 TTGFIAPENFTTLI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
T ++ PE + NE+ D++ G +ELL FES H E +R+ +
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP-----PFESASH-NETYRRIVKVD 237
Query: 271 CRFKEMVDS 279
+F V +
Sbjct: 238 LKFPASVPT 246
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 48/226 (21%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L IV E + G+L D + ++ L D ++ IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIAS 122
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+AY+ V+RD++ NIL E K+ DF L+ I D E + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKW 178
Query: 216 IAPE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN 270
APE FT + DV+ FG L EL T + R Y V R
Sbjct: 179 TAPEAALYGRFTI----KSDVWSFGILLTELTT----------KGRVPYPGMVNR----- 219
Query: 271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
E++D + ++ + ++ L QC PE+RPT
Sbjct: 220 ----EVLDQV---ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDS 208
DI+ A+ YLH I++RD+KP NI+ K+ D + + GE E
Sbjct: 130 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF-- 184
Query: 209 VVGTTGFIAPE-----NFTTLINEQCDVYGFGAFLFELLTA 244
VGT ++APE +T + D + FG FE +T
Sbjct: 185 -VGTLQYLAPELLEQKKYTVTV----DYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDS 208
DI+ A+ YLH I++RD+KP NI+ K+ D + + GE E
Sbjct: 129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF-- 183
Query: 209 VVGTTGFIAPE-----NFTTLINEQCDVYGFGAFLFELLTA 244
VGT ++APE +T + D + FG FE +T
Sbjct: 184 -VGTLQYLAPELLEQKKYTVTV----DYWSFGTLAFECITG 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 89 RNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQH 137
R Q E N +V H++++++ +V E ++ G L D I H +
Sbjct: 60 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN 118
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI 197
E ++ V + + A++ LH ++ +++RD+K +IL KL DF +
Sbjct: 119 EEQIA-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 170
Query: 198 PDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTAQ-----EVSDHV 251
+ +VGT ++APE + L + D++ G + E++ + E
Sbjct: 171 --SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
Query: 252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
R + +K L + K +D +++ D + T E
Sbjct: 229 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 270
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTT 213
V YLH + +++RD+K N+ N+ D K+ DF L+ I DGE L GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL---CGTP 206
Query: 214 GFIAPENFTTLINE-QCDVYGFGAFLFELLTAQ 245
+IAPE + + D++ G L+ LL +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E ++ G L D+I Q F S + V I V YLH ++ +V+RD+KP
Sbjct: 93 VVTELMKGGELLDKI---LRQKF--FSEREASAVLFTITKTVEYLH---AQGVVHRDLKP 144
Query: 176 TNILFNEQS----DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCD 230
+NIL+ ++S ++ DF + + E + L + T F+APE + CD
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQL-RAENGL-LMTPCYTANFVAPEVLERQGYDAACD 202
Query: 231 VYGFGAFLFELLTA 244
++ G L+ +LT
Sbjct: 203 IWSLGVLLYTMLTG 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 120
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 176
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 177 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 236 P------------------------EELYQLMRLCWKERPEDRPT 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 126
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 127 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 182
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 183 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 242 P------------------------EELYQLMRLCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 125
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 126 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 181
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 182 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 240
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 241 P------------------------EELYQLMRLCWKERPEDRPT 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H F IV+RD+K N+L + + K+ DF S G +LD+ G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN---KLDAFCGA 175
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+ APE F + DV+ G L+ L++
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 90 NQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCE--QHFEALSLTDRL 147
N +L+ + ++H +I+KL FE ++ + + + F+ L R+
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 148 KVA------MDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
K I AV Y H F IV+RD+K N+L + + K+ DF S G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
Query: 202 THIELDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+LD+ G + APE F + DV+ G L+ L++
Sbjct: 168 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 90 NQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCE--QHFEALSLTDRL 147
N +L+ + ++H +I+KL FE ++ + + + F+ L R+
Sbjct: 53 NSSSLQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 148 KVA------MDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
K I AV Y H F IV+RD+K N+L + + K+ DF S G
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN 167
Query: 202 THIELDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+LD G+ + APE F + DV+ G L+ L++
Sbjct: 168 ---KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 115
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 116 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 171
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 172 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 230
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 231 P------------------------EELYQLMRLCWKERPEDRPT 251
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 184
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 130
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 131 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 186
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 187 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 245
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 246 P------------------------EELYQLMRLCWKERPEDRPT 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF L+ + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 75 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 134 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI 189
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 190 NFRRFTSAS-DVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 72 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 131 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 186
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 187 NFRRFTSAS-DVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 73 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 132 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI 187
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 188 NFRRFTSAS-DVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 67 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 126 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 181
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 182 NFRRFTSAS-DVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 184
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 120
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR-EGAKFPIKW 176
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 177 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 236 P------------------------EELYQLMRLCWKERPEDRPT 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 120
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 176
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 177 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 236 P------------------------EELYQLMRLCWKERPEDRPT 256
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 98 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 157 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI 212
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 213 NFRRFTSAS-DVWMFGVCMWEIL 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G+L D + C + + V + A+ +LH S +++RD+K
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLH---SNQVIHRDIKS 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
NIL KL DF I ++ + ++VGT ++APE T + D++
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 235 GAFLFELLTAQ 245
G E++ +
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 110 KHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
KH+ +V E ++ G L D+I Q F S + V I V YLH S+ +V
Sbjct: 94 KHV--YLVTELMRGGELLDKI---LRQKF--FSEREASFVLHTIGKTVEYLH---SQGVV 143
Query: 170 YRDMKPTNILFNEQSDAKL------FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT- 222
+RD+KP+NIL+ ++S F F+ L +G L + T F+APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG----LLMTPCYTANFVAPEVLKR 199
Query: 223 TLINEQCDVYGFGAFLFELLTA 244
+E CD++ G L+ +L
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAG 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G+L D + C + + V + A+ +LH S +++RD+K
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLH---SNQVIHRDIKS 144
Query: 176 TNILFNEQSDAKLFDFSLSLSI-PDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYG 233
NIL KL DF I P+ E+ VGT ++APE T + D++
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 234 FGAFLFELLTAQ 245
G E++ +
Sbjct: 202 LGIMAIEMIEGE 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 79 SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIGTLA 127
+I M Y+G ++ + I + + ++ H + I+ +V E +G+ +
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSAS 141
Query: 128 DRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK 187
D + E H + L + V +AYLH S +++RD+K NIL +E K
Sbjct: 142 DLL----EVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 194
Query: 188 LFDF-SLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQ----CDVYGFGAFLFEL 241
L DF S S+ P + VGT ++APE + Q DV+ G EL
Sbjct: 195 LGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 110 KHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV 169
KH+ +V E ++ G L D+I Q F S + V I V YLH S+ +V
Sbjct: 94 KHV--YLVTELMRGGELLDKI---LRQKF--FSEREASFVLHTIGKTVEYLH---SQGVV 143
Query: 170 YRDMKPTNILFNEQSDAKL------FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT- 222
+RD+KP+NIL+ ++S F F+ L +G L + T F+APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG----LLMTPCYTANFVAPEVLKR 199
Query: 223 TLINEQCDVYGFGAFLFELLTA 244
+E CD++ G L+ +L
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAG 221
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 121
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 122 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 177
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 178 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 236
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 237 P------------------------EELYQLMRLCWKERPEDRPT 257
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 79 SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIGTLA 127
+I M Y+G ++ + I + + ++ H + I+ +V E +G+ +
Sbjct: 44 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSAS 102
Query: 128 DRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK 187
D + E H + L + V +AYLH S +++RD+K NIL +E K
Sbjct: 103 DLL----EVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155
Query: 188 LFDF-SLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQ----CDVYGFGAFLFEL 241
L DF S S+ P + VGT ++APE + Q DV+ G EL
Sbjct: 156 LGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H + IV+RD+K N+L + + K+ DF S G +LD+ G+
Sbjct: 120 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDTFCGS 173
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+ APE F + DV+ G L+ L++
Sbjct: 174 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 48/269 (17%)
Query: 45 SAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYN-GNRNQHALEWCINHIVY 103
+A E + +N ++ + +YKG +R +++ ++ NR E +I
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINE---KNIYR 60
Query: 104 ASRMSHKHIIK----------------LIVFESVQIGTLADRIHHHCEQHFEALSLTDRL 147
M H +I + L+V E G+L + H + L
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL---- 116
Query: 148 KVAMDIAHAVAYLHVGFSR------PIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD-- 199
A + +AYLH R I +RD+ N+L + DF LS+ +
Sbjct: 117 --AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 200 ----GETHIELDSVVGTTGFIAPENFTTLIN--------EQCDVYGFGAFLFELLTAQEV 247
GE S VGT ++APE +N +Q D+Y G +E+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRC 232
Query: 248 SDHVSFESRFHYEENVKRLSGQNCRFKEM 276
+D ES Y+ + G + F++M
Sbjct: 233 TDLFPGESVPEYQMAFQTEVGNHPTFEDM 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 122
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 123 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 178
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 179 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 237
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 238 P------------------------EELYQLMRLCWKERPEDRPT 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 120
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 176
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 177 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 236 P------------------------EELYQLMRLCWKERPEDRPT 256
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q K+ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 24/120 (20%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-------------- 194
V + + YLH G +++RDMKP+NIL N + K+ DF LS
Sbjct: 114 VVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 195 LSIPDGETHIE-----LDSVVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
LSI + + + L V T + APE +T + D++ G L E+L + +
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 126
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 127 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 182
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 183 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 242 P------------------------EELYQLMRLCWKERPEDRPT 262
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H + IV+RD+K N+L + + K+ DF S G +LD+ G+
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN---KLDTFCGS 176
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+ APE F + DV+ G L+ L++
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 129
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 130 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 185
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 186 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 244
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 245 P------------------------EELYQLMRLCWKERPEDRPT 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q K+ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q K+ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G L D+I Q F S + V I V YLH ++ +V+RD+KP
Sbjct: 93 VVTELXKGGELLDKI---LRQKF--FSEREASAVLFTITKTVEYLH---AQGVVHRDLKP 144
Query: 176 TNILFNEQSDAKL------FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQ 228
+NIL+ ++S F F+ L +G L + T F+APE +
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENG----LLXTPCYTANFVAPEVLERQGYDAA 200
Query: 229 CDVYGFGAFLFELLTA 244
CD++ G L+ LT
Sbjct: 201 CDIWSLGVLLYTXLTG 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q K+ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 128
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++RD++ NIL ++ K+ DF L+ I D E + +
Sbjct: 129 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKW 184
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 185 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 243
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 244 P------------------------EELYQLMRLCWKERPEDRPT 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 129 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 184
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 185 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 242 FDITVYLLQGRRLLQPEYC 260
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 132 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 187
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 188 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 245 FDITVYLLQGRRLLQPEYC 263
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 136 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 132 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK- 187
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 188 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 245 FDITVYLLQGRRLLQPEYC 263
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
I AV Y H + IV+RD+K N+L + + K+ DF S G +LD+ G
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDAFCGA 176
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELLTA 244
+ APE F + DV+ G L+ L++
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 131 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 186
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 187 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 244 FDITVYLLQGRRLLQPEYC 262
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 131 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 186
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 187 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 244 FDITVYLLQGRRLLQPEYC 262
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 136 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 191
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 192 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 248
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 249 FDITVYLLQGRRLLQPEYC 267
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 136 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 129 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 184
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L +EQ ++ DF + + G T +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW----XL 185
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
S D L + +A +A+L S+ ++RD+ N+L AK+ DF L+ I +
Sbjct: 162 STRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 202 THIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+I + ++APE+ F + Q DV+ +G L+E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ ++APE F + Q DV+ FG L+E+ +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH + +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKX 168
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS-LSIPDGETHIELDSVVG 211
I + Y+H S +++RD+KP+N+L N D K+ DF L+ ++ P+ + L V
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 212 TTGFIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
T + APE + + D++ G L E+L+ + +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH + +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 115 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKX 169
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G+L D + C + + V + A+ +LH S +++RD+K
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLH---SNQVIHRDIKS 144
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
NIL KL DF I ++ + +VGT ++APE T + D++
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 235 GAFLFELLTAQ 245
G E++ +
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G+L D + C + + V + A+ +LH S +++RD+K
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLH---SNQVIHRDIKS 145
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
NIL KL DF I ++ + +VGT ++APE T + D++
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 235 GAFLFELLTAQ 245
G E++ +
Sbjct: 204 GIMAIEMIEGE 214
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+I A+ YLH + +VYRD+K N++ ++ K+ DF L I DG T +
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKX 170
Query: 209 VVGTTGFIAPENF-TTLINEQCDVYGFGAFLFELLTAQ 245
GT ++APE D +G G ++E++ +
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 145 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 147 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+ +I+ A+ YLH R I+YRD+K N+L + + KL D+ + + G+T +
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TST 212
Query: 209 VVGTTGFIAPENFTTLINE----QCDVYGFGAFLFELLTAQEVSDHVS 252
GT +IAPE L E D + G +FE++ + D V
Sbjct: 213 FCGTPNYIAPE---ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 128 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 185 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 240
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 241 FDITVYLLQGRRLLQPEYC 259
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + +L S+ V+RD+ N + +E+ K+ DF L+ + D
Sbjct: 190 TVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK- 245
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
E DSV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 246 ---EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 303 FDITVYLLQGRRLLQPEYC 321
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 126 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 183 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 238
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 239 FDITVYLLQGRRLLQPEYC 257
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 182 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 136 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ ++APE F + Q DV+ FG L+E+ +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 136 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ ++APE F + Q DV+ FG L+E+ +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 131 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 188 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 244 FDITVYLLQGRRLLQPEYC 262
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 130 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 187 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 243 FDITVYLLQGRRLLQPEYC 261
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAY-------LHVGFSRP 167
+++ E + G L+ + + + D K + + H + Y + SR
Sbjct: 109 MVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLIN 226
++RD+ NIL +E++ K+ DF L+ I + ++APE F +
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 227 EQCDVYGFGAFLFELLT 243
Q DV+ FG L+E+ +
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 123 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 180 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 235
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 236 FDITVYLLQGRRLLQPEYC 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 141 LTLEHLICYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
++ ++APE F + Q DV+ FG L+E+ +
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 131 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 188 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 244 FDITVYLLQGRRLLQPEYC 262
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + F +L L + A ++ A+AYL
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 508
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 509 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 564
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEIL 586
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T ++
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----TL 184
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 129 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 186 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 242 FDITVYLLQGRRLLQPEYC 260
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T ++
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----TL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + + +L L + A ++ A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGE-LRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T + ++APE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLPIKWMAPESI 184
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q ++ DF L+ + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 67 FRKLYKGFWQKRSI-SLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI--------- 116
F K+YK ++ S+ + K +++ LE + I + H +I+KL+
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 117 -VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+ G D + E+ + K +D A+ YLH I++RD+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH---DNKIIHRDLKA 163
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE------QC 229
NILF D KL DF +S + DS +GT ++APE ++ +
Sbjct: 164 GNILFTLDGDIKLADFGVSAK--NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 230 DVYGFGAFLFEL 241
DV+ G L E+
Sbjct: 222 DVWSLGITLIEM 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+++ E V G L D + E+L+ + + I V YLH S+ I + D+K
Sbjct: 105 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLK 156
Query: 175 PTNILFNEQS----DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE--NFTTLINEQ 228
P NI+ +++ KL DF ++ I G E ++ GT F+APE N+ L +
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPL-GLE 212
Query: 229 CDVYGFGAFLFELLTA 244
D++ G + LL+
Sbjct: 213 ADMWSIGVITYILLSG 228
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 150 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 207 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 263 FDITVYLLQGRRLLQPEYC 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 149 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 205
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
+ SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 206 YY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 262 FDITVYLLQGRRLLQPEYC 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+++ E V G L D + E+L+ + + I V YLH S+ I + D+K
Sbjct: 91 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLK 142
Query: 175 PTNILFNEQS----DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE--NFTTLINEQ 228
P NI+ +++ KL DF ++ I G E ++ GT F+APE N+ L +
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPL-GLE 198
Query: 229 CDVYGFGAFLFELLTA 244
D++ G + LL+
Sbjct: 199 ADMWSIGVITYILLSG 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q K+ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+++ E V G L D + E+L+ + + I V YLH S+ I + D+K
Sbjct: 84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLK 135
Query: 175 PTNILFNEQS----DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE--NFTTLINEQ 228
P NI+ +++ KL DF ++ I G E ++ GT F+APE N+ L +
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPL-GLE 191
Query: 229 CDVYGFGAFLFELLTA 244
D++ G + LL+
Sbjct: 192 ADMWSIGVITYILLSG 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T ++
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATW----TL 219
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+ +I+ A+ YLH R I+YRD+K N+L + + KL D+ + + G+T
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSX 180
Query: 209 VVGTTGFIAPENFTTLINE----QCDVYGFGAFLFELLTAQEVSDHVS 252
GT +IAPE L E D + G +FE++ + D V
Sbjct: 181 FCGTPNYIAPE---ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 159 YLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAP 218
Y+H I++RD+KP N+ NE + K+ DF L+ + E+ V T + AP
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAP 194
Query: 219 ENFTTLI--NEQCDVYGFGAFLFELLTAQEV---SDHV 251
E + + D++ G + E++T + + SDH+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 145 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ ++APE F + Q DV+ FG L+E+ +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 106 RMSHKHIIKL----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH 155
++ H+ +++L I+ E ++ G+L D + L++ L +A IA
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAE 116
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+A++ R ++R+++ NIL ++ K+ DF L+ I D E + + +
Sbjct: 117 GMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 172
Query: 216 IAPE--NFTTLINEQCDVYGFGAFLFELLTAQEV--SDHVSFESRFHYEENVKRLSGQNC 271
APE N+ T + DV+ FG L E++T + + E + E + + NC
Sbjct: 173 TAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 231
Query: 272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT 316
+ QL C PEDRPT
Sbjct: 232 P------------------------EELYQLMRLCWKERPEDRPT 252
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD 172
IKLI+ E + G+L + + ++ ++L +LK A+ I + YL SR V+RD
Sbjct: 88 IKLIM-EFLPSGSLKE----YLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRD 139
Query: 173 MKPTNILFNEQSDAKLFDFSLSLSI-PDGETHIELDSVVGTTGFIAPENFT-TLINEQCD 230
+ N+L + K+ DF L+ +I D E D + APE + D
Sbjct: 140 LAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASD 199
Query: 231 VYGFGAFLFELLT 243
V+ FG L ELLT
Sbjct: 200 VWSFGVTLHELLT 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 109 HKHIIKLI-------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH 161
H HI+KLI V+ +++ TL + + F +L L + A ++ A+AYL
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 508
Query: 162 VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-- 219
S+ V+RD+ N+L + KL DF LS + D T+ + ++APE
Sbjct: 509 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESI 564
Query: 220 NFTTLINEQCDVYGFGAFLFELL 242
NF + DV+ FG ++E+L
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEIL 586
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
A+ +LH S+ I++RD+K N+L + D +L DF +S + +T + DS +GT +
Sbjct: 129 ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYW 183
Query: 216 IAPENFT------TLINEQCDVYGFGAFLFEL 241
+APE T + + D++ G L E+
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE ++ GT +IAPE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSKKGH 194
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGK 214
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 193
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL S+ V+RD+ N + +E+ K+ DF L+ + D E
Sbjct: 130 TVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT--AQEVSDHVS 252
SV TG P + L + DV+ FG L+EL+T A D +
Sbjct: 187 X----XSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 253 FESRFHYEENVKRLSGQNC 271
F+ + + + L + C
Sbjct: 243 FDITVYLLQGRRLLQPEYC 261
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE ++ GT +IAPE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSKKGH 194
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE ++ GT +IAPE + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSKKGH 198
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 199 SFEVDVWSIGCIMYTLLVGK 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD 172
IKLI+ E + G+L + + ++ ++L +LK A+ I + YL SR V+RD
Sbjct: 100 IKLIM-EFLPSGSLKE----YLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRD 151
Query: 173 MKPTNILFNEQSDAKLFDFSLSLSI-PDGETHIELDSVVGTTGFIAPENFT-TLINEQCD 230
+ N+L + K+ DF L+ +I D E D + APE + D
Sbjct: 152 LAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASD 211
Query: 231 VYGFGAFLFELLT 243
V+ FG L ELLT
Sbjct: 212 VWSFGVTLHELLT 224
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 130 IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF 189
+ HCE +L D A+A+LH S+ +V+ D+KP NI + KL
Sbjct: 143 LQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLG 199
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEV 247
DF L + + T + G ++APE DV+ G + E+ E+
Sbjct: 200 DFGLLVEL---GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMEL 254
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+V E + G+L D + C + + V + A+ +LH S +++R++K
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLH---SNQVIHRNIKS 145
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGF 234
NIL KL DF I ++ + ++VGT ++APE T + D++
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 235 GAFLFELLTAQ 245
G E++ +
Sbjct: 204 GIMAIEMIEGE 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 49 LRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGN---------RNQHALEWCIN 99
LR+ + D + +L D + K+ +G ++ K++G R Q E N
Sbjct: 34 LRMVVDQGDPR--LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN 91
Query: 100 HIVYASRMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLK 148
+V H +++++ ++ E +Q G L D I + E ++
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIA-----T 145
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
V + A+AYLH ++ +++RD+K +IL KL DF I + +
Sbjct: 146 VCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKX 200
Query: 209 VVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQ 245
+VGT ++APE + +L + D++ G + E++ +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 191
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
A+ +LH S+ I++RD+K N+L + D +L DF +S + +T + DS +GT +
Sbjct: 121 ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYW 175
Query: 216 IAPENFT------TLINEQCDVYGFGAFLFEL 241
+APE T + + D++ G L E+
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 219
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 199
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 22/127 (17%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+A+D H + Y+H RD+KP NIL + +L DF L + T L
Sbjct: 173 MAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL-V 222
Query: 209 VVGTTGFIAPENFTTL--------INEQCDVYGFGAFLFELLTAQEV----SDHVSFESR 256
VGT +++PE + +CD + G F +E+ Q S ++
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
Query: 257 FHYEENV 263
HY+E++
Sbjct: 283 VHYKEHL 289
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+ +I+ A+ YLH R I+YRD+K N+L + + KL D+ + + G+T
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSX 165
Query: 209 VVGTTGFIAPENFTTLINE----QCDVYGFGAFLFELLTAQEVSDHVS 252
GT +IAPE L E D + G +FE++ + D V
Sbjct: 166 FCGTPNYIAPE---ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 210
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 191
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A +A+L S+ ++RD+ NIL K+ DF L+ I + ++ +
Sbjct: 172 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 213 TGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH--YEENVKRLSG 268
++APE+ F + + DV+ +G FL+EL + + +S+F+ +E + LS
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 288
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ EM D + C D P RPT KQ+ Q+
Sbjct: 289 EHAP-AEMYD-----------------------IMKTCWDADPLKRPTF----KQIVQL 319
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A +A+L S+ ++RD+ NIL K+ DF L+ I + ++ +
Sbjct: 170 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 213 TGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH--YEENVKRLSG 268
++APE+ F + + DV+ +G FL+EL + + +S+F+ +E + LS
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 286
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ EM D + C D P RPT KQ+ Q+
Sbjct: 287 EHAP-AEMYD-----------------------IMKTCWDADPLKRPTF----KQIVQL 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A +A+L S+ ++RD+ NIL K+ DF L+ I + ++ +
Sbjct: 177 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 213 TGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH--YEENVKRLSG 268
++APE+ F + + DV+ +G FL+EL + + +S+F+ +E + LS
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ EM D + C D P RPT KQ+ Q+
Sbjct: 294 EHAP-AEMYD-----------------------IMKTCWDADPLKRPTF----KQIVQL 324
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 219
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV + + G L RI+ F+ + D + I A+ ++H R I++RD+K
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWF---VQICLALKHVH---DRKILHRDIKS 153
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELD-SVVGTTGFIAPENF-TTLINEQCDVYG 233
NI + +L DF ++ + + +EL + +GT +++PE N + D++
Sbjct: 154 QNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 234 FGAFLFELLTAQEVSDHVSFES-------------RFHYEENVKRLSGQ----NCRFKEM 276
G L+EL T + + S ++ HY +++ L Q N R +
Sbjct: 211 LGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 277 VDSII 281
V+SI+
Sbjct: 271 VNSIL 275
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + + AL L + + +A +A +AY+ ++RD++
Sbjct: 80 IVTEYMNKGSLLDFLK---DGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRS 133
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-----NFTTLINEQCD 230
NIL K+ DF L+ I D E + + APE FT + D
Sbjct: 134 ANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTI----KSD 188
Query: 231 VYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCT 290
V+ FG L EL+T V + +R E V+R C + C +
Sbjct: 189 VWSFGILLTELVTKGRVP-YPGMNNR-EVLEQVERGYRMPC------------PQDCPIS 234
Query: 291 GKEQQLQAFKQLTLQCMDFSPEDRPT 316
+L + C PE+RPT
Sbjct: 235 --------LHELMIHCWKKDPEERPT 252
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
L+L + + +A + +L SR ++RD+ NIL +E++ K+ DF L+ I
Sbjct: 145 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ ++APE F + Q DV+ FG L+E+ +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL-SLSIPDGETHIELDS 208
+ +I+ A+ YLH R I+YRD+K N+L + + KL D+ + + G+T
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSX 169
Query: 209 VVGTTGFIAPENFTTLINE----QCDVYGFGAFLFELLTAQEVSDHVS 252
GT +IAPE L E D + G +FE++ + D V
Sbjct: 170 FCGTPNYIAPE---ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVG 211
I + +LH + PI++RD+K NI + + K+ D L+ + +V+G
Sbjct: 138 ILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIG 192
Query: 212 TTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQ 245
T F APE + +E DVY FG E T++
Sbjct: 193 TPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A +A+L S+ ++RD+ NIL K+ DF L+ I + ++ +
Sbjct: 154 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 213 TGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH--YEENVKRLSG 268
++APE+ F + + DV+ +G FL+EL + + +S+F+ +E + LS
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ EM D + C D P RPT KQ+ Q+
Sbjct: 271 EHAP-AEMYD-----------------------IMKTCWDADPLKRPTF----KQIVQL 301
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 158 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 260
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 261 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 312
Query: 321 AKQLRQ 326
+++
Sbjct: 313 ISSIKE 318
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 148 KVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL--FDFSLSLSIPDGETHIE 205
K I + + + H S I++RD+KP NIL ++ KL F F+ +L+ P GE +
Sbjct: 128 KYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVY-- 181
Query: 206 LDSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV 247
D V T + APE + + DV+ G + E+ + +
Sbjct: 182 -DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+A +A+L S+ ++RD+ NIL K+ DF L+ I + ++ +
Sbjct: 177 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 213 TGFIAPEN-FTTLINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH--YEENVKRLSG 268
++APE+ F + + DV+ +G FL+EL + + +S+F+ +E + LS
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM 327
++ EM D + C D P RPT KQ+ Q+
Sbjct: 294 EHAP-AEMYD-----------------------IMKTCWDADPLKRPTF----KQIVQL 324
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 33/235 (14%)
Query: 98 INH--IVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDI 153
+NH IV +S + + + I+ E + G L R +L++ D L VA DI
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVV 210
A YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 151 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 211 GTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
++ PE F + + D + FG L+E+ + ++ + S+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------S 251
Query: 270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
N E V S D C G ++ +T QC PEDRP + +++
Sbjct: 252 NQEVLEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 300
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
LS ++L +A +A +AYL R V+RD+ N L E K+ DF LS +I
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 201 ETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + ++ PE+ F + DV+ +G L+E+ +
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++M+ + A + ++ + + + H+ +L+ +
Sbjct: 62 FGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 121
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 122 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 174
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 232
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 233 QSDVWSYGVTVWELMT 248
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 47/272 (17%)
Query: 67 FRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLIVFESVQIGTL 126
+ L G+ +K+ + + G Q + ++I+ + K+ +I+ E ++ G L
Sbjct: 78 IKTLKAGYTEKQRVDFLGEAGIMGQFSH----HNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 127 ADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA 186
D+ + F L L L+ IA + YL + V+RD+ NIL N
Sbjct: 134 -DKFLREKDGEFSVLQLVGMLR---GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVC 186
Query: 187 KLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TLINEQCDVYGFGAFLF 239
K+ DF LS + D + ++ T+G + APE + DV+ FG ++
Sbjct: 187 KVSDFGLSRVLED-----DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 241
Query: 240 ELLTAQEVSDHVSFESRFHYE-ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQA 298
E++T E R ++E N + + N F+ + C A
Sbjct: 242 EVMTYGE---------RPYWELSNHEVMKAINDGFR------LPTPMDCP--------SA 278
Query: 299 FKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
QL +QC RP D+ L ++ R+
Sbjct: 279 IYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 48/193 (24%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILF--------NEQSDAK-----LFDFSLSLSIPD 199
IA VA+LH S I++RD+KP NIL ++Q+ A+ + DF L +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 200 GETHIE--LDSVVGTTGFIAP----ENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSF 253
G+ L++ GT+G+ AP E+ + D++ G + +L+ + H F
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK---H-PF 254
Query: 254 ESRFHYEENVKR----LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDF 309
++ E N+ R L C + D+S + L Q +D
Sbjct: 255 GDKYSRESNIIRGIFSLDEMKC----------LHDRSLIAEATD--------LISQMIDH 296
Query: 310 SPEDRPTMVDVAK 322
P RPT + V +
Sbjct: 297 DPLKRPTAMKVLR 309
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE + GT +IAPE + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLCGTPNYIAPEVLSKKGH 192
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGK 212
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 44/193 (22%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILF--------NEQSDAK-----LFDFSLSLSIPD 199
IA VA+LH S I++RD+KP NIL ++Q+ A+ + DF L +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 200 GETHIE--LDSVVGTTGFIAPE------NFTT--LINEQCDVYGFGAFLFELLTAQEVSD 249
G++ L++ GT+G+ APE N T + D++ G + +L+ +
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK--- 237
Query: 250 HVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDF 309
H F ++ E N+ R I C + L Q +D
Sbjct: 238 H-PFGDKYSRESNIIR--------------GIFSLDEMKCLHDRSLIAEATDLISQMIDH 282
Query: 310 SPEDRPTMVDVAK 322
P RPT + V +
Sbjct: 283 DPLKRPTAMKVLR 295
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 33/235 (14%)
Query: 98 INH--IVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDI 153
+NH IV +S + + + I+ E + G L R +L++ D L VA DI
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVV 210
A YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 165 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 211 GTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ 269
++ PE F + + D + FG L+E+ + ++ + S+ + E
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSKSNQE--------- 268
Query: 270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 269 ---VLEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 314
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + K+ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE + GT +IAPE + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLCGTPNYIAPEVLSKKGH 216
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 217 SFEVDVWSIGCIMYTLLVGK 236
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 181 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 281
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 282 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 326
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 48/193 (24%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILF--------NEQSDAK-----LFDFSLSLSIPD 199
IA VA+LH S I++RD+KP NIL ++Q+ A+ + DF L +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 200 GETHIE--LDSVVGTTGFIAP----ENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSF 253
G+ L++ GT+G+ AP E+ + D++ G + +L+ + H F
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK---H-PF 254
Query: 254 ESRFHYEENVKR----LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDF 309
++ E N+ R L C + D+S + L Q +D
Sbjct: 255 GDKYSRESNIIRGIFSLDEMKC----------LHDRSLIAEATD--------LISQMIDH 296
Query: 310 SPEDRPTMVDVAK 322
P RPT + V +
Sbjct: 297 DPLKRPTAMKVLR 309
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTT 213
+ Y+H S +++RD+KP+N+L NE + K+ DF ++ L E + V T
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 214 GFIAPENFTTL--INEQCDVYGFGAFLFELLTAQEV 247
+ APE +L + D++ G E+L +++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIP-DGETHIELDSVVGTTGFIAPENFTTLIN 226
+++RD+K N+ NE + K+ DF L+ + DGE + GT +IAPE + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLCGTPNYIAPEVLSKKGH 218
Query: 227 E-QCDVYGFGAFLFELLTAQ 245
+ DV+ G ++ LL +
Sbjct: 219 SFEVDVWSIGCIMYTLLVGK 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N++ ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 121 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + +++PE+ + DV+ FG L+E+ T E
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 223
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 224 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLLELMRMCWQYNPKMRPSFLEI 275
Query: 321 AKQLRQ 326
+++
Sbjct: 276 ISSIKE 281
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 225
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 277
Query: 321 AKQLRQ 326
+++
Sbjct: 278 ISSIKE 283
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ YLH F R I +RD+K NIL N + AKL DF ++ + D + + V+GT +
Sbjct: 137 GLEYLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFW 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFEL 241
+APE + N D++ G E+
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEM 218
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 42 RIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALE 95
RI ELR + ++ F +YKG W K +++ N + A +
Sbjct: 12 RILKETELR-------KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK 64
Query: 96 WCINHIVYASRMSHKHIIKLI---VFESVQI-------GTLADRIHHHCEQHFEALSLTD 145
++ + + ++ +L+ + +VQ+ G L D H ++ L D
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLD----HVRENRGRLGSQD 120
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L M IA ++YL +V+RD+ N+L + K+ DF L+ + ET
Sbjct: 121 LLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 206 LDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
D ++A E+ Q DV+ +G ++EL+T
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
E ++ D + +A + YL S+ ++RD+ N+L E + ++ DF L+ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 199 DGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
+ + + + + ++APE F + Q DV+ FG ++E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTT 213
+ Y+H S +++RD+KP+N+L NE + K+ DF ++ L E + V T
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 214 GFIAPENFTTL--INEQCDVYGFGAFLFELLTAQEV 247
+ APE +L + D++ G E+L +++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 161 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 261
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 262 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 306
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++APE + N+ D + G ++++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 127 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 229
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 230 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 281
Query: 321 AKQLRQ 326
+++
Sbjct: 282 ISSIKE 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 232
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 284
Query: 321 AKQLRQ 326
+++
Sbjct: 285 ISSIKE 290
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 171 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 271
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 272 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 316
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 231
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 283
Query: 321 AKQLRQ 326
+++
Sbjct: 284 ISSIKE 289
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 155 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 255
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 256 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 300
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 126 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 228
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 229 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 280
Query: 321 AKQLRQ 326
+++
Sbjct: 281 ISSIKE 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 25/192 (13%)
Query: 67 FRKLYKGFWQKRSI-SLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI--------- 116
F K+YK ++ S+ + K +++ LE + I + H +I+KL+
Sbjct: 50 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 109
Query: 117 -VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
+ G D + E+ + K +D A+ YLH I++RD+K
Sbjct: 110 WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLH---DNKIIHRDLKA 163
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINE------QC 229
NILF D KL DF +S + D +GT ++APE ++ +
Sbjct: 164 GNILFTLDGDIKLADFGVSAK--NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 230 DVYGFGAFLFEL 241
DV+ G L E+
Sbjct: 222 DVWSLGITLIEM 233
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
LIV E + G L RI +Q F ++ +K I A+ YLH S I +RD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQYLH---SINIAHRDVK 144
Query: 175 PTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDV 231
P N+L+ + KL DF GF A E ++ CD+
Sbjct: 145 PENLLYTSKRPNAILKLTDF----------------------GF-AKETTGEKYDKSCDM 181
Query: 232 YGFGAFLFELLTA 244
+ G ++ LL
Sbjct: 182 WSLGVIMYILLCG 194
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 231
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 283
Query: 321 AKQLRQ 326
+++
Sbjct: 284 ISSIKE 289
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 146 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ + E
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSKSNQE------------V 246
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 247 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 291
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 154 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ + E
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSKSNQE------------V 254
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 255 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 299
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 169 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 269
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 270 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 314
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-T 223
I++RD+KP +L + ++ KL F +++ + GE+ + VGT F+APE
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKRE 210
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ DV+G G LF LL+
Sbjct: 211 PYGKPVDVWGCGVILFILLSG 231
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 154 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ + E
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSKSNQE------------V 254
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 255 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 299
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 155 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 255
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 256 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + +++PE+ + DV+ FG L+E+ T E
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 232
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 284
Query: 321 AKQLRQ 326
+++
Sbjct: 285 ISSIKE 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYL-HVGFSRPIVYRDM 173
+IV E ++ G L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 120 MIVIEFMENGALDAFLRKH-DGQFTVIQLVGMLR---GIAAGMRYLADMGY----VHRDL 171
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS I D + ++V TTG P +T
Sbjct: 172 AARNILVNSNLVCKVSDFGLSRVIED-----DPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 227 EQCDVYGFGAFLFELLTAQE 246
DV+ +G ++E+++ E
Sbjct: 227 SASDVWSYGIVMWEVMSYGE 246
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSV 209
I A+ Y H I++RD+KP +L + ++ KL F +++ + GE+ +
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGR 193
Query: 210 VGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTA 244
VGT F+APE + DV+G G LF LL+
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 52/197 (26%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILF--------NEQSDAK-----LFDFSLSLSIPD 199
IA VA+LH S I++RD+KP NIL ++Q+ A+ + DF L +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 200 GETHIE--LDSVVGTTGFIAPE------NFTT--LINEQCDVYGFGAFLFELLTAQEVSD 249
G+ L++ GT+G+ APE N T + D++ G + +L+ +
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK--- 237
Query: 250 HVSFESRFHYEENVKR----LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQ 305
H F ++ E N+ R L C + D+S + L Q
Sbjct: 238 H-PFGDKYSRESNIIRGIFSLDEMKC----------LHDRSLIAEATD--------LISQ 278
Query: 306 CMDFSPEDRPTMVDVAK 322
+D P RPT + V +
Sbjct: 279 MIDHDPLKRPTAMKVLR 295
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS 194
E+ L+ D L A +A + +L + V+RD+ N+L K+ DF L+
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 195 LSIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLT 243
I ++ + ++APE+ F + + DV+ +G L+E+ +
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + L LK ++D+ A+ YL V+RD+
Sbjct: 83 IVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAA 136
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +E + AK+ DF L+ E D+ + APE + + DV+ F
Sbjct: 137 RNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 235 GAFLFEL 241
G L+E+
Sbjct: 192 GILLWEI 198
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 238
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 290
Query: 321 AKQLRQ 326
+++
Sbjct: 291 ISSIKE 296
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T+ + V T +
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVVTRYY 189
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + EL+ + +DH+
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N + E K+ DF ++ I + +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 238
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEI 290
Query: 321 AKQLRQ 326
+++
Sbjct: 291 ISSIKE 296
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 172 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ + E
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSKSNQE------------V 272
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 273 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 317
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 139 EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP 198
+ L + + + ++I A++YLH S +VY D+KP NI+ E+ KL D I
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRI- 231
Query: 199 DGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFEL 241
+ GT GF APE T D+Y G L L
Sbjct: 232 -----NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAAL 269
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 169 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 269
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 270 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 314
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EY 160
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 253 FESRFH 258
R +
Sbjct: 221 QGLRLY 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 107 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EY 159
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
SL+ +++A +IA +AYL+ + V+RD+ N E K+ DF ++ I + +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + +++PE+ + DV+ FG L+E+ T E
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-------------- 225
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + M ++ DK C +L C ++P+ RP+ +++
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLL--DKPDNCP------DMLLELMRMCWQYNPKMRPSFLEI 277
Query: 321 AKQLRQ 326
+++
Sbjct: 278 ISSIKE 283
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLAD--RIHHHCEQHFEALSLTDRLKVAMDIAHAV 157
+IV +S + + + I+ E + G L R +L++ D L VA DIA
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 158 AYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSLSIPDGETHIELDSVVGTTG 214
YL ++RD+ N L AK+ DF ++ I + + +
Sbjct: 195 QYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 215 FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF 273
++ PE F + + D + FG L+E+ + ++ + S+ N
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----GYMPYPSK------------SNQEV 295
Query: 274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL 324
E V S D C G ++ +T QC PEDRP + +++
Sbjct: 296 LEFVTSGGRMDPPKNCPGP-----VYRIMT-QCWQHQPEDRPNFAIILERI 340
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 103 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EY 155
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQ---SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TT 223
IV+RD+KP N+L + + KL DF L++ + GE GT G+++PE
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWF-GFAGTPGYLSPEVLRKD 208
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ D++ G L+ LL
Sbjct: 209 PYGKPVDIWACGVILYILLVG 229
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT +APE + N+ D + G ++E+
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + L LK ++D+ A+ YL V+RD+
Sbjct: 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAA 145
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +E + AK+ DF L+ E D+ + APE + + DV+ F
Sbjct: 146 RNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 235 GAFLFELLT 243
G L+E+ +
Sbjct: 201 GILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + L LK ++D+ A+ YL V+RD+
Sbjct: 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAA 130
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +E + AK+ DF L+ E D+ + APE + + DV+ F
Sbjct: 131 RNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 235 GAFLFEL 241
G L+E+
Sbjct: 186 GILLWEI 192
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQ---SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TT 223
+V+RD+KP N+L + + KL DF L++ + +GE GT G+++PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWF-GFAGTPGYLSPEVLRKD 199
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ D++ G L+ LL
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I + +
Sbjct: 127 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + ++APE+ + D++ FG L+E+ + E
Sbjct: 184 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 229
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P+ RPT +++
Sbjct: 230 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEI 281
Query: 321 AKQLR 325
L+
Sbjct: 282 VNLLK 286
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP 175
IV E + G+L D + L LK ++D+ A+ YL V+RD+
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAA 317
Query: 176 TNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TTLINEQCDVYGF 234
N+L +E + AK+ DF L+ E D+ + APE + + DV+ F
Sbjct: 318 RNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 235 GAFLFELLT 243
G L+E+ +
Sbjct: 373 GILLWEIYS 381
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 114 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EY 166
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
Query: 253 FESRFH 258
R +
Sbjct: 227 QGLRLY 232
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE---- 175
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 253 FESRFH 258
R +
Sbjct: 236 QGLRLY 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV 209
A I YLH S ++YRD+KP N+L ++Q ++ DF + + G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW----XL 198
Query: 210 VGTTGFIAPE-NFTTLINEQCDVYGFGAFLFELLTA 244
GT ++AP + N+ D + G ++E+
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I + +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + ++APE+ + D++ FG L+E+ + E
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 230
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P+ RPT +++
Sbjct: 231 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 321 AKQLR 325
L+
Sbjct: 283 VNLLK 287
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TT 223
IV+RD+KP N+L +S KL DF L++ + G+ GT G+++PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWF-GFAGTPGYLSPEVLRKD 181
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ D++ G L+ LL
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EY 175
Query: 207 DSVVGT---TGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVS 252
S VG+ + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 253 FESRFH 258
R +
Sbjct: 236 QGLRLY 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I + +
Sbjct: 125 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + ++APE+ + D++ FG L+E+ + E
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 227
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P+ RPT +++
Sbjct: 228 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEI 279
Query: 321 AKQLR 325
L+
Sbjct: 280 VNLLK 284
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQSDA---KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TT 223
IV+RD+KP N+L +S KL DF L++ + G+ GT G+++PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWF-GFAGTPGYLSPEVLRKD 181
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ D++ G L+ LL
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 152 DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG 211
+I A+ +LH I+YRD+K NIL + L DF LS ET D G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCG 222
Query: 212 TTGFIAPE---NFTTLINEQCDVYGFGAFLFELLTA 244
T ++AP+ + ++ D + G ++ELLT
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I + +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + ++APE+ + D++ FG L+E+ + E
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 230
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P+ RPT +++
Sbjct: 231 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 321 AKQLR 325
L+
Sbjct: 283 VNLLK 287
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 105 SRMSHKHIIK-----------LIVFESVQIGTLADRIHHHC-----------EQHFEALS 142
+ + H+HI+K ++VFE ++ G L + H Q L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 143 LTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGET 202
L+ L +A IA + YL S+ V+RD+ N L K+ DF +S + +
Sbjct: 132 LSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 203 HIELDSVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLT 243
+ + ++ PE+ FTT + DV+ FG L+E+ T
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTT----ESDVWSFGVILWEIFT 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
IA +AY+ + ++RD++ N+L +E K+ DF L+ I D E + +
Sbjct: 119 IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFP 174
Query: 213 TGFIAPENFTTLINEQC-----DVYGFGAFLFELLTAQEVS 248
+ APE IN C DV+ FG L+E++T ++
Sbjct: 175 IKWTAPEA----INFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +GF V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGF----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 93 MIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 144
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 200 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 245
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 246 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 168 IVYRDMKPTNILFNEQ---SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF-TT 223
+V+RD+KP N+L + + KL DF L++ + G+ GT G+++PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWF-GFAGTPGYLSPEVLRKE 181
Query: 224 LINEQCDVYGFGAFLFELLTA 244
+ D++ G L+ LL
Sbjct: 182 AYGKPVDIWACGVILYILLVG 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I + +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + ++APE+ + D++ FG L+E+ + E
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 230
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P RPT +++
Sbjct: 231 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEI 282
Query: 321 AKQLR 325
L+
Sbjct: 283 VNLLK 287
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +I +++LH +++RD+K N+L E ++ KL DF +S + T ++
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNT 188
Query: 209 VVGTTGFIAPENFTTLINEQCDVYGFGAFLFEL-LTAQEVSD 249
+GT ++APE N Y F + L+ L +TA E+++
Sbjct: 189 FIGTPYWMAPEVIACDENPDA-TYDFKSDLWSLGITAIEMAE 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ + K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ + K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVV 210
I + YLH S I++RD+ +N+L + K+ DF L+ L +P E H L
Sbjct: 121 IITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-EKHYTL---C 173
Query: 211 GTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSD 249
GT +I+PE T + + DV+ G + LL + D
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 39/177 (22%)
Query: 97 CINHIVYASRMSHKHIIKL-----------IVFESVQ--IGTLADRIHHHCEQHFEALSL 143
I I + H +I+KL +VFE + + L D CE E+++
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV----CEGGLESVTA 102
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPDGE 201
L + + + +AY H R +++RD+KP N+L N + + K+ DF L + IP +
Sbjct: 103 KSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 202 THIELDSVVGTTGFIAPE------NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
E V T + AP+ ++T I D++ G E++ + VS
Sbjct: 157 YTHE----VVTLWYRAPDVLMGSKKYSTTI----DIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 39/177 (22%)
Query: 97 CINHIVYASRMSHKHIIKL-----------IVFESVQ--IGTLADRIHHHCEQHFEALSL 143
I I + H +I+KL +VFE + + L D CE E+++
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV----CEGGLESVTA 102
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPDGE 201
L + + + +AY H R +++RD+KP N+L N + + K+ DF L + IP +
Sbjct: 103 KSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156
Query: 202 THIELDSVVGTTGFIAPE------NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
E V T + AP+ ++T I D++ G E++ + VS
Sbjct: 157 YTHE----VVTLWYRAPDVLMGSKKYSTTI----DIWSVGCIFAEMVNGAPLFPGVS 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+RD+ N + K+ DF ++ I +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + ++APE+ + D++ FG L+E+ + E
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 230
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P+ RPT +++
Sbjct: 231 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 321 AKQLR 325
L+
Sbjct: 283 VNLLK 287
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 29 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 88
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 89 TSTVQLIMQLMPFGXLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 141
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 199
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 200 QSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 29 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 88
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 89 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 141
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 199
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 200 QSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 31 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 90
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 91 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 143
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 201
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 202 QSDVWSYGVTVWELMT 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 35 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 94
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 95 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 147
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 205
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 206 QSDVWSYGVTVWELMT 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ + K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 30 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 89
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 90 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 142
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 200
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 32 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 91
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 92 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 144
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 202
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 203 QSDVWSYGVTVWELMT 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ + K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 93 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 144
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 200 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 245
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 246 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 109 HKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPI 168
H HI IVFE + + T D I E F L K+A I +V +LH S +
Sbjct: 89 HGHIC--IVFELLGLSTY-DFIK---ENGFLPFRLDHIRKMAYQICKSVNFLH---SNKL 139
Query: 169 VYRDMKPTNILFNEQ-------------------SDAKLFDFSLSLSIPDGETHIELDSV 209
+ D+KP NILF + D K+ DF + D E H ++
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHH---STL 194
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFE 240
V T + APE L ++ CDV+ G L E
Sbjct: 195 VSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 97 CINHIVYASRMSHKHIIKL-----------IVFESVQ--IGTLADRIHHHCEQHFEALSL 143
I I + H +I+KL +VFE + + L D CE E+++
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV----CEGGLESVTA 102
Query: 144 TDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIP 198
L + + + +AY H R +++RD+KP N+L N + + K+ DF L + IP
Sbjct: 103 KSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 110 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 161
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 162 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 216
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 217 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 262
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 263 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 45/203 (22%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI--- 197
LS LK+ AV ++H PI++RD+K N+L + Q KL DF + +I
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 198 PDGETHIELDSVV-------GTTGFIAPE------NFTTLINEQCDVYGFGAFLFELLTA 244
PD + ++V T + PE NF I E+ D++ G L+ L
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP--IGEKQDIWALGCILYLLCFR 249
Query: 245 QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTL 304
Q H E+ +L N ++ SI D Q F L
Sbjct: 250 Q------------HPFEDGAKLRIVNGKY-----SIPPHDT---------QYTVFHSLIR 283
Query: 305 QCMDFSPEDRPTMVDVAKQLRQM 327
+ +PE+R ++ +V QL+++
Sbjct: 284 AMLQVNPEERLSIAEVVHQLQEI 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 120 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 171
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 172 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 227 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 272
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 273 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ + K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 26/116 (22%)
Query: 150 AMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE---- 205
++ HA Y H RD+KPTNIL ++ L D S+ H+E
Sbjct: 146 GLEAIHAKGYAH---------RDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQ 193
Query: 206 ------LDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHV 251
+ T + APE F+ +I+E+ DV+ G L+ ++ + D V
Sbjct: 194 ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 38 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 97
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 98 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 150
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 208
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 209 QSDVWSYGVTVWELMT 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYR 171
+ +IV E ++ G+L + H Q F + L L+ + + YL +G+ V+R
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR---GVGAGMRYLSDLGY----VHR 175
Query: 172 DMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TL 224
D+ N+L + K+ DF LS + D + D+ TTG + APE
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLED-----DPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 225 INEQCDVYGFGAFLFELLTAQE 246
+ DV+ FG ++E+L E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGE 252
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L++ D+ A+ YL S+ ++RD+ N L N+Q K+ DF LS + D E
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR 164
Query: 207 DSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFEL----------LTAQEVSDHVSFES 255
S + PE + + + D++ FG ++E+ T E ++H++
Sbjct: 165 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 256 RFH 258
R +
Sbjct: 224 RLY 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLITQLMPFGXLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 31 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 90
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 91 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 143
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 201
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 202 QSDVWSYGVTVWELMT 217
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 105 SRMSHKHIIKLIVFESVQIG-----TLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAY 159
SR + I +++ ++ G LA RI E F L L ++ +DIA + Y
Sbjct: 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIG---ENPFN-LPLQTLVRFMVDIACGMEY 152
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
L SR ++RD+ N + E + DF LS I G+ + + + ++A E
Sbjct: 153 LS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209
Query: 220 NFT-TLINEQCDVYGFGAFLFELLT 243
+ L DV+ FG ++E++T
Sbjct: 210 SLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 30 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 89
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 90 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 142
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 200
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 34 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 93
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 94 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 146
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 204
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 205 QSDVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 31 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 90
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 91 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 143
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 201
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 202 QSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 35 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 94
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 95 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 147
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 205
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 206 QSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 35 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 94
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 95 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 147
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 205
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 206 QSDVWSYGVTVWELMT 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 25 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 84
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 85 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVH 137
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 195
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 196 QSDVWSYGVTVWELMT 211
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 31 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 90
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 91 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 143
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 201
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 202 QSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 53 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 112
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 113 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 165
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 223
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 224 QSDVWSYGVTVWELMT 239
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 113 IKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYR 171
+ +IV E ++ G+L + H Q F + L L+ + + YL +G+ V+R
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR---GVGAGMRYLSDLGY----VHR 175
Query: 172 DMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TL 224
D+ N+L + K+ DF LS + D + D+ TTG + APE
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVLED-----DPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 225 INEQCDVYGFGAFLFELLTAQE 246
+ DV+ FG ++E+L E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGE 252
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 22 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 81
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 82 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 134
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF L+ L + E H E V ++A E+ I
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 192
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 193 QSDVWSYGVTVWELMT 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI---------PDGETHIEL 206
AV LH +++RD+KP+N+L N D K+ DF L+ I P G+ +
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS-GM 179
Query: 207 DSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV 247
V T + APE T + DV+ G L EL + +
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 192
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ + ++ +Y+H + I +RD+KP+NIL ++ KL DF GE+ +D
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDF--------GESEYMVDK 205
Query: 209 VV----GTTGFIAPENF---TTLINEQCDVYGFGAFLF 239
+ GT F+ PE F ++ + D++ G L+
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI---------PDGETHIEL 206
AV LH +++RD+KP+N+L N D K+ DF L+ I P G+ +
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS-GM 179
Query: 207 DSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV 247
V T + APE T + DV+ G L EL + +
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 106 RMSHKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIA 154
++SH ++K IV E + G L + + H + L + L++ D+
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL----RSHGKGLEPSQLLEMCYDVC 114
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT-- 212
+A+L S ++RD+ N L + K+ DF ++ + D + S VGT
Sbjct: 115 EGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD----QYVSSVGTKF 167
Query: 213 -TGFIAPENFTTL-INEQCDVYGFGAFLFELLT 243
+ APE F + + DV+ FG ++E+ +
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T ++ V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEPEVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 118 FESVQIGTLADRIHHHCEQH-FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT 176
F+ + I A + + EQ F L L + + + +A+LH S IV+RD+KP
Sbjct: 92 FQYIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLH---SLNIVHRDLKPH 147
Query: 177 NILFNEQS-----DAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPENFTTLINEQC- 229
NIL + + A + DF L + G S V GT G+IAPE +++E C
Sbjct: 148 NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE----MLSEDCK 203
Query: 230 -------DVYGFGAFLFELLT 243
D++ G + +++
Sbjct: 204 ENPTYTVDIFSAGCVFYYVIS 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
L + + IA +A++ R ++RD++ NIL + K+ DF L+ I D E
Sbjct: 109 PLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
Query: 202 THIELDSVVGTTGFIAPE--NFTTLINEQCDVYGFGAFLFELLT 243
+ + + APE NF + + DV+ FG L E++T
Sbjct: 166 -YTAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVT 207
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 143 LTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGET 202
L + + IA +A++ R ++RD++ NIL + K+ DF L+ I D E
Sbjct: 283 LPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 338
Query: 203 HIELDSVVGTTGFIAPE--NFTTLINEQCDVYGFGAFLFELLT 243
+ + + APE NF + + DV+ FG L E++T
Sbjct: 339 YTAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVT 380
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 47/226 (20%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+IV E ++ G+L + H + F + L L+ IA + YL V+RD+
Sbjct: 122 MIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLS---DMGAVHRDLA 174
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------INE 227
NIL N K+ DF LS + D + ++ T G P +T+
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIED 284
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 230 ASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD------ 274
Query: 285 KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 --CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 105 SRMSHKHIIK-----------LIVFESVQIGTLADRIHHHCEQHF--------EALSLTD 145
+ + H+HI+K ++VFE ++ G L + H L+ +
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L +A IA + YL S+ V+RD+ N L E K+ DF +S + + +
Sbjct: 130 MLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 206 LDSVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLT 243
+ ++ PE+ FTT + DV+ G L+E+ T
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTT----ESDVWSLGVVLWEIFT 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+R++ N + K+ DF ++ I + +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + ++APE+ + D++ FG L+E+ + E
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 230
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P RPT +++
Sbjct: 231 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEI 282
Query: 321 AKQLR 325
L+
Sbjct: 283 VNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
+L + +++A +IA +AYL+ ++ V+R++ N + K+ DF ++ I + +
Sbjct: 129 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Query: 202 THIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE 260
+ + + ++APE+ + D++ FG L+E+ + E
Sbjct: 186 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-------------- 231
Query: 261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV 320
+ + LS + K ++D + D+ C + L C F+P RPT +++
Sbjct: 232 QPYQGLSNEQV-LKFVMDGGYL-DQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEI 283
Query: 321 AKQLR 325
L+
Sbjct: 284 VNLLK 288
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 16/94 (17%)
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK-----L 188
C++ F +L L +A+ + + Y+H S+ ++YRD+KP N L Q + K +
Sbjct: 90 CDRTF---TLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPENFLIGRQGNKKEHVIHI 143
Query: 189 FDFSLSLSIPDGET--HI---ELDSVVGTTGFIA 217
DF L+ D ET HI E S+ GT +++
Sbjct: 144 IDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 177
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMVPFVVTRYY 193
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF L+ + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLARVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 192
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI---------PDGETHIEL 206
AV LH +++RD+KP+N+L N D K+ DF L+ I P G+ +
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS-GM 179
Query: 207 DSVVGTTGFIAPENFTTLI--NEQCDVYGFGAFLFELLTAQEV 247
V T + APE T + DV+ G L EL + +
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 190
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 192
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPEVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + E D++ G + E++ + +DH+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 185
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG 214
+ YLH + I++RD+KP N+L +E KL DF L+ S G + V T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRW 177
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELL 242
+ APE + D++ G L ELL
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 38/199 (19%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGE 201
++ D + + +A + YL + V+RD+ N + +E K+ DF L+ I D E
Sbjct: 122 TVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178
Query: 202 THIELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLT-AQEVSDHVSF 253
+ SV P +T L + DV+ FG L+ELLT H+
Sbjct: 179 YY----SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
Query: 254 ESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPED 313
H+ +RL + + C + Q+ QC + P
Sbjct: 235 FDLTHFLAQGRRLP---------------QPEYCP--------DSLYQVMQQCWEADPAV 271
Query: 314 RPTMVDVAKQLRQMYRSCM 332
RPT + ++ Q+ + +
Sbjct: 272 RPTFRVLVGEVEQIVSALL 290
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 103/277 (37%), Gaps = 54/277 (19%)
Query: 77 KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------------IVFES 120
K ++ MK + N +Q +E ++ SH ++I+L ++
Sbjct: 64 KVAVKTMKLD-NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 121 VQIGTL-ADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNIL 179
++ G L ++ E + + L LK +DIA + YL +R ++RD+ N +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCM 179
Query: 180 FNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLI-NEQCDVYGFGAFL 238
+ + DF LS I G+ + + +IA E+ + + DV+ FG +
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 239 FELLTA-----QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKE 293
+E+ T V +H ++ H R K+ E
Sbjct: 240 WEIATRGMTPYPGVQNHEMYDYLLH-----------GHRLKQ----------------PE 272
Query: 294 QQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
L ++ C P DRPT + QL ++ S
Sbjct: 273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 184
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 185
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
IA +AY+ + ++RD++ N+L +E K+ DF L+ I D E + +
Sbjct: 118 IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFP 173
Query: 213 TGFIAPENFTTLINEQC-----DVYGFGAFLFELLTAQEV 247
+ APE IN C +V+ FG L+E++T ++
Sbjct: 174 IKWTAPEA----INFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYY 184
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 229
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVG 211
+ ++AY+H S I +RD+KP N+L + S KL DF + + GE ++ S +
Sbjct: 150 LLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SXIC 203
Query: 212 TTGFIAPE------NFTTLINEQCDVYGFGAFLFELLTAQEV 247
+ + APE N+TT I D++ G + EL+ Q +
Sbjct: 204 SRYYRAPELIFGATNYTTNI----DIWSTGCVMAELMQGQPL 241
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILF----NEQSDAKLFDFSLS-LSIPDGETHIELD 207
I + YLH + +++RD+KP NIL E+ K+ D + L + +LD
Sbjct: 137 ILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 208 SVVGTTGFIAPENFTTL--INEQCDVYGFGAFLFELLTAQEV 247
VV T + APE + D++ G ELLT++ +
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 235
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T ++ V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEPEVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF--TTLI 225
I++RD+KP N+L N++ KL DF L+ + G S V T + AP+ +
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 226 NEQCDVYGFGAFLFELLTAQEV 247
+ D++ G L E++T + +
Sbjct: 187 STSIDIWSCGCILAEMITGKPL 208
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 229
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 49/227 (21%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLH-VGFSRPIVYRDM 173
+IV E ++ G+L + H + F + L L+ IA + YL +G+ V+RD+
Sbjct: 122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDL 173
Query: 174 KPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-------IN 226
NIL N K+ DF L + D + ++ T G P +T+
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLED-----DPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 227 EQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIE 283
DV+ +G L+E++ S+ R ++E ++V + + R +D
Sbjct: 229 SASDVWSYGIVLWEVM---------SYGERPYWEMSNQDVIKAVDEGYRLPPPMD----- 274
Query: 284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C A QL L C +RP + L ++ R+
Sbjct: 275 ---CPA--------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 35/220 (15%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E G L H E + +++ ++ ++ + YL + V+RD+
Sbjct: 85 MLVMEMAGGGPL----HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLA 137
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV-VGTTGFIAPE--NFTTLINEQCDV 231
N+L + AK+ DF LS ++ +++ S + APE NF + + DV
Sbjct: 138 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF-SSRSDV 196
Query: 232 YGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG 291
+ +G ++E L+ + ++ K++ G V + I + K C
Sbjct: 197 WSYGVTMWEALS--------------YGQKPYKKMKGPE------VMAFIEQGKRMECPP 236
Query: 292 K-EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
+ +L A L C + EDRP + V +++R Y S
Sbjct: 237 ECPPELYA---LMSDCWIYKWEDRPDFLTVEQRMRACYYS 273
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 196
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 41/234 (17%)
Query: 108 SHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
SH +I++LI V E VQ G + + L + L++ D A
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVKTLLQMVGDAAAG 225
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+ YL S+ ++RD+ N L E++ K+ DF +S DG +
Sbjct: 226 MEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 217 APENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE 275
APE + + DV+ FG L+E + LS Q R E
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLG--------------ASPYPNLSNQQTR--E 326
Query: 276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
V +K E A +L QC + P RP+ + ++L+ + +
Sbjct: 327 FV------EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T + V T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYY 185
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELL 242
APE + E D++ G + E++
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLIN 226
IV+RD+KP NIL KL DF L+ + LD VV T + APE +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEVLLQSTYA 189
Query: 227 EQCDVYGFGAFLFEL 241
D++ G E+
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 146 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 199
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD---- 190
E +F+ L +A + HA+ +LH + + D+KP NILF L++
Sbjct: 123 ENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 179
Query: 191 ------FSLSLSIPDGET----HIELDSVVGTTGFIAPENFTTLINEQ-CDVYGFGAFLF 239
+ S+ + D + H ++V T + PE L Q CDV+ G LF
Sbjct: 180 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239
Query: 240 E 240
E
Sbjct: 240 E 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 153 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 206
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 142 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 195
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 33/163 (20%)
Query: 107 MSHKHIIK-----------LIVFESVQIGTLADRIHHHC----------EQHFEALSLTD 145
+ H+HI++ L+VFE ++ G L + H + L L
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 136
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L VA +A + YL G V+RD+ N L + K+ DF +S I + +
Sbjct: 137 LLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 206 LDSVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLT 243
+ ++ PE+ FTT + DV+ FG L+E+ T
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTT----ESDVWSFGVVLWEIFT 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 138 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 191
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
LS L A D+A + YL + ++RD+ NIL E AK+ DF LS
Sbjct: 139 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---Q 192
Query: 201 ETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
E +++ ++A E+ ++ DV+ +G L+E+++
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 135 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 188
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 33/163 (20%)
Query: 107 MSHKHIIK-----------LIVFESVQIGTLADRIHHHC----------EQHFEALSLTD 145
+ H+HI++ L+VFE ++ G L + H + L L
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 130
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L VA +A + YL G V+RD+ N L + K+ DF +S I + +
Sbjct: 131 LLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 206 LDSVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLT 243
+ ++ PE+ FTT + DV+ FG L+E+ T
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTT----ESDVWSFGVVLWEIFT 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 30 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 89
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 90 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 142
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 200
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 169 VYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT--TLIN 226
++RD+KP NIL + S KL DF + + + D V T + +PE T
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY--YDDEVATRWYRSPELLVGDTQYG 181
Query: 227 EQCDVYGFGAFLFELLTA 244
DV+ G ELL+
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD---- 190
E +F+ L +A + HA+ +LH + + D+KP NILF L++
Sbjct: 114 ENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170
Query: 191 ------FSLSLSIPDGET----HIELDSVVGTTGFIAPENFTTLINEQ-CDVYGFGAFLF 239
+ S+ + D + H ++V T + PE L Q CDV+ G LF
Sbjct: 171 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
Query: 240 E 240
E
Sbjct: 231 E 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 146 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 199
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD---- 190
E +F+ L +A + HA+ +LH + + D+KP NILF L++
Sbjct: 146 ENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 202
Query: 191 ------FSLSLSIPDGET----HIELDSVVGTTGFIAPENFTTLINEQ-CDVYGFGAFLF 239
+ S+ + D + H ++V T + PE L Q CDV+ G LF
Sbjct: 203 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262
Query: 240 E 240
E
Sbjct: 263 E 263
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 168 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 221
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 147 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 200
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 33/163 (20%)
Query: 107 MSHKHIIK-----------LIVFESVQIGTLADRIHHHC----------EQHFEALSLTD 145
+ H+HI++ L+VFE ++ G L + H + L L
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 146 RLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE 205
L VA +A + YL G V+RD+ N L + K+ DF +S I + +
Sbjct: 160 LLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 206 LDSVVGTTGFIAPEN-----FTTLINEQCDVYGFGAFLFELLT 243
+ ++ PE+ FTT + DV+ FG L+E+ T
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTT----ESDVWSFGVVLWEIFT 255
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
LS L A D+A + YL + ++RD+ NIL E AK+ DF LS
Sbjct: 129 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---Q 182
Query: 201 ETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
E +++ ++A E+ ++ DV+ +G L+E+++
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 32 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 91
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 92 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 144
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 202
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 203 QSDVWSYGVTVWELMT 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 41/234 (17%)
Query: 108 SHKHIIKLI-----------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
SH +I++LI V E VQ G + + L + L++ D A
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVKTLLQMVGDAAAG 225
Query: 157 VAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFI 216
+ YL S+ ++RD+ N L E++ K+ DF +S DG +
Sbjct: 226 MEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 217 APENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE 275
APE + + DV+ FG L+E + LS Q R E
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLG--------------ASPYPNLSNQQTR--E 326
Query: 276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR 329
V +K E A +L QC + P RP+ + ++L+ + +
Sbjct: 327 FV------EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 34/152 (22%)
Query: 109 HKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPI 168
H HI IVFE + + T D I E F L K+A I +V +LH S +
Sbjct: 89 HGHIC--IVFELLGLSTY-DFIK---ENGFLPFRLDHIRKMAYQICKSVNFLH---SNKL 139
Query: 169 VYRDMKPTNILFNEQ-------------------SDAKLFDFSLSLSIPDGETHIELDSV 209
+ D+KP NILF + D K+ DF + D E H ++
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHH---STL 194
Query: 210 VGTTGFIAPENFTTL-INEQCDVYGFGAFLFE 240
V + APE L ++ CDV+ G L E
Sbjct: 195 VXXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---- 116
F +YKG W K +++ + + A + ++ + + + H+ +L+
Sbjct: 30 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 89
Query: 117 ------VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+ + + G L D + +H + + L + IA + YL R +V+
Sbjct: 90 TSTVQLIMQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 142
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 200
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 170 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 223
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 162 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 215
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 168 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 221
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 187
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 100 HIVYASRMSHKHIIKLI-VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM------D 152
I SR+ H +IIK++ +FE+ L H F + RL +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ AV YL + + I++RD+K NI+ E KL DF + + G+ + GT
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY---TFCGT 192
Query: 213 TGFIAPENF--TTLINEQCDVYGFGAFLFELL 242
+ APE + +++ G L+ L+
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 139 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 192
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 30 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 89
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 90 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 142
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 200
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 172 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 225
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTG 214
++AY+H S I +RD+KP N+L + + KL DF + + GE ++ S + +
Sbjct: 213 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRY 266
Query: 215 FIAPENF--TTLINEQCDVYGFGAFLFELLTAQEV 247
+ APE T DV+ G L ELL Q +
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 35 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 94
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 95 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 147
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 205
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 206 QSDVWSYGVTVWELMT 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF 215
+ +LH S I++RD+KP+NI+ K+ DF L+ + T+ + V T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPYVVTRYY 191
Query: 216 IAPENFTTL-INEQCDVYGFGAFLFELLTAQEV---SDHV 251
APE + D++ G + EL+ + +DH+
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHI 231
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 67 FRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKLI---V 117
F +YKG W K +++ + + A + ++ + + + H+ +L+ +
Sbjct: 28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
Query: 118 FESVQI-------GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY 170
+VQ+ G L D + +H + + L + IA + YL R +V+
Sbjct: 88 TSTVQLITQLMPFGCLLD----YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVH 140
Query: 171 RDMKPTNILFNEQSDAKLFDFSLS--LSIPDGETHIELDSVVGTTGFIAPENFTTLI-NE 227
RD+ N+L K+ DF + L + E H E V ++A E+ I
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTH 198
Query: 228 QCDVYGFGAFLFELLT 243
Q DV+ +G ++EL+T
Sbjct: 199 QSDVWSYGVTVWELMT 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 33/109 (30%)
Query: 168 IVYRDMKPTNILFNEQ-SDAKLFDFSLSLSIPDGETHIELDSVV---------------- 210
IV+RD+KP+N L+N + L DF L+ D T IEL V
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD--TKIELLKFVQSEAQQERCSQNKCSI 195
Query: 211 ------------GTTGFIAPENFTTLINEQC--DVYGFGAFLFELLTAQ 245
GT GF APE T N+ D++ G LL+ +
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 179 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 210
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VGT ++ PE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 47/242 (19%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAY 159
++++ + K +I+ E ++ G+L D + F + L L+ IA + Y
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLR---GIAAGMKY 150
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG---TTGFI 216
L V+RD+ NIL N K+ DF LS + D + S +G +
Sbjct: 151 LA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 217 APE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSG 268
APE FT+ DV+ +G ++E++ S+ R +++ ++V
Sbjct: 208 APEAIQYRKFTS----ASDVWSYGIVMWEVM---------SYGERPYWDMTNQDVINAIE 254
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
Q+ R +D C A QL L C RP + L +M
Sbjct: 255 QDYRLPPPMD--------CP--------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
Query: 329 RS 330
R+
Sbjct: 299 RN 300
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 49/242 (20%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAY 159
+I++ + K +IV E ++ G+L D + F + L L+ I+ + Y
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLR---GISAGMKY 139
Query: 160 LH-VGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG---- 214
L +G+ V+RD+ NIL N K+ DF LS + D + ++ T G
Sbjct: 140 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLED-----DPEAAYTTRGGKIP 190
Query: 215 --FIAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSG 268
+ APE DV+ +G ++E+ VS+ R ++E ++V +
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEV---------VSYGERPYWEMTNQDVIKAVE 241
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
+ R +D C A QL L C RP ++ L ++
Sbjct: 242 EGYRLPSPMD--------CPA--------ALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
Query: 329 RS 330
R+
Sbjct: 286 RN 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H + +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 209 VVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 33/104 (31%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSI-PDGETHI---------------------- 204
I++RD+KP N L N+ K+ DF L+ +I D + HI
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKK 211
Query: 205 ELDSVVGTTGFIAP------ENFTTLINEQCDVYGFGAFLFELL 242
+L S V T + AP EN+T I D++ G ELL
Sbjct: 212 QLTSHVVTRWYRAPELILLQENYTNSI----DIWSTGCIFAELL 251
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 108
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 163
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 53 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 111
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 112 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 166
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 110
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 109
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 109
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 56 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 114
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 115 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 169
Query: 209 VVGTTGFIAPENF--TTLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 108
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 56 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 114
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 115 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 169
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 110
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK-----L 188
C++ F SL L +A+ + + Y+H S+ ++YRD+KP N L + +
Sbjct: 119 CDRTF---SLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHI 172
Query: 189 FDFSLSLSIPDGET--HI---ELDSVVGTTGFIA 217
DF+L+ D ET HI E S+ GT +++
Sbjct: 173 IDFALAKEYIDPETKKHIPYREHKSLTGTARYMS 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 109
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 106
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK-----L 188
C++ F SL L +A+ + + Y+H S+ ++YRD+KP N L + +
Sbjct: 98 CDRTF---SLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHI 151
Query: 189 FDFSLSLSIPDGET--HI---ELDSVVGTTGFIA 217
DF+L+ D ET HI E S+ GT +++
Sbjct: 152 IDFALAKEYIDPETKKHIPYREHKSLTGTARYMS 185
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 54/243 (22%)
Query: 105 SRMSHKHII-----------KLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
S++SHKH++ ++V E V+ G+L + +++ +++ +L+VA +
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDT----YLKKNKNCINILWKLEVAKQL 122
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD--------AKLFDFSLSLSIPDGETHIE 205
A A+ +L +++ ++ NIL + D KL D +S+++ + E
Sbjct: 123 AWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE 179
Query: 206 LDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR 265
V P+N +N D + FG L+E+ + + K
Sbjct: 180 RIPWVPPECIENPKN----LNLATDKWSFGTTLWEICSGGD-----------------KP 218
Query: 266 LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLR 325
LS + + K ED+ K +L L CMD+ P+ RP+ + + L
Sbjct: 219 LSALDSQRKLQ----FYEDRHQLPAPKAAELA---NLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 326 QMY 328
++
Sbjct: 272 SLF 274
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 108
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 53 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 111
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 112 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 166
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 141 LSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG 200
LS L A D+A + YL + ++R++ NIL E AK+ DF LS
Sbjct: 136 LSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRG---Q 189
Query: 201 ETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
E +++ ++A E+ ++ DV+ +G L+E+++
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ + +LH S +V+RD+KP NIL KL DF L+ + L SVV T
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 182
Query: 213 TGFIAPE 219
+ APE
Sbjct: 183 LWYRAPE 189
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 108
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSL--SLSIP-DGETHIELDSVVGTTGFIAPENF--T 222
I++RD+KP N+L N KL DF L + IP TH V T + AP+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMGS 194
Query: 223 TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
+ D++ G E++T + + V+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 159 YLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAP 218
+LH S +V+RD+KP NIL KL DF L+ + L SVV T + AP
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAP 188
Query: 219 E 219
E
Sbjct: 189 E 189
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSL--SLSIP-DGETHIELDSVVGTTGFIAPENF--T 222
I++RD+KP N+L N KL DF L + IP TH V T + AP+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVLMGS 194
Query: 223 TLINEQCDVYGFGAFLFELLTAQEVSDHVS 252
+ D++ G E++T + + V+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ + +LH S +V+RD+KP NIL KL DF L+ + L SVV T
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 182
Query: 213 TGFIAPE 219
+ APE
Sbjct: 183 LWYRAPE 189
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK-----L 188
C++ F SL L +A+ + + Y+H S+ ++YRD+KP N L + +
Sbjct: 98 CDRTF---SLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHI 151
Query: 189 FDFSLSLSIPDGET--HI---ELDSVVGTTGFIA 217
DF L+ D ET HI E S+ GT +++
Sbjct: 152 IDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 185
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 54/243 (22%)
Query: 105 SRMSHKHII-----------KLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI 153
S++SHKH++ ++V E V+ G+L + +++ +++ +L+VA +
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL----DTYLKKNKNCINILWKLEVAKQL 122
Query: 154 AHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD--------AKLFDFSLSLSIPDGETHIE 205
A A+ +L +++ ++ NIL + D KL D +S+++ + E
Sbjct: 123 AAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE 179
Query: 206 LDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR 265
V P+N +N D + FG L+E+ + + K
Sbjct: 180 RIPWVPPECIENPKN----LNLATDKWSFGTTLWEICSGGD-----------------KP 218
Query: 266 LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLR 325
LS + + K ED+ K +L L CMD+ P+ RP+ + + L
Sbjct: 219 LSALDSQRKLQ----FYEDRHQLPAPKAAELA---NLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 326 QMY 328
++
Sbjct: 272 SLF 274
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 98 INHIVYASRMSHKHIIKL-IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ I + HK+I++L V S + TL + C+Q + D +D
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTL---VFEFCDQDLK--KYFDSCNGDLDPEIV 103
Query: 157 VAYL-----HVGF--SRPIVYRDMKPTNILFNEQSDAKLFDFSLS 194
++L +GF SR +++RD+KP N+L N + KL DF L+
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H + +A +LT + + +
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKS 110
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H + +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLIN 226
IV+RD+KP NIL KL DF L+ + L VV T + APE +
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPEVLLQSTYA 197
Query: 227 EQCDVYGFGAFLFEL 241
D++ G E+
Sbjct: 198 TPVDMWSVGCIFAEM 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 47/226 (20%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+I+ E ++ G+L D + F + L L+ I + YL V+RD+
Sbjct: 91 MIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSYVHRDLA 143
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TLINE 227
NIL N K+ DF +S + D + ++ T G + APE
Sbjct: 144 ARNILVNSNLVCKVSDFGMSRVLED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIED 284
DV+ +G ++E++ S+ R +++ ++V + + R +D I
Sbjct: 199 ASDVWSYGIVMWEVM---------SYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI--- 246
Query: 285 KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
A QL L C DRP + L ++ R+
Sbjct: 247 -------------ALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLIN 226
IV+RD+KP NIL KL DF L+ + L VV T + APE +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEVLLQSTYA 189
Query: 227 EQCDVYGFGAFLFEL 241
D++ G E+
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + T + DS VG ++ PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 47/226 (20%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+I+ E ++ G+L D + F + L L+ I + YL V+RD+
Sbjct: 85 MIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSYVHRDLA 137
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TLINE 227
NIL N K+ DF +S + D + ++ T G + APE
Sbjct: 138 ARNILVNSNLVCKVSDFGMSRVLED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIED 284
DV+ +G ++E++ S+ R +++ ++V + + R +D I
Sbjct: 193 ASDVWSYGIVMWEVM---------SYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI--- 240
Query: 285 KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
A QL L C DRP + L ++ R+
Sbjct: 241 -------------ALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM---DIAHAVAYLHVGFSRPIVYRDM 173
++ +V + + D +H C ++ + + + + ++ LH+ S + +RD+
Sbjct: 99 IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDI 157
Query: 174 KPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE------NFTTLIN 226
KP N+L NE KL DF + + E ++ + + + + APE ++TT +
Sbjct: 158 KPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQHYTTAV- 213
Query: 227 EQCDVYGFGAFLFELLTAQEV 247
D++ G E++ + +
Sbjct: 214 ---DIWSVGCIFAEMMLGEPI 231
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--SDAKLFDFSLSL 195
F+ SL K A I + LH I++ D+KP NIL +Q S K+ DF S
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 196 SIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLTA 244
H + + + + + APE D++ G L ELLT
Sbjct: 251 Y-----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE 219
+H IV+ D+KP N L + KL DF ++ + + DS VGT ++ PE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
Query: 220 NFTTLINEQ------------CDVYGFGAFLF 239
+ + + DV+ G L+
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + +H ++ +A +LT + + +
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKS 107
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +++ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 108 YLFQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--SDAKLFDFSLSL 195
F+ SL K A I + LH I++ D+KP NIL +Q S K+ DF S
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 196 SIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLTA 244
H + + + + + APE D++ G L ELLT
Sbjct: 251 Y-----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 47/226 (20%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
+I+ E ++ G+L D + F + L L+ I + YL V+RD+
Sbjct: 106 MIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSAVHRDLA 158
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTG------FIAPENFT-TLINE 227
NIL N K+ DF +S + D + ++ T G + APE
Sbjct: 159 ARNILVNSNLVCKVSDFGMSRVLED-----DPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 213
Query: 228 QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSGQNCRFKEMVDSIIIED 284
DV+ +G ++E++ S+ R +++ ++V + + R +D I
Sbjct: 214 ASDVWSYGIVMWEVM---------SYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI--- 261
Query: 285 KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
A QL L C DRP + L ++ R+
Sbjct: 262 -------------ALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 38/118 (32%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI---PDGETHI-------- 204
V Y+H S I++RD+KP N L N+ K+ DF L+ ++ +G + +
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 205 --------------ELDSVVGTTGFIAP------ENFTTLINEQCDVYGFGAFLFELL 242
+L V T + AP EN+T E DV+ G ELL
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT----EAIDVWSIGCIFAELL 278
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 169 VYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSV-VGTTGFIAPE--NFTTLI 225
V+R++ N+L + AK+ DF LS ++ +++ S + APE NF
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF- 516
Query: 226 NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDK 285
+ + DV+ +G ++E L+ + ++ K++ G V + I + K
Sbjct: 517 SSRSDVWSYGVTMWEALS--------------YGQKPYKKMKGPE------VMAFIEQGK 556
Query: 286 SCTCTGK-EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
C + +L A L C + EDRP + V +++R Y S
Sbjct: 557 RMECPPECPPELYA---LMSDCWIYKWEDRPDFLTVEQRMRACYYS 599
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTT 213
V+Y H S I +RD+K N L + K+ DF S S H + S VGT
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTP 181
Query: 214 GFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
+IAPE L+ ++ DV+ G L+ +L
Sbjct: 182 AYIAPE---VLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--SDAKLFDFSLSL 195
F+ SL K A I + LH I++ D+KP NIL +Q S K+ DF S
Sbjct: 194 FQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 196 SIPDGETHIELDSVVGTTGFIAPEN-FTTLINEQCDVYGFGAFLFELLTA 244
H + + + + APE D++ G L ELLT
Sbjct: 251 Y-----EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Query: 149 VAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---------------NEQS----DAKLF 189
+A + AV +LH + + D+KP NILF +E+S ++
Sbjct: 142 MAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVV 198
Query: 190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTL-INEQCDVYGFGAFLFE 240
DF + D E H ++V T + APE L ++ CDV+ G +FE
Sbjct: 199 DFGSATF--DHEHH---STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 47/242 (19%)
Query: 100 HIVYASRMSHKHIIKLIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAY 159
++++ + K +I+ E ++ G+L D + F + L L+ IA + Y
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLR---GIAAGMKY 124
Query: 160 LHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG---TTGFI 216
L V+R + NIL N K+ DF LS + D + S +G +
Sbjct: 125 LA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 217 APE-----NFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE---ENVKRLSG 268
APE FT+ DV+ +G ++E++ S+ R +++ ++V
Sbjct: 182 APEAIQYRKFTS----ASDVWSYGIVMWEVM---------SYGERPYWDMTNQDVINAIE 228
Query: 269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY 328
Q+ R +D C A QL L C RP + L +M
Sbjct: 229 QDYRLPPPMD--------CP--------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
Query: 329 RS 330
R+
Sbjct: 273 RN 274
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 93 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 144
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 203
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 204 WSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 87 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 138
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 197
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 198 WSFGVLMWEAFS 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 97 CINHIVYASRMSHKHIIKL--IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAM--- 151
I I ++H +I+KL ++ ++ + + + ++ +A +LT + + +
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-IPLPLIKS 110
Query: 152 ---DIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS 208
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 209 VVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
V T + APE + D++ G E++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 83 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 134
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 193
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 194 WSFGVLMWEAFS 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPEN-FTTLIN 226
IV+RD+KP NIL KL DF L+ + L VV T + APE +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEVLLQSTYA 189
Query: 227 EQCDVYGFGAFLFELL 242
D++ G E+
Sbjct: 190 TPVDMWSVGCIFAEMF 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 81 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 132
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 133 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 191
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 192 WSFGVLMWEAFS 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 103 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 154
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 213
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 214 WSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 103 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 154
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + + APE N+ + + DV
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 213
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 214 WSFGVLMWEAFS 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 30/102 (29%)
Query: 168 IVYRDMKPTNILFNEQSDAKLFDFSLSLSI-PDGETHI-------------------ELD 207
I++RD+KP N L N+ K+ DF L+ +I + +T+I +L
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 208 SVVGTTGFIAP------ENFTTLINEQCDVYGFGAFLFELLT 243
S V T + AP EN+T I D++ G ELL
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSI----DIWSTGCIFAELLN 247
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 169 VYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLI 225
V+RD+ N+L Q AK+ DF LS ++ E + + + + APE N+
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF- 205
Query: 226 NEQCDVYGFGAFLFELLT 243
+ + DV+ FG ++E +
Sbjct: 206 SSKSDVWSFGVLMWEAFS 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 98 INHIVYASRMSHKHIIKL-IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHA 156
+ I + HK+I++L V S + TL + C+Q + D +D
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTL---VFEFCDQDLK--KYFDSCNGDLDPEIV 103
Query: 157 VAYL-----HVGF--SRPIVYRDMKPTNILFNEQSDAKLFDFSLS 194
++L +GF SR +++RD+KP N+L N + KL +F L+
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVG 211
I + YLH IV+RD+K N+L N S K+ DF S + E + G
Sbjct: 131 ILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTG 185
Query: 212 TTGFIAPE---NFTTLINEQCDVYGFGAFLFELLTAQ 245
T ++APE + D++ G + E+ T +
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS 194
H + LHV +V+RD+ P NIL + +D + DF+L+
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 155 HAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS 194
H + LHV +V+RD+ P NIL + +D + DF+L+
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 169 VYRDMKPTNILFNEQ--SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-NFTTLI 225
V+ D+KP NI+F + ++ KL DF L+ + D + +++ GT F APE +
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKV--TTGTAEFAAPEVAEGKPV 227
Query: 226 NEQCDVYGFGAFLFELLTA 244
D++ G + LL+
Sbjct: 228 GYYTDMWSVGVLSYILLSG 246
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G V T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 213 TGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
+ APE + D++ G E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G V T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 213 TGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
+ APE + D++ G E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G V T
Sbjct: 113 LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 213 TGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
+ APE + D++ G E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 134 CEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAK-----L 188
C++ F +L L +A+ + + Y+H ++ ++YRD+KP N L + +
Sbjct: 93 CDRTF---TLKTVLMIAIQLITRMEYVH---TKSLIYRDVKPENFLVGRPGTKRQHAIHI 146
Query: 189 FDFSLSLSIPDGET--HI---ELDSVVGTTGFIA 217
DF L+ D ET HI E S+ GT +++
Sbjct: 147 IDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 180
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 169 VYRDMKPTNILFNEQ--SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPE-NFTTLI 225
V+ D+KP NI+F + ++ KL DF L+ + D + +++ GT F APE +
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKV--TTGTAEFAAPEVAEGKPV 333
Query: 226 NEQCDVYGFGAFLFELLTA 244
D++ G + LL+
Sbjct: 334 GYYTDMWSVGVLSYILLSG 352
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 169 VYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLI 225
V+RD+ N+L Q AK+ DF LS ++ E + + + + APE N+
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF- 550
Query: 226 NEQCDVYGFGAFLFELLT 243
+ + DV+ FG ++E +
Sbjct: 551 SSKSDVWSFGVLMWEAFS 568
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGT 212
+ +A+ H S +++RD+KP N+L N + KL DF L+ + G V T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 213 TGFIAPENFT--TLINEQCDVYGFGAFLFELLT 243
+ APE + D++ G E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 169 VYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLI 225
V+RD+ N+L Q AK+ DF LS ++ E + + + + APE N+
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF- 549
Query: 226 NEQCDVYGFGAFLFELLT 243
+ + DV+ FG ++E +
Sbjct: 550 SSKSDVWSFGVLMWEAFS 567
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 42/236 (17%)
Query: 109 HKHIIKL--IVFESVQIGTLADRIHHHC--------EQHFEALSLTDRLKVAMDIAHAVA 158
H +II+L +V S+ + L + + + + F + L L+ IA +
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMR 130
Query: 159 YLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG---TTGF 215
YL V+RD+ NIL N K+ DF LS + + + S +G +
Sbjct: 131 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 216 IAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE D + +G ++E++ SF R +++ +S Q+
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVM---------SFGERPYWD-----MSNQDVINA 233
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
D + C + QL L C RP V L +M R+
Sbjct: 234 IEQDYRLPPPPDCPTS--------LHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 153 IAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA-KLFDFSLSLSIPDGETHIELDSVVG 211
I + YLH IV+RD+K N+L N S K+ DF S + E + G
Sbjct: 117 ILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTG 171
Query: 212 TTGFIAPE---NFTTLINEQCDVYGFGAFLFELLTAQ 245
T ++APE + D++ G + E+ T +
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPD 199
+L++ +V + + + Y+H I++RDMK N+L KL DF L + S+
Sbjct: 122 TLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 200 GETHIELDSVVGTTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
+ V T + PE L+ E+ D++G G + E+ T +
Sbjct: 179 NSQPNRYXNRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWTRSPI 228
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 115 LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK 174
++V E ++G L + + +H + ++ +++ ++ + YL V+RD+
Sbjct: 87 MLVMEMAELGPLNKYLQQN--RHVKDKNI---IELVHQVSMGMKYLE---ESNFVHRDLA 138
Query: 175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDS-VVGTTGFIAPE--NFTTLINEQCDV 231
N+L Q AK+ DF LS ++ E + + + APE N+ + + DV
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF-SSKSDV 197
Query: 232 YGFGAFLFELLT 243
+ FG ++E +
Sbjct: 198 WSFGVLMWEAFS 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPD 199
+L++ +V + + + Y+H I++RDMK N+L KL DF L + S+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 200 GETHIELDSVVGTTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
+ V T + PE L+ E+ D++G G + E+ T +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWTRSPI 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPD 199
+L++ +V + + + Y+H I++RDMK N+L KL DF L + S+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 200 GETHIELDSVVGTTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
+ V T + PE L+ E+ D++G G + E+ T +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWTRSPI 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 142 SLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL--SLSIPD 199
+L++ +V + + + Y+H I++RDMK N+L KL DF L + S+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 200 GETHIELDSVVGTTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTAQEV 247
+ V T + PE L+ E+ D++G G + E+ T +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWTRSPI 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTT 213
V+Y H + + +RD+K N L + K+ DF S S H + S VGT
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTP 179
Query: 214 GFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
+IAPE L+ ++ DV+ G L+ +L
Sbjct: 180 AYIAPE---VLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTT 213
V+Y H + + +RD+K N L + K+ DF S S H + S VGT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTP 180
Query: 214 GFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
+IAPE L+ ++ DV+ G L+ +L
Sbjct: 181 AYIAPE---VLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N+L + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 140 ALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD 199
AL D + + IA + YL S +V++D+ N+L ++ + K+ D L +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 200 GETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
+ + L + + ++APE + D++ +G L+E+ +
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDA--KLFDFSLSLSIPDGETHIELDSVVGTT 213
V+Y H + + +RD+K N L + K+ DF S + H + S VGT
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTP 180
Query: 214 GFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
+IAPE L+ ++ DV+ G L+ +L
Sbjct: 181 AYIAPE---VLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 123 IGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE 182
+G + + + C + F SL L +A + + Y+H S+ ++RD+KP N L
Sbjct: 87 LGPSLEDLFNFCSRKF---SLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGL 140
Query: 183 QSDAKL---FDFSLSLSIPDGETH 203
L DF L+ D TH
Sbjct: 141 GKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 140 ALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD 199
AL D + + IA + YL S +V++D+ N+L ++ + K+ D L +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 200 GETHIELDSVVGTTGFIAPENFT-TLINEQCDVYGFGAFLFELLT 243
+ + L + + ++APE + D++ +G L+E+ +
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 123 IGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE 182
+G + + + C + F SL L +A + + Y+H S+ ++RD+KP N L
Sbjct: 87 LGPSLEDLFNFCSRKF---SLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGL 140
Query: 183 QSDAKL---FDFSLSLSIPDGETH 203
L DF L+ D TH
Sbjct: 141 GKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 35/161 (21%)
Query: 106 RMSHKHIIKLI-------------VFESVQIG------TLADRIHHHCEQHFEALSLTDR 146
R+ HK++I+L+ V E G ++ ++ C+ H L D
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 147 LKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIEL 206
L+ YLH S+ IV++D+KP N+L K+ ++ ++
Sbjct: 122 LE----------YLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 207 DSVVGTTGFIAPE---NFTTLINEQCDVYGFGAFLFELLTA 244
+ G+ F PE T + D++ G L+ + T
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 123 IGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE 182
+G + + + C + F SL L +A + + Y+H S+ ++RD+KP N L
Sbjct: 85 LGPSLEDLFNFCSRKF---SLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGL 138
Query: 183 QSDAKL---FDFSLSLSIPDGETH 203
L DF L+ D TH
Sbjct: 139 GKKGNLVYIIDFGLAKKYRDARTH 162
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 42/236 (17%)
Query: 109 HKHIIKL--IVFESVQIGTLADRIHHHC--------EQHFEALSLTDRLKVAMDIAHAVA 158
H +II+L +V S+ + L + + + + F + L L+ IA +
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMR 132
Query: 159 YLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG---TTGF 215
YL V+RD+ NIL N K+ DF LS + + + S +G +
Sbjct: 133 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 216 IAPENFT-TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK 274
APE D + +G ++E++ SF R +++ +S Q+
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVM---------SFGERPYWD-----MSNQDVINA 235
Query: 275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS 330
D + C + QL L C RP V L +M R+
Sbjct: 236 IEQDYRLPPPPDCPTS--------LHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 23/106 (21%)
Query: 143 LTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGET 202
L + + IA +A++ R ++RD++ NIL + K+ DF L+
Sbjct: 277 LPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLAR------- 326
Query: 203 HIELDSVVGT---TGFIAPE--NFTTLINEQCDVYGFGAFLFELLT 243
VG + APE NF + + DV+ FG L E++T
Sbjct: 327 -------VGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVT 364
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 178 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 229
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 120 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 177 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 228
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 178 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 229
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 127 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 183
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 184 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 235
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 156 AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL----FDFSLSLSIPDGETHIELDSVVG 211
V+Y H + + +RD+K N L + +L F +S S + H + S VG
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL-----HSQPKSTVG 178
Query: 212 TTGFIAPENFTTLINEQ-----CDVYGFGAFLFELLTA 244
T +IAPE L+ ++ DV+ G L+ +L
Sbjct: 179 TPAYIAPE---VLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 135 EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSL 193
+Q ++ L+ D +I A+ Y H S I++RD+KP N++ + E +L D+ L
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 194 SLSIPDGETHIELDSVVGTTGFIAPENFT--TLINEQCDVYGFGAFLFELLTAQE 246
+ G+ E + V + F PE + + D++ G L ++ +E
Sbjct: 179 AEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 91 QHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIGTLADRI--HHHCEQH 137
Q+AL H V H H+++ LI E G+LAD I ++ +
Sbjct: 55 QNALREVYAHAVLGQ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS 184
F+ L D L + + + Y+H S +V+ D+KP+NI + S
Sbjct: 112 FKEAELKDLL---LQVGRGLRYIH---SMSLVHMDIKPSNIFISRTS 152
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 91 QHALEWCINHIVYASRMSHKHIIK-----------LIVFESVQIGTLADRI--HHHCEQH 137
Q+AL H V H H+++ LI E G+LAD I ++ +
Sbjct: 53 QNALREVYAHAVLGQ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 109
Query: 138 FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS 184
F+ L D L + + + Y+H S +V+ D+KP+NI + S
Sbjct: 110 FKEAELKDLL---LQVGRGLRYIH---SMSLVHMDIKPSNIFISRTS 150
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,727,077
Number of Sequences: 62578
Number of extensions: 392488
Number of successful extensions: 2447
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 1370
Number of HSP's gapped (non-prelim): 1171
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)