Query         038681
Match_columns 332
No_of_seqs    366 out of 2299
Neff          9.7 
Searched_HMMs 29240
Date          Mon Mar 25 23:43:08 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038681hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3omv_A RAF proto-oncogene seri 100.0 3.7E-62 1.3E-66  433.1  20.2  257   49-331    31-302 (307)
  2 4asz_A BDNF/NT-3 growth factor 100.0   1E-61 3.6E-66  429.9  17.8  251   53-330    12-290 (299)
  3 4aoj_A High affinity nerve gro 100.0 7.6E-61 2.6E-65  429.9  20.7  251   53-330    40-320 (329)
  4 4gt4_A Tyrosine-protein kinase 100.0 4.6E-61 1.6E-65  427.5  17.5  248   54-327    26-304 (308)
  5 3fpq_A Serine/threonine-protei 100.0 6.5E-60 2.2E-64  415.7  22.3  233   57-322    29-282 (290)
  6 4fih_A Serine/threonine-protei 100.0   1E-60 3.5E-65  429.2  17.2  236   54-322    74-323 (346)
  7 4b9d_A Serine/threonine-protei 100.0 1.1E-60 3.6E-65  429.7  17.4  238   54-322    24-276 (350)
  8 4ase_A Vascular endothelial gr 100.0 1.1E-60 3.8E-65  432.2  17.4  262   44-330    54-348 (353)
  9 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.4E-61 1.9E-65  424.9  13.4  236   54-321    32-283 (311)
 10 4g3f_A NF-kappa-beta-inducing  100.0 2.9E-60   1E-64  425.0  18.0  243   53-330    57-317 (336)
 11 3hyh_A Carbon catabolite-derep 100.0 1.3E-59 4.5E-64  410.4  19.7  233   54-322    13-262 (275)
 12 3hmm_A TGF-beta receptor type- 100.0 2.6E-59 8.8E-64  416.6  19.4  261   54-330     3-298 (303)
 13 4fie_A Serine/threonine-protei 100.0 2.6E-59 8.8E-64  430.0  19.1  236   54-322   151-400 (423)
 14 3ubd_A Ribosomal protein S6 ki 100.0 5.3E-59 1.8E-63  412.0   9.5  235   54-322    24-281 (304)
 15 4g31_A Eukaryotic translation  100.0 2.2E-57 7.4E-62  402.7  17.2  239   54-322     5-279 (299)
 16 4b99_A Mitogen-activated prote 100.0   4E-55 1.4E-59  402.3  22.0  258   54-322    54-344 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 1.2E-53   4E-58  388.4  19.8  187   52-252    19-251 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0 3.3E-53 1.1E-57  407.2  18.4  239   53-322   156-410 (573)
 19 3v5w_A G-protein coupled recep 100.0 5.5E-53 1.9E-57  404.9  19.2  237   53-322   188-449 (689)
 20 2nru_A Interleukin-1 receptor- 100.0 4.2E-50 1.4E-54  358.2  27.6  279   38-330     9-307 (307)
 21 2qkw_B Protein kinase; three-h 100.0 2.9E-51 9.8E-56  368.2  18.6  277   41-329    26-315 (321)
 22 3soc_A Activin receptor type-2 100.0 2.9E-51 9.9E-56  368.5  17.5  264   52-330    22-319 (322)
 23 3uim_A Brassinosteroid insensi 100.0 1.1E-50 3.8E-55  365.0  19.7  278   37-326    13-308 (326)
 24 3p86_A Serine/threonine-protei 100.0 1.1E-50 3.8E-55  362.7  18.4  259   43-330    26-299 (309)
 25 3zgw_A Maternal embryonic leuc 100.0 1.9E-50 6.5E-55  366.2  17.9  238   52-322     8-260 (347)
 26 3fe3_A MAP/microtubule affinit 100.0   4E-50 1.4E-54  361.8  19.7  236   52-322    13-264 (328)
 27 3fxz_A Serine/threonine-protei 100.0 5.8E-50   2E-54  356.0  19.7  237   53-322    19-269 (297)
 28 3vhe_A Vascular endothelial gr 100.0 2.5E-50 8.5E-55  367.4  17.6  264   42-330    10-356 (359)
 29 2psq_A Fibroblast growth facto 100.0 1.6E-49 5.6E-54  363.7  22.9  252   53-330    80-365 (370)
 30 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-49 4.4E-54  355.7  19.7  249   53-330     9-283 (310)
 31 3lb7_A RAF proto-oncogene seri 100.0 5.6E-49 1.9E-53  351.3  22.5  255   51-331    33-302 (307)
 32 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-50   8E-55  370.3  13.2  257   44-330   104-375 (377)
 33 3ugc_A Tyrosine-protein kinase 100.0 1.4E-49 4.9E-54  352.8  16.8  262   53-331     9-293 (295)
 34 2yab_A Death-associated protei 100.0 2.7E-49 9.2E-54  360.7  19.0  239   53-322    11-272 (361)
 35 3kul_A Ephrin type-A receptor  100.0 4.4E-49 1.5E-53  354.7  19.8  248   53-330    48-314 (325)
 36 4eqm_A Protein kinase; transfe 100.0 2.5E-49 8.7E-54  351.4  17.4  248   53-328    10-274 (294)
 37 2c30_A Serine/threonine-protei 100.0 8.3E-49 2.8E-53  352.4  20.6  248   42-322    23-294 (321)
 38 1mp8_A Focal adhesion kinase 1 100.0   2E-49 6.8E-54  349.6  16.0  249   51-330    12-277 (281)
 39 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-49 7.6E-54  354.4  16.5  258   47-330    16-312 (314)
 40 4hcu_A Tyrosine-protein kinase 100.0 5.6E-49 1.9E-53  344.5  18.0  246   52-330     8-267 (269)
 41 4euu_A Serine/threonine-protei 100.0 1.7E-48 5.7E-53  349.9  21.2  265   53-326     8-306 (319)
 42 3l9p_A Anaplastic lymphoma kin 100.0   3E-49   1E-53  361.6  16.4  251   53-329    70-345 (367)
 43 3tt0_A Basic fibroblast growth 100.0   2E-48   7E-53  358.0  21.8  255   50-330    65-353 (382)
 44 1tki_A Titin; serine kinase, m 100.0 5.1E-49 1.8E-53  353.7  17.3  238   53-322     4-257 (321)
 45 3soa_A Calcium/calmodulin-depe 100.0 1.7E-48 5.9E-53  364.3  21.4  240   53-322    10-267 (444)
 46 1o6l_A RAC-beta serine/threoni 100.0 1.2E-48 4.1E-53  353.3  19.5  236   53-322     4-260 (337)
 47 1luf_A Muscle-specific tyrosin 100.0 2.8E-49 9.7E-54  358.1  15.3  257   48-330    41-336 (343)
 48 3tki_A Serine/threonine-protei 100.0 5.6E-49 1.9E-53  353.8  17.0  241   53-322     6-261 (323)
 49 2y0a_A Death-associated protei 100.0 1.1E-48 3.9E-53  352.2  18.8  238   54-322    11-271 (326)
 50 3poz_A Epidermal growth factor 100.0 3.7E-49 1.3E-53  355.5  15.5  247   53-329    14-278 (327)
 51 2bdw_A Hypothetical protein K1 100.0 1.2E-48 4.1E-53  356.9  19.0  240   52-322    27-284 (362)
 52 3q4u_A Activin receptor type-1 100.0 2.1E-48 7.1E-53  346.0  19.2  253   53-327     7-300 (301)
 53 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.5E-48   5E-53  341.5  17.8  245   52-329     6-264 (268)
 54 4f0f_A Serine/threonine-protei 100.0 2.9E-48 9.9E-53  343.0  19.7  243   53-327    18-287 (287)
 55 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-48 9.7E-53  347.0  19.7  258   49-331    18-309 (313)
 56 2eva_A TAK1 kinase - TAB1 chim 100.0 5.4E-48 1.8E-52  344.9  21.4  247   53-330     7-264 (307)
 57 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-48 5.1E-53  366.2  18.7  244   50-330   189-446 (450)
 58 3kex_A Receptor tyrosine-prote 100.0 5.5E-49 1.9E-53  354.1  14.7  247   53-329    12-276 (325)
 59 1rjb_A FL cytokine receptor; k 100.0 6.4E-49 2.2E-53  356.1  15.2  257   49-330    40-335 (344)
 60 3g2f_A Bone morphogenetic prot 100.0 2.3E-48   8E-53  351.2  18.7  265   52-331    11-320 (336)
 61 3gen_A Tyrosine-protein kinase 100.0 8.5E-49 2.9E-53  345.7  15.3  249   49-330    19-281 (283)
 62 3og7_A AKAP9-BRAF fusion prote 100.0 1.9E-48 6.5E-53  344.8  17.6  251   51-329    21-288 (289)
 63 3cc6_A Protein tyrosine kinase 100.0 4.4E-48 1.5E-52  340.9  19.8  248   52-330    10-274 (281)
 64 2xir_A Vascular endothelial gr 100.0 1.5E-48 5.2E-53  349.2  16.9  263   43-330    16-311 (316)
 65 3qup_A Tyrosine-protein kinase 100.0 9.1E-49 3.1E-53  352.1  15.3  257   48-330    17-299 (323)
 66 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-48 3.9E-53  355.6  15.7  238   51-322    20-280 (353)
 67 4e5w_A Tyrosine-protein kinase 100.0 1.9E-48 6.6E-53  346.5  16.4  259   54-329    21-302 (302)
 68 2qol_A Ephrin receptor; recept 100.0 3.5E-48 1.2E-52  355.2  18.6  248   53-330    44-310 (373)
 69 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.8E-49 3.3E-53  353.6  14.7  234   53-322     8-258 (336)
 70 4fr4_A YANK1, serine/threonine 100.0 3.9E-48 1.3E-52  355.3  18.6  238   53-322    14-271 (384)
 71 3lzb_A Epidermal growth factor 100.0 2.2E-48 7.6E-53  350.5  16.6  247   53-329    14-278 (327)
 72 3lxp_A Non-receptor tyrosine-p 100.0 4.5E-48 1.5E-52  347.1  18.5  257   56-331    33-312 (318)
 73 1qcf_A Haematopoetic cell kina 100.0 5.8E-49   2E-53  369.5  13.0  254   44-329   178-444 (454)
 74 2pmi_A Negative RE, cyclin-dep 100.0   6E-48 2.1E-52  346.1  19.0  263   52-322     3-293 (317)
 75 2izr_A Casein kinase I isoform 100.0 4.1E-48 1.4E-52  349.1  18.0  250   53-330     8-282 (330)
 76 4dc2_A Protein kinase C IOTA t 100.0 3.1E-48 1.1E-52  357.1  17.4  241   52-317    50-307 (396)
 77 1xjd_A Protein kinase C, theta 100.0   2E-48   7E-53  352.8  15.8  239   49-321    12-268 (345)
 78 1p4o_A Insulin-like growth fac 100.0 8.3E-49 2.8E-53  352.1  13.1  266   38-329     9-299 (322)
 79 3c0i_A Peripheral plasma membr 100.0 2.7E-48 9.2E-53  353.3  16.4  243   53-322    23-286 (351)
 80 1fot_A TPK1 delta, CAMP-depend 100.0 6.7E-48 2.3E-52  345.8  18.6  233   53-322     5-258 (318)
 81 1csn_A Casein kinase-1; phosph 100.0 3.5E-47 1.2E-51  337.6  22.4  251   53-330     9-284 (298)
 82 1qpc_A LCK kinase; alpha beta  100.0 5.2E-48 1.8E-52  340.0  16.8  251   48-330     7-270 (279)
 83 2pvf_A Fibroblast growth facto 100.0 1.7E-47 5.7E-52  345.6  20.5  254   51-330    32-319 (334)
 84 3mdy_A Bone morphogenetic prot 100.0 3.2E-47 1.1E-51  343.7  22.3  254   49-330    32-332 (337)
 85 3brb_A Proto-oncogene tyrosine 100.0 7.4E-48 2.5E-52  344.7  17.8  257   49-331    29-310 (313)
 86 1kob_A Twitchin; kinase, intra 100.0 7.9E-48 2.7E-52  354.1  18.4  239   53-322    50-304 (387)
 87 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.1E-48 2.4E-52  350.1  17.8  233   53-322    40-293 (350)
 88 2zv2_A Calcium/calmodulin-depe 100.0 9.9E-48 3.4E-52  341.6  18.4  237   53-322    12-292 (298)
 89 1byg_A CSK, protein (C-termina 100.0 3.9E-48 1.3E-52  340.8  15.5  245   49-330    16-274 (278)
 90 2i1m_A Macrophage colony-stimu 100.0 3.9E-48 1.3E-52  349.4  15.7  258   48-330    40-327 (333)
 91 3is5_A Calcium-dependent prote 100.0 1.3E-47 4.4E-52  338.9  18.7  241   54-322    22-278 (285)
 92 3f66_A Hepatocyte growth facto 100.0 1.9E-47 6.4E-52  339.6  19.8  249   53-331    24-293 (298)
 93 3kk8_A Calcium/calmodulin depe 100.0   2E-47 6.7E-52  337.1  19.8  239   53-322     5-261 (284)
 94 3uc3_A Serine/threonine-protei 100.0 2.2E-47 7.5E-52  348.5  20.7  240   52-322    18-274 (361)
 95 4eut_A Serine/threonine-protei 100.0 5.5E-48 1.9E-52  356.8  16.8  268   53-329     8-309 (396)
 96 3dtc_A Mitogen-activated prote 100.0 5.6E-48 1.9E-52  338.3  15.8  240   53-327     6-271 (271)
 97 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-47 3.8E-52  337.6  17.7  238   53-322     8-261 (277)
 98 3o0g_A Cell division protein k 100.0 2.2E-47 7.5E-52  338.4  19.7  258   54-322     2-282 (292)
 99 1u59_A Tyrosine-protein kinase 100.0 2.2E-47 7.6E-52  337.5  19.6  248   53-330     8-273 (287)
100 1xbb_A Tyrosine-protein kinase 100.0 7.9E-48 2.7E-52  341.1  16.6  254   46-330     8-280 (291)
101 3niz_A Rhodanese family protei 100.0 3.1E-47 1.1E-51  340.7  20.6  258   53-322    20-300 (311)
102 3kfa_A Tyrosine-protein kinase 100.0 6.3E-48 2.2E-52  340.9  15.9  250   49-330     8-272 (288)
103 3a8x_A Protein kinase C IOTA t 100.0 2.7E-47 9.1E-52  345.7  20.4  240   53-317     8-264 (345)
104 3op5_A Serine/threonine-protei 100.0 9.3E-48 3.2E-52  351.4  17.5  258   52-330    33-330 (364)
105 3kmu_A ILK, integrin-linked ki 100.0 9.7E-48 3.3E-52  336.3  16.6  242   53-329     9-270 (271)
106 2y94_A 5'-AMP-activated protei 100.0   2E-47 6.9E-52  359.6  19.9  235   53-322    15-266 (476)
107 3ork_A Serine/threonine protei 100.0 5.7E-48 1.9E-52  345.3  15.4  247   53-327    11-279 (311)
108 3t9t_A Tyrosine-protein kinase 100.0 6.3E-48 2.1E-52  337.1  15.1  246   52-330     6-265 (267)
109 2w4o_A Calcium/calmodulin-depe 100.0   8E-48 2.7E-52  349.8  16.3  239   51-322    50-305 (349)
110 2eue_A Carbon catabolite derep 100.0 2.7E-47 9.1E-52  334.9  19.0  233   54-322    13-262 (275)
111 3c1x_A Hepatocyte growth facto 100.0 9.1E-48 3.1E-52  352.3  16.6  246   56-331    91-357 (373)
112 3pls_A Macrophage-stimulating  100.0 5.6E-47 1.9E-51  336.3  21.1  247   55-331    22-289 (298)
113 2a2a_A Death-associated protei 100.0 1.7E-47 5.7E-52  343.8  17.7  238   54-322    12-272 (321)
114 3v8s_A RHO-associated protein  100.0 1.2E-48 4.1E-53  361.7  10.5  247   46-322    61-329 (410)
115 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.5E-48 1.5E-52  363.2  14.5  252   46-329   176-440 (452)
116 3ttj_A Mitogen-activated prote 100.0 4.8E-47 1.6E-51  356.9  21.4  254   53-322    61-355 (464)
117 3kn6_A Ribosomal protein S6 ki 100.0   7E-48 2.4E-52  346.9  15.0  237   59-322    16-270 (325)
118 2x4f_A Myosin light chain kina 100.0 2.5E-47 8.5E-52  349.5  18.7  233   59-322    94-342 (373)
119 1opk_A P150, C-ABL, proto-onco 100.0 6.6E-48 2.2E-52  365.8  15.3  250   48-329   214-478 (495)
120 3mwu_A Calmodulin-domain prote 100.0 2.7E-47 9.4E-52  361.1  19.4  238   54-322    22-276 (486)
121 3qd2_B Eukaryotic translation  100.0 2.8E-47 9.6E-52  343.0  18.5  240   53-322     5-325 (332)
122 2i0e_A Protein kinase C-beta I 100.0   2E-47 6.7E-52  347.4  17.1  238   51-322    17-276 (353)
123 3q5i_A Protein kinase; CDPK, m 100.0 3.6E-47 1.2E-51  361.8  19.7  239   53-322    35-301 (504)
124 4hgt_A Casein kinase I isoform 100.0 5.4E-47 1.8E-51  335.9  19.4  252   52-330     7-281 (296)
125 4agu_A Cyclin-dependent kinase 100.0 5.8E-47   2E-51  338.5  19.7  257   54-322     3-284 (311)
126 3oz6_A Mitogen-activated prote 100.0 1.1E-46 3.7E-51  347.2  21.7  259   52-322     7-328 (388)
127 3lxl_A Tyrosine-protein kinase 100.0   1E-47 3.5E-52  346.0  14.4  262   53-330    22-304 (327)
128 1mqb_A Ephrin type-A receptor  100.0 1.2E-46 4.2E-51  339.9  21.4  248   53-330    43-310 (333)
129 3fdn_A Serine/threonine-protei 100.0 3.5E-47 1.2E-51  334.8  17.4  235   52-322     7-257 (279)
130 3a62_A Ribosomal protein S6 ki 100.0 5.7E-47   2E-51  341.3  19.1  236   53-322    16-276 (327)
131 1t4h_A Serine/threonine-protei 100.0 1.9E-46 6.4E-51  332.0  22.1  235   55-322    27-282 (290)
132 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-47   7E-52  346.0  16.1  238   53-322    21-277 (342)
133 2yex_A Serine/threonine-protei 100.0 4.3E-47 1.5E-51  333.4  17.7  241   53-322     6-261 (276)
134 3lij_A Calcium/calmodulin depe 100.0 4.2E-47 1.4E-51  360.6  18.9  238   54-322    37-291 (494)
135 4aw2_A Serine/threonine-protei 100.0 3.5E-48 1.2E-52  361.2  11.2  251   45-322    65-338 (437)
136 4ejn_A RAC-alpha serine/threon 100.0 1.2E-47   4E-52  359.9  14.6  237   52-322   146-404 (446)
137 1ob3_A PFPK5, cell division co 100.0 2.1E-47 7.3E-52  337.9  15.3  257   54-322     2-280 (288)
138 2h34_A Serine/threonine-protei 100.0 3.3E-47 1.1E-51  340.1  16.6  247   53-329    33-296 (309)
139 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-46 4.6E-51  333.5  20.3  251   53-330     8-281 (296)
140 2ac3_A MAP kinase-interacting  100.0 4.5E-47 1.5E-51  339.9  17.4  255   54-322    12-295 (316)
141 1fvr_A Tyrosine-protein kinase 100.0 3.5E-47 1.2E-51  342.5  16.6  248   54-330    25-301 (327)
142 3rp9_A Mitogen-activated prote 100.0 2.4E-46 8.2E-51  352.2  22.8  182   53-243    52-279 (458)
143 3g33_A Cell division protein k 100.0   7E-47 2.4E-51  337.6  18.0  259   52-322     7-296 (308)
144 3i6u_A CDS1, serine/threonine- 100.0 5.3E-47 1.8E-51  352.6  17.7  242   51-322   132-399 (419)
145 1nxk_A MAP kinase-activated pr 100.0 9.4E-47 3.2E-51  348.8  19.2  238   54-322    61-321 (400)
146 3nyv_A Calmodulin-domain prote 100.0 1.8E-47 6.3E-52  362.2  14.8  239   53-322    25-281 (484)
147 3hko_A Calcium/calmodulin-depe 100.0 4.4E-47 1.5E-51  344.1  16.6  250   50-322    22-330 (345)
148 1cm8_A Phosphorylated MAP kina 100.0 1.2E-46   4E-51  344.4  19.4  253   53-322    24-307 (367)
149 2wqm_A Serine/threonine-protei 100.0 2.3E-46   8E-51  334.5  20.9  253   52-330    30-298 (310)
150 2yfx_A Tyrosine-protein kinase 100.0 6.6E-47 2.3E-51  340.7  17.4  252   52-329    28-304 (327)
151 2jam_A Calcium/calmodulin-depe 100.0 1.1E-46 3.6E-51  335.9  18.4  237   53-322     8-261 (304)
152 2zmd_A Dual specificity protei 100.0 1.6E-46 5.5E-51  346.1  20.2  238   54-322    56-320 (390)
153 3n9x_A Phosphotransferase; mal 100.0 2.7E-46 9.1E-51  349.2  21.9  188   53-249    25-253 (432)
154 2w1i_A JAK2; chromosomal rearr 100.0 8.2E-47 2.8E-51  340.0  17.4  262   53-331    40-324 (326)
155 3llt_A Serine/threonine kinase 100.0 4.8E-47 1.6E-51  346.0  16.0  269   38-322    19-355 (360)
156 3dls_A PAS domain-containing s 100.0 4.7E-47 1.6E-51  342.9  15.8  229   53-322    23-274 (335)
157 2vd5_A DMPK protein; serine/th 100.0 1.2E-47 4.2E-52  355.1  12.2  251   44-322    51-327 (412)
158 3gni_B Strad alpha; kinase fol 100.0 8.6E-47 2.9E-51  348.0  17.8  260   52-322    23-333 (389)
159 4fvq_A Tyrosine-protein kinase 100.0 2.4E-47 8.1E-52  337.4  13.4  238   53-329     7-275 (289)
160 3eqc_A Dual specificity mitoge 100.0 5.3E-47 1.8E-51  345.7  16.1  256   53-322    32-324 (360)
161 3dbq_A Dual specificity protei 100.0 1.3E-46 4.5E-51  341.0  18.4  239   53-322     8-273 (343)
162 3bhy_A Death-associated protei 100.0 1.2E-46 4.2E-51  331.8  17.6  244   54-328     5-273 (283)
163 3p1a_A MYT1 kinase, membrane-a 100.0 9.4E-47 3.2E-51  337.5  17.1  233   54-322    57-304 (311)
164 1b6c_B TGF-B superfamily recep 100.0 1.6E-45 5.4E-50  333.4  25.0  263   43-330    31-337 (342)
165 2r5t_A Serine/threonine-protei 100.0 4.6E-47 1.6E-51  347.3  15.0  235   53-321    37-288 (373)
166 3mtl_A Cell division protein k 100.0   2E-47 6.9E-52  343.8  12.1  257   54-322     2-281 (324)
167 2ozo_A Tyrosine-protein kinase 100.0 1.9E-46 6.4E-51  364.0  19.7  241   61-331   343-600 (613)
168 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-46 5.8E-51  343.1  18.0  248   48-330    59-340 (365)
169 2v62_A Serine/threonine-protei 100.0 7.1E-47 2.4E-51  343.1  15.2  253   53-327    36-326 (345)
170 1u5q_A Serine/threonine protei 100.0 1.8E-46   6E-51  340.8  17.4  233   54-322    54-305 (348)
171 3qyz_A Mitogen-activated prote 100.0 2.3E-46 7.9E-51  342.1  18.2  258   53-322    26-313 (364)
172 2w5a_A Serine/threonine-protei 100.0 1.3E-46 4.5E-51  330.9  15.9  243   53-324     5-269 (279)
173 2y7j_A Phosphorylase B kinase  100.0   4E-46 1.4E-50  340.7  19.6  242   50-322    90-359 (365)
174 2vgo_A Serine/threonine-protei 100.0 3.1E-46   1E-50  329.6  18.2  234   53-322    13-262 (284)
175 3gxj_A TGF-beta receptor type- 100.0 2.7E-48 9.2E-53  345.5   5.1  252   53-329     2-297 (303)
176 2h8h_A Proto-oncogene tyrosine 100.0 2.6E-47   9E-52  364.9  12.3  252   46-329   259-523 (535)
177 3a7i_A MST3 kinase, serine/thr 100.0 3.9E-46 1.3E-50  332.0  18.9  237   53-323    21-271 (303)
178 2xrw_A Mitogen-activated prote 100.0 6.2E-46 2.1E-50  340.2  20.6  254   53-322    24-318 (371)
179 3byv_A Rhoptry kinase; malaria 100.0 7.2E-47 2.5E-51  347.1  14.4  237   54-328    73-367 (377)
180 4fl3_A Tyrosine-protein kinase 100.0 2.6E-46 8.8E-51  364.1  19.0  241   60-331   375-633 (635)
181 2jii_A Serine/threonine-protei 100.0 6.8E-47 2.3E-51  344.1  14.0  252   53-330    41-337 (352)
182 3q60_A ROP5B; pseudokinase, tr 100.0 5.1E-47 1.7E-51  347.4  13.0  242   53-322    61-352 (371)
183 3an0_A Dual specificity mitoge 100.0 6.4E-47 2.2E-51  342.5  13.1  245   49-322    46-310 (340)
184 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-46 5.9E-51  338.4  15.6  260   50-322    30-318 (329)
185 2buj_A Serine/threonine-protei 100.0 9.5E-47 3.2E-51  338.0  13.9  252   51-328    26-305 (317)
186 4aaa_A Cyclin-dependent kinase 100.0 2.2E-46 7.6E-51  337.9  16.4  258   53-322    24-306 (331)
187 3ll6_A Cyclin G-associated kin 100.0 8.4E-47 2.9E-51  340.6  13.6  254   44-330    18-309 (337)
188 2rku_A Serine/threonine-protei 100.0 5.9E-46   2E-50  329.4  18.6  236   53-322    14-265 (294)
189 2h6d_A 5'-AMP-activated protei 100.0 4.1E-46 1.4E-50  327.3  17.4  235   53-322    10-261 (276)
190 3eb0_A Putative uncharacterize 100.0   4E-46 1.4E-50  342.9  17.5  257   49-322     2-321 (383)
191 3cok_A Serine/threonine-protei 100.0 2.3E-46 7.7E-51  329.4  15.0  237   53-322    10-262 (278)
192 2acx_A G protein-coupled recep 100.0 2.5E-46 8.5E-51  357.3  16.5  242   52-322   182-444 (576)
193 2j0j_A Focal adhesion kinase 1 100.0 6.6E-46 2.3E-50  362.5  19.7  252   48-330   384-652 (656)
194 2ycf_A Serine/threonine-protei 100.0 3.8E-46 1.3E-50  335.0  16.5  239   53-322     9-274 (322)
195 2owb_A Serine/threonine-protei 100.0 5.2E-46 1.8E-50  336.1  17.2  236   53-322    40-291 (335)
196 1phk_A Phosphorylase kinase; g 100.0 1.7E-45 5.8E-50  326.9  20.2  240   52-322    15-283 (298)
197 1x8b_A WEE1HU, WEE1-like prote 100.0 9.6E-46 3.3E-50  326.3  18.4  234   53-322    10-279 (289)
198 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-46 7.4E-51  341.2  14.6  242   53-323    53-322 (355)
199 1u46_A ACK-1, activated CDC42  100.0 2.4E-46 8.1E-51  331.2  14.4  249   53-330    17-285 (291)
200 3nsz_A CK II alpha, casein kin 100.0 1.2E-45 4.1E-50  332.6  19.3  249   53-322    35-319 (330)
201 1j1b_A Glycogen synthase kinas 100.0   6E-46   2E-50  345.6  17.7  253   54-322    54-336 (420)
202 2fst_X Mitogen-activated prote 100.0 2.2E-46 7.4E-51  342.5  14.4  253   53-322    28-311 (367)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 9.6E-46 3.3E-50  362.3  19.8  238   51-322   338-597 (674)
204 3sv0_A Casein kinase I-like; t 100.0 2.6E-45 8.8E-50  345.8  22.0  251   53-330     6-279 (483)
205 2a19_B Interferon-induced, dou 100.0 8.8E-46   3E-50  326.2  17.6  236   53-330    10-275 (284)
206 1ua2_A CAK, cell division prot 100.0   5E-46 1.7E-50  337.6  16.4  261   50-322     6-291 (346)
207 3kvw_A DYRK2, dual specificity 100.0 9.7E-46 3.3E-50  345.0  18.5  189   53-255    96-306 (429)
208 2vwi_A Serine/threonine-protei 100.0 7.9E-47 2.7E-51  336.0  10.6  257   49-322    10-287 (303)
209 3com_A Serine/threonine-protei 100.0 1.5E-45   5E-50  329.8  18.9  239   51-322    26-278 (314)
210 2b9h_A MAP kinase FUS3, mitoge 100.0 7.1E-46 2.4E-50  337.2  16.9  258   53-322    10-305 (353)
211 3mi9_A Cell division protein k 100.0 1.7E-45 5.8E-50  334.7  19.3  260   53-322    16-311 (351)
212 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-45 5.1E-50  351.0  19.2  244   53-322   184-448 (543)
213 2x7f_A TRAF2 and NCK-interacti 100.0 3.3E-46 1.1E-50  335.7  14.0  252   39-322     9-286 (326)
214 2clq_A Mitogen-activated prote 100.0 4.9E-45 1.7E-49  323.3  21.1  240   54-322    22-278 (295)
215 2wtk_C Serine/threonine-protei 100.0 6.4E-45 2.2E-49  324.2  21.5  239   53-322     4-263 (305)
216 3fme_A Dual specificity mitoge 100.0 1.7E-45 5.8E-50  325.5  17.5  242   52-322     5-266 (290)
217 2wei_A Calmodulin-domain prote 100.0 1.3E-45 4.3E-50  326.3  16.4  239   53-322    21-276 (287)
218 3pg1_A Mitogen-activated prote 100.0 5.4E-46 1.8E-50  339.3  14.5  266   44-322    12-316 (362)
219 2j7t_A Serine/threonine-protei 100.0 5.4E-46 1.8E-50  330.7  14.0  240   52-322    17-275 (302)
220 3lm5_A Serine/threonine-protei 100.0 9.5E-46 3.2E-50  333.3  15.3  241   53-322    27-287 (327)
221 1wak_A Serine/threonine-protei 100.0 3.4E-45 1.1E-49  337.5  19.2  256   53-322    36-391 (397)
222 4e7w_A Glycogen synthase kinas 100.0 2.2E-45 7.5E-50  339.1  16.3  254   54-322    40-321 (394)
223 4exu_A Mitogen-activated prote 100.0 1.1E-44 3.9E-49  331.8  20.7  252   53-322    41-323 (371)
224 3e3p_A Protein kinase, putativ 100.0 6.6E-45 2.3E-49  331.6  18.9  267   46-322    15-314 (360)
225 2r3i_A Cell division protein k 100.0 4.6E-45 1.6E-49  324.2  17.2  257   54-322     3-283 (299)
226 3rgf_A Cyclin-dependent kinase 100.0 6.1E-45 2.1E-49  337.4  17.8  261   55-322    21-333 (405)
227 1z57_A Dual specificity protei 100.0   3E-44   1E-48  324.0  21.3  253   53-322    13-328 (339)
228 3coi_A Mitogen-activated prote 100.0 1.1E-44 3.6E-49  329.7  18.5  252   53-322    23-305 (353)
229 2i6l_A Mitogen-activated prote 100.0 3.7E-45 1.3E-49  327.5  15.2  257   53-322    10-305 (320)
230 3cek_A Dual specificity protei 100.0 2.6E-45 8.8E-50  328.2  13.7  252   40-322    14-292 (313)
231 2pml_X PFPK7, Ser/Thr protein  100.0 2.5E-45 8.5E-50  332.9  13.6  255   53-322    30-322 (348)
232 3aln_A Dual specificity mitoge 100.0 4.9E-45 1.7E-49  328.4  15.2  247   51-322    19-285 (327)
233 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-46 1.2E-50  334.6   7.2  257   43-330    22-303 (319)
234 1q8y_A SR protein kinase; tran 100.0 1.2E-44 4.1E-49  331.4  16.9  256   53-322    18-333 (373)
235 1zy4_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49  320.8  16.8  239   53-322     5-283 (303)
236 2vx3_A Dual specificity tyrosi 100.0 1.1E-43 3.7E-48  326.6  22.7  193   51-255    51-265 (382)
237 3fhr_A MAP kinase-activated pr 100.0 1.2E-44 4.1E-49  327.3  15.4  238   53-322    27-287 (336)
238 3a99_A Proto-oncogene serine/t 100.0 5.2E-45 1.8E-49  327.5  11.8  241   40-322    29-293 (320)
239 1blx_A Cyclin-dependent kinase 100.0 2.6E-44 8.9E-49  323.2  16.3  259   52-322     9-296 (326)
240 2eu9_A Dual specificity protei 100.0 2.1E-43 7.2E-48  320.6  21.8  253   53-322    18-333 (355)
241 3qa8_A MGC80376 protein; kinas 100.0 2.8E-44 9.5E-49  346.8  16.3  263   53-328    13-308 (676)
242 2dyl_A Dual specificity mitoge 100.0 2.2E-44 7.5E-49  322.5  13.4  253   39-322    10-283 (318)
243 2iwi_A Serine/threonine-protei 100.0   3E-44   1E-48  321.1  14.0  233   48-322    25-283 (312)
244 3p23_A Serine/threonine-protei 100.0 1.1E-43 3.8E-48  331.1  12.6  238   52-322    22-283 (432)
245 2rio_A Serine/threonine-protei 100.0 5.8E-43   2E-47  326.8  16.2  248   48-322     8-295 (434)
246 2pzi_A Probable serine/threoni 100.0 4.8E-43 1.7E-47  344.6  16.4  231   53-330    79-329 (681)
247 3uqc_A Probable conserved tran 100.0 1.3E-42 4.6E-47  306.9  16.0  220   54-329    31-265 (286)
248 3dzo_A Rhoptry kinase domain;  100.0 2.6E-42 8.9E-47  320.4  13.3  230   55-322    79-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0   2E-41 6.8E-46  301.2  16.3  219   53-322    16-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46  307.5   9.2  233   53-321    19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.4E-35 8.1E-40  283.2   5.3  174   62-248   242-438 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 1.2E-30 4.2E-35  249.1   7.6  175   57-249   339-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.4E-26 4.9E-31  203.5   8.9  144   48-222    84-252 (282)
254 1zth_A RIO1 serine protein kin  99.9   3E-22   1E-26  173.7  11.3  131   55-197    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.8 1.8E-19 6.1E-24  163.0   7.4  132   53-198    94-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 1.1E-12 3.8E-17  113.4   8.9  135   49-194     9-211 (263)
257 3dxp_A Putative acyl-COA dehyd  99.2 3.3E-11 1.1E-15  109.0   9.2  132   58-196    42-248 (359)
258 3sg8_A APH(2'')-ID; antibiotic  99.2 2.2E-11 7.4E-16  107.7   7.0  172   59-249    25-288 (304)
259 1nd4_A Aminoglycoside 3'-phosp  99.2   2E-11 6.9E-16  105.0   6.2  126   53-195    19-213 (264)
260 3r70_A Aminoglycoside phosphot  99.0 4.7E-09 1.6E-13   93.4  12.1  131   55-198    38-239 (320)
261 3tdw_A Gentamicin resistance p  98.5 5.3E-07 1.8E-11   79.5  11.3  125   59-196    24-224 (306)
262 3d1u_A Putative fructosamine-3  98.4   1E-06 3.5E-11   77.0   9.7   68   58-126    19-97  (288)
263 3ovc_A Hygromycin-B 4-O-kinase  98.3 1.9E-06 6.5E-11   77.8   8.6   66   56-127    43-122 (362)
264 4gkh_A Aminoglycoside 3'-phosp  98.2   7E-06 2.4E-10   70.6  11.2  132   50-195    21-222 (272)
265 2olc_A MTR kinase, methylthior  98.2 8.5E-06 2.9E-10   74.4  10.8   66   59-124    35-120 (397)
266 2q83_A YTAA protein; 2635576,   98.2 2.9E-05   1E-09   68.9  14.0  131   60-195    38-251 (346)
267 2yle_A Protein spire homolog 1  98.0 0.00017 5.7E-09   59.3  13.6  100  124-244    33-132 (229)
268 3f7w_A Putative fructosamine-3  97.9 3.7E-05 1.3E-09   66.8   8.4   70   56-126    17-97  (288)
269 3ats_A Putative uncharacterize  97.8 8.2E-05 2.8E-09   66.7   9.9   68   60-127    26-121 (357)
270 2pyw_A Uncharacterized protein  97.7 0.00028 9.5E-09   64.8  11.8   76  165-244   231-312 (420)
271 1zyl_A Hypothetical protein YI  97.6  0.0019 6.4E-08   56.9  15.0  153   39-196     6-223 (328)
272 3dxq_A Choline/ethanolamine ki  97.6 0.00028 9.7E-09   61.6   9.1   62   59-126    23-95  (301)
273 2ppq_A HSK, HK, homoserine kin  97.5  0.0016 5.5E-08   57.2  13.5  152   41-195     4-216 (322)
274 3jr1_A Putative fructosamine-3  97.5 0.00037 1.3E-08   61.3   8.5   64   59-126    41-118 (312)
275 1nw1_A Choline kinase (49.2 KD  97.2  0.0011 3.7E-08   61.0   9.0   65   59-126    78-159 (429)
276 3csv_A Aminoglycoside phosphot  97.1  0.0039 1.3E-07   55.0  11.2   33  165-197   182-218 (333)
277 3c5i_A Choline kinase; choline  97.1  0.0014 4.6E-08   59.0   7.9   66   59-126    38-121 (369)
278 3feg_A Choline/ethanolamine ki  97.0   0.002 6.9E-08   58.1   8.4  134   60-195    56-253 (379)
279 2qg7_A Ethanolamine kinase PV0  96.8  0.0065 2.2E-07   56.3  10.5   65   60-126   114-188 (458)
280 3i1a_A Spectinomycin phosphotr  96.1   0.015 5.3E-07   51.5   8.2   32  165-196   205-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  95.6   0.028 9.7E-07   50.9   7.6   30  165-194   243-278 (401)
282 3mes_A Choline kinase; malaria  94.8    0.12 4.2E-06   47.1   9.4   66   59-126    75-157 (424)
283 3g15_A CK, chetk-alpha, cholin  94.3   0.019 6.5E-07   52.1   2.6   29  167-195   245-279 (401)
284 4ann_A ESSB; membrane protein,  90.6     0.9 3.1E-05   37.1   7.6  108  108-249    43-158 (215)
285 3cxl_A N-chimerin; SH2, RHO-GA  88.2   0.059   2E-06   49.9  -1.4   56   57-115   145-209 (463)
286 4ano_A ESSB; membrane protein,  85.6     1.5 5.2E-05   35.8   5.9  106  108-249    48-163 (219)
287 1cja_A Protein (actin-fragmin   60.5      39  0.0013   29.4   8.4   74  116-196   159-237 (342)
288 2x6h_A GH13170P, VPS34, phosph  39.2      18 0.00062   34.9   3.1   72  117-195   490-575 (696)
289 2fq3_A Transcription regulator  30.4      38  0.0013   23.9   2.8   32  293-324    46-77  (104)
290 4gqc_A Thiol peroxidase, perox  27.2      50  0.0017   25.0   3.4   25  307-331   138-162 (164)
291 2y3a_A Phosphatidylinositol-4,  26.8      36  0.0012   34.7   3.1   25  171-195   940-964 (1092)
292 3ls8_A Phosphatidylinositol 3-  25.8      42  0.0014   31.9   3.1   46  143-195   454-501 (614)
293 2wxf_A Phosphatidylinositol-4,  24.1      31  0.0011   34.6   2.0   25  171-195   788-812 (940)
294 1e7u_A Phosphatidylinositol 3-  23.0      35  0.0012   34.4   2.1   25  171-195   804-828 (961)
295 3oja_A Leucine-rich immune mol  21.3     9.9 0.00034   35.0  -2.1   22   94-115   323-344 (487)

No 1  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=3.7e-62  Score=433.08  Aligned_cols=257  Identities=20%  Similarity=0.314  Sum_probs=203.0

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE----------EE
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL----------IV  117 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~----------lv  117 (332)
                      |++..+++.+.++||+|+||+||+|++.+ .||||+++... +....+.|.+|+.++++++|||||++          ||
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iV  109 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIV  109 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEE
Confidence            34556778889999999999999999865 59999987543 44557889999999999999999998          89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      ||||++|+|.+++....    ..+++.++..|+.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+..
T Consensus       110 mEy~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             EECCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred             EEcCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence            99999999999997541    46999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      .............||+.|||||++.+    .|+.++|||||||++|||+||+.||..........     ..+....   
T Consensus       183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~-----~~~~~~~---  254 (307)
T 3omv_A          183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII-----FMVGRGY---  254 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-----HHHHTTC---
T ss_pred             ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH-----HHHhcCC---
Confidence            54433333356789999999999853    68999999999999999999999998655432211     1111000   


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                                ..+.....+..+++.+.+|+.+||+.||++|||+.||++.|+.|..++
T Consensus       255 ----------~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          255 ----------ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             ----------CCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             ----------CCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence                      000001112245578999999999999999999999999999887653


No 2  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1e-61  Score=429.87  Aligned_cols=251  Identities=20%  Similarity=0.270  Sum_probs=205.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      .++|.+.+.||+|+||+||+|++       ++..||||+++... ....+.|.+|+.+|++++|||||++          
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            35688889999999999999987       36789999998654 3447889999999999999999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhc--------ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCe
Q 038681          116 -IVFESVQIGTLADRIHHHCE--------QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA  186 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~  186 (332)
                       ||||||++|+|.+++.....        .....+++.+++.++.||+.||.|||   +++|+||||||+|||++.++.+
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~  167 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLV  167 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcE
Confidence             89999999999999986521        12246999999999999999999999   8999999999999999999999


Q ss_pred             EEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHh
Q 038681          187 KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       187 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~  264 (332)
                      ||+|||+|+...............||+.|||||++.+ .|+.++|||||||++|||+| |+.||......+...      
T Consensus       168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~------  241 (299)
T 4asz_A          168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE------  241 (299)
T ss_dssp             EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH------
T ss_pred             EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH------
Confidence            9999999987765544333345679999999999987 89999999999999999999 899998765433211      


Q ss_pred             hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          265 RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .+              ....   ..+.+..+++++.+|+.+||+.||++|||+++|++.|+.+.++
T Consensus       242 ~i--------------~~~~---~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          242 CI--------------TQGR---VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HH--------------HHTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HH--------------HcCC---CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            11              0000   0111224557899999999999999999999999999998764


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7.6e-61  Score=429.91  Aligned_cols=251  Identities=19%  Similarity=0.252  Sum_probs=197.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      ..+|.+.++||+|+||.||+|++       ++..||||+++... ....+.|.+|+.+|++++|||||++          
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~  118 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL  118 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            34677788999999999999986       36789999997654 4447889999999999999999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhcc----------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC
Q 038681          116 -IVFESVQIGTLADRIHHHCEQ----------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS  184 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~  184 (332)
                       ||||||++|+|.+++......          ...++++.+++.|+.||+.||+|||   +++||||||||+|||++.++
T Consensus       119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~  195 (329)
T 4aoj_A          119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGL  195 (329)
T ss_dssp             EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTT
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCC
Confidence             899999999999999864221          1246999999999999999999999   89999999999999999999


Q ss_pred             CeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHH
Q 038681          185 DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~  262 (332)
                      .+||+|||+|+...............||+.|||||++.+ .++.++|||||||++|||+| |+.||......+...    
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~----  271 (329)
T 4aoj_A          196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID----  271 (329)
T ss_dssp             EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH----
T ss_pred             cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH----
Confidence            999999999987755443333345679999999999988 89999999999999999999 899998765433211    


Q ss_pred             HhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                        .+              ....   ..+.+..+++++.+|+.+||+.||++|||++||++.|+.+.++
T Consensus       272 --~i--------------~~g~---~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          272 --CI--------------TQGR---ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             --HH--------------HHTC---CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             --HH--------------HcCC---CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence              11              0000   1111224457899999999999999999999999999998764


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=4.6e-61  Score=427.51  Aligned_cols=248  Identities=19%  Similarity=0.295  Sum_probs=202.5

Q ss_pred             cCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      +++++.++||+|+||+||+|.+       +++.||||++.........+.|.+|+.++++++|||||++           
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            3466678999999999999987       4578999999876665557889999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhc-----------ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC
Q 038681          116 IVFESVQIGTLADRIHHHCE-----------QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS  184 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~  184 (332)
                      ||||||++|+|.++|.....           .....+++..++.++.|||.||+|||   +++||||||||+|||++.++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence            89999999999999975421           11246999999999999999999999   99999999999999999999


Q ss_pred             CeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHH
Q 038681          185 DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~  262 (332)
                      .+||+|||+|+...............||+.|||||++.+ .|+.++|||||||++|||+| |..||.+....+..     
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~-----  257 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV-----  257 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH-----
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH-----
Confidence            999999999987654433322345689999999999886 99999999999999999998 89999876543321     


Q ss_pred             HhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                       ..+..               ..  ..+.+..++..+.+|+.+||+.||++|||++||++.|++.
T Consensus       258 -~~i~~---------------~~--~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          258 -EMIRN---------------RQ--VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             -HHHHT---------------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             -HHHHc---------------CC--CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence             11110               00  1112234557899999999999999999999999999864


No 5  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=6.5e-60  Score=415.73  Aligned_cols=233  Identities=19%  Similarity=0.328  Sum_probs=192.7

Q ss_pred             CCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE---------------EEE
Q 038681           57 DEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL---------------IVF  118 (332)
Q Consensus        57 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~---------------lv~  118 (332)
                      ...++||+|+||+||+|.+  ++..||+|++.... .....+.|.+|+.++++++|||||++               |||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5567899999999999999  78899999997543 34446789999999999999999986               799


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeeCC-CCCeEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNILFNE-QSDAKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~  195 (332)
                      |||++|+|.+++.+.     ..+++..+..++.||+.||+|||   +++  |+||||||+|||++. ++.+||+|||+|+
T Consensus       109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            999999999999876     67999999999999999999999   877  999999999999974 7999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......    .+.+||+.|||||++.+.|+.++|||||||++|||+||+.||........     ....+.....    
T Consensus       181 ~~~~~~~----~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----~~~~i~~~~~----  247 (290)
T 3fpq_A          181 LKRASFA----KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGVK----  247 (290)
T ss_dssp             GCCTTSB----EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTCC----
T ss_pred             eCCCCcc----CCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----HHHHHHcCCC----
Confidence            6544332    45689999999999988999999999999999999999999975443221     1111111100    


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                  +...+...++++.+||.+||+.||++|||++|+++
T Consensus       248 ------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          248 ------------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ------------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------------CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        00111123367899999999999999999999975


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1e-60  Score=429.17  Aligned_cols=236  Identities=18%  Similarity=0.285  Sum_probs=198.5

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      ..|+..++||+|+||.||+|.+  +|+.||||++....... .+.+.+|+.+|++++|||||++           |||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            4599999999999999999999  79999999997654332 4668899999999999999998           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCC
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG  200 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  200 (332)
                      |+||+|.+++..      ..+++.++..++.||+.||+|||   +++|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus       153 ~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  223 (346)
T 4fih_A          153 LEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  223 (346)
T ss_dssp             CTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             CCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence            999999999975      36999999999999999999999   999999999999999999999999999999877654


Q ss_pred             CceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhh
Q 038681          201 ETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDS  279 (332)
Q Consensus       201 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (332)
                      ...  ..+.+||+.|||||++.+ .|+.++|||||||++|||++|..||...+......      .+.            
T Consensus       224 ~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~------~i~------------  283 (346)
T 4fih_A          224 VPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK------MIR------------  283 (346)
T ss_dssp             SCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHH------------
T ss_pred             CCc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH------HHH------------
Confidence            332  246789999999999987 89999999999999999999999998755433211      110            


Q ss_pred             hhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          280 IIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                         .............++++.+||.+||+.||++|||++|+++
T Consensus       284 ---~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          284 ---DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             ---HSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---cCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               0111111222345578999999999999999999999875


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.1e-60  Score=429.71  Aligned_cols=238  Identities=21%  Similarity=0.290  Sum_probs=193.9

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ++|++.+.||+|+||+||+|++  +|+.||||++.... .....+.+.+|+.++++|+|||||++           ||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999998  79999999997653 34457789999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      ||+||+|.+++....   ...+++..++.++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||+|+....
T Consensus       104 y~~gg~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             CCTTCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             CCCCCcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            999999999997642   145799999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                      ....  ....+||+.|||||++.+ .|+.++|||||||++|||++|+.||...+.....     .....           
T Consensus       178 ~~~~--~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~-----~~i~~-----------  239 (350)
T 4b9d_A          178 TVEL--ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV-----LKIIS-----------  239 (350)
T ss_dssp             HHHH--HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-----HHHHH-----------
T ss_pred             Cccc--ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-----HHHHc-----------
Confidence            3221  245689999999999998 8999999999999999999999999876543321     11111           


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                          ...+   +.+...+.++.+||.+||+.||++|||++|+++
T Consensus       240 ----~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          240 ----GSFP---PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ----TCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----CCCC---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                1110   111234578999999999999999999999986


No 8  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.1e-60  Score=432.24  Aligned_cols=262  Identities=18%  Similarity=0.336  Sum_probs=218.1

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEeC-------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC-CCcceE
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQ-------KRSISLMKYNGNRNQHALEWCINHIVYASRMSH-KHIIKL  115 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~~  115 (332)
                      ++.++|++..++|++.+.||+|+||.||+|.+.       ++.||||.+.........+.|.+|+.+|.+++| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            567788888899999999999999999999972       367999999887776667889999999999975 899998


Q ss_pred             ------------EEEEeccCCChHHHHhhhhcc-----------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 038681          116 ------------IVFESVQIGTLADRIHHHCEQ-----------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD  172 (332)
Q Consensus       116 ------------lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D  172 (332)
                                  ||||||++|+|.++|+.....           ....+++..++.++.|||.||+|||   +++|||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence                        899999999999999865321           1235899999999999999999999   99999999


Q ss_pred             CCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCC
Q 038681          173 MKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDH  250 (332)
Q Consensus       173 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~  250 (332)
                      |||+|||++.++.+||+|||+|+...............||+.|||||++.+ .|+.++|||||||++|||+| |..||.+
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999998766554444456789999999999987 89999999999999999998 8999987


Q ss_pred             CCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          251 VSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .......     ...+.               ...  ..+.+..+++++.+|+.+||+.||++|||++||++.|+.++++
T Consensus       291 ~~~~~~~-----~~~i~---------------~g~--~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          291 VKIDEEF-----CRRLK---------------EGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             CCCSHHH-----HHHHH---------------HTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHH-----HHHHH---------------cCC--CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            6543221     11111               110  1111223457899999999999999999999999999999875


No 9  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5.4e-61  Score=424.90  Aligned_cols=236  Identities=19%  Similarity=0.292  Sum_probs=200.2

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ++|++.+.||+|+||+||+|++  +++.||||++....  .....+.+.+|+++|++++|||||++           |||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5699999999999999999999  89999999997542  23336789999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      |||+||+|.+++...     +.+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus       112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            999999999999876     67999999999999999999999   9999999999999999999999999999999876


Q ss_pred             CCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      .........+.+||+.|||||++.+ .|+.++|||||||++|||++|..||...+.....      ..+           
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~------~~i-----------  246 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF------AKI-----------  246 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-----------
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHH-----------
Confidence            5444333357789999999999987 8999999999999999999999999865443221      111           


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVA  321 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl  321 (332)
                         ......    .+...++++.+||.+||+.||++|||++|++
T Consensus       247 ---~~~~~~----~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          247 ---IKLEYD----FPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             ---HHTCCC----CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             ---HcCCCC----CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence               111111    1123447899999999999999999999864


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.9e-60  Score=424.95  Aligned_cols=243  Identities=16%  Similarity=0.196  Sum_probs=198.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .+.|.+.++||+|+||.||+|++  +|+.||||++.....      ..+|+.++++++|||||++           ||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            34577788899999999999999  799999999976532      2479999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC-CeEEeecCCccccC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DAKLFDFSLSLSIP  198 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~  198 (332)
                      ||+||+|.+++...     +.+++..+..++.||+.||+|||   +++|+||||||+|||++.+| .+||+|||+|+...
T Consensus       131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~  202 (336)
T 4g3f_A          131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ  202 (336)
T ss_dssp             CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred             ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence            99999999999876     67999999999999999999999   99999999999999999988 59999999998775


Q ss_pred             CCCce---eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          199 DGETH---IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       199 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      .....   ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..........      .+......+.
T Consensus       203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~------~i~~~~~~~~  276 (336)
T 4g3f_A          203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL------KIASEPPPIR  276 (336)
T ss_dssp             -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH------HHHHSCCGGG
T ss_pred             CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HHHcCCCCch
Confidence            43321   11234679999999999998 89999999999999999999999998765433211      1111111111


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                     ..+..+++.+.+||.+||+.||.+|||+.|+++.|...+++
T Consensus       277 ---------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          277 ---------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             ---------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence                           11124457899999999999999999999999999887764


No 11 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.3e-59  Score=410.43  Aligned_cols=233  Identities=25%  Similarity=0.351  Sum_probs=182.1

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ++|++.+.||+|+||+||+|.+  +|+.||||++....  .....+.+.+|+.++++++|||||++           |||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999998  79999999997653  23336779999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||| +|+|.+++...     ..+++.++..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+...
T Consensus        93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            999 67999999876     67999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .....   .+.+||+.|||||++.+ . ++.++|||||||++|||+||+.||...+....      ...+......    
T Consensus       164 ~~~~~---~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~------~~~i~~~~~~----  230 (275)
T 3hyh_A          164 DGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL------FKNISNGVYT----  230 (275)
T ss_dssp             --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHTCCC----
T ss_pred             CCCcc---CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHcCCCC----
Confidence            54322   45789999999999987 4 46899999999999999999999986543221      1111111111    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .+...++++.+|+.+||+.||++|||++|+++
T Consensus       231 --------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          231 --------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             --------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                          11233478899999999999999999999987


No 12 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.6e-59  Score=416.62  Aligned_cols=261  Identities=18%  Similarity=0.278  Sum_probs=196.2

Q ss_pred             cCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------lv~  118 (332)
                      .+|.+.+.||+|+||+||+|+++|+.||||++......  ...+..|+..+.+++|||||++               |||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            35778899999999999999999999999999754322  2223456666778999999987               899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC--------CeeecCCCCCCeeeCCCCCeEEee
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR--------PIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~--------~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                      |||++|+|.+++...      .+++..+..++.|++.||+|||   ++        +|+||||||+|||++.++++||+|
T Consensus        81 Ey~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH---~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D  151 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLH---MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             ECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             cCCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence            999999999999764      6899999999999999999999   65        999999999999999999999999


Q ss_pred             cCCccccCCCCcee--eccccccCCCcccccccCC-------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHH
Q 038681          191 FSLSLSIPDGETHI--ELDSVVGTTGFIAPENFTT-------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEE  261 (332)
Q Consensus       191 fg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~  261 (332)
                      ||+|+.........  ......||+.|||||++.+       .++.++|||||||++|||+||..||..........   
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~---  228 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY---  228 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT---
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc---
Confidence            99998765543322  1134579999999999865       36789999999999999999998886544322111   


Q ss_pred             HHhhhhccccchhhhhhhhhhcccCCCC---CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          262 NVKRLSGQNCRFKEMVDSIIIEDKSCTC---TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                        ............+..........+..   ......+..+.+|+.+||+.||++||||.||++.|++|.++
T Consensus       229 --~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          229 --YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             --TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --hhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence              00001111112221111111111111   11235667899999999999999999999999999998753


No 13 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=2.6e-59  Score=430.02  Aligned_cols=236  Identities=18%  Similarity=0.281  Sum_probs=198.7

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      +.|++.++||+|+||.||+|.+  +|+.||||++....... .+.+.+|+.+|++++|||||++           |||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            4699999999999999999999  79999999997654433 5678999999999999999998           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCC
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG  200 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  200 (332)
                      |+||+|.+++..      ..+++.++..++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus       230 ~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~  300 (423)
T 4fie_A          230 LEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  300 (423)
T ss_dssp             CTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred             CCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence            999999999965      36999999999999999999999   999999999999999999999999999999877554


Q ss_pred             CceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhh
Q 038681          201 ETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDS  279 (332)
Q Consensus       201 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (332)
                      ...  ..+.+||+.|||||++.+ .|+.++|||||||++|||++|..||.+........      .+..           
T Consensus       301 ~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~------~i~~-----------  361 (423)
T 4fie_A          301 VPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK------MIRD-----------  361 (423)
T ss_dssp             CCC--BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHH-----------
T ss_pred             Ccc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH------HHHc-----------
Confidence            332  256789999999999987 89999999999999999999999998655433211      1100           


Q ss_pred             hhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          280 IIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                          ............++++.+||.+||+.||++|||+.|+++
T Consensus       362 ----~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          362 ----NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             ----SCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                000111112234578999999999999999999999976


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=5.3e-59  Score=412.00  Aligned_cols=235  Identities=21%  Similarity=0.272  Sum_probs=187.5

Q ss_pred             cCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      ++|++.+.||+|+||+||+|+.     +++.||||++..... ......+.+|+.++++++|||||++           |
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5699999999999999999987     467899999976432 2224468899999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      |||||+||+|.+++.+.     ..+++.++..++.||+.||+|||   +++|+||||||+|||++.+|.+||+|||+|+.
T Consensus       104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            99999999999999876     67999999999999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......  ..+.+||+.|||||++.+ .|+.++|||||||++|||+||+.||...+..+...      .+         
T Consensus       176 ~~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~------~i---------  238 (304)
T 3ubd_A          176 SIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT------MI---------  238 (304)
T ss_dssp             -----CC--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HH---------
T ss_pred             ccCCCcc--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHH------HH---------
Confidence            5443322  146789999999999987 89999999999999999999999998765433211      11         


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM-----VDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~  322 (332)
                           .....    ..+...++++.+||.+||+.||++|||+     +|+++
T Consensus       239 -----~~~~~----~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          239 -----LKAKL----GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             -----HHCCC----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             -----HcCCC----CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                 11111    1112345789999999999999999985     56654


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.2e-57  Score=402.67  Aligned_cols=239  Identities=21%  Similarity=0.348  Sum_probs=183.1

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------------  115 (332)
                      ++|++.+.||+|+||+||+|++  +++.||||++.........+.+.+|+.+|++++|||||++                
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4589999999999999999998  7999999999877666667889999999999999999985                


Q ss_pred             -------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEE
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  188 (332)
                             ||||||++|+|.+++.....  ....++..++.++.||++||+|||   +++|+||||||+|||++.++.+||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEE
Confidence                   79999999999999986521  134567789999999999999999   999999999999999999999999


Q ss_pred             eecCCccccCCCCce----------eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchh
Q 038681          189 FDFSLSLSIPDGETH----------IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRF  257 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~  257 (332)
                      +|||+|+........          ....+.+||+.|||||++.+ .|+.++|||||||++|||++   ||.....  ..
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~--~~  234 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME--RV  234 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--HH
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--HH
Confidence            999999876543221          11234579999999999998 89999999999999999996   7753211  00


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .   .......  ..++               +.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       235 ~---~~~~~~~--~~~p---------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          235 R---TLTDVRN--LKFP---------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             H---HHHHHHT--TCCC---------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H---HHHHHhc--CCCC---------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0   1111110  0111               111234466789999999999999999999986


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=4e-55  Score=402.29  Aligned_cols=258  Identities=16%  Similarity=0.253  Sum_probs=197.6

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      ++|++.+.||+|+||+||+|.+  +|+.||||++..... ....+.+.+|+.+|++++|||||++               
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4699999999999999999999  799999999976543 3446778999999999999999986               


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        ||||||+ |+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl  204 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM  204 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence              8999996 6899999765     67999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCc--eeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          194 SLSIPDGET--HIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       194 a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      |+.+.....  .....+.+||+.|+|||++.+  .++.++||||+||++|||++|+.||.+.+..+....  +.......
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~--I~~~~g~p  282 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL--IMMVLGTP  282 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHH--HHHHHCCC
T ss_pred             eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHH--HHHhcCCC
Confidence            987644321  112246789999999999876  579999999999999999999999987765443221  11111111


Q ss_pred             ccchhhhh-----hhhhhcccCCCCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          270 NCRFKEMV-----DSIIIEDKSCTCTG----KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       270 ~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ........     ...+..........    .+..++++.+||.+||+.||++|||+.|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            11110000     00000000000000    0123578899999999999999999999875


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.2e-53  Score=388.43  Aligned_cols=187  Identities=21%  Similarity=0.324  Sum_probs=160.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE----------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL----------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~----------  115 (332)
                      ..+.|++.+.||+|+||+||+|++     +++.||+|++.....   ..++.+|+.+|..+ +|||||++          
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            357799999999999999999986     467899999876543   45678999999998 69999987          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC-CCeEEeecCC
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ-SDAKLFDFSL  193 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~  193 (332)
                       ||||||++|+|.+++.        .+++.++..++.||+.||+|||   ++||+||||||+|||++.+ +.+||+|||+
T Consensus        96 ~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence             8999999999999983        4899999999999999999999   9999999999999999876 7999999999


Q ss_pred             ccccCCCCce--------------------------eeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCC
Q 038681          194 SLSIPDGETH--------------------------IELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQ  245 (332)
Q Consensus       194 a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~  245 (332)
                      |+........                          ....+.+||+.|+|||++.+  .|+.++||||+||++|||++|+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            9865433210                          01134579999999999976  5899999999999999999999


Q ss_pred             ccCCCCC
Q 038681          246 EVSDHVS  252 (332)
Q Consensus       246 ~p~~~~~  252 (332)
                      .||....
T Consensus       245 ~Pf~~~~  251 (361)
T 4f9c_A          245 YPFYKAS  251 (361)
T ss_dssp             SSSSCCS
T ss_pred             CCCCCCC
Confidence            9996544


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.3e-53  Score=407.20  Aligned_cols=239  Identities=17%  Similarity=0.232  Sum_probs=199.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|++.+.||+|+||.||+|.+  +|+.||+|.+...... ..+.+.+|+.+|+.++|||||++           ||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~-~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh-hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            36799999999999999999999  8999999999765433 36778999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC--CCeEEeecCCcccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--SDAKLFDFSLSLSI  197 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfg~a~~~  197 (332)
                      ||+||+|.+++....    ..+++.++..++.||+.||.|||   +++|+||||||+|||++.+  +.+||+|||+|+.+
T Consensus       235 ~~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          235 FMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             CCCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             ecCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            999999999996531    46999999999999999999999   9999999999999999854  89999999999987


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......   ...+||+.|||||++.+ .|+.++|||||||++|||++|..||.+....+...      .+...       
T Consensus       308 ~~~~~~---~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~------~i~~~-------  371 (573)
T 3uto_A          308 DPKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR------NVKSC-------  371 (573)
T ss_dssp             CTTSEE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------HHHTT-------
T ss_pred             cCCCce---eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH------HHHhC-------
Confidence            665433   45689999999999998 89999999999999999999999998765443211      11111       


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             ....+.......++++.+||.+||+.||.+|||+.|+++
T Consensus       372 -------~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          372 -------DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             -------CCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   111111111234578999999999999999999999986


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5.5e-53  Score=404.93  Aligned_cols=237  Identities=19%  Similarity=0.298  Sum_probs=191.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHH---HHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCIN---HIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~---E~~~l~~l~H~nIv~~----------  115 (332)
                      .++|++.+.||+|+||.||+|++  +|+.||||++.+...  ......+.+   ++.+++.++|||||++          
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            46799999999999999999999  899999999965321  111233334   4566677799999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       ||||||+||+|.++|...     +.+++..+..++.||+.||+|||   ++|||||||||+|||++.+|.+||+|||+|
T Consensus       268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA  339 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEeccccee
Confidence             899999999999999876     67999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccC-C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFT-T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      +.......    .+.+||+.|||||++. + .|+.++|||||||++|||++|..||..........   ......     
T Consensus       340 ~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~---i~~~i~-----  407 (689)
T 3v5w_A          340 CDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTL-----  407 (689)
T ss_dssp             EECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH---HHHHHH-----
T ss_pred             eecCCCCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhhc-----
Confidence            87765443    4678999999999996 4 79999999999999999999999997644332211   111111     


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT-----MVDVAK  322 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~  322 (332)
                               ....    ..+...++++.+||.+||+.||.+|++     ++||++
T Consensus       408 ---------~~~~----~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          408 ---------TMAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             ---------HCCC----CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             ---------CCCC----CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                     1111    111234578999999999999999998     677754


No 20 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=4.2e-50  Score=358.20  Aligned_cols=279  Identities=25%  Similarity=0.403  Sum_probs=224.8

Q ss_pred             CCCcccccHHHHHHHhcCCCCC------CccccCCCceEEEEEeCCeeEEEEEEcCCC---ChhhHHHHHHHHHHHHhhc
Q 038681           38 YNPYRIFSAEELRIATNNYDEQ------NIVLEDPFRKLYKGFWQKRSISLMKYNGNR---NQHALEWCINHIVYASRMS  108 (332)
Q Consensus        38 ~~~~~~~~~~el~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~  108 (332)
                      ......|+..++...+++|...      +.||+|+||.||+|.+++..||+|++....   .....+.+.+|+.++++++
T Consensus         9 ~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A            9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             --CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            4467889999999999999877      899999999999999999999999997642   2344678999999999999


Q ss_pred             CCCcceE-----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 038681          109 HKHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTN  177 (332)
Q Consensus       109 H~nIv~~-----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N  177 (332)
                      ||||+++           +||||+++|+|.+++.....  ...+++..++.++.||+.||.|||   +++|+||||||+|
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~N  163 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSAN  163 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGG
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHH
Confidence            9999998           89999999999999975422  246999999999999999999999   9999999999999


Q ss_pred             eeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchh
Q 038681          178 ILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRF  257 (332)
Q Consensus       178 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~  257 (332)
                      |+++.++.+||+|||++................||+.|+|||++.+.++.++|||||||++|+|++|..||.........
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  243 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL  243 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence            99999999999999999876654433333456799999999999888899999999999999999999999865543321


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .  ............+.+.++..+       .......+..+.+++.+||+.||.+|||+.+|++.|+++..+
T Consensus       244 ~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          244 L--DIKEEIEDEEKTIEDYIDKKM-------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             T--HHHHHHHTTSCCHHHHSCSSC-------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             H--HHHHHhhhhhhhhhhhccccc-------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence            1  111122222222333322211       122346778899999999999999999999999999998653


No 21 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2.9e-51  Score=368.24  Aligned_cols=277  Identities=28%  Similarity=0.417  Sum_probs=217.6

Q ss_pred             cccccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----
Q 038681           41 YRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----  115 (332)
Q Consensus        41 ~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----  115 (332)
                      ...++..++...+++|.+.+.||+|+||.||+|.+ +++.||||++...... ..+.+.+|+.+++.++||||+++    
T Consensus        26 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~  104 (321)
T 2qkw_B           26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ-GIEEFETEIETLSFCRHPHLVSLIGFC  104 (321)
T ss_dssp             ----CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS-HHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred             ceeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH-HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34566667777889999999999999999999999 7899999998766443 36789999999999999999998    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEE
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  188 (332)
                             +||||+++|+|.+++..... ....+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+||
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl  180 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKI  180 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEE
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEE
Confidence                   89999999999999976421 1235899999999999999999999   899999999999999999999999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      +|||+++...............||+.|+|||++.+ .++.++|||||||++|||++|+.||.................. 
T Consensus       181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~-  259 (321)
T 2qkw_B          181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-  259 (321)
T ss_dssp             CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH-
T ss_pred             eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc-
Confidence            99999986544332222244568999999999876 8999999999999999999999999765543332211111000 


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      .....+...+++      ..........+..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       260 ~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          260 HNNGQLEQIVDP------NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HTTTCCCSSSSS------SCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccccHHHhcCh------hhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            011111111111      11223345788899999999999999999999999999998875


No 22 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.9e-51  Score=368.52  Aligned_cols=264  Identities=21%  Similarity=0.303  Sum_probs=207.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------l  116 (332)
                      ..++|.+.+.||+|+||.||+|.+.++.||||++.....  ....+.+|+.++.+++||||+++               +
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK--QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecCch--HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            356799999999999999999999999999999976532  23456679999999999999987               7


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC----------CeeecCCCCCCeeeCCCCCe
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR----------PIVYRDMKPTNILFNEQSDA  186 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~----------~ivH~Dlkp~Nill~~~~~~  186 (332)
                      ||||+++|+|.+++...      .+++..++.++.||+.||.|||   +.          +|+||||||+|||++.++.+
T Consensus       100 v~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~  170 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA  170 (322)
T ss_dssp             EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred             EEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence            99999999999999764      5999999999999999999999   88          99999999999999999999


Q ss_pred             EEeecCCccccCCCCceeeccccccCCCcccccccCC------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhH
Q 038681          187 KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE  260 (332)
Q Consensus       187 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~  260 (332)
                      ||+|||+++...............||+.|+|||++.+      .++.++|||||||++|||++|+.||..........+.
T Consensus       171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~  250 (322)
T 3soc_A          171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE  250 (322)
T ss_dssp             EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred             EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence            9999999987665443333345679999999999875      3566899999999999999999999876544332211


Q ss_pred             HHHhhhhccccchhhhhhhhhhcccCCC---CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          261 ENVKRLSGQNCRFKEMVDSIIIEDKSCT---CTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      ..    .........+............   .......+..+.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus       251 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          251 EE----IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HH----HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hh----hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11    0111122222221111111111   111235667899999999999999999999999999999764


No 23 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.1e-50  Score=365.00  Aligned_cols=278  Identities=28%  Similarity=0.466  Sum_probs=217.5

Q ss_pred             CCCCcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE
Q 038681           37 KYNPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL  115 (332)
Q Consensus        37 ~~~~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~  115 (332)
                      .....+.|+..++....++|.+.+.||+|+||.||+|.+ +++.||||++...........+.+|+.++++++||||+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            345678899999999999999999999999999999998 7899999999876544334468999999999999999987


Q ss_pred             -----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC---CeeecCCCCCCeeeC
Q 038681          116 -----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR---PIVYRDMKPTNILFN  181 (332)
Q Consensus       116 -----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~---~ivH~Dlkp~Nill~  181 (332)
                                 +||||+++|+|.+++..... ....+++..+..++.|++.||.|||   +.   +|+||||||+|||++
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~  168 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLD  168 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEEC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEEC
Confidence                       89999999999999986532 2245999999999999999999999   77   999999999999999


Q ss_pred             CCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhH
Q 038681          182 EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE  260 (332)
Q Consensus       182 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~  260 (332)
                      .++.+||+|||+++.......... ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.......... .
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~  246 (326)
T 3uim_A          169 EEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-V  246 (326)
T ss_dssp             TTCCEEECCCSSCEECCSSSSCEE-CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC-S
T ss_pred             CCCCEEeccCccccccCccccccc-ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc-h
Confidence            999999999999987754443322 45569999999999876 88999999999999999999999996321111000 0


Q ss_pred             HHHhhhhc--cccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 038681          261 ENVKRLSG--QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQ  326 (332)
Q Consensus       261 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~  326 (332)
                      ....+...  ....+....+..      .........+..+.+++.+||+.||.+|||+.+|++.|+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          247 MLLDWVKGLLKEKKLEALVDVD------LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             BHHHHHTTTTSSCCSTTSSCTT------CTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hHHHHHHHHhhchhhhhhcChh------hccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            01111111  111112222211      1223345778899999999999999999999999999974


No 24 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.1e-50  Score=362.67  Aligned_cols=259  Identities=23%  Similarity=0.353  Sum_probs=199.8

Q ss_pred             cccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           43 IFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        43 ~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      .++..++....++|++.+.||+|+||.||+|.+++..||||++.... .....+.+.+|+.++++++||||+++      
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ  105 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            45556666778889999999999999999999999999999997664 34446789999999999999999998      


Q ss_pred             -----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeeCCCCCeEE
Q 038681          116 -----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl  188 (332)
                           +||||+++|+|.+++.....  ...+++..++.++.||+.||+|||   +.+  |+||||||+|||++.++.+||
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL  180 (309)
T 3p86_A          106 PPNLSIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKV  180 (309)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEE
Confidence                 89999999999999986521  124999999999999999999999   889  999999999999999999999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      +|||+++........  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........   .... .
T Consensus       181 ~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~---~~~~-~  254 (309)
T 3p86_A          181 CDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA---AVGF-K  254 (309)
T ss_dssp             CCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHHH-S
T ss_pred             CCCCCCccccccccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHh-c
Confidence            999999765443221  145679999999999988 78999999999999999999999998665432211   0000 0


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      ..                  ....+...++.+.+|+.+||+.||.+|||+.++++.|+.+.++
T Consensus       255 ~~------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          255 CK------------------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CC------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CC------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            00                  0111123447799999999999999999999999999998764


No 25 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.9e-50  Score=366.24  Aligned_cols=238  Identities=24%  Similarity=0.314  Sum_probs=189.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ..++|.+.+.||+|+||.||+|.+  +++.||||++.........+.+.+|+.++++++||||+++           +||
T Consensus         8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~   87 (347)
T 3zgw_A            8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL   87 (347)
T ss_dssp             TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence            357899999999999999999998  8999999999876544445678999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        88 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~  159 (347)
T 3zgw_A           88 EYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK  159 (347)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence            999999999999876     57999999999999999999999   9999999999999999999999999999987655


Q ss_pred             CCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ...... .....||+.|+|||++.+ . ++.++|||||||++|+|++|..||.........      ..+.         
T Consensus       160 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~------~~i~---------  223 (347)
T 3zgw_A          160 GNKDYH-LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY------KKIM---------  223 (347)
T ss_dssp             -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHH---------
T ss_pred             CCCCcc-ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH------HHHH---------
Confidence            433221 245679999999999987 4 589999999999999999999999865433221      1111         


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                           .....    .+...++.+.+|+.+||+.||.+|||+.|+++
T Consensus       224 -----~~~~~----~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          224 -----RGKYD----VPKWLSPSSILLLQQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             -----HTCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----cCCCC----CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence                 11111    11123467889999999999999999999986


No 26 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=4e-50  Score=361.83  Aligned_cols=236  Identities=21%  Similarity=0.317  Sum_probs=198.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      ..++|.+.+.||+|+||.||+|.+  +|+.||||++.... .....+.+.+|+.+++.++||||+++           +|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            356899999999999999999998  89999999997653 34456788999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||++...
T Consensus        93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred             EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence            9999999999999876     57999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CC-ChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~-~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......   ....||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.........      ..+         
T Consensus       165 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------~~i---------  226 (328)
T 3fe3_A          165 TVGGKL---DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR------ERV---------  226 (328)
T ss_dssp             SSSCGG---GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH---------
T ss_pred             CCCCcc---ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH------HHH---------
Confidence            554432   45689999999999987 44 58999999999999999999999876543221      111         


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                           .......    +...+.++.+|+.+||+.||.+|||++|+++
T Consensus       227 -----~~~~~~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          227 -----LRGKYRI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             -----HHCCCCC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             -----HhCCCCC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                 1111111    1123467899999999999999999999975


No 27 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5.8e-50  Score=356.03  Aligned_cols=237  Identities=19%  Similarity=0.314  Sum_probs=197.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++....... .+.+.+|+.++++++||||+++           +|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            46799999999999999999998  88999999987654433 5778999999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++...      .+++..+..++.|++.||.|||   ++||+||||||+|||++.++.+||+|||++.....
T Consensus        98 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (297)
T 3fxz_A           98 YLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (297)
T ss_dssp             CCTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            99999999999764      5899999999999999999999   89999999999999999999999999999987655


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                      ....  .....||+.|+|||++.+ .++.++|||||||++|||++|..||..........     ......         
T Consensus       169 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~---------  232 (297)
T 3fxz_A          169 EQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-----LIATNG---------  232 (297)
T ss_dssp             TTCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHHC---------
T ss_pred             cccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhCC---------
Confidence            4332  145679999999999987 88999999999999999999999997654332211     000000         


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             ......+...+..+.+|+.+||+.||++|||+.|+++
T Consensus       233 -------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          233 -------TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             -------SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -------CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                   0011112244577999999999999999999999976


No 28 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.5e-50  Score=367.38  Aligned_cols=264  Identities=18%  Similarity=0.325  Sum_probs=215.6

Q ss_pred             ccccHHHHHHHhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcc
Q 038681           42 RIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHII  113 (332)
Q Consensus        42 ~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv  113 (332)
                      ..++..+++...++|.+.+.||+|+||.||+|.+       +++.||||++.........+.+.+|+.++.++ +||||+
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv   89 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   89 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence            3466778888899999999999999999999984       45889999998876666678899999999999 799999


Q ss_pred             eE------------EEEEeccCCChHHHHhhhhccc--------------------------------------------
Q 038681          114 KL------------IVFESVQIGTLADRIHHHCEQH--------------------------------------------  137 (332)
Q Consensus       114 ~~------------lv~e~~~~g~L~~~l~~~~~~~--------------------------------------------  137 (332)
                      ++            +||||+++|+|.+++.......                                            
T Consensus        90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            98            8999999999999998653210                                            


Q ss_pred             -----------------ccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCC
Q 038681          138 -----------------FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG  200 (332)
Q Consensus       138 -----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  200 (332)
                                       ...+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                             112899999999999999999999   999999999999999999999999999999876554


Q ss_pred             CceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          201 ETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       201 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                      ..........||+.|+|||++.+ .++.++|||||||++|||++ |..||..........     .....          
T Consensus       247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~----------  311 (359)
T 3vhe_A          247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-----RRLKE----------  311 (359)
T ss_dssp             TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH-----HHHHH----------
T ss_pred             ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH-----HHHHc----------
Confidence            44333356678999999999876 89999999999999999998 999997655432211     11100          


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                           ..  ....+...++++.+++.+||+.||.+|||+.++++.|+++.++
T Consensus       312 -----~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          312 -----GT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             -----TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----CC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence                 00  0011112346799999999999999999999999999999875


No 29 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.6e-49  Score=363.74  Aligned_cols=252  Identities=18%  Similarity=0.299  Sum_probs=206.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe---------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW---------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-------  115 (332)
                      .++|.+.+.||+|+||.||+|.+         .+..||||.+.........+.+.+|+.+++++ +||||+++       
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46788999999999999999986         23569999998876666678899999999999 89999998       


Q ss_pred             ----EEEEeccCCChHHHHhhhhcc-----------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee
Q 038681          116 ----IVFESVQIGTLADRIHHHCEQ-----------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF  180 (332)
Q Consensus       116 ----lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill  180 (332)
                          +||||+++|+|.+++......           ....+++..++.++.||+.||.|||   +++|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence                899999999999999875211           1135899999999999999999999   9999999999999999


Q ss_pred             CCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhh
Q 038681          181 NEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFH  258 (332)
Q Consensus       181 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~  258 (332)
                      +.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            9999999999999987655433222244567889999999877 89999999999999999999 999998755433211


Q ss_pred             hHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          259 YEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                            .+...               .  ....+..++..+.+|+.+||+.||.+|||+.|+++.|+++.+.
T Consensus       317 ------~~~~~---------------~--~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          317 ------LLKEG---------------H--RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             ------HHHTT---------------C--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------HHhcC---------------C--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                  11100               0  0011123447899999999999999999999999999998764


No 30 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.3e-49  Score=355.70  Aligned_cols=249  Identities=22%  Similarity=0.323  Sum_probs=201.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|++.... ....+.+.+|+.++.+++||||+++           +|||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            46788999999999999999999  68999999986543 4447889999999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++....    ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           88 YIKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD  160 (310)
T ss_dssp             CCTTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred             ecCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence            999999999998641    46999999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceee------------ccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhh
Q 038681          200 GETHIE------------LDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       200 ~~~~~~------------~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      ......            .....||+.|+|||++.+ .++.++|||||||++|||++|..||...........       
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-------  233 (310)
T 3s95_A          161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-------  233 (310)
T ss_dssp             -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-------
T ss_pred             ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-------
Confidence            332110            114579999999999988 899999999999999999999999876443222110       


Q ss_pred             hccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          267 SGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                          .......+..    .      +..+++.+.+|+.+||+.||++|||+.++++.|+++...
T Consensus       234 ----~~~~~~~~~~----~------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          234 ----LNVRGFLDRY----C------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             ----BCHHHHHHHT----C------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----hhhhcccccc----C------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                0001111110    0      012335689999999999999999999999999998765


No 31 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=5.6e-49  Score=351.33  Aligned_cols=255  Identities=21%  Similarity=0.338  Sum_probs=199.8

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE----------EEEE
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL----------IVFE  119 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~----------lv~e  119 (332)
                      ...++|.+.+.||+|+||.||+|.+.+ .+|+|.++... .....+.+.+|+.++++++||||+++          +|||
T Consensus        33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e  111 (307)
T 3lb7_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQ  111 (307)
T ss_dssp             CCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             ecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEe
Confidence            445789999999999999999999855 48888887643 34446789999999999999999998          8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++...    ...+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       112 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~  184 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred             cCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence            99999999999754    156999999999999999999999   89999999999999999999999999999986544


Q ss_pred             CCceeeccccccCCCcccccccC---C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFT---T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~---~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ...........||+.|+|||++.   + .++.++|||||||++|||++|..||...........  .... ....+.+. 
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~-~~~~~~~~-  260 (307)
T 3lb7_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF--MVGR-GYASPDLS-  260 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH--HHHH-TCCCCCST-
T ss_pred             ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHH--HHhc-CCCCcchh-
Confidence            32222224567999999999985   3 789999999999999999999999986554332110  0000 00000000 


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                                    .....+++.+.+|+.+||+.||++|||+.+|++.|+.+.+++
T Consensus       261 --------------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          261 --------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             --------------TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             --------------hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence                          011133478999999999999999999999999999987653


No 32 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.3e-50  Score=370.30  Aligned_cols=257  Identities=19%  Similarity=0.268  Sum_probs=209.2

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      .+.+.+....++|.+.+.||+|+||.||+|.+  ++..||||.+.........+.+.+|+.++++++||||+++      
T Consensus       104 ~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  183 (377)
T 3cbl_A          104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ  183 (377)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             ccccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec
Confidence            33345556677899999999999999999999  6899999999876655556778999999999999999998      


Q ss_pred             -----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 -----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 -----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                           +||||+++|+|.+++....    ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|
T Consensus       184 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~D  256 (377)
T 3cbl_A          184 KQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISD  256 (377)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECc
Confidence                 8999999999999998652    35899999999999999999999   99999999999999999999999999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhc
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSG  268 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  268 (332)
                      ||+++...............+++.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..
T Consensus       257 fG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~------~~~~  330 (377)
T 3cbl_A          257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE------FVEK  330 (377)
T ss_dssp             GGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH------HHHT
T ss_pred             CCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc
Confidence            999986544322211122345778999999876 88999999999999999998 999998654432211      1100


Q ss_pred             cccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                     ..  ..+.+..++..+.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus       331 ---------------~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          331 ---------------GG--RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             ---------------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------------CC--CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence                           00  0111123447899999999999999999999999999998764


No 33 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.4e-49  Score=352.84  Aligned_cols=262  Identities=18%  Similarity=0.286  Sum_probs=200.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      .++|++.+.||+|+||.||+|.+      +++.||||++..... ...+.+.+|+.++.+++||||+++           
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            46799999999999999999984      688999999986543 336789999999999999999997           


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred             eEEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence              8999999999999997752    35999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc-
Q 038681          194 SLSIPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN-  270 (332)
Q Consensus       194 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-  270 (332)
                      ++......... ......+|..|+|||++.+ .++.++|||||||++|||++|..||.......       ........ 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-------~~~~~~~~~  233 (295)
T 3ugc_A          161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF-------MRMIGNDKQ  233 (295)
T ss_dssp             CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH-------HHHHCTTCC
T ss_pred             cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH-------HhhhcCccc
Confidence            98765443221 1133457788999999886 89999999999999999999999987543211       11111100 


Q ss_pred             c-chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          271 C-RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       271 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      . .........+....  ..+.+..++.++.+|+.+||+.||++|||+.++++.|+++.+++
T Consensus       234 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          234 GQMIVFHLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             THHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             cchhHHHHHHHHhccC--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            0 00001111111111  11222345588999999999999999999999999999998764


No 34 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2.7e-49  Score=360.69  Aligned_cols=239  Identities=22%  Similarity=0.283  Sum_probs=197.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-----hhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-----HALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      .+.|.+.+.||+|+||.||+|.+  +|..||+|.+......     ...+.+.+|+.++.+++||||+++          
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46799999999999999999999  7899999999765432     135778999999999999999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC----CeEEee
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS----DAKLFD  190 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~D  190 (332)
                       +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++    .+||+|
T Consensus        91 ~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D  162 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID  162 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             EEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence             899999999999999765     57999999999999999999999   99999999999999998877    799999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      ||++.........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+...
T Consensus       163 FG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~------~~i~~~  233 (361)
T 2yab_A          163 FGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ANITAV  233 (361)
T ss_dssp             CSSCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------HHHHTT
T ss_pred             cCCceEcCCCCcc---ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhc
Confidence            9999877654322   45679999999999987 8999999999999999999999999876543321      111111


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...+..              ......+..+.+||.+||..||.+|||+.|+++
T Consensus       234 ~~~~~~--------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          234 SYDFDE--------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CCCCCH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCc--------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            111100              001123477999999999999999999999985


No 35 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=4.4e-49  Score=354.74  Aligned_cols=248  Identities=18%  Similarity=0.266  Sum_probs=201.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      .++|.+.+.||+|+||.||+|.+     .+..||||.+.........+.+.+|+.++++++||||+++           +
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            46688899999999999999998     2445999999887666667889999999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       128 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EeeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            999999999999996541    46999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCce-eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          197 IPDGETH-IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       197 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ....... .......+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..     
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~------~~~~-----  269 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS------SVEE-----  269 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH------HHHT-----
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH------HHHc-----
Confidence            7554321 11133456788999999986 88999999999999999999 999997654432211      1100     


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                               .   ...+.+..++..+.+|+.+||+.||.+|||+.+|++.|+++.++
T Consensus       270 ---------~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          270 ---------G---YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             ---------T---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ---------C---CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence                     0   00111123447899999999999999999999999999999864


No 36 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.5e-49  Score=351.39  Aligned_cols=248  Identities=20%  Similarity=0.322  Sum_probs=197.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|++.+.||+|+||.||+|.+  ++..||+|.+....  .....+.+.+|+.++.+++||||+++           +|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35799999999999999999998  78999999986543  34446789999999999999999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+||+|||+++..
T Consensus        90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            9999999999999876     57999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ....... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||........     ...............
T Consensus       162 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~  235 (294)
T 4eqm_A          162 SETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----AIKHIQDSVPNVTTD  235 (294)
T ss_dssp             --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----HHHHHSSCCCCHHHH
T ss_pred             ccccccc-cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHhhccCCCcchh
Confidence            5443221 144579999999999987 889999999999999999999999987654322     111111111111000


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-TMVDVAKQLRQMY  328 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~l~  328 (332)
                                    .....+..+.+++.+||+.||.+|| ++.++.+.|+++.
T Consensus       236 --------------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          236 --------------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             --------------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             --------------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence                          0113347899999999999999998 8999999998764


No 37 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=8.3e-49  Score=352.36  Aligned_cols=248  Identities=20%  Similarity=0.301  Sum_probs=203.1

Q ss_pred             ccccHHHHHHHhcC----------CCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC
Q 038681           42 RIFSAEELRIATNN----------YDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSH  109 (332)
Q Consensus        42 ~~~~~~el~~~~~~----------y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H  109 (332)
                      ..++.++++.++..          |...+.||+|+||.||+|.+  +|+.||||++....... .+.+.+|+.++++++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR-RELLFNEVVIMRDYQH  101 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS-HHHHHHHHHHHTTCCC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH-HHHHHHHHHHHHhCCC
Confidence            46888888887764          66777999999999999998  79999999997655433 6778999999999999


Q ss_pred             CCcceE-----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 038681          110 KHIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNI  178 (332)
Q Consensus       110 ~nIv~~-----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni  178 (332)
                      |||+++           +||||+++|+|.+++..      ..+++..+..++.||+.||.|||   +.+|+||||||+||
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NI  172 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSI  172 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGE
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHE
Confidence            999987           89999999999999865      35999999999999999999999   89999999999999


Q ss_pred             eeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchh
Q 038681          179 LFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRF  257 (332)
Q Consensus       179 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~  257 (332)
                      |++.++.+||+|||++.........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||.........
T Consensus       173 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~  250 (321)
T 2c30_A          173 LLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  250 (321)
T ss_dssp             EECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999876544322  145679999999999987 8899999999999999999999999765432211


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            ..+...               ...........+..+.+|+.+||+.||++|||+.++++
T Consensus       251 ------~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          251 ------KRLRDS---------------PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ------HHHHHS---------------SCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------HHHhcC---------------CCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  111100               00001111233477999999999999999999999986


No 38 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2e-49  Score=349.62  Aligned_cols=249  Identities=21%  Similarity=0.333  Sum_probs=194.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+     .+..||+|.+.........+.+.+|+.++++++||||+++          
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   91 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW   91 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCE
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccE
Confidence            4456799999999999999999998     2456999999877666667889999999999999999997          


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +++|+||||||+|||++.++.+||+|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             EEEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccc
Confidence            8999999999999997641    36899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      .......... ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+...    
T Consensus       165 ~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~------~i~~~----  233 (281)
T 1mp8_A          165 YMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG------RIENG----  233 (281)
T ss_dssp             ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH------HHHTT----
T ss_pred             ccCccccccc-ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHH------HHHcC----
Confidence            7654432211 34456789999999976 89999999999999999997 999998655433211      11000    


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                .   ..+.+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       234 ----------~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          234 ----------E---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             ----------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------C---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                      0   0011123447899999999999999999999999999998764


No 39 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.2e-49  Score=354.37  Aligned_cols=258  Identities=22%  Similarity=0.345  Sum_probs=210.6

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----
Q 038681           47 EELRIATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----  115 (332)
Q Consensus        47 ~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----  115 (332)
                      .++....++|.+.+.||+|+||.||+|.+       ++..||+|.+.........+.+.+|+.++++++||||+++    
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            34445567899999999999999999987       3478999999877666667889999999999999999998    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcc-------------------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQ-------------------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV  169 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv  169 (332)
                             +||||+++|+|.+++......                   ....+++..++.++.||+.||.|||   +++|+
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iv  172 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV  172 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCc
Confidence                   899999999999999875321                   1134899999999999999999999   99999


Q ss_pred             ecCCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCcc
Q 038681          170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEV  247 (332)
Q Consensus       170 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p  247 (332)
                      ||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|||++ |..|
T Consensus       173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987765544333345567889999999877 78999999999999999999 9999


Q ss_pred             CCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          248 SDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      |..........      .+....                 ....+...+..+.+|+.+||+.||.+|||+.++++.|+++
T Consensus       253 ~~~~~~~~~~~------~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          253 YPGIPPERLFN------LLKTGH-----------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             STTCCGGGHHH------HHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHH------HhhcCC-----------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            97665433211      111000                 0011123447899999999999999999999999999998


Q ss_pred             HHh
Q 038681          328 YRS  330 (332)
Q Consensus       328 ~~~  330 (332)
                      .+.
T Consensus       310 ~~~  312 (314)
T 2ivs_A          310 MVK  312 (314)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            864


No 40 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.6e-49  Score=344.47  Aligned_cols=246  Identities=20%  Similarity=0.318  Sum_probs=203.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ..++|.+.+.||+|+||.||+|.+ ++..||+|++......  .+.+.+|+.++++++||||+++           +|||
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            356789999999999999999999 8889999999876433  4678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++....    ..+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.....
T Consensus        86 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             CCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             eCCCCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            999999999997642    46899999999999999999999   99999999999999999999999999999986654


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      ..... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||..........      .....        
T Consensus       159 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~------~~~~~--------  223 (269)
T 4hcu_A          159 DQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE------DISTG--------  223 (269)
T ss_dssp             HHHHS-TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHHTT--------
T ss_pred             ccccc-ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH------HHhcC--------
Confidence            32211 134557788999999986 89999999999999999999 999997654432211      11000        


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                             .  ....+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       224 -------~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          224 -------F--RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             -------C--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -------c--cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                   0  0001112347799999999999999999999999999999875


No 41 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.7e-48  Score=349.94  Aligned_cols=265  Identities=17%  Similarity=0.234  Sum_probs=206.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.........+.+.+|+.++++++||||+++             +|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            35699999999999999999999  6899999999876555557788999999999999999987             89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee----CCCCCeEEeecCC
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF----NEQSDAKLFDFSL  193 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~  193 (332)
                      |||+++|+|.+++......  ..+++..++.++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             EeCCCCCCHHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            9999999999999875221  24999999999999999999999   9999999999999999    7788899999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccC---------CCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFT---------TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      ++........   ....||+.|+|||++.         ..++.++|||||||++|||++|..||.......... .....
T Consensus       163 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~  238 (319)
T 4euu_A          163 ARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYK  238 (319)
T ss_dssp             CEECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHH
T ss_pred             ceecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHH
Confidence            9877655432   3457999999999874         378899999999999999999999997544322211 11111


Q ss_pred             hhhccccch-h---hhhhhhh--hcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 038681          265 RLSGQNCRF-K---EMVDSII--IEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQ  326 (332)
Q Consensus       265 ~~~~~~~~~-~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~  326 (332)
                      ...+.+... .   .......  ....+.........+..+.+|+.+||+.||++|||++|+++....
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            111111100 0   0000000  001122233446788899999999999999999999999998764


No 42 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=3e-49  Score=361.60  Aligned_cols=251  Identities=18%  Similarity=0.271  Sum_probs=202.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      .++|.+.+.||+|+||.||+|.+       ++..||||++...........+.+|+.++++++||||+++          
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            46789999999999999999995       4568999999877666667789999999999999999997          


Q ss_pred             -EEEEeccCCChHHHHhhhhc--ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC---CeEEe
Q 038681          116 -IVFESVQIGTLADRIHHHCE--QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLF  189 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~  189 (332)
                       +||||+++|+|.+++.....  .....+++..++.++.||+.||.|||   ++||+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence             89999999999999987632  11235899999999999999999999   99999999999999999555   59999


Q ss_pred             ecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhh
Q 038681          190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       190 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      |||+++...............||+.|+|||++.+ .++.++|||||||++|||++ |..||.........      ..+.
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~------~~i~  300 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------EFVT  300 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH------HHHH
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH------HHHH
Confidence            9999975432222112234568999999999876 89999999999999999998 99999865443221      1111


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      ..              .   ....+..++..+.+|+.+||+.||.+|||+.+|++.|+.+.+
T Consensus       301 ~~--------------~---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          301 SG--------------G---RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             TT--------------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cC--------------C---CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            00              0   000112334679999999999999999999999999998875


No 43 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=2e-48  Score=358.03  Aligned_cols=255  Identities=21%  Similarity=0.304  Sum_probs=208.9

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEe---------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE----
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFW---------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL----  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~----  115 (332)
                      +...++|.+.+.||+|+||.||+|.+         .+..||+|++.........+.+.+|+.+++++ +||||+++    
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            44567899999999999999999996         22579999998877776678899999999999 99999998    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcc-----------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQ-----------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTN  177 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N  177 (332)
                             +||||+++|+|.+++......           ....+++..++.++.||+.||.|||   +.+|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence                   899999999999999875321           1135999999999999999999999   8999999999999


Q ss_pred             eeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccc
Q 038681          178 ILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFES  255 (332)
Q Consensus       178 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~  255 (332)
                      ||++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.......
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~  301 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  301 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999987655433222245567889999999887 89999999999999999999 999997655432


Q ss_pred             hhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          256 RFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      ..      ..+....                 ....+..++.++.+|+.+||+.||++|||+.+|++.|+++...
T Consensus       302 ~~------~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          302 LF------KLLKEGH-----------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HH------HHHHTTC-----------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HH------HHHHcCC-----------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            21      1111100                 0001113347899999999999999999999999999998754


No 44 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.1e-49  Score=353.69  Aligned_cols=238  Identities=15%  Similarity=0.212  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|.+....  ...+.+.+|+.+++.++||||+++           +|||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            46799999999999999999999  78999999987553  235678899999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC--CCCeEEeecCCcccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE--QSDAKLFDFSLSLSI  197 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~  197 (332)
                      |+++|+|.+++....    ..+++..+..++.||+.||.|||   ++||+||||||+|||++.  ++.+||+|||+++..
T Consensus        82 ~~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           82 FISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             CCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             eCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            999999999997541    36999999999999999999999   999999999999999987  789999999999887


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+......+   
T Consensus       155 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~i~~~~~~~---  222 (321)
T 1tki_A          155 KPGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII------ENIMNAEYTF---  222 (321)
T ss_dssp             CTTCEE---EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHHTCCCC---
T ss_pred             CCCCcc---ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH------HHHHcCCCCC---
Confidence            655432   45678999999999988 6899999999999999999999999865543221      1111100000   


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ........+.++.+|+.+||..||.+|||+.|+++
T Consensus       223 -----------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          223 -----------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -----------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                       00001133478999999999999999999999987


No 45 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.7e-48  Score=364.32  Aligned_cols=240  Identities=20%  Similarity=0.272  Sum_probs=196.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.+|+|++..... ....+.+.+|+.++++++||||+++           +||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            46699999999999999999998  899999999976543 3346678999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC---CCCCeEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN---EQSDAKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a~  195 (332)
                      ||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++   .++.+||+|||++.
T Consensus        90 E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           90 DLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             CCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            999999999999876     57999999999999999999999   99999999999999998   56789999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+.       
T Consensus       162 ~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~------~~i~-------  226 (444)
T 3soa_A          162 EVEGEQQA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY------QQIK-------  226 (444)
T ss_dssp             CCCTTCCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHH-------
T ss_pred             EecCCCce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH------HHHH-------
Confidence            76654332  135679999999999988 8999999999999999999999999765433221      1111       


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             ......+.+.....++.+.+|+.+||+.||.+|||+.|+++
T Consensus       227 -------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          227 -------AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             -------HTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -------hCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                   11111111111234578999999999999999999999986


No 46 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.2e-48  Score=353.26  Aligned_cols=236  Identities=19%  Similarity=0.280  Sum_probs=195.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|.+....  .....+.+.+|+.++..++||||+++           +|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            46799999999999999999999  78999999997542  12236678999999999999999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||+++..
T Consensus        84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            9999999999999876     57999999999999999999999   999999999999999999999999999999864


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+.         
T Consensus       156 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~~i~---------  218 (337)
T 1o6l_A          156 ISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF------ELIL---------  218 (337)
T ss_dssp             CCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHH---------
T ss_pred             ccCCCc--ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH------HHHH---------
Confidence            333221  145689999999999987 8999999999999999999999999765432211      1111         


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~  322 (332)
                           .....    .+...+.++.+||.+||+.||.+||     +++++++
T Consensus       219 -----~~~~~----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          219 -----MEEIR----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -----HCCCC----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -----cCCCC----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                 11110    1113347899999999999999999     8998875


No 47 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-49  Score=358.10  Aligned_cols=257  Identities=19%  Similarity=0.280  Sum_probs=207.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEeCC-------eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFWQK-------RSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----  115 (332)
                      .+....++|.+.+.||+|+||.||+|.+.+       ..||+|.+.........+.+.+|+.++++++||||+++     
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344567889999999999999999999843       78999999877666667889999999999999999998     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcc-------------------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQ-------------------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY  170 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH  170 (332)
                            +||||+++|+|.+++......                   ....+++..++.++.||+.||.|||   +++|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence                  899999999999999864211                   1146899999999999999999999   999999


Q ss_pred             cCCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccC
Q 038681          171 RDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVS  248 (332)
Q Consensus       171 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~  248 (332)
                      |||||+|||++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|||++ |..||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            99999999999999999999999976644322222244568899999999876 89999999999999999999 99999


Q ss_pred             CCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 038681          249 DHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY  328 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~  328 (332)
                      .........      ..+...              ..   ...+..++..+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus       278 ~~~~~~~~~------~~~~~~--------------~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          278 YGMAHEEVI------YYVRDG--------------NI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             TTSCHHHHH------HHHHTT--------------CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCChHHHH------HHHhCC--------------Cc---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            765443221      111100              00   0011233478999999999999999999999999999887


Q ss_pred             Hh
Q 038681          329 RS  330 (332)
Q Consensus       329 ~~  330 (332)
                      +.
T Consensus       335 ~~  336 (343)
T 1luf_A          335 ER  336 (343)
T ss_dssp             C-
T ss_pred             hh
Confidence            54


No 48 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=5.6e-49  Score=353.78  Aligned_cols=241  Identities=21%  Similarity=0.268  Sum_probs=194.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++.........+.+.+|+.+++.++||||+++           +|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            46799999999999999999998  7899999999766554445678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++...     ..+++..++.++.||+.||.|||   +.||+||||||+|||++.++.+||+|||+++....
T Consensus        86 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            99999999999765     56999999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      ...........||+.|+|||++.+ . ++.++|||||||++|+|++|..||..........    ..+... ..      
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----~~~~~~-~~------  226 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY----SDWKEK-KT------  226 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH----HHHHTT-CT------
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH----HHHhcc-cc------
Confidence            433333345689999999999876 4 4789999999999999999999997654432211    011000 00      


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                ........+..+.+|+.+||+.||.+|||+.|+++
T Consensus       227 ----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          227 ----------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             ----------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----------cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                      00001133477889999999999999999999975


No 49 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-48  Score=352.20  Aligned_cols=238  Identities=22%  Similarity=0.288  Sum_probs=195.9

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-----hhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-----HALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      +.|.+.+.||+|+||.||+|.+  ++..||+|.+......     ...+.+.+|+.++++++||||+++           
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4599999999999999999999  6899999998765332     136778999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC----CeEEeec
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS----DAKLFDF  191 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Df  191 (332)
                      +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++    .+||+||
T Consensus        91 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  162 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF  162 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence            899999999999999765     57999999999999999999999   99999999999999998887    7999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      |+++........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........      ......
T Consensus       163 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~~~~~~  233 (326)
T 2y0a_A          163 GLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------NVSAVN  233 (326)
T ss_dssp             TTCEECCTTSCC---CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------HHHHTC
T ss_pred             CCCeECCCCCcc---ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HHHhcC
Confidence            999877544322   35679999999999987 89999999999999999999999997654432211      110000


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+..              ......+..+.+|+.+||+.||.+|||+.++++
T Consensus       234 ~~~~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          234 YEFED--------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CCCCH--------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcCc--------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000              000123467899999999999999999999986


No 50 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=3.7e-49  Score=355.54  Aligned_cols=247  Identities=18%  Similarity=0.332  Sum_probs=195.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCe----eEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKR----SISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------l  116 (332)
                      .++|++.+.||+|+||.||+|.+  ++.    .||+|.+.........+.+.+|+.++++++||||+++          +
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   93 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence            45699999999999999999998  444    3688888766555557889999999999999999998          8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      |+||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.
T Consensus        94 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             EEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence            999999999999998642    46999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ..............+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..      
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~------~~~~------  234 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------ILEK------  234 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH------HHHT------
T ss_pred             ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH------HHHc------
Confidence            765544333344567889999999887 89999999999999999999 999998665433211      1100      


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                           ..      ..+.+..++..+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus       235 -----~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          235 -----GE------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             -----TC------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             -----CC------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                 00      001112334679999999999999999999999999998864


No 51 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.2e-48  Score=356.90  Aligned_cols=240  Identities=22%  Similarity=0.333  Sum_probs=197.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      ..++|.+.+.||+|+||.||+|.+  ++..||+|++.... .....+.+.+|+.++++++||||+++           +|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            356799999999999999999999  78999999997654 34446789999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC---CeEEeecCCc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLS  194 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~a  194 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++   .+||+|||++
T Consensus       107 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             ECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            9999999999999765     56999999999999999999999   99999999999999998654   5999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      .........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+..     
T Consensus       179 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------~~i~~-----  244 (362)
T 2bdw_A          179 IEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY------AQIKA-----  244 (362)
T ss_dssp             BCCTTCCSC---CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHH-----
T ss_pred             eEecCCccc---ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH------HHHHh-----
Confidence            877654322   45679999999999988 8999999999999999999999999765432211      11110     


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               .....+.+.....+.++.+|+.+||+.||.+|||+.++++
T Consensus       245 ---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          245 ---------GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             ---------TCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ---------CCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                     0000011111234478999999999999999999999876


No 52 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=2.1e-48  Score=345.99  Aligned_cols=253  Identities=19%  Similarity=0.326  Sum_probs=194.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHh--hcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASR--MSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.++++.||||++....    ...+..|.+++..  ++||||+++               
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGG----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEecccc----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            4679999999999999999999999999999986542    4556677777776  799999987               


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF-----SRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                      +||||+++|+|.+++..      ..+++..++.++.||+.||.|||+..     +++|+||||||+|||++.++.+||+|
T Consensus        83 lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  156 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD  156 (301)
T ss_dssp             EEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             EehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEee
Confidence            89999999999999964      36999999999999999999999321     57999999999999999999999999


Q ss_pred             cCCccccCCCCceee--ccccccCCCcccccccCCC-------CChhhhHHHHHHHHHHHHhC----------CccCCCC
Q 038681          191 FSLSLSIPDGETHIE--LDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLTA----------QEVSDHV  251 (332)
Q Consensus       191 fg~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-------~~~~sDiwSlG~~l~elltg----------~~p~~~~  251 (332)
                      ||+++..........  .....||+.|+|||++.+.       ++.++|||||||++|||++|          ..||...
T Consensus       157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence            999976654433211  1344799999999998762       34799999999999999999          7777544


Q ss_pred             CccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      ....... ...........           ..............+..+.+|+.+||+.||++|||+.+|++.|+++
T Consensus       237 ~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          237 VPNDPSF-EDMRKVVCVDQ-----------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCSSCCH-HHHHHHHTTSC-----------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcch-hhhhHHHhccC-----------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            3222111 00000000000           0000000011235678899999999999999999999999999986


No 53 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.5e-48  Score=341.52  Aligned_cols=245  Identities=18%  Similarity=0.283  Sum_probs=202.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ..++|.+.+.||+|+||.||+|.+ ++..||+|.+......  .+.+.+|+.++.+++||||+++           +|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            456799999999999999999999 6778999999865433  4678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++....    ..+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           84 YISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             ccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            999999999997752    35999999999999999999999   99999999999999999999999999999987765


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      ...... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||..........     .......       
T Consensus       157 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~-------  223 (268)
T 3sxs_A          157 DQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-----KVSQGHR-------  223 (268)
T ss_dssp             TCEEEC-CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-----HHHTTCC-------
T ss_pred             hhhhcc-cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH-----HHHcCCC-------
Confidence            543322 34556788999999987 88999999999999999999 999997655432211     0000000       


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                 ...+...++.+.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus       224 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          224 -----------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             -----------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             -----------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence                       00011233679999999999999999999999999988754


No 54 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.9e-48  Score=343.00  Aligned_cols=243  Identities=23%  Similarity=0.377  Sum_probs=197.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhh------HHHHHHHHHHHHhhcCCCcceE---------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHA------LEWCINHIVYASRMSHKHIIKL---------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~------~~~~~~E~~~l~~l~H~nIv~~---------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+........      .+.+.+|+.++++++||||+++         
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR   97 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence            46799999999999999999999  789999999876543211      2678999999999999999998         


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeeCCCCC-----eEE
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNILFNEQSD-----AKL  188 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~-----~kl  188 (332)
                      +||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +++  |+||||||+|||++.++.     +||
T Consensus        98 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl  170 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV  170 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred             EEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence            8999999999999886542    46999999999999999999999   889  999999999999988776     999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR  265 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~  265 (332)
                      +|||+++......     ....||+.|+|||++.+   .++.++|||||||++|+|++|..||...........    ..
T Consensus       171 ~Dfg~~~~~~~~~-----~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~  241 (287)
T 4f0f_A          171 ADFGLSQQSVHSV-----SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----NM  241 (287)
T ss_dssp             CCCTTCBCCSSCE-----ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH----HH
T ss_pred             CCCCccccccccc-----cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH----HH
Confidence            9999997544321     45679999999999843   678999999999999999999999976554332110    00


Q ss_pred             hhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          266 LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      ...              .  ......+..+++.+.+|+.+||+.||.+|||++++++.|++|
T Consensus       242 ~~~--------------~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          242 IRE--------------E--GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHH--------------S--CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             Hhc--------------c--CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            000              0  001111123457899999999999999999999999999763


No 55 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.8e-48  Score=347.03  Aligned_cols=258  Identities=19%  Similarity=0.309  Sum_probs=210.4

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----  115 (332)
                      +....++|.+.+.||+|+||.||+|.+       ++..||+|.+.........+.+.+|+.++.++ +||||+++     
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            344567899999999999999999985       46789999998776666678899999999999 99999998     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcc-------------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQ-------------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT  176 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~  176 (332)
                            +||||+++|+|.+++......             ....+++..++.++.||+.||.|||   +++|+||||||+
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~  174 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR  174 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence                  899999999999999875311             1125899999999999999999999   999999999999


Q ss_pred             CeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCcc
Q 038681          177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFE  254 (332)
Q Consensus       177 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~  254 (332)
                      ||+++.++.+||+|||++................+|+.|+|||++.+ .++.++|||||||++|+|++ |..||......
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            99999999999999999987766544333345567889999999876 89999999999999999999 99999765543


Q ss_pred             chhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          255 SRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      ....     ...           ....      ....+...+..+.+|+.+||+.||.+|||+.++++.|+++.+++
T Consensus       255 ~~~~-----~~~-----------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          255 SKFY-----KMI-----------KEGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHH-----HHH-----------HHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hHHH-----HHh-----------ccCC------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            2211     111           0000      00011233478999999999999999999999999999998764


No 56 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=5.4e-48  Score=344.94  Aligned_cols=247  Identities=22%  Similarity=0.383  Sum_probs=193.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------EEEEeccC
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------IVFESVQI  123 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------lv~e~~~~  123 (332)
                      .++|++.+.||+|+||.||+|.+.++.||+|.+....   ..+.+.+|+.++++++||||+++         +||||+++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~   83 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEG   83 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCC
Confidence            4578899999999999999999999999999986542   35778999999999999999998         89999999


Q ss_pred             CChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC-eEEeecCCccccCCCCc
Q 038681          124 GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD-AKLFDFSLSLSIPDGET  202 (332)
Q Consensus       124 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~~~  202 (332)
                      |+|.+++....  ....+++..++.++.|++.||.|||+...++|+||||||+||+++.++. +||+|||++....... 
T Consensus        84 ~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-  160 (307)
T 2eva_A           84 GSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-  160 (307)
T ss_dssp             CBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-
Confidence            99999997642  1134789999999999999999999211189999999999999998887 7999999997654332 


Q ss_pred             eeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhh
Q 038681          203 HIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSII  281 (332)
Q Consensus       203 ~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (332)
                          ....||+.|+|||++.+ .++.++|||||||++|||++|+.||..........   ........            
T Consensus       161 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~------------  221 (307)
T 2eva_A          161 ----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWAVHNGT------------  221 (307)
T ss_dssp             --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHHHHTTC------------
T ss_pred             ----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHHHhcCC------------
Confidence                34468999999999988 89999999999999999999999997543321100   00000000            


Q ss_pred             hcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          282 IEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                            ........+..+.+|+.+||+.||.+|||+.++++.|+.+.+.
T Consensus       222 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          222 ------RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             ------CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             ------CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence                  0011123346799999999999999999999999999998764


No 57 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1.5e-48  Score=366.24  Aligned_cols=244  Identities=19%  Similarity=0.333  Sum_probs=202.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------EE
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------IV  117 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------lv  117 (332)
                      ....++|.+.+.||+|+||.||+|.+.++.||||.++...   ..+.+.+|+.++++++||||+++            ||
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            3456778999999999999999999999999999998654   25678999999999999999997            89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++.....   ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++..
T Consensus       266 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             EECCTTCBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            999999999999987521   34799999999999999999999   999999999999999999999999999999865


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ....     ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||......+...      .+..       
T Consensus       340 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~------~i~~-------  401 (450)
T 1k9a_A          340 SSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP------RVEK-------  401 (450)
T ss_dssp             C-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH------HHHT-------
T ss_pred             cccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc-------
Confidence            4332     23367889999999987 89999999999999999998 999998665433211      1100       


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                              ..  ..+.+..+++.+.+||.+||+.||.+|||+.++++.|+.+...
T Consensus       402 --------~~--~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          402 --------GY--KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             --------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             --------CC--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence                    00  1111224457899999999999999999999999999998764


No 58 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.5e-49  Score=354.09  Aligned_cols=247  Identities=19%  Similarity=0.358  Sum_probs=198.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCee----EEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRS----ISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------l  116 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..    ||+|.+.........+.+.+|+.++.+++||||+++          +
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL   91 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence            35688999999999999999998  4544    888888665544445667899999999999999998          8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             EEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             EEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            999999999999997642    46899999999999999999999   89999999999999999999999999999988


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ..............+|..|+|||++.+ .++.++|||||||++|+|++ |..||..........      .+....    
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~------~~~~~~----  234 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD------LLEKGE----  234 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH------HHHTTC----
T ss_pred             cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH------HHHcCC----
Confidence            765544333345678889999999986 89999999999999999999 999998754433211      110000    


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                   ....+..++..+.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       235 -------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          235 -------------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             -------------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             -------------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                         000011223568899999999999999999999999998864


No 59 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.4e-49  Score=356.14  Aligned_cols=257  Identities=17%  Similarity=0.308  Sum_probs=203.0

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----  115 (332)
                      ++...++|.+.+.||+|+||.||+|.+       .+..||+|.+.........+.+.+|+.++.++ +||||+++     
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            445668899999999999999999996       35679999998765555567899999999999 89999998     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcc------------------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQ------------------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYR  171 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~  171 (332)
                            +||||+++|+|.+++......                  ....+++..++.++.||+.||.|||   ++||+||
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~  196 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR  196 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence                  899999999999999865211                  0134899999999999999999999   9999999


Q ss_pred             CCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCC
Q 038681          172 DMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSD  249 (332)
Q Consensus       172 Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~  249 (332)
                      ||||+|||++.++.+||+|||++................||+.|+|||++.+ .++.++|||||||++|+|+| |..||.
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  276 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP  276 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence            9999999999999999999999987655443333345678899999999876 89999999999999999998 999998


Q ss_pred             CCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          250 HVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      .........     .....           ..      ....+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus       277 ~~~~~~~~~-----~~~~~-----------~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          277 GIPVDANFY-----KLIQN-----------GF------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             TCCCSHHHH-----HHHHT-----------TC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cCCcHHHHH-----HHHhc-----------CC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            765432211     11110           00      001111334789999999999999999999999999998875


Q ss_pred             h
Q 038681          330 S  330 (332)
Q Consensus       330 ~  330 (332)
                      .
T Consensus       335 ~  335 (344)
T 1rjb_A          335 D  335 (344)
T ss_dssp             -
T ss_pred             H
Confidence            4


No 60 
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.3e-48  Score=351.22  Aligned_cols=265  Identities=19%  Similarity=0.291  Sum_probs=197.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHH--HHhhcCCCcceE--------------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVY--ASRMSHKHIIKL--------------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~~--------------  115 (332)
                      ..++|.+.+.||+|+||.||+|.++++.||||++....    ...+..|..+  +..++||||+++              
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            45789999999999999999999999999999997543    3334445444  445899999987              


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC---------CeeecCCCCCCeeeCCCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR---------PIVYRDMKPTNILFNEQS  184 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~---------~ivH~Dlkp~Nill~~~~  184 (332)
                        +||||+++|+|.+++...      ..++..+..++.||+.||.|||   +.         +|+||||||+|||++.++
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~  157 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDG  157 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred             EEEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCC
Confidence              799999999999999764      4689999999999999999999   88         999999999999999999


Q ss_pred             CeEEeecCCccccCCCCc------eeeccccccCCCcccccccCC--------CCChhhhHHHHHHHHHHHHhCCccCCC
Q 038681          185 DAKLFDFSLSLSIPDGET------HIELDSVVGTTGFIAPENFTT--------LINEQCDVYGFGAFLFELLTAQEVSDH  250 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~--------~~~~~sDiwSlG~~l~elltg~~p~~~  250 (332)
                      .+||+|||+++.......      ........||+.|+|||++.+        .++.++|||||||++|||++|..||..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            999999999987654321      111234579999999999875        355789999999999999999877754


Q ss_pred             CCccchhhhHHHHhhhhccccchhhhhhhhhh----cccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 038681          251 VSFESRFHYEENVKRLSGQNCRFKEMVDSIII----EDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQ  326 (332)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~  326 (332)
                      .........  .........+...+.......    ...+.........++.+.+|+.+||+.||++|||+.|+++.|++
T Consensus       238 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          238 GESVPEYQM--AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             TSCCCCCCC--TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             ccchhHHHH--hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence            332221110  111111111111111110000    11111222234577889999999999999999999999999999


Q ss_pred             HHHhh
Q 038681          327 MYRSC  331 (332)
Q Consensus       327 l~~~~  331 (332)
                      +...+
T Consensus       316 ll~~~  320 (336)
T 3g2f_A          316 LMMIW  320 (336)
T ss_dssp             HHHCC
T ss_pred             HHHHH
Confidence            98764


No 61 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=8.5e-49  Score=345.75  Aligned_cols=249  Identities=16%  Similarity=0.257  Sum_probs=200.9

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      +....++|.+.+.||+|+||.||+|.+ ++..||+|++......  .+.+.+|+.++.+++||||+++           +
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence            344567899999999999999999999 7778999999876433  4678999999999999999997           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +++|+||||||+||+++.++.+||+|||+++.
T Consensus        97 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  169 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY  169 (283)
T ss_dssp             EECCCTTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred             EEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccc
Confidence            999999999999997642    46999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||..........      .+....    
T Consensus       170 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~------~~~~~~----  238 (283)
T 3gen_A          170 VLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE------HIAQGL----  238 (283)
T ss_dssp             BCCHHHHS-TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH------HHHTTC----
T ss_pred             cccccccc-ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH------HHhccc----
Confidence            65432211 134456788999999986 89999999999999999998 999998655432211      110000    


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                   ....+...++.+.+|+.+||+.||.+|||+.++++.|.++.+.
T Consensus       239 -------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          239 -------------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             -------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                         0000112236799999999999999999999999999998753


No 62 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.9e-48  Score=344.80  Aligned_cols=251  Identities=21%  Similarity=0.378  Sum_probs=192.7

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE----------EEEE
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL----------IVFE  119 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~----------lv~e  119 (332)
                      +..++|.+.+.||+|+||.||+|.+.+ .||+|.+.... .....+.+.+|+.++++++||||+++          +|||
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e   99 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   99 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence            346789999999999999999999855 49999997654 34456789999999999999999997          8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++++|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++.....
T Consensus       100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A          100 WCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            999999999996542    46999999999999999999999   99999999999999999999999999999976654


Q ss_pred             CCceeeccccccCCCcccccccC---C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc--cccch
Q 038681          200 GETHIELDSVVGTTGFIAPENFT---T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG--QNCRF  273 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~---~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~  273 (332)
                      ...........||+.|+|||++.   + .++.++|||||||++|+|++|..||.........     ......  ....+
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~  247 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSPDL  247 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH-----HHHHHHTSCCCCT
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH-----HHHhcccccCcch
Confidence            33222224567999999999986   3 7899999999999999999999999865443221     111100  00000


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                     ......++..+.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       248 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          248 ---------------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             ---------------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ---------------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                           00112344789999999999999999999999999998764


No 63 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=4.4e-48  Score=340.92  Aligned_cols=248  Identities=23%  Similarity=0.344  Sum_probs=200.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------l  116 (332)
                      ..++|.+.+.||+|+||.||+|.+     .+..||+|.+.........+.+.+|+.++++++||||+++          +
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI   89 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEE
Confidence            456799999999999999999987     2345999999887666667889999999999999999998          8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....    ..+++..+..++.||+.||.|||   +++|+||||||+||+++.++.+||+|||++..
T Consensus        90 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             EEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             EEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            999999999999997652    45899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||..........      .+..      
T Consensus       163 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~------~~~~------  229 (281)
T 3cc6_A          163 IEDEDYYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG------VLEK------  229 (281)
T ss_dssp             C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH------HHHH------
T ss_pred             cccccccc-cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH------HHhc------
Confidence            65443221 134567889999999976 89999999999999999998 999997654433211      0000      


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                              ..   ..+.+...++.+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus       230 --------~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          230 --------GD---RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             --------TC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------CC---CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence                    00   0001112347799999999999999999999999999998753


No 64 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.5e-48  Score=349.22  Aligned_cols=263  Identities=18%  Similarity=0.331  Sum_probs=214.3

Q ss_pred             cccHHHHHHHhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcce
Q 038681           43 IFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIK  114 (332)
Q Consensus        43 ~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~  114 (332)
                      .+...++....++|.+.+.||+|+||.||+|.+       +++.||||.+.........+.+.+|+.++.++ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            356667777788999999999999999999984       45889999998876666677899999999999 7999998


Q ss_pred             E------------EEEEeccCCChHHHHhhhhccc-----------ccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 038681          115 L------------IVFESVQIGTLADRIHHHCEQH-----------FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYR  171 (332)
Q Consensus       115 ~------------lv~e~~~~g~L~~~l~~~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~  171 (332)
                      +            +||||+++|+|.+++.......           ...+++..++.++.||+.||.|||   +++|+||
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~  172 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR  172 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence            8            8999999999999998653210           122889999999999999999999   8999999


Q ss_pred             CCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCC
Q 038681          172 DMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSD  249 (332)
Q Consensus       172 Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~  249 (332)
                      ||||+||+++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence            9999999999999999999999987655444333355678999999999876 89999999999999999998 999997


Q ss_pred             CCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          250 HVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      ........     ...+..               ..  ....+...+..+.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus       253 ~~~~~~~~-----~~~~~~---------------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          253 GVKIDEEF-----CRRLKE---------------GT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             TCCCSHHH-----HHHHHH---------------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccchhHHH-----HHHhcc---------------Cc--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            65433221     111100               00  000111234679999999999999999999999999999987


Q ss_pred             h
Q 038681          330 S  330 (332)
Q Consensus       330 ~  330 (332)
                      +
T Consensus       311 ~  311 (316)
T 2xir_A          311 A  311 (316)
T ss_dssp             H
T ss_pred             h
Confidence            5


No 65 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=9.1e-49  Score=352.10  Aligned_cols=257  Identities=18%  Similarity=0.295  Sum_probs=191.7

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe--CCe---eEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW--QKR---SISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      ++....++|.+.+.||+|+||.||+|.+  ++.   .||||.+.... .....+.+.+|+.++++++||||+++      
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            3444567899999999999999999998  332   79999987653 23447789999999999999999975      


Q ss_pred             -----------EEEEeccCCChHHHHhhhhcc-cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC
Q 038681          116 -----------IVFESVQIGTLADRIHHHCEQ-HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ  183 (332)
Q Consensus       116 -----------lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~  183 (332)
                                 +||||+++|+|.+++...... ....+++..++.++.||+.||.|||   +.||+||||||+|||++.+
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTT
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCC
Confidence                       799999999999999765321 1225899999999999999999999   8999999999999999999


Q ss_pred             CCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHH
Q 038681          184 SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEE  261 (332)
Q Consensus       184 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~  261 (332)
                      +.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|+|++ |..||..........   
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~---  250 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN---  250 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH---
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH---
Confidence            9999999999987655443322234567889999999887 89999999999999999999 999998655433211   


Q ss_pred             HHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          262 NVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                        ......                  ....+...+..+.+|+.+||+.||.+|||+.++++.|+++.+.
T Consensus       251 --~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          251 --YLIGGN------------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             --HHHTTC------------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --HHhcCC------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence              000000                  0011123447899999999999999999999999999999864


No 66 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.1e-48  Score=355.63  Aligned_cols=238  Identities=19%  Similarity=0.272  Sum_probs=191.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhh-cCCCcceE----------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRM-SHKHIIKL----------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~----------  115 (332)
                      ...++|++.+.||+|+||.||+|++  +++.||+|++....  .....+.+.+|..++..+ +||||+++          
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            3457899999999999999999998  78999999997642  223356788999999998 79999997          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||+++|+|.+++...     ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       100 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a  171 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC  171 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccce
Confidence             899999999999999876     57999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........  ....+||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+       
T Consensus       172 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~------~~i-------  236 (353)
T 3txo_A          172 KEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF------EAI-------  236 (353)
T ss_dssp             BCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH-------
T ss_pred             eecccCCcc--ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH------HHH-------
Confidence            864433221  245689999999999987 8999999999999999999999999876543321      111       


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM------VDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~------~evl~  322 (332)
                             ......    .+...+..+.+|+.+||+.||.+||++      .++++
T Consensus       237 -------~~~~~~----~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          237 -------LNDEVV----YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             -------HHCCCC----CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             -------HcCCCC----CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                   111111    111234678999999999999999998      66664


No 67 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=1.9e-48  Score=346.52  Aligned_cols=259  Identities=20%  Similarity=0.291  Sum_probs=201.6

Q ss_pred             cCCCCCCccccCCCceEEEEEe------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------  115 (332)
                      ..|++.+.||+|+||.||+|.+      +++.||+|++.........+.+.+|+.++.+++||||+++            
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4588999999999999999983      7899999999876655557889999999999999999987            


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +++|+||||||+||+++.++.+||+|||++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccc
Confidence             8999999999999996542    46999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCce-eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc--c
Q 038681          195 LSIPDGETH-IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ--N  270 (332)
Q Consensus       195 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~  270 (332)
                      ......... .......||..|+|||++.+ .++.++|||||||++|+|++|..|+......       ........  .
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~  246 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL-------FLKMIGPTHGQ  246 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-------HHHHHCSCCGG
T ss_pred             ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH-------HhhccCCcccc
Confidence            877655432 12234568889999999877 7899999999999999999999986533211       01111110  0


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      ........ .+....  ..+.+...++.+.+|+.+||+.||.+|||+.++++.|+++++
T Consensus       247 ~~~~~~~~-~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          247 MTVTRLVN-TLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             GHHHHHHH-HHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             cCHHHHHH-HHhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            01111111 111111  111223455789999999999999999999999999999863


No 68 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=3.5e-48  Score=355.23  Aligned_cols=248  Identities=20%  Similarity=0.283  Sum_probs=191.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      .++|.+.+.||+|+||.||+|.+     .+..||||.+.........+.+.+|+.++.+++||||+++           +
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            45799999999999999999987     3667999999877666667889999999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       124 v~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             EEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            999999999999997641    46899999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          197 IPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       197 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ........ ......+|+.|+|||++.+ .++.++|||||||++|||++ |..||.........      ..+..     
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~------~~i~~-----  265 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI------KAVDE-----  265 (373)
T ss_dssp             -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH------HHHHT-----
T ss_pred             cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH------HHHHc-----
Confidence            65433211 1122345788999999986 89999999999999999998 99999765432211      11100     


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                            ..      ..+.+..++..+.+|+.+||+.||.+|||+.+|++.|+++.+.
T Consensus       266 ------~~------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          266 ------GY------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             ------TE------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ------CC------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence                  00      0011113447899999999999999999999999999998753


No 69 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=9.8e-49  Score=353.61  Aligned_cols=234  Identities=23%  Similarity=0.330  Sum_probs=193.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++.....  ......+.+|+.+++.++||||+++           +|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            46799999999999999999998  889999999865321  1224578899999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+ +|+|.+++...     ..+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||++...
T Consensus        88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            9999 68999999876     57999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......   ....||+.|+|||++.+ . .+.++|||||||++|+|++|..||..........      .....      
T Consensus       159 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~------~i~~~------  223 (336)
T 3h4j_B          159 TDGNFL---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK------KVNSC------  223 (336)
T ss_dssp             TTSBTT---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC------CCCSS------
T ss_pred             cCCccc---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH------HHHcC------
Confidence            554322   45679999999999987 4 4789999999999999999999997654322110      00000      


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                  ....+...++.+.+|+.+||+.||.+|||+.|+++
T Consensus       224 ------------~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          224 ------------VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             ------------CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             ------------CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                        01111233477899999999999999999999975


No 70 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=3.9e-48  Score=355.29  Aligned_cols=238  Identities=19%  Similarity=0.298  Sum_probs=195.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....  .....+.+.+|+.++..++|||||++           +|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            46799999999999999999999  78899999987542  22335778999999999999999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.||+||||||+|||++.+|.+||+|||+++..
T Consensus        94 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             ECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            9999999999999875     57999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCceeeccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ......   ....||+.|+|||++.+    .++.++|||||||++|||++|..||..........   .........   
T Consensus       166 ~~~~~~---~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~---~~~~~~~~~---  236 (384)
T 4fr4_A          166 PRETQI---TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE---IVHTFETTV---  236 (384)
T ss_dssp             CTTCCB---CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH---HHHHHHHCC---
T ss_pred             cCCCce---eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH---HHHHHhhcc---
Confidence            554332   46789999999999863    58999999999999999999999997544332211   111111100   


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT-MVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~  322 (332)
                                 .    ..+...+..+.+||.+||+.||.+||+ +++|++
T Consensus       237 -----------~----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 -----------V----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -----------C----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -----------c----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                       0    111233478999999999999999998 666653


No 71 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.2e-48  Score=350.47  Aligned_cols=247  Identities=18%  Similarity=0.337  Sum_probs=195.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCee----EEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRS----ISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------l  116 (332)
                      .++|++.+.||+|+||.||+|.+  ++..    |++|.+.........+.+.+|+.++++++||||+++          +
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence            46799999999999999999998  4544    578887766555557889999999999999999987          8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      |+||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.
T Consensus        94 v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred             EEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence            999999999999998652    46999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ..............+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..      
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~------~~~~------  234 (327)
T 3lzb_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------ILEK------  234 (327)
T ss_dssp             -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH------HHHT------
T ss_pred             ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH------HHHc------
Confidence            655443333244567889999999987 89999999999999999999 999998765433211      1100      


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                               ..  ..+.+...+..+.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       235 ---------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          235 ---------GE--RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             ---------TC--CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             ---------CC--CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                     00  001112334679999999999999999999999999999874


No 72 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=4.5e-48  Score=347.11  Aligned_cols=257  Identities=21%  Similarity=0.296  Sum_probs=204.0

Q ss_pred             CCCCCccccCCCceEEEEEe------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------------E
Q 038681           56 YDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------------I  116 (332)
Q Consensus        56 y~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------------l  116 (332)
                      |.+.+.||+|+||.||++.+      +++.||||++.........+.+.+|+.++++++||||+++             +
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            48999999999999998875      6788999999987766667889999999999999999987             8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++...      .+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++..
T Consensus       113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence            99999999999999764      4999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc--c
Q 038681          197 IPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC--R  272 (332)
Q Consensus       197 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~  272 (332)
                      ........ ......+|+.|+|||++.+ .++.++|||||||++|+|++|..||........       ........  .
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-------~~~~~~~~~~~  256 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-------ELIGIAQGQMT  256 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-------HHHCSCCHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-------hhhcccccchh
Confidence            76544321 1234567888999999987 889999999999999999999999875432110       00000000  0


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      .... ...+...  ...+.+..++..+.+|+.+||+.||.+|||+.++++.|+++.+.+
T Consensus       257 ~~~~-~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          257 VLRL-TELLERG--ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHHH-HHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHhcc--cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            0001 1111111  111122345578999999999999999999999999999998754


No 73 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=5.8e-49  Score=369.51  Aligned_cols=254  Identities=19%  Similarity=0.324  Sum_probs=208.0

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------  115 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------  115 (332)
                      +...++++..++|.+.+.||+|+||.||+|.+ .+..||||.+.....  ..+.+.+|+.++++++|||||++       
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~  255 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVTKE  255 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEeCC
Confidence            34456667778899999999999999999999 688999999986543  36789999999999999999998       


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+++|+|.+++.....   ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG  329 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFG  329 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTT
T ss_pred             ccEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCC
Confidence               89999999999999986421   35899999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++......... .....+|+.|+|||++.. .++.++|||||||++|||++ |..||......+...      .+.   
T Consensus       330 ~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~------~i~---  399 (454)
T 1qcf_A          330 LARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR------ALE---  399 (454)
T ss_dssp             GGGGBCCHHHHT-TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH------HHH---
T ss_pred             CceEcCCCceec-cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH------HHH---
Confidence            998765432111 123456788999999985 89999999999999999999 999998654432211      110   


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                  ...  ..+.+..++..+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus       400 ------------~~~--~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          400 ------------RGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             ------------HTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             ------------cCC--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence                        000  011112445789999999999999999999999999998764


No 74 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=6e-48  Score=346.15  Aligned_cols=263  Identities=18%  Similarity=0.250  Sum_probs=185.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ..++|++.+.||+|+||.||+|.+  +++.||+|.+.........+.+.+|+.++++++||||+++           +||
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            356799999999999999999998  6899999999876554445778999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhc-ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          119 ESVQIGTLADRIHHHCE-QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      ||++ |+|.+++..... .....+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9998 599999976532 12235899999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......  .....||+.|+|||++.+  .++.++|||||||++|||++|..||..........  ...............
T Consensus       159 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          159 GIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK--LIFDIMGTPNESLWP  234 (317)
T ss_dssp             TSCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCSCCTTTCG
T ss_pred             CCCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCCChhHhh
Confidence            543221  134578999999999876  68999999999999999999999998765543321  111111111110000


Q ss_pred             hhhhhhh------cccCC------CCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIII------EDKSC------TCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~------~~~~~------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .......      .....      ........+..+.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            0000000      00000      00000123468999999999999999999999875


No 75 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=4.1e-48  Score=349.07  Aligned_cols=250  Identities=16%  Similarity=0.213  Sum_probs=199.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||.+.....   .+.+.+|+.+++++ +||||+++           +||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            46799999999999999999997  899999999876543   23578999999999 99999987           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC-----eEEeecCC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD-----AKLFDFSL  193 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfg~  193 (332)
                      ||+ +|+|.+++....    ..+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.     +||+|||+
T Consensus        85 e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             EeC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence            999 899999998641    46999999999999999999999   899999999999999998887     99999999


Q ss_pred             ccccCCCCcee-----eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          194 SLSIPDGETHI-----ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       194 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      ++.........     ......||+.|+|||++.+ .++.++|||||||++|||++|..||...................
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~  236 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK  236 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence            98764433211     1135679999999999988 89999999999999999999999998765433221111110000


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      . ... .+.    ..          ... +++.+|+..||+.||.+||++++|.+.|+++.+.
T Consensus       237 ~-~~~-~~~----~~----------~~~-p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          237 R-ATP-IEV----LC----------ENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             H-HSC-HHH----HT----------TTC-HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             c-cCC-HHH----Hh----------ccC-hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            0 000 000    00          012 3899999999999999999999999999988764


No 76 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=3.1e-48  Score=357.12  Aligned_cols=241  Identities=18%  Similarity=0.261  Sum_probs=190.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhh-cCCCcceE-----------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRM-SHKHIIKL-----------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~~-----------  115 (332)
                      ..++|++.+.||+|+||.||+|++  +++.||+|++.....  ....+.+.+|..++.++ +|||||++           
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            356799999999999999999998  788999999976532  22345688999999988 89999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++
T Consensus       130 lV~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~  201 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK  201 (396)
T ss_dssp             EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceee
Confidence            899999999999999876     57999999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........  ....+||+.|+|||++.+ .++.++|||||||++|||++|..||...........           ....
T Consensus       202 ~~~~~~~~--~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-----------~~~~  268 (396)
T 4dc2_A          202 EGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----------NTED  268 (396)
T ss_dssp             CCCCTTCC--BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------------CCHH
T ss_pred             ecccCCCc--cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-----------hhHH
Confidence            64332221  246789999999999988 899999999999999999999999975432211000           0000


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM  317 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~  317 (332)
                      .+.........    ..+...+.++.+||.+||+.||.+||++
T Consensus       269 ~~~~~i~~~~~----~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          269 YLFQVILEKQI----RIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHHCCC----CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHhcccc----CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            01111111111    1112344789999999999999999996


No 77 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=2e-48  Score=352.76  Aligned_cols=239  Identities=22%  Similarity=0.337  Sum_probs=194.8

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhh-cCCCcceE--------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRM-SHKHIIKL--------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~--------  115 (332)
                      .....++|.+.+.||+|+||.||+|++  +++.||+|++....  .....+.+..|..++..+ +||||+++        
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            445678899999999999999999999  78999999997642  122356788999999987 89999997        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+++|+|.+++...     ..+++..+..++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG  163 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFG  163 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeECh
Confidence               899999999999999876     57999999999999999999999   9999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +++........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+.....
T Consensus       164 ~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~~i~~~~~  235 (345)
T 1xjd_A          164 MCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------HSIRMDNP  235 (345)
T ss_dssp             TCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHHCCC
T ss_pred             hhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH------HHHHhCCC
Confidence            99865433221  245689999999999987 8999999999999999999999999865543221      11111111


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMV-DVA  321 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~-evl  321 (332)
                      .+                  +...+.++.+|+.+||+.||++||++. +|+
T Consensus       236 ~~------------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          236 FY------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CC------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CC------------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            11                  112347799999999999999999987 554


No 78 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=8.3e-49  Score=352.09  Aligned_cols=266  Identities=17%  Similarity=0.321  Sum_probs=215.3

Q ss_pred             CCCcccccHHHHHHHhcCCCCCCccccCCCceEEEEEeC-------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCC
Q 038681           38 YNPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQ-------KRSISLMKYNGNRNQHALEWCINHIVYASRMSHK  110 (332)
Q Consensus        38 ~~~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~  110 (332)
                      ......+..++++...++|.+.+.||+|+||.||+|.+.       +..||+|.+...........+.+|+.++++++||
T Consensus         9 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~   88 (322)
T 1p4o_A            9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH   88 (322)
T ss_dssp             SBCCSCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCT
T ss_pred             cccccccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCC
Confidence            344566777888888899999999999999999999873       5789999998776666677899999999999999


Q ss_pred             CcceE-----------EEEEeccCCChHHHHhhhhcc-----cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 038681          111 HIIKL-----------IVFESVQIGTLADRIHHHCEQ-----HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMK  174 (332)
Q Consensus       111 nIv~~-----------lv~e~~~~g~L~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk  174 (332)
                      ||+++           +||||+++|+|.+++......     ....+++..++.++.||+.||.|||   ++||+|||||
T Consensus        89 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dik  165 (322)
T 1p4o_A           89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLA  165 (322)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCS
T ss_pred             CEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCc
Confidence            99998           899999999999999864211     1135799999999999999999999   8999999999


Q ss_pred             CCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCC
Q 038681          175 PTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVS  252 (332)
Q Consensus       175 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~  252 (332)
                      |+||+++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|+|++ |..||....
T Consensus       166 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  245 (322)
T 1p4o_A          166 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS  245 (322)
T ss_dssp             GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred             cceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC
Confidence            9999999999999999999986654433322244567899999999876 89999999999999999999 899997654


Q ss_pred             ccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          253 FESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      .....      ......              .   ....+...+..+.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       246 ~~~~~------~~~~~~--------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          246 NEQVL------RFVMEG--------------G---LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHH------HHHHTT--------------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHH------HHHHcC--------------C---cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            33211      111000              0   000112334779999999999999999999999999987643


No 79 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.7e-48  Score=353.26  Aligned_cols=243  Identities=19%  Similarity=0.252  Sum_probs=193.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC----ChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR----NQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      .+.|++.+.||+|+||.||+|.+  +++.||||++....    .....+.+.+|+.+++.++||||+++           
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35699999999999999999998  78999999986432    11235778999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC---eEEeecC
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFS  192 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg  192 (332)
                      +||||+++|+|.+++...... ...+++..+..++.||+.||.|||   +++|+||||||+|||++.++.   +||+|||
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             EEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            899999999999988765321 135899999999999999999999   999999999999999986655   9999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      ++.........  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......       ....+.....
T Consensus       179 ~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~i~~~~~  249 (351)
T 3c0i_A          179 VAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-------LFEGIIKGKY  249 (351)
T ss_dssp             TCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-------HHHHHHHTCC
T ss_pred             ceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-------HHHHHHcCCC
Confidence            99877654322  135679999999999987 7899999999999999999999999764211       1111100000


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+              ........+..+.+|+.+||+.||++|||+.++++
T Consensus       250 ~~--------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          250 KM--------------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CC--------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC--------------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00              00000123478999999999999999999999986


No 80 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=6.7e-48  Score=345.84  Aligned_cols=233  Identities=20%  Similarity=0.308  Sum_probs=194.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|..  +++.||+|++.....  ....+.+.+|+.+++.++||||+++           +|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            46799999999999999999999  789999999975421  2235678899999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||+++..
T Consensus        85 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             ECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence            9999999999999875     57999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ....     ....||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+          
T Consensus       157 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------~~i----------  215 (318)
T 1fot_A          157 PDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY------EKI----------  215 (318)
T ss_dssp             SSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHH----------
T ss_pred             CCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------HHH----------
Confidence            5432     35679999999999987 8899999999999999999999999765432211      111          


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~  322 (332)
                          ......    .+...+.++.+|+.+||+.||++||     +++++++
T Consensus       216 ----~~~~~~----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          216 ----LNAELR----FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             ----HHCCCC----CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----HhCCCC----CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                111100    1112347799999999999999999     8888874


No 81 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.5e-47  Score=337.64  Aligned_cols=251  Identities=14%  Similarity=0.179  Sum_probs=200.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+.....   .+.+.+|+.++..+ +|+||+++           +||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            46799999999999999999997  899999999875543   24578899999999 78998887           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC-----eEEeecCC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD-----AKLFDFSL  193 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfg~  193 (332)
                      ||+ +|+|.+++....    ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.     +||+|||+
T Consensus        86 e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             Eec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            999 899999998651    35999999999999999999999   999999999999999987776     99999999


Q ss_pred             ccccCCCCce-----eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          194 SLSIPDGETH-----IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       194 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      ++........     .......||+.|+|||++.+ .++.++|||||||++|||++|..||...................
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  237 (298)
T 1csn_A          158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK  237 (298)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence            9876544321     11245679999999999987 88999999999999999999999998754432221110100000


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                       ........               ...+++.+.+|+.+||+.||++|||+++|++.|+++.+.
T Consensus       238 -~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          238 -QSTPLREL---------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             -HHSCHHHH---------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -cCccHHHH---------------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence             00000000               012347899999999999999999999999999999865


No 82 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=5.2e-48  Score=340.03  Aligned_cols=251  Identities=20%  Similarity=0.340  Sum_probs=205.6

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------E
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------I  116 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------l  116 (332)
                      +++...++|.+.+.||+|+||.||+|.+ .+..||+|.+......  .+.+.+|+.++++++||||+++          +
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI   84 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEE
Confidence            3445567899999999999999999999 6778999999765432  5778999999999999999998          8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++.....   ..+++..+..++.|++.||.|||   +++|+||||||+||+++.++.+||+|||++..
T Consensus        85 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            9999999999999976421   25999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ......... ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.........      ..+...     
T Consensus       159 ~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~------~~~~~~-----  226 (279)
T 1qpc_A          159 IEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI------QNLERG-----  226 (279)
T ss_dssp             CSSSCEECC-TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH------HHHHTT-----
T ss_pred             ccCcccccc-cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH------HHHhcc-----
Confidence            765433221 34567889999999976 78999999999999999999 99999765432211      111100     


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                .  ....+...+..+.+|+.+||+.||++|||++++++.|+++..+
T Consensus       227 ----------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          227 ----------Y--RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             ----------C--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------c--CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence                      0  0001123347899999999999999999999999999998865


No 83 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=1.7e-47  Score=345.64  Aligned_cols=254  Identities=19%  Similarity=0.306  Sum_probs=206.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe---------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW---------QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----  115 (332)
                      ...++|.+.+.||+|+||.||+|.+         ++..||+|++.........+.+.+|+.++.++ +||||+++     
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  111 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  111 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence            3457899999999999999999986         34679999998776666678899999999999 89999998     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcc-----------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQ-----------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNI  178 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni  178 (332)
                            +||||+++|+|.+++......           ....+++..++.++.||+.||.|||   +.+|+||||||+||
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV  188 (334)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred             cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceE
Confidence                  899999999999999865311           1124899999999999999999999   99999999999999


Q ss_pred             eeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccch
Q 038681          179 LFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESR  256 (332)
Q Consensus       179 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~  256 (332)
                      +++.++.+||+|||+++...............+|+.|+|||++.+ .++.++|||||||++|+|++ |..||........
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  268 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  268 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence            999999999999999987765543333344567889999999876 78999999999999999999 9999976543321


Q ss_pred             hhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          257 FHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .      ..+...              .   ....+..++..+.+|+.+||+.||.+|||+.++++.|+++.+.
T Consensus       269 ~------~~~~~~--------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          269 F------KLLKEG--------------H---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             H------HHHHHT--------------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H------HHHhcC--------------C---CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1      111000              0   0001123347799999999999999999999999999998753


No 84 
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-47  Score=343.67  Aligned_cols=254  Identities=19%  Similarity=0.332  Sum_probs=193.1

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh--cCCCcceE-----------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM--SHKHIIKL-----------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~~-----------  115 (332)
                      -....++|.+.+.||+|+||.||+|.++++.||||++....    ...+..|.+++..+  +||||+++           
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            33445679999999999999999999999999999986542    34455666666554  89999987           


Q ss_pred             ----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC--------CeeecCCCCCCeeeCCC
Q 038681          116 ----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR--------PIVYRDMKPTNILFNEQ  183 (332)
Q Consensus       116 ----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~--------~ivH~Dlkp~Nill~~~  183 (332)
                          +||||+++|+|.+++...      .+++..++.++.|++.||.|||   ..        +|+||||||+|||++.+
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~  178 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN  178 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             CceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence                899999999999999653      5899999999999999999999   88        99999999999999999


Q ss_pred             CCeEEeecCCccccCCCCcee--eccccccCCCcccccccCC-CCCh------hhhHHHHHHHHHHHHhCCc--------
Q 038681          184 SDAKLFDFSLSLSIPDGETHI--ELDSVVGTTGFIAPENFTT-LINE------QCDVYGFGAFLFELLTAQE--------  246 (332)
Q Consensus       184 ~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~------~sDiwSlG~~l~elltg~~--------  246 (332)
                      +.+||+|||+++.........  ......||+.|+|||++.+ ..+.      ++|||||||++|||++|..        
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~  258 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY  258 (337)
T ss_dssp             SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence            999999999997665433221  1134579999999999976 3333      4999999999999999944        


Q ss_pred             --cCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCC---CCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038681          247 --VSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSC---TCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVA  321 (332)
Q Consensus       247 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl  321 (332)
                        ||........               ................   .......++..+.+|+.+||+.||.+|||+.+|+
T Consensus       259 ~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  323 (337)
T 3mdy_A          259 QLPYHDLVPSDP---------------SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK  323 (337)
T ss_dssp             CCTTTTTSCSSC---------------CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cccHhhhcCCCC---------------chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence              4433222111               0111111010000000   0111236778899999999999999999999999


Q ss_pred             HHHHHHHHh
Q 038681          322 KQLRQMYRS  330 (332)
Q Consensus       322 ~~L~~l~~~  330 (332)
                      +.|+++.++
T Consensus       324 ~~L~~l~~~  332 (337)
T 3mdy_A          324 KTLAKMSES  332 (337)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            999999875


No 85 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=7.4e-48  Score=344.66  Aligned_cols=257  Identities=21%  Similarity=0.303  Sum_probs=196.0

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-------  115 (332)
                      +....++|.+.+.||+|+||.||+|.+     ++..||+|.+.... .....+.+.+|+.++++++||||+++       
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            334567788999999999999999987     23479999987653 34446789999999999999999975       


Q ss_pred             ---------EEEEeccCCChHHHHhhhhc-ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC
Q 038681          116 ---------IVFESVQIGTLADRIHHHCE-QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD  185 (332)
Q Consensus       116 ---------lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~  185 (332)
                               +||||+++|+|.+++..... .....+++..++.++.||+.||.|||   +++|+||||||+||+++.++.
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSC
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCc
Confidence                     79999999999999964321 22256999999999999999999999   999999999999999999999


Q ss_pred             eEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHH
Q 038681          186 AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENV  263 (332)
Q Consensus       186 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~  263 (332)
                      +||+|||+++...............+++.|+|||++.+ .++.++|||||||++|+|++ |..||..........     
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----  260 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD-----  260 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH-----
Confidence            99999999987655433222234567889999999987 89999999999999999999 889997654432211     


Q ss_pred             hhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          264 KRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      ......                  ....+...+..+.+|+.+||+.||.+|||+.++++.|+++.+++
T Consensus       261 ~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          261 YLLHGH------------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HHHTTC------------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHcCC------------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            000000                  00111234478999999999999999999999999999998764


No 86 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=7.9e-48  Score=354.06  Aligned_cols=239  Identities=19%  Similarity=0.209  Sum_probs=195.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....... ...+.+|+.++.+++||||+++           +|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH-HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh-HHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            46799999999999999999999  78899999987654333 5678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC--CCCeEEeecCCcccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE--QSDAKLFDFSLSLSI  197 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~  197 (332)
                      |+++|+|.+++....    ..+++..+..++.||+.||.|||   ++||+||||||+|||++.  ++.+||+|||+++..
T Consensus       129 ~~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          129 FLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             CCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             cCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            999999999997541    36899999999999999999999   999999999999999974  577999999999877


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......   ....||+.|+|||++.+ .++.++|||||||++|||++|..||..........      .+..        
T Consensus       202 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~------~i~~--------  264 (387)
T 1kob_A          202 NPDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ------NVKR--------  264 (387)
T ss_dssp             CTTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------HHHH--------
T ss_pred             CCCcce---eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHH------HHHh--------
Confidence            654432   34579999999999987 89999999999999999999999998754332211      1100        


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            .............+.++.+||.+||+.||.+|||+.++++
T Consensus       265 ------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          265 ------CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             ------CCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ------CCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                  0000011111234478999999999999999999999986


No 87 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=7.1e-48  Score=350.08  Aligned_cols=233  Identities=18%  Similarity=0.253  Sum_probs=195.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++....  .....+.+.+|+.++..++||||+++           +|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            36799999999999999999999  78999999986542  12336778999999999999999987           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..++.++.||+.||.|||   ++||+||||||+|||++.++.+||+|||+++..
T Consensus       120 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceec
Confidence            9999999999999876     56999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ....     ....||+.|+|||++.+ .++.++|||||||++|||++|..||........      ...+......    
T Consensus       192 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------~~~i~~~~~~----  256 (350)
T 1rdq_E          192 KGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI------YEKIVSGKVR----  256 (350)
T ss_dssp             SSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCCC----
T ss_pred             cCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH------HHHHHcCCCC----
Confidence            5432     35679999999999987 889999999999999999999999986543221      1111100000    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT-----MVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~  322 (332)
                                    .+...+..+.+|+.+||+.||.+||+     +++|++
T Consensus       257 --------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          257 --------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             --------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             --------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                          11133478999999999999999998     788764


No 88 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=9.9e-48  Score=341.58  Aligned_cols=237  Identities=21%  Similarity=0.337  Sum_probs=188.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-------------------------hhHHHHHHHHHHHH
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-------------------------HALEWCINHIVYAS  105 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~  105 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++......                         ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46799999999999999999998  7899999998754321                         12356899999999


Q ss_pred             hhcCCCcceE-------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 038681          106 RMSHKHIIKL-------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRD  172 (332)
Q Consensus       106 ~l~H~nIv~~-------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D  172 (332)
                      +++||||+++             +||||+++|+|.+++..      ..+++..+..++.||+.||.|||   +++|+|||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence            9999999987             89999999999887543      46999999999999999999999   89999999


Q ss_pred             CCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-C---CChhhhHHHHHHHHHHHHhCCccC
Q 038681          173 MKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-L---INEQCDVYGFGAFLFELLTAQEVS  248 (332)
Q Consensus       173 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~---~~~~sDiwSlG~~l~elltg~~p~  248 (332)
                      |||+|||++.++.+||+|||+++.........  ....||+.|+|||++.+ .   ++.++|||||||++|+|++|..||
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  240 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF  240 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSSSCEE--CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCHHHEEECCCCCEEEecCCCccccccccccc--cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence            99999999999999999999998765543321  45679999999999976 3   478999999999999999999999


Q ss_pred             CCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          249 DHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ........      ...+.....                ..+.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       241 ~~~~~~~~------~~~~~~~~~----------------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          241 MDERIMCL------HSKIKSQAL----------------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCSSHHHH------HHHHHHCCC----------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCccHHHH------HHHHhcccC----------------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            76543221      111100000                00111133477999999999999999999999875


No 89 
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=3.9e-48  Score=340.75  Aligned_cols=245  Identities=18%  Similarity=0.325  Sum_probs=196.6

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------E
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------I  116 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------l  116 (332)
                      +....++|.+.+.||+|+||.||+|.++++.||+|.+....   ..+.+.+|+.++.+++||||+++            +
T Consensus        16 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l   92 (278)
T 1byg_A           16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI   92 (278)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred             ccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence            33446789999999999999999999999999999997653   25778999999999999999987            8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++.....   ..+++..+..++.|++.||.|||   +++|+||||||+||+++.++.+||+|||++..
T Consensus        93 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A           93 VTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  166 (278)
T ss_dssp             EECCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             EEecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccc
Confidence            9999999999999976521   24899999999999999999999   99999999999999999999999999999976


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      .....     ....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.........      ..+...     
T Consensus       167 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~------~~~~~~-----  230 (278)
T 1byg_A          167 ASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------PRVEKG-----  230 (278)
T ss_dssp             --------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH------HHHTTT-----
T ss_pred             ccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH------HHHhcC-----
Confidence            54432     23467889999999876 89999999999999999998 99999765443221      111000     


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                .  ....+...++.+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       231 ----------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          231 ----------Y--KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             ----------C--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------C--CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence                      0  0011123447899999999999999999999999999998764


No 90 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=3.9e-48  Score=349.42  Aligned_cols=258  Identities=19%  Similarity=0.286  Sum_probs=208.2

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe--CC-----eeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE----
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW--QK-----RSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL----  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~----  115 (332)
                      +++...++|.+.+.||+|+||.||+|.+  .+     ..||+|.+.........+.+.+|+.++.++ +||||+++    
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            4555678899999999999999999998  23     379999998877666678899999999999 89999998    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcc---------cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQ---------HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNIL  179 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil  179 (332)
                             +||||+++|+|.+++......         ....+++..++.++.||+.||.|||   +++|+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence                   899999999999999865321         0135899999999999999999999   899999999999999


Q ss_pred             eCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchh
Q 038681          180 FNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRF  257 (332)
Q Consensus       180 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~  257 (332)
                      ++.++.+||+|||++................+|+.|+|||++.+ .++.++|||||||++|||++ |..||.........
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  276 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF  276 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence            99999999999999986654433323345567889999999876 89999999999999999998 99999765433221


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .     ...           ....      ....+...+..+.+|+.+||+.||.+|||+.+|++.|+++.++
T Consensus       277 ~-----~~~-----------~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          277 Y-----KLV-----------KDGY------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             H-----HHH-----------HHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H-----HHH-----------hcCC------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            1     110           0000      0001112346799999999999999999999999999988754


No 91 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-47  Score=338.85  Aligned_cols=241  Identities=25%  Similarity=0.318  Sum_probs=192.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      ++|.+.+.||+|+||.||+|.+  ++..||+|++.........+.+.+|+.++++++||||+++           +||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            3599999999999999999998  7889999999876655557889999999999999999997           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCcccc
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~  197 (332)
                      +++|+|.+++...... ...+++..++.++.||+.||.|||   +.+|+||||||+||++   +.++.+||+|||++...
T Consensus       102 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          102 CEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             CCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            9999999999764222 256999999999999999999999   9999999999999999   55688999999999776


Q ss_pred             CCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      ......   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........      ........+.   
T Consensus       178 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~------~~~~~~~~~~---  245 (285)
T 3is5_A          178 KSDEHS---TNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ------KATYKEPNYA---  245 (285)
T ss_dssp             ------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHHCCCCCC---
T ss_pred             CCcccC---cCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh------hhccCCcccc---
Confidence            544322   4567899999999998889999999999999999999999998765433211      1100000000   


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                  ......++.+.+|+.+||+.||++|||+.|+++
T Consensus       246 ------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          246 ------------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             ------------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ------------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                        000012367889999999999999999999985


No 92 
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.9e-47  Score=339.63  Aligned_cols=249  Identities=19%  Similarity=0.304  Sum_probs=199.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------  115 (332)
                      ...|.+.+.||+|+||.||+|.+     ....||+|.+.........+.+.+|+.++++++||||+++            
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            34588899999999999999997     2235899999887776667889999999999999999987            


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++....    ..+++..++.++.|++.||.|||   +++|+||||||+||+++.++.+||+|||+++
T Consensus       104 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~  176 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR  176 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred             EEEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence            8999999999999997541    46899999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCCce--eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          196 SIPDGETH--IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       196 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      ........  .......+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||..........     ....... 
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~-  250 (298)
T 3f66_A          177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRR-  250 (298)
T ss_dssp             CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCC-
T ss_pred             cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCC-
Confidence            66543211  11234567889999999976 89999999999999999999 555665443322111     0110000 


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                                       ...+...+..+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       251 -----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          251 -----------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             -----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             -----------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                             0011123467999999999999999999999999999998765


No 93 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2e-47  Score=337.05  Aligned_cols=239  Identities=22%  Similarity=0.337  Sum_probs=197.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|++.... .....+.+.+|+.++++++||||+++           +||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46799999999999999999998  68999999997654 34446778999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC---eEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~a~  195 (332)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.   +||+|||++.
T Consensus        85 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            999999999999876     57999999999999999999999   999999999999999986655   9999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........   ....||+.|+|||++.+ .++.++||||||+++|+|++|..||..........      ...       
T Consensus       157 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~------~~~-------  220 (284)
T 3kk8_A          157 EVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA------QIK-------  220 (284)
T ss_dssp             ECCSSCBC---CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHH-------
T ss_pred             EcccCccc---cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH------HHH-------
Confidence            76654432   34679999999999988 78999999999999999999999997654332211      110       


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             ......+.+.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       221 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          221 -------AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             -------HTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -------hccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                   00000111111233477999999999999999999999986


No 94 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=2.2e-47  Score=348.46  Aligned_cols=240  Identities=20%  Similarity=0.233  Sum_probs=183.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ..++|.+.+.||+|+||.||+|.+  +++.||+|++......  .+.+.+|+.+++.++||||+++           +||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~   95 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM   95 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence            356799999999999999999999  7899999999765432  3568899999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC--eEEeecCCccc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD--AKLFDFSLSLS  196 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~  196 (332)
                      ||+++|+|.+++...     ..+++..++.++.||+.||.|||   ++||+||||||+|||++.++.  +||+|||+++.
T Consensus        96 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           96 EYASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             EeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            999999999999776     57999999999999999999999   999999999999999987765  99999999975


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCCh-hhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINE-QCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      .......   ....||+.|+|||++.+ .++. ++|||||||++|+|++|+.||..........  ......        
T Consensus       168 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~~~~~~--------  234 (361)
T 3uc3_A          168 SVLHSQP---KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR--KTIQRI--------  234 (361)
T ss_dssp             ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH--HHHHHH--------
T ss_pred             ccccCCC---CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH--HHHHHH--------
Confidence            4333221   45579999999999876 5554 5999999999999999999997654322211  011111        


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            .....  ..+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       235 ------~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          235 ------LSVKY--SIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             ------HTTCC--CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ------hcCCC--CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence                  11110  00111123477899999999999999999999986


No 95 
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.5e-48  Score=356.79  Aligned_cols=268  Identities=18%  Similarity=0.231  Sum_probs=208.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.........+.+.+|+.++++++||||+++             +|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            35699999999999999999999  6899999999876555557788999999999999999987             89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee----CCCCCeEEeecCC
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF----NEQSDAKLFDFSL  193 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~  193 (332)
                      |||+++|+|.+++......  ..+++..++.++.||+.||+|||   +.+|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             EecCCCCCHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            9999999999999865221  23999999999999999999999   9999999999999999    7778899999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCC---------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTT---------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      ++........   ....||+.|+|||++.+         .++.++|||||||++|||++|..||......... ......
T Consensus       163 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~  238 (396)
T 4eut_A          163 ARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYK  238 (396)
T ss_dssp             CEECCCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHH
T ss_pred             ceEccCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHH
Confidence            9876554322   35679999999998752         5678999999999999999999999754432211 111222


Q ss_pred             hhhccccchhhhh----hhhh--hcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          265 RLSGQNCRFKEMV----DSII--IEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       265 ~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      ...+.+......+    +...  ....+............+.+++.+||+.||++|||+.++++.+..+++
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            2222111110000    0000  001122233446788899999999999999999999999999998875


No 96 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=5.6e-48  Score=338.28  Aligned_cols=240  Identities=22%  Similarity=0.350  Sum_probs=187.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCC---hhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRN---QHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+.+..||||++.....   ....+.+.+|+.+++.++||||+++           +||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            46799999999999999999999999999999876533   2235778999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC---eeecCCCCCCeeeCC--------CCCeE
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP---IVYRDMKPTNILFNE--------QSDAK  187 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~---ivH~Dlkp~Nill~~--------~~~~k  187 (332)
                      ||+++|+|.+++..      ..+++..++.++.|++.||.|||   +++   |+||||||+||+++.        ++.+|
T Consensus        86 e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           86 EFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             ECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             EcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            99999999999864      36999999999999999999999   777   999999999999986        77899


Q ss_pred             EeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhh
Q 038681          188 LFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       188 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      |+|||++........    ....||+.|+|||++.+ .++.++||||||+++|+|++|..||..........     ...
T Consensus       157 l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----~~~  227 (271)
T 3dtc_A          157 ITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-----GVA  227 (271)
T ss_dssp             ECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-----HHH
T ss_pred             EccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----hhh
Confidence            999999976654432    34578999999999887 79999999999999999999999998654332211     000


Q ss_pred             hccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          267 SGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      ..               .  ...+.+..+++.+.+++.+||+.||.+|||+.++++.|++|
T Consensus       228 ~~---------------~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          228 MN---------------K--LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TS---------------C--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             cC---------------C--CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            00               0  00111123447899999999999999999999999999864


No 97 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.1e-47  Score=337.56  Aligned_cols=238  Identities=22%  Similarity=0.322  Sum_probs=197.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|++....... .+.+.+|+.++++++||||+++           +|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            45699999999999999999999  67789999987654433 6789999999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLS  196 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~~  196 (332)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +++|+||||||+||++   +.++.+||+|||++..
T Consensus        87 ~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           87 LCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             CCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            99999999999876     56999999999999999999999   9999999999999999   7889999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .......   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........     ..... ...+.  
T Consensus       159 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----~~~~~-~~~~~--  227 (277)
T 3f3z_A          159 FKPGKMM---RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML-----KIREG-TFTFP--  227 (277)
T ss_dssp             CCTTSCB---CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHHHC-CCCCC--
T ss_pred             ccCccch---hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH-----HHHhC-CCCCC--
Confidence            6554432   4567999999999998889999999999999999999999998755432211     11111 00000  


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                  .......++.+.+|+.+||+.||.+|||+.++++
T Consensus       228 ------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          228 ------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             ------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                        0000123478999999999999999999999986


No 98 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.2e-47  Score=338.37  Aligned_cols=258  Identities=16%  Similarity=0.214  Sum_probs=193.0

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ++|++.+.||+|+||+||+|.+  +++.||+|++..... ....+.+.+|+.++++++||||+++           +|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5789999999999999999999  789999999976543 3445778999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++ +|.+++....    ..+++..+..++.||+.||+|||   ++||+||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~-~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSE-EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            9986 6666665431    56999999999999999999999   89999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-cccchhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-QNCRFKEM  276 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  276 (332)
                      ....  .....||+.|+|||++.+  .++.++|||||||++|+|++|..||........ ........... ....+...
T Consensus       154 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~  230 (292)
T 3o0g_A          154 PVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSM  230 (292)
T ss_dssp             CCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTG
T ss_pred             cccc--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhh
Confidence            3322  145678999999999876  489999999999999999998888643332211 11111111111 11111111


Q ss_pred             hhhhhhcc------cCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIED------KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ........      ...........+..+.+|+.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            00000000      00000111234578899999999999999999999986


No 99 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-47  Score=337.51  Aligned_cols=248  Identities=17%  Similarity=0.270  Sum_probs=204.1

Q ss_pred             hcCCCCCC-ccccCCCceEEEEEe----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------EE
Q 038681           53 TNNYDEQN-IVLEDPFRKLYKGFW----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------IV  117 (332)
Q Consensus        53 ~~~y~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------lv  117 (332)
                      .++|.+.+ .||+|+||.||+|.+    ++..||+|.+.........+.+.+|+.++.+++||||+++          +|
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv   87 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   87 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence            35566666 899999999999986    5778999999887666667889999999999999999998          89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...    ...+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus        88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            9999999999999653    146999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          198 PDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       198 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ....... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.........      ..+...     
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~------~~i~~~-----  229 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM------AFIEQG-----  229 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH------HHHHTT-----
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH------HHHhcC-----
Confidence            5443321 1133456889999999976 88999999999999999998 99999765443221      111100     


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                               .   ....+...+..+.+++.+||+.||.+|||+.++++.|++++.+
T Consensus       230 ---------~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          230 ---------K---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             ---------C---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------C---cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                     0   0011123447899999999999999999999999999999865


No 100
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=7.9e-48  Score=341.08  Aligned_cols=254  Identities=17%  Similarity=0.290  Sum_probs=201.9

Q ss_pred             HHHHHHHhcCCCCCC-ccccCCCceEEEEEe----CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE----
Q 038681           46 AEELRIATNNYDEQN-IVLEDPFRKLYKGFW----QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL----  115 (332)
Q Consensus        46 ~~el~~~~~~y~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~----  115 (332)
                      ..++....++|.+.+ .||+|+||.||+|.+    .+..||||.+..... ....+.+.+|+.+++.++||||+++    
T Consensus         8 ~~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A            8 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             ---CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344444567788888 999999999999965    468899999986543 3336789999999999999999997    


Q ss_pred             ------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEe
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF  189 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  189 (332)
                            +||||+++|+|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+||+
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~  159 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKIS  159 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEc
Confidence                  899999999999999875     56999999999999999999999   9999999999999999999999999


Q ss_pred             ecCCccccCCCCceee-ccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhh
Q 038681          190 DFSLSLSIPDGETHIE-LDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       190 Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      |||++........... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.........      ..+
T Consensus       160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~~  233 (291)
T 1xbb_A          160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT------AML  233 (291)
T ss_dssp             CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH------HHH
T ss_pred             cCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH------HHH
Confidence            9999987755443221 123346788999999976 78999999999999999999 99999865443211      111


Q ss_pred             hccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          267 SGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      ....                 ....+..++..+.+++.+||+.||.+|||+.++++.|++++.+
T Consensus       234 ~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          234 EKGE-----------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HcCC-----------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            1000                 0011123447899999999999999999999999999999865


No 101
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=3.1e-47  Score=340.65  Aligned_cols=258  Identities=19%  Similarity=0.232  Sum_probs=195.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|++.+.||+|+||+||+|.+ +++.||+|++..... ....+.+.+|+.++++++||||+++           +|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            46799999999999999999999 889999999976543 3335678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++ +|.+++....    ..+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||+++....
T Consensus       100 ~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A          100 FMEK-DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             CCSE-EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             CCCC-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            9985 8888887542    45999999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-cccchhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-QNCRFKEM  276 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  276 (332)
                      ....  .....||+.|+|||++.+  .++.++|||||||++|+|++|..||..........  ........ ....+...
T Consensus       172 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          172 PVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP--KIFSILGTPNPREWPQV  247 (311)
T ss_dssp             CCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH--HHHHHHCCCCTTTSGGG
T ss_pred             Cccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHHCCCChHHhhhh
Confidence            3322  134578999999999875  68999999999999999999999998766544322  11111111 11111111


Q ss_pred             hhhhhhcc--cCCCC-----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIED--KSCTC-----TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~--~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+......  .....     ......++++.+|+.+||+.||++|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            10000000  00000     000123467899999999999999999999986


No 102
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=6.3e-48  Score=340.90  Aligned_cols=250  Identities=19%  Similarity=0.345  Sum_probs=206.7

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ++...++|.+.+.||+|+||.||+|.+  ++..||+|.+.....  ..+.+.+|+.++++++||||+++           
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            334567899999999999999999999  589999999976543  35788999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++....   ...+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++.
T Consensus        86 ~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~  159 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR  159 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred             EEEEcCCCCcHHHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccce
Confidence            8999999999999997642   145899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      .......... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||..........      ....     
T Consensus       160 ~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~------~~~~-----  227 (288)
T 3kfa_A          160 LMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEK-----  227 (288)
T ss_dssp             TSCSSSSEEE-TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH------HHHT-----
T ss_pred             eccCCccccc-cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHhc-----
Confidence            7765443322 45567889999999986 89999999999999999999 999997655433211      1100     


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                            ..      ....+...++.+.+|+.+||+.||.+|||+.++++.|+++.++
T Consensus       228 ------~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          228 ------DY------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             ------TC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------cC------CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence                  00      0011123347899999999999999999999999999998764


No 103
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.7e-47  Score=345.72  Aligned_cols=240  Identities=18%  Similarity=0.268  Sum_probs=191.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhh-cCCCcceE-----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRM-SHKHIIKL-----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------l  116 (332)
                      .++|.+.+.||+|+||.||+|++  +++.||+|++....  .....+.+.+|..++.++ +||||+++           +
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            45799999999999999999999  78999999997653  334467788999999998 89999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.
T Consensus        88 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence            99999999999999876     57999999999999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......  .....||+.|+|||++.+ .++.++|||||||++|||++|..||...........           .....
T Consensus       160 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----------~~~~~  226 (345)
T 3a8x_A          160 GLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----------NTEDY  226 (345)
T ss_dssp             SCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------------CHHH
T ss_pred             ccCCCCc--ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc-----------ccHHH
Confidence            4332221  245689999999999988 889999999999999999999999975322111000           00000


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM  317 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~  317 (332)
                      +..........    .+...+..+.+|+.+||+.||.+||++
T Consensus       227 ~~~~i~~~~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          227 LFQVILEKQIR----IPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHCCCC----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHcCCCC----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            11111111111    112344789999999999999999996


No 104
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=9.3e-48  Score=351.38  Aligned_cols=258  Identities=12%  Similarity=0.138  Sum_probs=197.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-C------CeeEEEEEEcCCCChhh----------HHHHHHHHHHHHhhcCCCcce
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-Q------KRSISLMKYNGNRNQHA----------LEWCINHIVYASRMSHKHIIK  114 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-~------~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~H~nIv~  114 (332)
                      ..++|.+.+.||+|+||.||+|.+ .      ++.||||.+........          ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456799999999999999999988 2      47899999876642110          112345566677778999997


Q ss_pred             E---------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 038681          115 L---------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNIL  179 (332)
Q Consensus       115 ~---------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil  179 (332)
                      +               |||||+ +|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nil  184 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLL  184 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEE
Confidence            6               899999 999999997641    46999999999999999999999   899999999999999


Q ss_pred             eC--CCCCeEEeecCCccccCCCCcee-----eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCC
Q 038681          180 FN--EQSDAKLFDFSLSLSIPDGETHI-----ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHV  251 (332)
Q Consensus       180 l~--~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~  251 (332)
                      ++  .++.+||+|||+++.........     ......||+.|+|||++.+ .++.++|||||||++|||++|..||...
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            98  88999999999997664332111     1133459999999999988 8999999999999999999999999864


Q ss_pred             CccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .........    ........+...++..+..         ...+.++.+|+..||+.||.+||++.+|++.|+.+.+.
T Consensus       265 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          265 LKDPKYVRD----SKIRYRENIASLMDKCFPA---------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             TTCHHHHHH----HHHHHHHCHHHHHHHHSCT---------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHH----HHHHhhhhHHHHHHHhccc---------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            332221100    0000111223333322210         12247899999999999999999999999999998865


No 105
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=9.7e-48  Score=336.32  Aligned_cols=242  Identities=18%  Similarity=0.235  Sum_probs=199.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-------------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-------------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-------------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+++..||+|++.... .....+.+.+|+.++++++||||+++             +||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            4679999999999999999999999999999998764 34446789999999999999999998             899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||+++|+|.+++....   ...+++..++.++.||+.||.|||   +++  |+||||||+||+++.++.++|+|||++..
T Consensus        89 e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             ECCTTCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             cccCCCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            9999999999998641   125899999999999999999999   888  99999999999999999999999988755


Q ss_pred             cCCCCceeeccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ...       ....||+.|+|||++.+    .++.++|||||||++|||++|..||..........     .....    
T Consensus       163 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-----~~~~~----  226 (271)
T 3kmu_A          163 FQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM-----KVALE----  226 (271)
T ss_dssp             TSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH-----HHHHS----
T ss_pred             ecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH-----HHHhc----
Confidence            332       23468999999999875    34458999999999999999999998654432211     11000    


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                 ..  ....+...+..+.+++.+||+.||++|||++++++.|+++.+
T Consensus       227 -----------~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          227 -----------GL--RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             -----------CC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             -----------CC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                       00  001112344789999999999999999999999999998864


No 106
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=2e-47  Score=359.56  Aligned_cols=235  Identities=24%  Similarity=0.331  Sum_probs=196.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.....  ....+.+.+|+.+++.++||||+++           +|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            36799999999999999999999  799999999975421  2235678999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||++...
T Consensus        95 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           95 MEYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             EECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            9999999999999765     57999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......   ....||+.|+|||++.+ . .+.++|||||||++|+|++|..||........      ...+...      
T Consensus       167 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~------~~~i~~~------  231 (476)
T 2y94_A          167 SDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL------FKKICDG------  231 (476)
T ss_dssp             CTTCCB---CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH------HHHHHTT------
T ss_pred             cccccc---cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH------HHHHhcC------
Confidence            654322   45679999999999987 3 47899999999999999999999986543221      1111110      


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                              ...    .+...++.+.+|+.+||+.||.+|||+.++++
T Consensus       232 --------~~~----~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          232 --------IFY----TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             --------CCC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --------CcC----CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                    000    01123367899999999999999999999986


No 107
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=5.7e-48  Score=345.31  Aligned_cols=247  Identities=21%  Similarity=0.319  Sum_probs=190.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++....  .......+.+|+.++.+++||||+++             
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46799999999999999999998  88999999998653  33446778999999999999999986             


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence              899999999999999876     57999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCce-eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          194 SLSIPDGETH-IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       194 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      ++........ .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.........     .........
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-----~~~~~~~~~  237 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA-----YQHVREDPI  237 (311)
T ss_dssp             C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-----HHHHHCCCC
T ss_pred             cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhcCCCC
Confidence            9876543221 11234578999999999987 8999999999999999999999999866543221     111111100


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHHHH
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVD-VAKQLRQM  327 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-vl~~L~~l  327 (332)
                      ....               .....+.++.+|+.+||+.||.+||++.+ +...|.++
T Consensus       238 ~~~~---------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          238 PPSA---------------RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CHHH---------------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             Cccc---------------ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            0000               00123477999999999999999997655 44555544


No 108
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6.3e-48  Score=337.10  Aligned_cols=246  Identities=20%  Similarity=0.309  Sum_probs=202.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ..++|.+.+.||+|+||.||+|.+ ++..||+|.+......  .+.+.+|+.++++++||||+++           +|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            456799999999999999999999 8889999999876433  4678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++....    ..+++..+..++.|++.||.|||   +++|+|+||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             CCTTCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CCCCCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            999999999997642    45899999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      .... ......+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.........      ..+...        
T Consensus       157 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~i~~~--------  221 (267)
T 3t9t_A          157 DQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTG--------  221 (267)
T ss_dssp             HHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHTT--------
T ss_pred             cccc-ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH------HHHhcC--------
Confidence            3211 1134457789999999986 88999999999999999999 89999765432211      111100        


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                             .  ....+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       222 -------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          222 -------F--RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             -------C--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -------C--cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                   0  0000112346789999999999999999999999999999875


No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=8e-48  Score=349.84  Aligned_cols=239  Identities=24%  Similarity=0.295  Sum_probs=179.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||||++.....   .+.+.+|+.++.+++||||+++           +|
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh---HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            3456799999999999999999999  678899999986542   4567899999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEEeecCCc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFDFSLS  194 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~a  194 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||++
T Consensus       127 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a  198 (349)
T 2w4o_A          127 LELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS  198 (349)
T ss_dssp             ECCCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred             EEeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence            9999999999999765     56999999999999999999999   899999999999999975   889999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........   ....||+.|+|||++.+ .++.++|||||||++|||++|..||........     ....+..     
T Consensus       199 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~i~~-----  265 (349)
T 2w4o_A          199 KIVEHQVLM---KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-----MFRRILN-----  265 (349)
T ss_dssp             -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-----HHHHHHT-----
T ss_pred             cccCccccc---ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-----HHHHHHh-----
Confidence            876543321   34678999999999988 899999999999999999999999976543221     1111111     


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               .......+.....+..+.+|+.+||+.||++|||+.++++
T Consensus       266 ---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          266 ---------CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             ---------TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---------CCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     0000011111234478999999999999999999999986


No 110
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.7e-47  Score=334.89  Aligned_cols=233  Identities=26%  Similarity=0.361  Sum_probs=172.9

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|++....  .....+.+.+|+.+++.++||||+++           +||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            5799999999999999999998  78999999997653  23335678999999999999999997           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+ +++|.+++...     ..+++..+..++.|++.||.|||   +.||+||||||+||+++.++.+||+|||++....
T Consensus        93 e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  163 (275)
T 2eue_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred             hhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence            999 67898888765     56999999999999999999999   9999999999999999999999999999997665


Q ss_pred             CCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .....   ....||+.|+|||++.+ . .+.++|||||||++|+|++|+.||.........      .........    
T Consensus       164 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~~~~----  230 (275)
T 2eue_A          164 DGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF------KNISNGVYT----  230 (275)
T ss_dssp             --------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHHTCCC----
T ss_pred             Ccccc---cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhCCCC----
Confidence            54322   34578999999999987 3 478999999999999999999999765432211      111100000    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .+...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       231 --------------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          231 --------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             --------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --------------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence                          11123467899999999999999999999976


No 111
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-48  Score=352.30  Aligned_cols=246  Identities=19%  Similarity=0.311  Sum_probs=189.6

Q ss_pred             CCCCCccccCCCceEEEEEe--C---CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------EEE
Q 038681           56 YDEQNIVLEDPFRKLYKGFW--Q---KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------IVF  118 (332)
Q Consensus        56 y~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------lv~  118 (332)
                      |.+.+.||+|+||.||+|.+  .   +..||+|.+.........+.+.+|+.++++++||||+++            +||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            56678899999999999997  2   246899998876666667889999999999999999987            899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++...
T Consensus       171 e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             ECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             ECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            9999999999997542    45889999999999999999999   9999999999999999999999999999998664


Q ss_pred             CCCce--eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          199 DGETH--IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       199 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      .....  .......+|+.|+|||++.+ .++.++|||||||++|||++ |.+||..........     ....+.     
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~-----~~~~~~-----  313 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGR-----  313 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH-----HHHTTC-----
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH-----HHHcCC-----
Confidence            43211  11133467889999999876 89999999999999999999 677776554332211     000000     


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                                   ....+..++..+.+++.+||+.||++|||+.++++.|+++..++
T Consensus       314 -------------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          314 -------------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             -------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             -------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence                         00011233477999999999999999999999999999998764


No 112
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.6e-47  Score=336.32  Aligned_cols=247  Identities=20%  Similarity=0.297  Sum_probs=198.8

Q ss_pred             CCCCCCccccCCCceEEEEEe--CC---eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------EE
Q 038681           55 NYDEQNIVLEDPFRKLYKGFW--QK---RSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------IV  117 (332)
Q Consensus        55 ~y~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------lv  117 (332)
                      .|...+.||+|+||.||+|.+  ++   ..||+|.+.........+.+.+|+.++++++||||+++            +|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            356678999999999999997  22   36999999887766667889999999999999999987            89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+.+|+|.+++....    ..+++..+..++.|++.||.|||   +.||+||||||+||+++.++.+||+|||+++..
T Consensus       102 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             ECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             EecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            99999999999997631    46899999999999999999999   899999999999999999999999999999765


Q ss_pred             CCCCce--eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccC-CCCCccchhhhHHHHhhhhccccch
Q 038681          198 PDGETH--IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVS-DHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       198 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ......  .......+|+.|+|||.+.+ .++.++|||||||++|+|++|..|+ ........      .......    
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~------~~~~~~~----  244 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL------THFLAQG----  244 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH------HHHHHTT----
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH------HHHhhcC----
Confidence            443211  11134567899999999988 8999999999999999999965554 43322211      1111000    


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                                 .  ..+.+...+..+.+|+.+||+.||.+|||+.++++.|+++.+++
T Consensus       245 -----------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          245 -----------R--RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             -----------C--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----------C--CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence                       0  00111233467999999999999999999999999999998765


No 113
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.7e-47  Score=343.80  Aligned_cols=238  Identities=21%  Similarity=0.283  Sum_probs=196.0

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChh-----hHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQH-----ALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ++|.+.+.||+|+||.||+|.+  ++..||+|.+.......     ..+.+.+|+.++.+++||||+++           
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4599999999999999999999  78999999987654321     36779999999999999999987           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC----CeEEeec
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS----DAKLFDF  191 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Df  191 (332)
                      +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+||+++.++    .+||+||
T Consensus        92 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df  163 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence            899999999999999765     56899999999999999999999   89999999999999999888    7999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      |++.........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+....
T Consensus       164 g~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~i~~~~  234 (321)
T 2a2a_A          164 GLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ANITSVS  234 (321)
T ss_dssp             TTCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------HHHHTTC
T ss_pred             ccceecCccccc---cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH------HHHHhcc
Confidence            999877654332   34579999999999987 8899999999999999999999999765443221      1111110


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+...              .....+..+.+|+.+||+.||++|||+.++++
T Consensus       235 ~~~~~~--------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          235 YDFDEE--------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CCCCHH--------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             cccChh--------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            010000              00123367899999999999999999999986


No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.2e-48  Score=361.66  Aligned_cols=247  Identities=17%  Similarity=0.262  Sum_probs=198.3

Q ss_pred             HHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           46 AEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        46 ~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      ..++....++|.+.+.||+|+||.||+|.+  +++.||+|++.....  ....+.+.+|+.++..++|||||++      
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            345556678899999999999999999999  788999999865311  1113447899999999999999997      


Q ss_pred             -----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 -----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 -----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                           |||||+++|+|.+++...      .+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~D  211 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLAD  211 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEec
Confidence                 899999999999999653      5899999999999999999999   99999999999999999999999999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC-C----CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhh
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-L----INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR  265 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~----~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~  265 (332)
                      ||+++......... ....+||+.|+|||++.+ .    ++.++|||||||++|||++|..||..........     ..
T Consensus       212 FG~a~~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~-----~i  285 (410)
T 3v8s_A          212 FGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS-----KI  285 (410)
T ss_dssp             CTTCEECCTTSEEE-CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-----HH
T ss_pred             cceeEeeccCCccc-ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH-----HH
Confidence            99998766544322 246789999999999875 3    7899999999999999999999998665433211     00


Q ss_pred             hhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 038681          266 LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPED--RPTMVDVAK  322 (332)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~  322 (332)
                      .           .....    ...+.....+.++.+||.+||+.+|.+  ||+++||++
T Consensus       286 ~-----------~~~~~----~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          286 M-----------NHKNS----LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             H-----------THHHH----CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             H-----------hcccc----ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            0           00000    001111133478999999999999988  999999875


No 115
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=4.5e-48  Score=363.20  Aligned_cols=252  Identities=21%  Similarity=0.307  Sum_probs=200.2

Q ss_pred             HHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------
Q 038681           46 AEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------  115 (332)
Q Consensus        46 ~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------  115 (332)
                      ...+++..++|.+.+.||+|+||.||+|.+ .+..||||.+......  .+.+.+|+.++++++||||+++         
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcCCce
Confidence            445566677899999999999999999999 5678999999865432  4679999999999999999998         


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       |||||+++|+|.+++.....   ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a  327 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA  327 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred             EEEehhhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccc
Confidence             89999999999999975421   35899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      +......... .....+|+.|+|||++.+ .++.++|||||||++|||++ |..||......+...      .+..    
T Consensus       328 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~------~i~~----  396 (452)
T 1fmk_A          328 RLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD------QVER----  396 (452)
T ss_dssp             C---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH------HHHT----
T ss_pred             eecCCCceec-ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc----
Confidence            8765433221 134457889999999876 89999999999999999999 999998654332211      1100    


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                 ..  ..+.+..++..+.+|+.+||+.||++|||+++|++.|+.+..
T Consensus       397 -----------~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          397 -----------GY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             -----------TC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             -----------CC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence                       00  011112445789999999999999999999999999998764


No 116
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=4.8e-47  Score=356.92  Aligned_cols=254  Identities=18%  Similarity=0.261  Sum_probs=190.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.+++.++|||||++              
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46799999999999999999998  79999999997653 34446788999999999999999975              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         |||||+++ +|.+.+..       .+++..+..++.||+.||+|||   +.||+||||||+|||++.++.+||+|||
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG  209 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  209 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEE
Confidence               89999976 57776643       4899999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +++........   ....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+......  .....+.....
T Consensus       210 ~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~--~i~~~lg~p~~  284 (464)
T 3ttj_A          210 LARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN--KVIEQLGTPCP  284 (464)
T ss_dssp             CC-----CCCC-------CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCSCCH
T ss_pred             eeeecCCCccc---CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCCCH
Confidence            99876544322   45689999999999988 89999999999999999999999998765443221  11111111111


Q ss_pred             chhhh----hhhhhhcccC----------------CCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 RFKEM----VDSIIIEDKS----------------CTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~~~~~----~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+...    ..........                .........+.++.+|+.+||+.||++|||++|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            10000    0000000000                000111233678999999999999999999999986


No 117
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=7e-48  Score=346.92  Aligned_cols=237  Identities=22%  Similarity=0.301  Sum_probs=169.8

Q ss_pred             CCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCCcceE-----------EEEEeccCC
Q 038681           59 QNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKHIIKL-----------IVFESVQIG  124 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~-----------lv~e~~~~g  124 (332)
                      .+.||+|+||.||+|.+  +++.||||++...    ....+.+|+.++..+. ||||+++           +||||+++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            47899999999999999  6899999999654    2466789999999997 9999998           899999999


Q ss_pred             ChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC---CeEEeecCCccccCCCC
Q 038681          125 TLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKLFDFSLSLSIPDGE  201 (332)
Q Consensus       125 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~  201 (332)
                      +|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++   .+||+|||+++......
T Consensus        92 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  163 (325)
T 3kn6_A           92 ELFERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN  163 (325)
T ss_dssp             BHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred             cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence            999999875     57999999999999999999999   99999999999999997765   79999999998665443


Q ss_pred             ceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhh
Q 038681          202 THIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSI  280 (332)
Q Consensus       202 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (332)
                      ..  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........             ...+.....
T Consensus       164 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------------~~~~~~~~i  228 (325)
T 3kn6_A          164 QP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT-------------SAVEIMKKI  228 (325)
T ss_dssp             ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC-------------CHHHHHHHH
T ss_pred             Cc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc-------------cHHHHHHHH
Confidence            22  145678999999999987 89999999999999999999999997654321100             001111111


Q ss_pred             hhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          281 IIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...............++++.+|+.+||+.||.+|||++++++
T Consensus       229 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          229 KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             TTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            111111111111234578999999999999999999998863


No 118
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2.5e-47  Score=349.49  Aligned_cols=233  Identities=20%  Similarity=0.212  Sum_probs=186.5

Q ss_pred             CCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEeccCCC
Q 038681           59 QNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFESVQIGT  125 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~~~~g~  125 (332)
                      .+.||+|+||.||+|.+  ++..||+|++...... ..+.+.+|+.++.+++||||+++           |||||+++|+
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK-DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            56799999999999998  7899999999876433 36789999999999999999998           8999999999


Q ss_pred             hHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee--CCCCCeEEeecCCccccCCCCce
Q 038681          126 LADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF--NEQSDAKLFDFSLSLSIPDGETH  203 (332)
Q Consensus       126 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~  203 (332)
                      |.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||+  +.++.+||+|||+++........
T Consensus       173 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~  245 (373)
T 2x4f_A          173 LFDRIIDES----YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL  245 (373)
T ss_dssp             EHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred             HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence            999987542    45899999999999999999999   9999999999999999  56788999999999877654432


Q ss_pred             eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhh
Q 038681          204 IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIII  282 (332)
Q Consensus       204 ~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (332)
                         ....||+.|+|||++.+ .++.++|||||||++|||++|..||..........     .....              
T Consensus       246 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~-----~i~~~--------------  303 (373)
T 2x4f_A          246 ---KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN-----NILAC--------------  303 (373)
T ss_dssp             ---CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-----HHHHT--------------
T ss_pred             ---ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhc--------------
Confidence               34579999999999987 89999999999999999999999998765433211     11110              


Q ss_pred             cccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          283 EDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                       ............++++.+|+.+||+.||.+|||+.|+++
T Consensus       304 -~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          304 -RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             -CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             000000111133478999999999999999999999987


No 119
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=6.6e-48  Score=365.85  Aligned_cols=250  Identities=19%  Similarity=0.356  Sum_probs=204.7

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      +++....+|.+.+.||+|+||.||+|.+  .+..||||.+......  .+.+.+|+.++++++|||||++          
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence            3445566788899999999999999999  5899999999765432  5789999999999999999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       |||||+++|+|.+++.....   ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  365 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS  365 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred             EEEEEccCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccc
Confidence             89999999999999976421   45899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      +......... .....+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..    
T Consensus       366 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~------~~~~----  434 (495)
T 1opk_A          366 RLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEK----  434 (495)
T ss_dssp             ECCTTCCEEC-CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH------HHHT----
T ss_pred             eeccCCceee-cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc----
Confidence            8765443222 134456789999999876 89999999999999999999 999998765432211      1110    


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                 ..  ....+..++..+.+||.+||+.||.+|||+.+|++.|+.+.+
T Consensus       435 -----------~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          435 -----------DY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             -----------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             -----------CC--CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence                       00  111112345789999999999999999999999999987653


No 120
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.7e-47  Score=361.14  Aligned_cols=238  Identities=23%  Similarity=0.335  Sum_probs=195.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ++|.+.+.||+|+||+||+|.+  +++.||||++.... .......+.+|+.++++++||||+++           +|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            5599999999999999999999  78999999986432 12236778999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC---CCCCeEEeecCCccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN---EQSDAKLFDFSLSLS  196 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a~~  196 (332)
                      |+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++   .++.+||+|||+++.
T Consensus       102 ~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          102 LYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            99999999999876     57999999999999999999999   99999999999999995   456799999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .......   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........      .+.         
T Consensus       174 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~i~---------  235 (486)
T 3mwu_A          174 FQQNTKM---KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK------RVE---------  235 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHH---------
T ss_pred             CCCCCcc---CCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHH---------
Confidence            6554332   4567999999999999899999999999999999999999998765433211      111         


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                           ........+.....++.+.+|+.+||+.||.+|||+.++++
T Consensus       236 -----~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          236 -----TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             -----HTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----hCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                 11111111111234578999999999999999999999987


No 121
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=2.8e-47  Score=343.03  Aligned_cols=240  Identities=20%  Similarity=0.334  Sum_probs=191.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcce----------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK----------------  114 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~----------------  114 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.........+.+.+|+.++++++||||++                
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            45699999999999999999999  789999999987666656788999999999999999996                


Q ss_pred             ----------------------------------------------------EEEEEeccCCChHHHHhhhhcccccCCC
Q 038681          115 ----------------------------------------------------LIVFESVQIGTLADRIHHHCEQHFEALS  142 (332)
Q Consensus       115 ----------------------------------------------------~lv~e~~~~g~L~~~l~~~~~~~~~~l~  142 (332)
                                                                          ++||||+++|+|.+++.....  ....+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~  162 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDRE  162 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSC
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchh
Confidence                                                                378999999999999987532  23467


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCce----------eeccccccC
Q 038681          143 LTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH----------IELDSVVGT  212 (332)
Q Consensus       143 ~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt  212 (332)
                      +..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++........          .......||
T Consensus       163 ~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             hHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            7789999999999999999   999999999999999999999999999999877654211          111345799


Q ss_pred             CCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCC
Q 038681          213 TGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTG  291 (332)
Q Consensus       213 ~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (332)
                      +.|+|||++.+ .++.++|||||||++|||++|..|+.....        ........  .+               ...
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--------~~~~~~~~--~~---------------~~~  294 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--------IITDVRNL--KF---------------PLL  294 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--------HHHHHHTT--CC---------------CHH
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--------HHHHhhcc--CC---------------Ccc
Confidence            99999999987 899999999999999999998766431100        11100000  00               011


Q ss_pred             hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          292 KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       292 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ....++.+.+|+.+||+.||.+|||+.|+++
T Consensus       295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             cccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            1244567899999999999999999999986


No 122
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2e-47  Score=347.35  Aligned_cols=238  Identities=17%  Similarity=0.234  Sum_probs=193.8

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhh-cCCCcceE----------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRM-SHKHIIKL----------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~----------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||+|++....  .....+.+.+|..++..+ +||||+++          
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            3457899999999999999999999  57889999997642  122356788999999988 79999987          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||+++|+|.+++...     ..+++..++.++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||++
T Consensus        97 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a  168 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC  168 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence             899999999999999876     57999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||........      ...+.      
T Consensus       169 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~------~~~i~------  234 (353)
T 2i0e_A          169 KENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------FQSIM------  234 (353)
T ss_dssp             BCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHH------
T ss_pred             cccccCCcc--cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH------HHHHH------
Confidence            864332221  245689999999999987 899999999999999999999999986543322      11111      


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPT-----MVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~  322 (332)
                              .....    .+...+.++.+|+.+||+.||.+||+     +.+|++
T Consensus       235 --------~~~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          235 --------EHNVA----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             --------HCCCC----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             --------hCCCC----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                    11110    11133478999999999999999995     466654


No 123
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.6e-47  Score=361.84  Aligned_cols=239  Identities=22%  Similarity=0.294  Sum_probs=194.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh------------hhHHHHHHHHHHHHhhcCCCcceE---
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ------------HALEWCINHIVYASRMSHKHIIKL---  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~H~nIv~~---  115 (332)
                      .++|.+.+.||+|+||+||+|.+  ++..||+|++......            ...+.+.+|+.++++++||||+++   
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            56799999999999999999999  7889999998765321            235678999999999999999998   


Q ss_pred             --------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC---
Q 038681          116 --------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---  184 (332)
Q Consensus       116 --------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---  184 (332)
                              +|||||++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++   
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCS
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCc
Confidence                    899999999999999876     57999999999999999999999   99999999999999998776   


Q ss_pred             CeEEeecCCccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          185 DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      .+||+|||++.........   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........      
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------  257 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKL---RDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK------  257 (504)
T ss_dssp             SEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------
T ss_pred             cEEEEECCCCEEcCCCCcc---ccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------
Confidence            6999999999877654332   4567999999999998899999999999999999999999998765433211      


Q ss_pred             hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          265 RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+......+              ..+.....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       258 ~i~~~~~~~--------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          258 KVEKGKYYF--------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHCCCCC--------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHcCCCCC--------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            111100000              00001123478999999999999999999999986


No 124
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=5.4e-47  Score=335.94  Aligned_cols=252  Identities=17%  Similarity=0.192  Sum_probs=196.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------EE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------IV  117 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------lv  117 (332)
                      ..++|.+.+.||+|+||.||+|.+  +++.||+|.+......   ..+.+|+.++..++|++++..            +|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            346799999999999999999997  8899999987655332   347889999999998887653            89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLS  194 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a  194 (332)
                      |||+ +|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||+   +.++.+||+|||++
T Consensus        84 ~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEcc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            9999 899999997542    46999999999999999999999   9999999999999999   78899999999999


Q ss_pred             cccCCCCce-----eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc
Q 038681          195 LSIPDGETH-----IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG  268 (332)
Q Consensus       195 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~  268 (332)
                      +........     .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||................    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----  231 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS----  231 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH----
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh----
Confidence            876544321     11235679999999999988 89999999999999999999999998755433221110000    


Q ss_pred             cccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                               ........   .......++.+.+|+.+||+.||++|||+++|++.|+++.++
T Consensus       232 ---------~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          232 ---------EKKMSTPI---EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             ---------HHHHHSCH---HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---------cccccchh---hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence                     00000000   000012247899999999999999999999999999999865


No 125
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.8e-47  Score=338.46  Aligned_cols=257  Identities=18%  Similarity=0.231  Sum_probs=192.9

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|++..... ....+.+.+|+.++.+++||||+++           +|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            6799999999999999999999  689999999876544 3335678899999999999999987           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +.||+||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           83 YCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             CCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            99999999988765     56999999999999999999999   99999999999999999999999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      .....  ....||+.|+|||++.+  .++.++|||||||++|+|++|..||...........  .........+......
T Consensus       155 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  230 (311)
T 4agu_A          155 PSDYY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL--IRKTLGDLIPRHQQVF  230 (311)
T ss_dssp             -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCSCCHHHHHHH
T ss_pred             ccccc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhccccccccccc
Confidence            33221  34578999999999865  689999999999999999999999987665433221  1111111111111111


Q ss_pred             hhhh-hcccCCCCC--------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 DSII-IEDKSCTCT--------GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 ~~~~-~~~~~~~~~--------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .... ......+.+        .....+..+.+|+.+||+.||.+|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0000 000000000        00134567899999999999999999999985


No 126
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.1e-46  Score=347.19  Aligned_cols=259  Identities=22%  Similarity=0.286  Sum_probs=186.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhc-CCCcceE------------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMS-HKHIIKL------------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~------------  115 (332)
                      ..++|.+.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.++..+. ||||+++            
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457899999999999999999998  78999999986542 3444677899999999997 9999987            


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||++ |+|.+++...      .+++..+..++.||+.||+|||   +.||+||||||+|||++.++.+||+|||+|
T Consensus        87 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  156 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLS  156 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence             8999997 5999998753      6899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCc-------------------eeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCc
Q 038681          195 LSIPDGET-------------------HIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSF  253 (332)
Q Consensus       195 ~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~  253 (332)
                      +.......                   ........||+.|+|||++.+  .++.++|||||||++|||++|+.||.+...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            86543110                   111234679999999999875  789999999999999999999999987665


Q ss_pred             cchhhhHHHHhhhhcccc---------chhhhhhhhhhcc---c-CCCCC------------ChHHHHHHHHHHHHHccc
Q 038681          254 ESRFHYEENVKRLSGQNC---------RFKEMVDSIIIED---K-SCTCT------------GKEQQLQAFKQLTLQCMD  308 (332)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~-~~~~~------------~~~~~~~~~~~li~~cl~  308 (332)
                      .....  .....+.....         .....+.......   . .....            .....++++.+|+.+||+
T Consensus       237 ~~~~~--~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~  314 (388)
T 3oz6_A          237 MNQLE--RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ  314 (388)
T ss_dssp             HHHHH--HHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred             HHHHH--HHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence            43322  11111111000         0000000000000   0 00000            001234679999999999


Q ss_pred             CCCCCCCCHHHHHH
Q 038681          309 FSPEDRPTMVDVAK  322 (332)
Q Consensus       309 ~dP~~RPs~~evl~  322 (332)
                      .||++|||++|+++
T Consensus       315 ~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          315 FNPNKRISANDALK  328 (388)
T ss_dssp             SSGGGSCCHHHHTT
T ss_pred             cCcccCCCHHHHhC
Confidence            99999999999975


No 127
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1e-47  Score=345.96  Aligned_cols=262  Identities=20%  Similarity=0.267  Sum_probs=203.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      .++|++.+.||+|+||.||+|.+      ++..||||++..... ...+.+.+|+.++++++||||+++           
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence            45799999999999999999984      688999999987643 336779999999999999999987           


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  173 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL  173 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred             EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccc
Confidence              8999999999999998642    35999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          194 SLSIPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       194 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +.......... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||..........     ........
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~  248 (327)
T 3lxl_A          174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM-----MGCERDVP  248 (327)
T ss_dssp             CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-----CC----CC
T ss_pred             ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh-----cccccccc
Confidence            98776544322 2234568888999999887 78999999999999999999999987543221100     00000111


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .......... ...  ..+.+..+++.+.+|+.+||+.||.+|||+.++++.|+.++.+
T Consensus       249 ~~~~~~~~~~-~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          249 ALSRLLELLE-EGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHHHHHHHH-TTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             cHHHHHHHhh-ccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            1111111111 111  1122234557899999999999999999999999999988753


No 128
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-46  Score=339.93  Aligned_cols=248  Identities=21%  Similarity=0.307  Sum_probs=194.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--C----CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--Q----KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +    +..||+|.+...........+.+|+.++.+++||||+++           
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            45677789999999999999988  2    235999999877666667789999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+||+|||+++
T Consensus       123 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             EEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence            8999999999999997641    46899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          196 SIPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       196 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ......... ......+|+.|+|||++.+ .++.++|||||||++|||++ |..||.........      ..+...   
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~------~~~~~~---  266 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM------KAINDG---  266 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHTT---
T ss_pred             hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH------HHHHCC---
Confidence            765432211 1123346788999999986 89999999999999999999 99999765432211      111000   


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                  .  ..+.+..++..+.+|+.+||+.||.+|||+.++++.|+++.+.
T Consensus       267 ------------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          267 ------------F--RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             ------------C--CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ------------C--cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                        0  0011123447799999999999999999999999999998754


No 129
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.5e-47  Score=334.80  Aligned_cols=235  Identities=19%  Similarity=0.368  Sum_probs=191.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      ..++|.+.+.||+|+||.||+|.+  ++..||+|.+.....  ......+.+|+.++++++||||+++           +
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            356799999999999999999999  677899999865432  2225678899999999999999997           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.||+||||||+||+++.++.++|+|||++..
T Consensus        87 v~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~  158 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH  158 (279)
T ss_dssp             EECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred             EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEecccccc
Confidence            99999999999999876     56999999999999999999999   99999999999999999999999999999865


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......    ....||+.|+|||++.+ .++.++||||||+++|+|++|..||..........      ........   
T Consensus       159 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~~---  225 (279)
T 3fdn_A          159 APSSRR----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK------RISRVEFT---  225 (279)
T ss_dssp             C------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHHTCCC---
T ss_pred             CCcccc----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH------HHHhCCCC---
Confidence            544332    34578999999999987 78999999999999999999999998654432211      11100000   


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                     .+...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       226 ---------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          226 ---------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             ---------------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                           11123367899999999999999999999987


No 130
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=5.7e-47  Score=341.26  Aligned_cols=236  Identities=18%  Similarity=0.239  Sum_probs=184.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCC---hhhHHHHHHHHHHHHhhcCCCcceE---------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRN---QHALEWCINHIVYASRMSHKHIIKL---------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~---------  115 (332)
                      .++|++.+.||+|+||.||+|..     +++.||+|++.....   ......+.+|+.++++++||||+++         
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46799999999999999999987     678999999986532   2235568899999999999999997         


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence              899999999999999876     57999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ++........  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........      ..+.     
T Consensus       168 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~------~~i~-----  234 (327)
T 3a62_A          168 CKESIHDGTV--THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI------DKIL-----  234 (327)
T ss_dssp             C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHH-----
T ss_pred             ccccccCCcc--ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH------HHHH-----
Confidence            9765433221  145679999999999987 8899999999999999999999999865443221      1110     


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAK  322 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~  322 (332)
                               .....    .+...+..+.+|+.+||+.||.+||     ++.++++
T Consensus       235 ---------~~~~~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          235 ---------KCKLN----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             ---------HTCCC----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             ---------hCCCC----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                     00000    1112347799999999999999999     6777765


No 131
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.9e-46  Score=331.98  Aligned_cols=235  Identities=19%  Similarity=0.322  Sum_probs=193.2

Q ss_pred             CCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE---------------E
Q 038681           55 NYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL---------------I  116 (332)
Q Consensus        55 ~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~---------------l  116 (332)
                      .|.+.+.||+|+||.||+|.+  ++..||+|.+.... .....+.+.+|+.++++++||||+++               +
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            377788999999999999999  78889999987653 34446789999999999999999986               8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeeC-CCCCeEEeecCC
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNILFN-EQSDAKLFDFSL  193 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~Dfg~  193 (332)
                      ||||+++|+|.+++...     ..+++..++.++.||+.||.|||   +.+  |+||||||+|||++ .++.+||+|||+
T Consensus       107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence            99999999999999875     57999999999999999999999   888  99999999999997 789999999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........    ....||+.|+|||++.+.++.++|||||||++|+|++|..||........     ..........  
T Consensus       179 ~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~--  247 (290)
T 1t4h_A          179 ATLKRASFA----KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGVK--  247 (290)
T ss_dssp             GGGCCTTSB----EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTCC--
T ss_pred             ccccccccc----ccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-----HHHHHhccCC--
Confidence            976554432    34578999999999988999999999999999999999999976443222     1111111000  


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    +.......++.+.+|+.+||+.||.+|||+.++++
T Consensus       248 --------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          248 --------------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             --------------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --------------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                          00011122367999999999999999999999986


No 132
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.1e-47  Score=346.05  Aligned_cols=238  Identities=21%  Similarity=0.323  Sum_probs=190.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+......     ..+|+.++.++ +||||+++           +||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            45699999999999999999999  7899999999765432     35788899888 79999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC-C---CeEEeecCCc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ-S---DAKLFDFSLS  194 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~---~~kl~Dfg~a  194 (332)
                      ||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||+..+ +   .+||+|||++
T Consensus        96 E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             CCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            999999999999765     56999999999999999999999   9999999999999998543 3   4999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||..........   ....+.      
T Consensus       168 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~~~~i~------  236 (342)
T 2qr7_A          168 KQLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE---ILARIG------  236 (342)
T ss_dssp             EECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHH---HHHHHH------
T ss_pred             ccCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHH---HHHHHc------
Confidence            876543322  145678999999999987 78999999999999999999999997643222111   111111      


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                              ..............+..+.+|+.+||+.||++|||+.++++
T Consensus       237 --------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          237 --------SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             --------HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --------cCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                    11111111111234578999999999999999999999876


No 133
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=4.3e-47  Score=333.39  Aligned_cols=241  Identities=21%  Similarity=0.269  Sum_probs=197.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|.+.........+.+.+|+.+++.++||||+++           +|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            46799999999999999999998  6899999999766555557889999999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+|+||||+||+++.++.+||+|||++.....
T Consensus        86 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             ecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            99999999999765     56999999999999999999999   99999999999999999999999999999976644


Q ss_pred             CCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMV  277 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (332)
                      ...........||+.|+|||++.+ . ++.++|||||||++|+|++|..||.........    ...+... ...     
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~-~~~-----  227 (276)
T 2yex_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE----YSDWKEK-KTY-----  227 (276)
T ss_dssp             TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH----HHHHHTT-CTT-----
T ss_pred             CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH----HHHhhhc-ccc-----
Confidence            332222245678999999999987 4 478999999999999999999999765443211    0011100 000     


Q ss_pred             hhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 DSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 .......+..+.+|+.+||+.||.+|||+.++++
T Consensus       228 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          228 -----------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             -----------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                       0001133467899999999999999999999975


No 134
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=4.2e-47  Score=360.56  Aligned_cols=238  Identities=21%  Similarity=0.308  Sum_probs=191.6

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      +.|.+.+.||+|+||.||+|.+  ++..||+|++..... ......+.+|+.+++.++||||+++           +|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4599999999999999999999  788999999876532 2235678999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC---CCeEEeecCCccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ---SDAKLFDFSLSLS  196 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~~  196 (332)
                      ||++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+||||||+|||++..   +.+||+|||++..
T Consensus       117 ~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          117 CYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            99999999999876     57999999999999999999999   9999999999999999764   4599999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .......   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........      .+..        
T Consensus       189 ~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~i~~--------  251 (494)
T 3lij_A          189 FENQKKM---KERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR------KVEK--------  251 (494)
T ss_dssp             CBTTBCB---CCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHH--------
T ss_pred             CCCCccc---cccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHh--------
Confidence            6554322   4567999999999998899999999999999999999999998765433211      1110        


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            .......+.....++.+.+|+.+||+.||.+|||+.++++
T Consensus       252 ------~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          252 ------GKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             ------TCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ------CCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence                  0110111111234478999999999999999999999986


No 135
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=3.5e-48  Score=361.21  Aligned_cols=251  Identities=17%  Similarity=0.206  Sum_probs=199.7

Q ss_pred             cHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----
Q 038681           45 SAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----  115 (332)
Q Consensus        45 ~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----  115 (332)
                      ...++....++|++.+.||+|+||.||+|.+  +++.||+|++.....  ......+.+|+.++..++||||+++     
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            3455566678999999999999999999999  689999999875321  1112347899999999999999997     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEe
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF  189 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  189 (332)
                            |||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEc
Confidence                  8999999999999997631    46999999999999999999999   9999999999999999999999999


Q ss_pred             ecCCccccCCCCceeeccccccCCCcccccccC-----C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHH
Q 038681          190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-----T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENV  263 (332)
Q Consensus       190 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~  263 (332)
                      |||+|+.......... ....||+.|+|||++.     . .++.++|||||||++|||++|..||......+...     
T Consensus       218 DFGla~~~~~~~~~~~-~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~-----  291 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-----  291 (437)
T ss_dssp             CCTTCEECCTTSCEEC-CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-----
T ss_pred             chhhhhhcccCCCccc-ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH-----
Confidence            9999987655443322 4568999999999986     3 68999999999999999999999998765433211     


Q ss_pred             hhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 038681          264 KRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPED--RPTMVDVAK  322 (332)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~  322 (332)
                      ..+           ........  + ......++++.+||.+||..+|++  ||+++|+++
T Consensus       292 ~i~-----------~~~~~~~~--p-~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          292 KIM-----------NHKERFQF--P-TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHH-----------THHHHCCC--C-SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             hhh-----------hccccccC--C-cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            000           00000000  0 000123478999999999998888  999999875


No 136
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1.2e-47  Score=359.94  Aligned_cols=237  Identities=18%  Similarity=0.267  Sum_probs=186.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCC--CChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGN--RNQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      ..++|++.+.||+|+||.||+|.+  +++.||||++...  ........+.+|+.++..++||||+++           |
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346799999999999999999998  7899999998754  223335678899999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFS-RPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      ||||+++|+|.+++...     ..+++..+..++.||+.||+|||   + +||+||||||+|||++.++.+||+|||+++
T Consensus       226 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~  297 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK  297 (446)
T ss_dssp             EECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred             EEeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCce
Confidence            99999999999999876     57999999999999999999999   7 899999999999999999999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+.       
T Consensus       298 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------~~i~-------  362 (446)
T 4ejn_A          298 EGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------ELIL-------  362 (446)
T ss_dssp             TTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHH-------
T ss_pred             eccCCCcc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH------HHHH-------
Confidence            64433222  245689999999999987 8999999999999999999999999765443221      1111       


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~  322 (332)
                             .....    .+...++.+.+||.+||+.||.+||     |+.|+++
T Consensus       363 -------~~~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          363 -------MEEIR----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             -------HCCCC----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -------hCCCC----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                   11110    1112347799999999999999999     9999875


No 137
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.1e-47  Score=337.88  Aligned_cols=257  Identities=18%  Similarity=0.250  Sum_probs=192.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      ++|.+.+.||+|+||.||+|.+ +++.||+|++..... ....+.+.+|+.++++++||||+++           +||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5789999999999999999999 789999999976543 2234678899999999999999998           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCC
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG  200 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  200 (332)
                      +++ +|.+++....    ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             CSE-EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             cCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            985 9999987542    46899999999999999999999   999999999999999999999999999999776543


Q ss_pred             CceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-cccchhhhh
Q 038681          201 ETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-QNCRFKEMV  277 (332)
Q Consensus       201 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  277 (332)
                      ...  .....||+.|+|||++.+  .++.++|||||||++|||++|..||..........  ........ ....+....
T Consensus       154 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  229 (288)
T 1ob3_A          154 VRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--RIFRILGTPNSKNWPNVT  229 (288)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGG
T ss_pred             ccc--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHHCCCChhhchhhh
Confidence            221  134578999999999875  68999999999999999999999998765433221  11111111 111111100


Q ss_pred             -----hhhhhcccCCC-CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 -----DSIIIEDKSCT-CTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 -----~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                           ++......+.+ .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                 00000000000 0001134578899999999999999999999975


No 138
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.3e-47  Score=340.08  Aligned_cols=247  Identities=21%  Similarity=0.255  Sum_probs=192.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+.....  ....+.+.+|+.++.+++||||+++           +|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            57899999999999999999998  789999999976532  3335779999999999999999987           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++++|.+++...     ..+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus       113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            9999999999999876     56999999999999999999999   999999999999999999999999999999766


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ....... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.......      ...........    
T Consensus       185 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~----  253 (309)
T 2h34_A          185 TDEKLTQ-LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV------MGAHINQAIPR----  253 (309)
T ss_dssp             -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH------HHHHHHSCCCC----
T ss_pred             ccccccc-ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH------HHHHhccCCCC----
Confidence            5433221 135578999999999987 88999999999999999999999997654321      11111111000    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-TMVDVAKQLRQMYR  329 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~l~~  329 (332)
                                 ........+..+.+++.+||+.||++|| |++++++.|+++..
T Consensus       254 -----------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          254 -----------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             -----------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             -----------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence                       0011123346799999999999999999 99999999987653


No 139
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.4e-46  Score=333.51  Aligned_cols=251  Identities=17%  Similarity=0.194  Sum_probs=199.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE------------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL------------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~------------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+......   +.+.+|+.++..++|++++..            +||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            46799999999999999999997  8999999998765432   457899999999998886643            899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~  195 (332)
                      ||+ +|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||+   +.++.+||+|||++.
T Consensus        85 e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             Eec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            999 899999997542    46999999999999999999999   9999999999999999   488899999999998


Q ss_pred             ccCCCCcee-----eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          196 SIPDGETHI-----ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       196 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      .........     ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||................     
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-----  231 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS-----  231 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH-----
T ss_pred             cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc-----
Confidence            765543211     1135679999999999988 89999999999999999999999998754332211100000     


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                              ........   .......++.+.+|+.+||+.||.+|||+.+|++.|+++.+.
T Consensus       232 --------~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          232 --------EKKMSTPI---EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             --------HHHHHSCH---HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             --------ccccCCch---HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence                    00000000   000012347799999999999999999999999999998865


No 140
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=4.5e-47  Score=339.90  Aligned_cols=255  Identities=19%  Similarity=0.270  Sum_probs=187.9

Q ss_pred             cCCCCC-CccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           54 NNYDEQ-NIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      +.|.+. +.||+|+||.||+|.+  +++.||||++...... ..+.+.+|+.++.++ +||||+++           +||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH-IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC-CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch-hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            567774 7899999999999998  7899999999766433 367889999999995 79999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC---eEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg~a~  195 (332)
                      ||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.   +||+|||++.
T Consensus        91 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           91 EKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            999999999999876     57999999999999999999999   899999999999999988776   9999999997


Q ss_pred             ccCCCCc-----eeeccccccCCCcccccccCC------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          196 SIPDGET-----HIELDSVVGTTGFIAPENFTT------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       196 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      .......     ........||+.|+|||++.+      .++.++|||||||++|||++|..||............    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~----  238 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR----  238 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC------
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc----
Confidence            6543221     111134569999999999862      5788999999999999999999999865433210000    


Q ss_pred             hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          265 RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                       ......................+.......+..+.+|+.+||+.||.+|||+.|+++
T Consensus       239 -~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          239 -GEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             ---CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -cccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence             000000000011111111111010000123478999999999999999999999987


No 141
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3.5e-47  Score=342.48  Aligned_cols=248  Identities=20%  Similarity=0.275  Sum_probs=195.8

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeE--EEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSI--SLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IV  117 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~v--avK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv  117 (332)
                      ++|.+.+.||+|+||.||+|.+  ++..+  |+|.+.........+.+.+|+.++.++ +||||+++           +|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            6799999999999999999998  66654  999988765555567799999999999 89999998           89


Q ss_pred             EEeccCCChHHHHhhhhc-----------ccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCe
Q 038681          118 FESVQIGTLADRIHHHCE-----------QHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA  186 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~  186 (332)
                      |||+++|+|.+++.....           .....+++..++.++.||+.||.|||   ++||+||||||+||+++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence            999999999999976520           11246999999999999999999999   9999999999999999999999


Q ss_pred             EEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHh
Q 038681          187 KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       187 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~  264 (332)
                      ||+|||+++.......   .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.........      .
T Consensus       182 kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~------~  252 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------E  252 (327)
T ss_dssp             EECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------H
T ss_pred             EEcccCcCcccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH------H
Confidence            9999999874432221   133457889999999876 78999999999999999998 99999765433211      1


Q ss_pred             hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          265 RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .+...               .  ....+...+..+.+|+.+||+.||.+|||+.++++.|.++.+.
T Consensus       253 ~~~~~---------------~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          253 KLPQG---------------Y--RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HGGGT---------------C--CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HhhcC---------------C--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            11000               0  0011113347799999999999999999999999999998764


No 142
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2.4e-46  Score=352.20  Aligned_cols=182  Identities=23%  Similarity=0.364  Sum_probs=146.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.++++++|||||++              
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36799999999999999999998  78999999997643 33446789999999999999999987              


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+. |+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeeccccc
Confidence              8999985 6999999765     56999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCce-------------------------eeccccccCCCcccccccC-C-CCChhhhHHHHHHHHHHHHh
Q 038681          194 SLSIPDGETH-------------------------IELDSVVGTTGFIAPENFT-T-LINEQCDVYGFGAFLFELLT  243 (332)
Q Consensus       194 a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~~-~-~~~~~sDiwSlG~~l~ellt  243 (332)
                      |+........                         ......+||+.|+|||++. + .++.++|||||||++|||++
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            9876432210                         1124567899999999864 4 79999999999999999999


No 143
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=7e-47  Score=337.64  Aligned_cols=259  Identities=19%  Similarity=0.219  Sum_probs=191.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC----hhhHHHHHHHHHHHHhhc---CCCcceE-------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN----QHALEWCINHIVYASRMS---HKHIIKL-------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---H~nIv~~-------  115 (332)
                      ..++|++.+.||+|+||+||+|.+  +++.||+|++.....    ......+.+|+.+++.++   ||||+++       
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999997  889999999864321    111345667887777765   9999986       


Q ss_pred             ---------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCe
Q 038681          116 ---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA  186 (332)
Q Consensus       116 ---------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~  186 (332)
                               +||||++ |+|.+++.....   ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCE
Confidence                     7999997 599999986521   34899999999999999999999   9999999999999999999999


Q ss_pred             EEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhh
Q 038681          187 KLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR  265 (332)
Q Consensus       187 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~  265 (332)
                      ||+|||+++........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........  .....
T Consensus       160 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~i~~~  234 (308)
T 3g33_A          160 KLADFGLARIYSYQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG--KIFDL  234 (308)
T ss_dssp             EECSCSCTTTSTTCCCS---GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH--HHHHH
T ss_pred             EEeeCccccccCCCccc---CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHH
Confidence            99999999876544332   45678999999999976 89999999999999999999999998765543321  11111


Q ss_pred             hhc-cccchhhhh---hhhhhccc-CCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          266 LSG-QNCRFKEMV---DSIIIEDK-SCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       266 ~~~-~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ... ....+....   ........ ..........+..+.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            111 000010000   00000000 0000000134478899999999999999999999985


No 144
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.3e-47  Score=352.60  Aligned_cols=242  Identities=19%  Similarity=0.252  Sum_probs=186.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-------hhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-------QHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||+|++.....       ......+.+|+.++++++||||+++      
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            3467899999999999999999998  789999999875421       1123357899999999999999987      


Q ss_pred             ----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC---CeEE
Q 038681          116 ----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS---DAKL  188 (332)
Q Consensus       116 ----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl  188 (332)
                          +||||+++|+|.+++...     ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++   .+||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             CceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEE
Confidence                899999999999998765     57999999999999999999999   89999999999999997544   5999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      +|||+++........   ....||+.|+|||++.+    .++.++|||||||++|+|++|..||.........     ..
T Consensus       284 ~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~-----~~  355 (419)
T 3i6u_A          284 TDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----KD  355 (419)
T ss_dssp             CCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH-----HH
T ss_pred             eecccceecCCCccc---cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH-----HH
Confidence            999999876544322   45679999999999852    6889999999999999999999999765432221     11


Q ss_pred             hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          265 RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ........+.              .......+..+.+|+.+||+.||.+|||+.|+++
T Consensus       356 ~i~~~~~~~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          356 QITSGKYNFI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHTTCCCCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhcCCCCCC--------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            1111100000              0000123478999999999999999999999986


No 145
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=9.4e-47  Score=348.77  Aligned_cols=238  Identities=20%  Similarity=0.273  Sum_probs=181.9

Q ss_pred             cCCCCC-CccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE--------------
Q 038681           54 NNYDEQ-NIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL--------------  115 (332)
Q Consensus        54 ~~y~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~--------------  115 (332)
                      ++|.+. +.||+|+||.||+|.+  +++.||||++...      ..+.+|+.++.++ +||||+++              
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            456665 6899999999999999  7899999999643      4567889887555 89999986              


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEEeec
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFDF  191 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Df  191 (332)
                       |||||+++|+|.+++.....   ..+++..+..++.||+.||.|||   +++|+||||||+|||++.   ++.+||+||
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEEeCCCCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEec
Confidence             79999999999999976421   35999999999999999999999   899999999999999987   789999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      |+++........   ....||+.|+|||++.+ .++.++|||||||++|||++|..||...........  ....+    
T Consensus       209 G~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i----  279 (400)
T 1nxk_A          209 GFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRI----  279 (400)
T ss_dssp             TTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHH----
T ss_pred             ccccccCCCCcc---ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHH----
Confidence            999876543322   45678999999999987 899999999999999999999999976543221100  00000    


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                .......+.+.....+.++.+||.+||+.||.+|||+.++++
T Consensus       280 ----------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          280 ----------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             ----------HHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----------HcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                      001111111111234578999999999999999999999987


No 146
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.8e-47  Score=362.19  Aligned_cols=239  Identities=21%  Similarity=0.333  Sum_probs=198.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.....  ....+.+.+|+.++++++||||+++           +|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            35699999999999999999999  789999999865432  3346789999999999999999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLS  194 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a  194 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||+   +.++.+||+|||++
T Consensus       105 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             ECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            9999999999999765     57999999999999999999999   9999999999999999   56789999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      +........   ....||+.|+|||++.+.++.++|||||||++|+|++|..||..........      .+.       
T Consensus       177 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------~i~-------  240 (484)
T 3nyv_A          177 THFEASKKM---KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK------KVE-------  240 (484)
T ss_dssp             HHBCCCCSH---HHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHH-------
T ss_pred             EEccccccc---ccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHH------HHH-------
Confidence            877654432   4567999999999998899999999999999999999999998765433211      111       


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             ........+.....++.+.+|+.+||+.||.+|||+.++++
T Consensus       241 -------~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          241 -------KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             -------HCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -------cCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence                   11111111111234578999999999999999999999986


No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.4e-47  Score=344.08  Aligned_cols=250  Identities=20%  Similarity=0.250  Sum_probs=192.1

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC----ChhhHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR----NQHALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      ....++|.+.+.||+|+||.||+|.+  ++..||+|.+....    .....+.+.+|+.++++++||||+++        
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            34456799999999999999999998  78899999986542    23446789999999999999999997        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcc-----------------------------------cccCCCHHHHHHHHHHHHHHH
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQ-----------------------------------HFEALSLTDRLKVAMDIAHAV  157 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~i~~~L  157 (332)
                         +||||+++|+|.+++......                                   ....+++..++.++.||+.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence               899999999999999632110                                   012246788899999999999


Q ss_pred             HHhhhcCCCCeeecCCCCCCeeeCCCC--CeEEeecCCccccCCCC--ceeeccccccCCCcccccccCC---CCChhhh
Q 038681          158 AYLHVGFSRPIVYRDMKPTNILFNEQS--DAKLFDFSLSLSIPDGE--THIELDSVVGTTGFIAPENFTT---LINEQCD  230 (332)
Q Consensus       158 ~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~---~~~~~sD  230 (332)
                      .|||   +.+|+||||||+|||++.++  .+||+|||+++......  .........||+.|+|||++.+   .++.++|
T Consensus       182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D  258 (345)
T 3hko_A          182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD  258 (345)
T ss_dssp             HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred             HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence            9999   89999999999999998776  89999999998653321  1111245679999999999863   7899999


Q ss_pred             HHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCC
Q 038681          231 VYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFS  310 (332)
Q Consensus       231 iwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  310 (332)
                      ||||||++|||++|..||..........     .....               ......+.....++.+.+|+.+||+.|
T Consensus       259 iwslG~il~el~~g~~pf~~~~~~~~~~-----~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~  318 (345)
T 3hko_A          259 AWSAGVLLHLLLMGAVPFPGVNDADTIS-----QVLNK---------------KLCFENPNYNVLSPLARDLLSNLLNRN  318 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHHHC---------------CCCTTSGGGGGSCHHHHHHHHHHSCSC
T ss_pred             HHHHHHHHHHHHHCCCCCCCCChHHHHH-----HHHhc---------------ccccCCcccccCCHHHHHHHHHHcCCC
Confidence            9999999999999999998765433211     11111               110111111234478999999999999


Q ss_pred             CCCCCCHHHHHH
Q 038681          311 PEDRPTMVDVAK  322 (332)
Q Consensus       311 P~~RPs~~evl~  322 (332)
                      |.+|||+.++++
T Consensus       319 p~~Rps~~~~l~  330 (345)
T 3hko_A          319 VDERFDAMRALQ  330 (345)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhHCCCHHHHhc
Confidence            999999999987


No 148
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-46  Score=344.43  Aligned_cols=253  Identities=17%  Similarity=0.228  Sum_probs=190.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.... .....+.+.+|+.+++.++||||+++              
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46799999999999999999998  78999999996543 34446778999999999999999975              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+ +++|.+++..      ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence               899999 7899999875      36899999999999999999999   9999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++......     ....+|+.|+|||++.+  .++.++|||||||++|||++|+.||.+........  ..........
T Consensus       174 ~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~--~i~~~~g~~~  246 (367)
T 1cm8_A          174 LARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK--EIMKVTGTPP  246 (367)
T ss_dssp             TCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCC
T ss_pred             ccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCCC
Confidence            998765432     45678999999998875  78999999999999999999999998765443221  1111111111


Q ss_pred             cchhhhh-----hhhhhc----ccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMV-----DSIIIE----DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+...+     ...+..    ............++.+.+|+.+||+.||.+|||+.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            1110000     000000    000000011234578999999999999999999999986


No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=2.3e-46  Score=334.47  Aligned_cols=253  Identities=23%  Similarity=0.333  Sum_probs=191.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      ..++|.+.+.||+|+||.||+|.+  ++..||+|++....  .....+.+.+|+.++++++||||+++           +
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            346799999999999999999998  78999999997632  34456789999999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++..... ....+++..++.++.||+.||.|||   +.+|+|+||||+||+++.++.+||+|||++..
T Consensus       110 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF  185 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred             EEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence            9999999999999976422 1256899999999999999999999   99999999999999999999999999999976


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........    ........      
T Consensus       186 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~------  253 (310)
T 2wqm_A          186 FSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS----LCKKIEQC------  253 (310)
T ss_dssp             ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH----HHHHHHTT------
T ss_pred             ecCCCcc--ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH----HHHHhhcc------
Confidence            6543321  134578999999999987 8999999999999999999999999754322110    11111100      


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                              ..  +.......+..+.+|+.+||+.||.+|||+.+|++.|+++...
T Consensus       254 --------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          254 --------DY--PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             --------CS--CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------cC--CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence                    00  0000113347899999999999999999999999999998754


No 150
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=6.6e-47  Score=340.68  Aligned_cols=252  Identities=18%  Similarity=0.271  Sum_probs=198.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe-------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW-------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------  115 (332)
                      ..++|.+.+.||+|+||.||+|.+       ++..||||.+...........+.+|+.++++++||||+++         
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            457899999999999999999984       5668999999876666667789999999999999999998         


Q ss_pred             --EEEEeccCCChHHHHhhhhcc--cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEE
Q 038681          116 --IVFESVQIGTLADRIHHHCEQ--HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKL  188 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl  188 (332)
                        +||||+++|+|.+++......  ....+++..++.++.||+.||.|||   +.+|+||||||+|||++.   +..+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence              899999999999999875321  1135899999999999999999999   999999999999999984   446999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      +|||++................+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.........      ...
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~------~~~  258 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------EFV  258 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH------HHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH------HHH
Confidence            99999976543332222244568999999999876 89999999999999999998 99999765432211      111


Q ss_pred             hccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          267 SGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                      ...              .   ....+..++..+.+|+.+||+.||.+|||+.++++.|..+.+
T Consensus       259 ~~~--------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          259 TSG--------------G---RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HTT--------------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcC--------------C---CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            100              0   000111334779999999999999999999999999998764


No 151
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.1e-46  Score=335.90  Aligned_cols=237  Identities=21%  Similarity=0.283  Sum_probs=192.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....... .+.+.+|+.++.+++||||+++           +|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            35699999999999999999998  78999999998654322 4668899999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCccc
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSLS  196 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~~  196 (332)
                      |+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+||++   +.++.+||+|||++..
T Consensus        87 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           87 LVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             CCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             cCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            99999999999776     56999999999999999999999   8999999999999999   7889999999999976


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......    ....||+.|+|||++.+ .++.++|||||||++|+|++|..||........      ...+...      
T Consensus       159 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~i~~~------  222 (304)
T 2jam_A          159 EQNGIM----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL------FEKIKEG------  222 (304)
T ss_dssp             CCCBTT----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHC------
T ss_pred             cCCCcc----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHHcC------
Confidence            543321    34568999999999987 899999999999999999999999976543221      1111100      


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                              ......+.....+..+.+|+.+||+.||.+|||+.++++
T Consensus       223 --------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          223 --------YYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             --------CCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             --------CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                    000011111234478999999999999999999999986


No 152
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.6e-46  Score=346.15  Aligned_cols=238  Identities=19%  Similarity=0.293  Sum_probs=187.1

Q ss_pred             cCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhc--CCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNR-NQHALEWCINHIVYASRMS--HKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--H~nIv~~-----------lv~  118 (332)
                      ..|.+.+.||+|+||.||+|.+ .++.||||++.... .....+.+.+|+.++.+++  ||||+++           |||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4599999999999999999999 78899999997653 3445678999999999996  5999988           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      | +.+|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++ ++.+||+|||+++...
T Consensus       136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            9 5688999999876     57899999999999999999999   99999999999999995 5899999999998775


Q ss_pred             CCCceeeccccccCCCcccccccCC------------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT------------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      ............||+.|+|||++.+            .++.++|||||||++|||++|..||.........    ..   
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~----~~---  278 (390)
T 2zmd_A          206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK----LH---  278 (390)
T ss_dssp             --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH----HH---
T ss_pred             CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH----HH---
Confidence            5433222245679999999999853            6899999999999999999999999754321110    11   


Q ss_pred             hccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          267 SGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                              ..++......      .+...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       279 --------~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          279 --------AIIDPNHEIE------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             --------HHHCTTSCCC------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --------HHhCccccCC------CCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence                    1111100000      01112367899999999999999999999985


No 153
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.7e-46  Score=349.23  Aligned_cols=188  Identities=22%  Similarity=0.324  Sum_probs=159.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.++++++||||+++              
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46799999999999999999998  78999999997653 33446789999999999999999987              


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||++ |+|.+++...     ..+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence              8999986 5999999765     56999999999999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCce--------------------eeccccccCCCcccccccC-C-CCChhhhHHHHHHHHHHHHhCCccCC
Q 038681          194 SLSIPDGETH--------------------IELDSVVGTTGFIAPENFT-T-LINEQCDVYGFGAFLFELLTAQEVSD  249 (332)
Q Consensus       194 a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~~-~-~~~~~sDiwSlG~~l~elltg~~p~~  249 (332)
                      ++........                    .......||+.|+|||++. + .++.++|||||||++|||++|..||.
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            9876543211                    1124568999999999864 3 79999999999999999998655554


No 154
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.2e-47  Score=339.98  Aligned_cols=262  Identities=18%  Similarity=0.283  Sum_probs=204.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe------CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW------QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      .++|.+.+.||+|+||.||+|.+      +++.||+|++..... ...+.+.+|+.++++++||||+++           
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS-HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            45689999999999999999984      688999999987544 336789999999999999999987           


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||+
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             eEEEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence              8999999999999997652    35899999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCceee-ccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          194 SLSIPDGETHIE-LDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       194 a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +........... .....++..|+|||++.+ .++.++|||||||++|+|++|..||......       ..........
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-------~~~~~~~~~~  264 (326)
T 2w1i_A          192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-------FMRMIGNDKQ  264 (326)
T ss_dssp             CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-------HHHHHCTTCC
T ss_pred             hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-------HHHhhccccc
Confidence            987765443221 123457788999999876 7899999999999999999999998643211       0011100000


Q ss_pred             --chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          272 --RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                        .....+...+....  ..+.+..++.++.+|+.+||+.||++|||+.+|++.|+++.+++
T Consensus       265 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          265 GQMIVFHLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             THHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhhcCC--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence              00000111111111  11112345578999999999999999999999999999998764


No 155
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=4.8e-47  Score=345.97  Aligned_cols=269  Identities=17%  Similarity=0.211  Sum_probs=202.9

Q ss_pred             CCCcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-----CC
Q 038681           38 YNPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-----HK  110 (332)
Q Consensus        38 ~~~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~  110 (332)
                      ......++..+.....++|.+.+.||+|+||.||+|.+  +++.||||++...  ....+.+..|+.++..+.     ||
T Consensus        19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~   96 (360)
T 3llt_A           19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNN   96 (360)
T ss_dssp             -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGG
T ss_pred             CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCC
Confidence            34455666666666778999999999999999999999  8899999999754  233566788999999996     99


Q ss_pred             CcceE-----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 038681          111 HIIKL-----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNIL  179 (332)
Q Consensus       111 nIv~~-----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil  179 (332)
                      ||+++           +||||+ +++|.+++.....   ..+++..+..++.||+.||+|||   +++|+||||||+|||
T Consensus        97 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIl  169 (360)
T 3llt_A           97 NIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENIL  169 (360)
T ss_dssp             GBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             CeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEE
Confidence            99998           899999 8899999986521   35899999999999999999999   999999999999999


Q ss_pred             eCC-------------------------CCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHH
Q 038681          180 FNE-------------------------QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYG  233 (332)
Q Consensus       180 l~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwS  233 (332)
                      ++.                         ++.+||+|||+++......     ....||+.|+|||++.+ .++.++||||
T Consensus       170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diws  244 (360)
T 3llt_A          170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWS  244 (360)
T ss_dssp             ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred             EccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHH
Confidence            975                         7899999999998655433     35678999999999988 8999999999


Q ss_pred             HHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh-hhh--------hhh-hhcccCCCCCC------------
Q 038681          234 FGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK-EMV--------DSI-IIEDKSCTCTG------------  291 (332)
Q Consensus       234 lG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~-~~~~~~~~~~~------------  291 (332)
                      |||++|+|++|+.||...........  ........+..+. ...        +.. .....+.....            
T Consensus       245 lG~il~ell~g~~pf~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  322 (360)
T 3llt_A          245 FGCVLAELYTGSLLFRTHEHMEHLAM--MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP  322 (360)
T ss_dssp             HHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHH--HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc
Confidence            99999999999999987654432221  1111111110000 000        000 00000000000            


Q ss_pred             --hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          292 --KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       292 --~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                        .....+.+.+|+.+||+.||++|||+.|+++
T Consensus       323 ~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          323 LYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence              0011267889999999999999999999975


No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.7e-47  Score=342.91  Aligned_cols=229  Identities=21%  Similarity=0.270  Sum_probs=192.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-------hhHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-------HALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||.+......       ...+.+.+|+.++++++||||+++        
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46799999999999999999998  8999999999765321       124457889999999999999998        


Q ss_pred             ---EEEEeccCC-ChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeec
Q 038681          116 ---IVFESVQIG-TLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDF  191 (332)
Q Consensus       116 ---lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  191 (332)
                         +||||+.+| +|.+++...     ..+++..+..++.||+.||.|||   .++|+||||||+|||++.++.+||+||
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df  174 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF  174 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence               899999777 999999875     57999999999999999999999   899999999999999999999999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CC-ChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LI-NEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~-~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      |++.........   ....||+.|+|||++.+ .+ +.++|||||||++|+|++|..||........             
T Consensus       175 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------------  238 (335)
T 3dls_A          175 GSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-------------  238 (335)
T ss_dssp             TTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT-------------
T ss_pred             ccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh-------------
Confidence            999877655432   34679999999999987 44 8999999999999999999999975321100             


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               ....        .+...+.++.+|+.+||+.||.+|||+.++++
T Consensus       239 ---------~~~~--------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          239 ---------AAIH--------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             ---------TCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------hccC--------CCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     0000        00113367999999999999999999999987


No 157
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-47  Score=355.13  Aligned_cols=251  Identities=18%  Similarity=0.202  Sum_probs=199.3

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE----
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL----  115 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~----  115 (332)
                      +.+.++....++|++.+.||+|+||.||+|.+  +++.||+|++.....  ....+.+.+|..++..++||||+++    
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            44556666788999999999999999999999  789999999975321  1223457899999999999999987    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEE
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  188 (332)
                             |||||+++|+|.+++....    ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEE
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEE
Confidence                   8999999999999998651    36999999999999999999999   999999999999999999999999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccC--------CCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhH
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT--------TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYE  260 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~  260 (332)
                      +|||+++......... .....||+.|+|||++.        +.++.++|||||||++|||++|..||..........  
T Consensus       204 ~DFGla~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~--  280 (412)
T 2vd5_A          204 ADFGSCLKLRADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG--  280 (412)
T ss_dssp             CCCTTCEECCTTSCEE-CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--
T ss_pred             eechhheeccCCCccc-cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH--
Confidence            9999998776544322 13568999999999986        268999999999999999999999998765433211  


Q ss_pred             HHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 038681          261 ENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDR---PTMVDVAK  322 (332)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R---Ps~~evl~  322 (332)
                      ......              .....  + ......+.++.+||.+||. +|.+|   |+++|+++
T Consensus       281 ~i~~~~--------------~~~~~--p-~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          281 KIVHYK--------------EHLSL--P-LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHHTHH--------------HHCCC--C-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             HHHhcc--------------cCcCC--C-ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            000000              00000  0 0011334789999999999 99998   58988864


No 158
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=8.6e-47  Score=347.97  Aligned_cols=260  Identities=14%  Similarity=0.212  Sum_probs=195.5

Q ss_pred             HhcCCCCCCccccC--CCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           52 ATNNYDEQNIVLED--PFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ..++|++.+.||+|  +||.||+|.+  +++.||||++.... .....+.+.+|+.+++.++|||||++           
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45679999999999  9999999999  69999999997654 34446778899999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +||||+++|+|.+++.....   ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||.+.
T Consensus       103 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            89999999999999976421   45899999999999999999999   9999999999999999999999999999886


Q ss_pred             ccCCCCce-----eeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          196 SIPDGETH-----IELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       196 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      ........     .......||+.|+|||++.+   .++.++|||||||++|||++|..||..........     ....
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-----~~~~  251 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-----EKLN  251 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-----HC--
T ss_pred             eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-----HHhc
Confidence            54322111     11133478999999999876   68999999999999999999999998755443211     1110


Q ss_pred             ccccch------------------------hhhhhhhh---hcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 038681          268 GQNCRF------------------------KEMVDSII---IEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV  320 (332)
Q Consensus       268 ~~~~~~------------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ev  320 (332)
                      .....+                        .+......   ........+.....++.+.+|+.+||+.||++|||+.|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el  331 (389)
T 3gni_B          252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL  331 (389)
T ss_dssp             ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             CCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            000000                        00000000   000000111223455789999999999999999999999


Q ss_pred             HH
Q 038681          321 AK  322 (332)
Q Consensus       321 l~  322 (332)
                      ++
T Consensus       332 l~  333 (389)
T 3gni_B          332 LN  333 (389)
T ss_dssp             TT
T ss_pred             hc
Confidence            85


No 159
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=2.4e-47  Score=337.37  Aligned_cols=238  Identities=20%  Similarity=0.365  Sum_probs=191.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CC-------eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QK-------RSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  ++       ..||+|.+..... ...+.+.+|+.++++++||||+++        
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            46789999999999999999998  33       5699999876543 336789999999999999999997        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC-------
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD-------  185 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------  185 (332)
                         +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.       
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             CCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccc
Confidence               8999999999999998752    34999999999999999999999   999999999999999998887       


Q ss_pred             -eEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccC-CCCCccchhhhHH
Q 038681          186 -AKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVS-DHVSFESRFHYEE  261 (332)
Q Consensus       186 -~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~-~~~~~~~~~~~~~  261 (332)
                       +||+|||++......      ....||+.|+|||++.+  .++.++|||||||++|||++|..|+ ........     
T Consensus       159 ~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-----  227 (289)
T 4fvq_A          159 FIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-----  227 (289)
T ss_dssp             EEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----
T ss_pred             eeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-----
Confidence             999999998655332      33468999999999875  6899999999999999999965544 43322111     


Q ss_pred             HHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          262 NVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                       ......               ....+.    ..+..+.+|+.+||+.||.+|||+.++++.|+++..
T Consensus       228 -~~~~~~---------------~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          228 -LQFYED---------------RHQLPA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             -HHHHHT---------------TCCCCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             -HHHhhc---------------cCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             000000               000000    112568899999999999999999999999998764


No 160
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=5.3e-47  Score=345.73  Aligned_cols=256  Identities=18%  Similarity=0.220  Sum_probs=199.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|.+.........+.+.+|+.++++++||||+++           +|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            45799999999999999999999  6899999999887666667889999999999999999998           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++....
T Consensus       112 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  183 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  183 (360)
T ss_dssp             CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence            99999999999876     57999999999999999999999   74 99999999999999999999999999986553


Q ss_pred             CCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh-------------
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK-------------  264 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~-------------  264 (332)
                      ....    ....||+.|+|||++.+ .++.++|||||||++|+|++|..||................             
T Consensus       184 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (360)
T 3eqc_A          184 DSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT  259 (360)
T ss_dssp             HHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred             cccc----cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence            3221    34578999999999988 89999999999999999999999998655432211000000             


Q ss_pred             ---------hhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          265 ---------RLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       265 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               ..........+.++........  .......+.++.+|+.+||+.||++|||+.++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             --------------CCCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCcccccccCCCCcccchhhhhHHhccCCC--CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                     0000001111222222221111  1111234578999999999999999999999986


No 161
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.3e-46  Score=341.05  Aligned_cols=239  Identities=19%  Similarity=0.295  Sum_probs=185.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcC--CCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSH--KHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H--~nIv~~-----------lv  117 (332)
                      .+.|++.+.||+|+||.||+|.+ +++.||||++.... .....+.+.+|+.++.+++|  |||+++           +|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45699999999999999999999 88899999987653 34446789999999999986  999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      || +.+|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++ ++.+||+|||+++..
T Consensus        88 ~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EC-CCSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             Ee-CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            99 5678999999876     57999999999999999999999   89999999999999997 678999999999877


Q ss_pred             CCCCceeeccccccCCCcccccccC------------CCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFT------------TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKR  265 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~  265 (332)
                      .............||+.|+|||++.            ..++.++|||||||++|||++|..||.........    ..  
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~--  231 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK----LH--  231 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH----HH--
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH----HH--
Confidence            5544332224567999999999974            36889999999999999999999999754321110    00  


Q ss_pred             hhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          266 LSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               ..++....      ...+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       232 ---------~~~~~~~~------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          232 ---------AIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             ---------HHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---------HHhcCCcc------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence                     11110000      0011122367899999999999999999999986


No 162
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.2e-46  Score=331.82  Aligned_cols=244  Identities=21%  Similarity=0.301  Sum_probs=195.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-----hhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-----HALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|.+......     ...+.+.+|+.++++++||||+++           
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            5699999999999999999999  6899999998765322     136789999999999999999998           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC----CeEEeec
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS----DAKLFDF  191 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Df  191 (332)
                      +||||+++++|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+||+++.++    .+||+||
T Consensus        85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df  156 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF  156 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence            899999999999999765     57999999999999999999999   99999999999999998877    8999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      |++.........   ....||+.|+|||++.+ .++.++||||||+++|+|++|..||.........      .......
T Consensus       157 g~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~  227 (283)
T 3bhy_A          157 GIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL------TNISAVN  227 (283)
T ss_dssp             TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHTTC
T ss_pred             ccceeccCCCcc---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHH------HHhHhcc
Confidence            999876554322   34578999999999987 8999999999999999999999999875543221      1111100


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK--QLRQMY  328 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~--~L~~l~  328 (332)
                      ..+..              ......+..+.+|+.+||+.||++|||+.++++  .++.+.
T Consensus       228 ~~~~~--------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          228 YDFDE--------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CCCCH--------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             cCCcc--------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            00000              000123367899999999999999999999997  455554


No 163
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=9.4e-47  Score=337.48  Aligned_cols=233  Identities=16%  Similarity=0.187  Sum_probs=185.7

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      ++|++.++||+|+||+||+|.+  +++.||||++.... .......+..|+..+.++ +||||+++           +||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            5699999999999999999999  78999999987643 233355567777777666 89999987           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+ +|+|.+++....    ..+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus       137 e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             ECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             ecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999 679999987652    46999999999999999999999   8999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                      .....   ....||+.|+|||++.+.++.++|||||||++|||++|..|+.......         .+...  ....   
T Consensus       209 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---------~~~~~--~~~~---  271 (311)
T 3p1a_A          209 TAGAG---EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQ---------QLRQG--YLPP---  271 (311)
T ss_dssp             ---------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---------HHTTT--CCCH---
T ss_pred             cCCCC---cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---------HHhcc--CCCc---
Confidence            44322   3456999999999998899999999999999999999977665321110         01000  0000   


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ......+..+.+|+.+||+.||++|||+.++++
T Consensus       272 -----------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          272 -----------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             -----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -----------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                       001123478999999999999999999999985


No 164
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.6e-45  Score=333.36  Aligned_cols=263  Identities=18%  Similarity=0.278  Sum_probs=202.9

Q ss_pred             cccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHh--hcCCCcceE-----
Q 038681           43 IFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASR--MSHKHIIKL-----  115 (332)
Q Consensus        43 ~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~-----  115 (332)
                      ..+..--....++|.+.+.||+|+||.||+|.++++.||||.+....    ...+.+|.+++..  ++||||+++     
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~  106 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADN  106 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGG----HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchh----HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence            33444344456779999999999999999999999999999996542    4667889999988  789999987     


Q ss_pred             ----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCCeee
Q 038681          116 ----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF-----SRPIVYRDMKPTNILF  180 (332)
Q Consensus       116 ----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill  180 (332)
                                +||||+++|+|.+++...      .+++..++.++.||+.||.|||...     +.+|+||||||+|||+
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence                      899999999999999753      5899999999999999999999211     3689999999999999


Q ss_pred             CCCCCeEEeecCCccccCCCCcee--eccccccCCCcccccccCCC-------CChhhhHHHHHHHHHHHHhC-------
Q 038681          181 NEQSDAKLFDFSLSLSIPDGETHI--ELDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLTA-------  244 (332)
Q Consensus       181 ~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-------~~~~sDiwSlG~~l~elltg-------  244 (332)
                      +.++.+||+|||++..........  ......||+.|+|||++.+.       ++.++|||||||++|||++|       
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~  260 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  260 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence            999999999999997765543221  12445799999999998762       23689999999999999999       


Q ss_pred             ---CccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCC---ChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038681          245 ---QEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCT---GKEQQLQAFKQLTLQCMDFSPEDRPTMV  318 (332)
Q Consensus       245 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dP~~RPs~~  318 (332)
                         ..||..........               ..+.............+   .....+..+.+|+.+||+.||++|||+.
T Consensus       261 ~~~~~p~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~  325 (342)
T 1b6c_B          261 EDYQLPYYDLVPSDPSV---------------EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  325 (342)
T ss_dssp             CCCCCTTTTTSCSSCCH---------------HHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cccccCccccCcCcccH---------------HHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence               66765543221110               01111000000000000   1236678899999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 038681          319 DVAKQLRQMYRS  330 (332)
Q Consensus       319 evl~~L~~l~~~  330 (332)
                      +|++.|+++.++
T Consensus       326 ~i~~~L~~i~~~  337 (342)
T 1b6c_B          326 RIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH
Confidence            999999999865


No 165
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=4.6e-47  Score=347.29  Aligned_cols=235  Identities=19%  Similarity=0.257  Sum_probs=183.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHH-HHhhcCCCcceE-----------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVY-ASRMSHKHIIKL-----------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~H~nIv~~-----------l  116 (332)
                      .++|++.+.||+|+||.||+|++  ++..||+|++.....  ......+.+|..+ ++.++||||+++           +
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            46799999999999999999999  788999999976532  2234556777777 467899999997           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++...     ..+++..++.++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||+++.
T Consensus       117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            99999999999999876     57999999999999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......  .....||+.|+|||++.+ .++.++|||||||++|||++|..||.........      ..+         
T Consensus       189 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~------~~i---------  251 (373)
T 2r5t_A          189 NIEHNST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY------DNI---------  251 (373)
T ss_dssp             GBCCCCC--CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH------HHH---------
T ss_pred             cccCCCc--cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH------HHH---------
Confidence            4332221  146689999999999988 8999999999999999999999999765433221      111         


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVA  321 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl  321 (332)
                           +.....    .+...+..+.+|+.+||+.||.+||++.+.+
T Consensus       252 -----~~~~~~----~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          252 -----LNKPLQ----LKPNITNSARHLLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             -----HHSCCC----CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred             -----HhcccC----CCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence                 111110    0112347789999999999999999985433


No 166
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=2e-47  Score=343.76  Aligned_cols=257  Identities=19%  Similarity=0.305  Sum_probs=188.6

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|++...........+.+|+.++++++||||+++           +||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5789999999999999999999  7899999999765543323346689999999999999998           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCC
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDG  200 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  200 (332)
                      ++ |+|.+++....    ..+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             CS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             cc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            97 59999987652    45899999999999999999999   999999999999999999999999999999765443


Q ss_pred             CceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-cccchhhhh
Q 038681          201 ETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-QNCRFKEMV  277 (332)
Q Consensus       201 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  277 (332)
                      ...  .....||+.|+|||++.+  .++.++|||||||++|+|++|..||......+....  ....... ....+....
T Consensus       154 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~~  229 (324)
T 3mtl_A          154 TKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF--IFRILGTPTEETWPGIL  229 (324)
T ss_dssp             -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCCCCTTTSTTGG
T ss_pred             ccc--cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhCCCChHhchhhh
Confidence            322  134578999999999876  689999999999999999999999987665443221  1111111 111111111


Q ss_pred             hhhhhcccCCC---C----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          278 DSIIIEDKSCT---C----TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       278 ~~~~~~~~~~~---~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..........+   .    ......+.++.+|+.+||+.||.+|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            11100000000   0    001133477899999999999999999999986


No 167
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.9e-46  Score=364.05  Aligned_cols=241  Identities=17%  Similarity=0.275  Sum_probs=194.1

Q ss_pred             ccccCCCceEEEEEe----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------EEEEeccCCCh
Q 038681           61 IVLEDPFRKLYKGFW----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------IVFESVQIGTL  126 (332)
Q Consensus        61 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------lv~e~~~~g~L  126 (332)
                      .||+|+||.||+|.+    ++..||||.++........+.+.+|+.++++++|||||++          |||||+++|+|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            799999999999987    4567999999876655557889999999999999999998          89999999999


Q ss_pred             HHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCceee-
Q 038681          127 ADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIE-  205 (332)
Q Consensus       127 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-  205 (332)
                      .+++...    ...+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.......... 
T Consensus       423 ~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  495 (613)
T 2ozo_A          423 HKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA  495 (613)
T ss_dssp             HHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred             HHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence            9999754    146999999999999999999999   99999999999999999999999999999987654332111 


Q ss_pred             ccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhc
Q 038681          206 LDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIE  283 (332)
Q Consensus       206 ~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (332)
                      .....+|+.|+|||++.+ .++.++|||||||++|||++ |..||......+...      .+..               
T Consensus       496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~------~i~~---------------  554 (613)
T 2ozo_A          496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA------FIEQ---------------  554 (613)
T ss_dssp             ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH------HHHT---------------
T ss_pred             ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH------HHHc---------------
Confidence            123345789999999986 89999999999999999998 999998765433211      1110               


Q ss_pred             ccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          284 DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      ..  ....+..++..+.+||.+||+.||++|||+.+|++.|+.++.++
T Consensus       555 ~~--~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          555 GK--RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             TC--CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CC--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            00  01111234578999999999999999999999999999987653


No 168
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.7e-46  Score=343.12  Aligned_cols=248  Identities=15%  Similarity=0.191  Sum_probs=198.5

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEE-----e--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc---CCCcceE--
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGF-----W--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS---HKHIIKL--  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~-----~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~--  115 (332)
                      ++....++|.+.+.||+|+||.||+|.     .  .++.||+|++....    ...+..|+.++..++   |+||+++  
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            344556779999999999999999994     3  78899999997653    456778888888876   9999987  


Q ss_pred             ---------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC----
Q 038681          116 ---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE----  182 (332)
Q Consensus       116 ---------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~----  182 (332)
                               |||||+++|+|.+++..........+++..++.++.||+.||+|||   +++|+||||||+|||++.    
T Consensus       135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTC
T ss_pred             eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccC
Confidence                     8999999999999998654333357999999999999999999999   999999999999999998    


Q ss_pred             -------CCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCcc
Q 038681          183 -------QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFE  254 (332)
Q Consensus       183 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~  254 (332)
                             ++.+||+|||+|+...............||+.|+|||++.+ .++.++|||||||++|||++|+.||......
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  291 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG  291 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence                   89999999999976543222222356789999999999988 7899999999999999999999998643221


Q ss_pred             chhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHHHHh
Q 038681          255 SRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDR-PTMVDVAKQLRQMYRS  330 (332)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R-Ps~~evl~~L~~l~~~  330 (332)
                      ...               ....+.         ..    ...+.+.+++..||+.+|.+| |++.++.+.|+.++..
T Consensus       292 ~~~---------------~~~~~~---------~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          292 ECK---------------PEGLFR---------RL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             EEE---------------ECSCCT---------TC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cee---------------echhcc---------cc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            100               000000         00    113567899999999999999 6788899888887754


No 169
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=7.1e-47  Score=343.10  Aligned_cols=253  Identities=15%  Similarity=0.149  Sum_probs=188.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChh----------hHHHHHHHHHHHHhhcCCCcceE--
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQH----------ALEWCINHIVYASRMSHKHIIKL--  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~nIv~~--  115 (332)
                      .++|.+.+.||+|+||.||+|.+     .+..+|+|+........          ....+.+|+..+..++||||+++  
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            46799999999999999999998     45789999988764321          11236788889999999999986  


Q ss_pred             -------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC
Q 038681          116 -------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE  182 (332)
Q Consensus       116 -------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~  182 (332)
                                   +||||+ +++|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+|||++.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY  186 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence                         899999 99999999876     47999999999999999999999   899999999999999988


Q ss_pred             CC--CeEEeecCCccccCCCCce-----eeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCcc
Q 038681          183 QS--DAKLFDFSLSLSIPDGETH-----IELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFE  254 (332)
Q Consensus       183 ~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~  254 (332)
                      ++  .+||+|||+++........     .......||+.|+|||++.+ .++.++|||||||++|||++|..||......
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  266 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD  266 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence            77  9999999999776432211     11134579999999999988 7999999999999999999999999653222


Q ss_pred             chhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          255 SRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      ...... .....   ...+...+.....         ....+..+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus       267 ~~~~~~-~~~~~---~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          267 PVAVQT-AKTNL---LDELPQSVLKWAP---------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHH-HHHHH---HHTTTHHHHHHSC---------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             cHHHHH-HHHhh---cccccHHHHhhcc---------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            211100 00000   0011111110000         002336899999999999999999999999999764


No 170
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.8e-46  Score=340.78  Aligned_cols=233  Identities=21%  Similarity=0.305  Sum_probs=190.9

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      +.|...+.||+|+||.||+|.+  +++.||||++.....  ....+.+.+|+.++++++||||+++           +||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588899999999999999998  899999999976532  3345678999999999999999997           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||++ |+|.+++....    ..+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||++....
T Consensus       134 e~~~-g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             ECCS-EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             ecCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            9997 68888886542    46999999999999999999999   8999999999999999999999999999997664


Q ss_pred             CCCceeeccccccCCCcccccccC----CCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFT----TLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFK  274 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (332)
                      ..      ....||+.|+|||++.    +.++.++|||||||++|||++|..||.........     .........   
T Consensus       206 ~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-----~~~~~~~~~---  271 (348)
T 1u5q_A          206 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-----YHIAQNESP---  271 (348)
T ss_dssp             SB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCC---
T ss_pred             CC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHHhcCCC---
Confidence            32      3457999999999883    37899999999999999999999999765432221     111111000   


Q ss_pred             hhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          275 EMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .......+..+.+|+.+||+.||++|||+.++++
T Consensus       272 --------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          272 --------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             --------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                          0011133477899999999999999999999975


No 171
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=2.3e-46  Score=342.14  Aligned_cols=258  Identities=19%  Similarity=0.253  Sum_probs=198.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||||++.........+.+.+|+.++.+++||||+++               
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            46799999999999999999998  7899999999876666667889999999999999999975               


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||++ |+|.+++...      .+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||++
T Consensus       106 ~iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence             8999997 5999998653      6999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCcee-eccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          195 LSIPDGETHI-ELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       195 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +......... ......||+.|+|||++.+  .++.++|||||||++|+|++|..||...........  ..........
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--i~~~~~~~~~  253 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH--ILGILGSPSQ  253 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHH--HHHHHCSCCH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHH--HHHHhCCCCH
Confidence            8765432211 1234579999999998754  689999999999999999999999987665443221  1111111000


Q ss_pred             c-hhhhhhh---hhhcccCCCCC-----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 R-FKEMVDS---IIIEDKSCTCT-----GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~-~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      . +....+.   ......+....     .....+.++.+|+.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0 0000000   00000000000     00123477999999999999999999999986


No 172
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.3e-46  Score=330.93  Aligned_cols=243  Identities=17%  Similarity=0.289  Sum_probs=195.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-------------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-------------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-------------l  116 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|.+.... .....+.+.+|+.++++++||||+++             +
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            46799999999999999999999  78999999997654 34446789999999999999999987             8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----eeecCCCCCCeeeCCCCCeEEeec
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP-----IVYRDMKPTNILFNEQSDAKLFDF  191 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Df  191 (332)
                      ||||+++|+|.+++..... ....+++..++.++.||+.||.|||   +.+     |+||||||+||+++.++.+||+||
T Consensus        85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            9999999999999986522 1245999999999999999999999   777     999999999999999999999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      |+++........  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||........      ...+... 
T Consensus       161 g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~i~~~-  231 (279)
T 2w5a_A          161 GLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL------AGKIREG-  231 (279)
T ss_dssp             CHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHT-
T ss_pred             chheeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH------HHHHhhc-
Confidence            999876544321  134578999999999987 889999999999999999999999986543221      1111000 


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL  324 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L  324 (332)
                                   ..   ...+...+..+.+++.+||+.||.+|||+.+|++.+
T Consensus       232 -------------~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          232 -------------KF---RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             -------------CC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             -------------cc---ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence                         00   001113347899999999999999999999998754


No 173
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=4e-46  Score=340.69  Aligned_cols=242  Identities=23%  Similarity=0.355  Sum_probs=195.7

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-------hhhHHHHHHHHHHHHhh-cCCCcceE----
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-------QHALEWCINHIVYASRM-SHKHIIKL----  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l-~H~nIv~~----  115 (332)
                      ....++|.+.+.||+|+||.||+|.+  +|+.||||++.....       ....+.+.+|+.++.++ +||||+++    
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            34456799999999999999999998  689999999876532       12245688999999999 79999987    


Q ss_pred             -------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEE
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  188 (332)
                             +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.||+|+||||+|||++.++.+||
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl  241 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL  241 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence                   899999999999999865     57999999999999999999999   899999999999999999999999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC-------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHH
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEE  261 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~  261 (332)
                      +|||++.........   ....||+.|+|||++.+       .++.++|||||||++|+|++|..||.........    
T Consensus       242 ~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~----  314 (365)
T 2y7j_A          242 SDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML----  314 (365)
T ss_dssp             CCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----
T ss_pred             EecCcccccCCCccc---ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH----
Confidence            999999877654332   45679999999998752       5788999999999999999999999765432211    


Q ss_pred             HHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          262 NVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                        ..+......+              ..+.....+..+.+|+.+||+.||++|||+.++++
T Consensus       315 --~~i~~~~~~~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          315 --RMIMEGQYQF--------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             --HHHHHTCCCC--------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --HHHHhCCCCC--------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              1111000000              00000122367999999999999999999999986


No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.1e-46  Score=329.63  Aligned_cols=234  Identities=20%  Similarity=0.315  Sum_probs=194.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|.+.....  ....+.+.+|+.++++++||||+++           +|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            46799999999999999999999  688999999865421  2225678999999999999999987           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus        93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            9999999999999876     56999999999999999999999   999999999999999999999999999999765


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .....    ....||+.|+|||++.+ .++.++||||||+++|+|++|..||.........      ..+.....     
T Consensus       165 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~~~-----  229 (284)
T 2vgo_A          165 PSLRR----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH------RRIVNVDL-----  229 (284)
T ss_dssp             SSSCB----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHTTCC-----
T ss_pred             ccccc----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH------HHHhcccc-----
Confidence            54322    34578999999999987 7899999999999999999999999765432211      11110000     


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                   ..+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       230 -------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          230 -------------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -------------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                         011123467899999999999999999999986


No 175
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.7e-48  Score=345.46  Aligned_cols=252  Identities=18%  Similarity=0.296  Sum_probs=179.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHh--hcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASR--MSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.++++.||||++....    ...+.+|.+++..  ++||||+++               
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEcCcceEEEEecccc----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            3579999999999999999999999999999986543    4567788888887  799999987               


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF-----SRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                      +||||+++|+|.+++...      .+++..++.++.|++.||.|||...     +.+|+||||||+|||++.++.+||+|
T Consensus        78 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  151 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred             EEEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence            899999999999999653      5888899999999999999999321     57999999999999999999999999


Q ss_pred             cCCccccCCCCceee--ccccccCCCcccccccCCC-------CChhhhHHHHHHHHHHHHhCC----------ccCCCC
Q 038681          191 FSLSLSIPDGETHIE--LDSVVGTTGFIAPENFTTL-------INEQCDVYGFGAFLFELLTAQ----------EVSDHV  251 (332)
Q Consensus       191 fg~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-------~~~~sDiwSlG~~l~elltg~----------~p~~~~  251 (332)
                      ||+++..........  .....||+.|+|||++.+.       ++.++|||||||++|||++|.          .||...
T Consensus       152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~  231 (303)
T 3gxj_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred             cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence            999976654433211  1334799999999998762       236899999999999999994          444332


Q ss_pred             CccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCC---CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 038681          252 SFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTC---TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY  328 (332)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~  328 (332)
                      .....               ..................   ......+..+.+|+.+||+.||.+|||+.+|++.|+++.
T Consensus       232 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~  296 (303)
T 3gxj_A          232 VPSDP---------------SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CC-CC---------------CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred             CCCCc---------------cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence            21110               011111111111100000   111366778999999999999999999999999999876


Q ss_pred             H
Q 038681          329 R  329 (332)
Q Consensus       329 ~  329 (332)
                      +
T Consensus       297 ~  297 (303)
T 3gxj_A          297 Q  297 (303)
T ss_dssp             C
T ss_pred             h
Confidence            4


No 176
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.6e-47  Score=364.88  Aligned_cols=252  Identities=21%  Similarity=0.308  Sum_probs=205.1

Q ss_pred             HHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------
Q 038681           46 AEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------  115 (332)
Q Consensus        46 ~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------  115 (332)
                      .+.+++..++|.+.+.||+|+||.||+|.+ .+..||||++......  .+.+.+|+.++++++||||+++         
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEeeccc
Confidence            445666677899999999999999999999 5678999999875432  5679999999999999999998         


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       |||||+++|+|.+++.....   ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  410 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA  410 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred             eEeeehhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence             89999999999999975421   35899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      +........ ......++..|+|||++.+ .++.++|||||||++|||++ |..||......+...      .+..    
T Consensus       411 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~------~i~~----  479 (535)
T 2h8h_A          411 RLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD------QVER----  479 (535)
T ss_dssp             TTCCCHHHH-TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH------HHHT----
T ss_pred             eecCCCcee-cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc----
Confidence            876542211 1123456789999999876 89999999999999999999 999997654332211      1100    


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                 ..  ..+.+..++..+.+||.+||+.||++|||+.+|++.|+.+..
T Consensus       480 -----------~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          480 -----------GY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             -----------TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             -----------CC--CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence                       00  011112345789999999999999999999999999988754


No 177
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=3.9e-46  Score=331.97  Aligned_cols=237  Identities=20%  Similarity=0.315  Sum_probs=197.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ...|.+.+.||+|+||.||+|.+  +++.||+|.+.........+.+.+|+.++.+++||||+++           +|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35599999999999999999998  7899999999877655557889999999999999999987           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |+++++|.+++..      ..+++..+..++.||+.||.|||   +.||+|+||||+||+++.++.+||+|||++.....
T Consensus       101 ~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          101 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             CCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            9999999999865      36999999999999999999999   89999999999999999999999999999977654


Q ss_pred             CCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                      ....  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........     .......        
T Consensus       172 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~--------  236 (303)
T 3a7i_A          172 TQIK--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-----LIPKNNP--------  236 (303)
T ss_dssp             TBCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCC--------
T ss_pred             cccc--cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-----HhhcCCC--------
Confidence            3321  145678999999999987 88999999999999999999999997654322111     0000000        


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQ  323 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~  323 (332)
                                .......+..+.+|+.+||+.||.+|||+.++++.
T Consensus       237 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          237 ----------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             ----------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ----------CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                      00111234679999999999999999999999873


No 178
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=6.2e-46  Score=340.19  Aligned_cols=254  Identities=17%  Similarity=0.248  Sum_probs=186.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.+++.++||||+++              
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46799999999999999999998  78999999997643 34446778999999999999999976              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+++ +|.+++..       .+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ceEEEEEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEee
Confidence               89999975 78888853       4899999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      +++........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........  ..........+
T Consensus       173 ~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~  247 (371)
T 2xrw_A          173 LARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN--KVIEQLGTPCP  247 (371)
T ss_dssp             C-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHC-CCCCCH
T ss_pred             ccccccccccc---CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCH
Confidence            99866543221   34679999999999988 89999999999999999999999998765433211  11111110000


Q ss_pred             chhhhhh----hhhhccc----------------CCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 RFKEMVD----SIIIEDK----------------SCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~~~~~~~----~~~~~~~----------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+...+.    .......                +.........+..+.+|+.+||+.||.+|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            0000000    0000000                0011112244678999999999999999999999987


No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=7.2e-47  Score=347.10  Aligned_cols=237  Identities=13%  Similarity=0.144  Sum_probs=183.0

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCC--CChhhHHHHHHHH---HHHHhhcCCCcce------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGN--RNQHALEWCINHI---VYASRMSHKHIIK------------  114 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~~~~~E~---~~l~~l~H~nIv~------------  114 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||||++...  ......+.+.+|+   .++++++|||||+            
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            5688889999999999999997  6999999999743  2234467899999   5555568999963            


Q ss_pred             -----------------------EEEEEeccCCChHHHHhhhhccc--ccCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 038681          115 -----------------------LIVFESVQIGTLADRIHHHCEQH--FEALSLTDRLKVAMDIAHAVAYLHVGFSRPIV  169 (332)
Q Consensus       115 -----------------------~lv~e~~~~g~L~~~l~~~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv  169 (332)
                                             +|||||+ +|+|.+++.....-.  ...+++..++.++.||+.||+|||   +++|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv  228 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV  228 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence                                   4899999 679999998752110  122445888899999999999999   89999


Q ss_pred             ecCCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC------------CCChhhhHHHHHHH
Q 038681          170 YRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT------------LINEQCDVYGFGAF  237 (332)
Q Consensus       170 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~sDiwSlG~~  237 (332)
                      ||||||+|||++.++.+||+|||+++.....     .....| +.|+|||++.+            .++.++|||||||+
T Consensus       229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999864331     134567 99999999864            48999999999999


Q ss_pred             HHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH
Q 038681          238 LFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM  317 (332)
Q Consensus       238 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~  317 (332)
                      +|||++|..||..........      ..              ....        ...++.+.+|+.+||+.||++|||+
T Consensus       303 l~elltg~~Pf~~~~~~~~~~------~~--------------~~~~--------~~~~~~~~~li~~~L~~dp~~Rpt~  354 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSE------WI--------------FRSC--------KNIPQPVRALLEGFLRYPKEDRLLP  354 (377)
T ss_dssp             HHHHHHSSCCC------CCSG------GG--------------GSSC--------CCCCHHHHHHHHHHTCSSGGGCCCH
T ss_pred             HHHHHHCCCCCcccccccchh------hh--------------hhhc--------cCCCHHHHHHHHHHcCCCchhCCCH
Confidence            999999999997654322111      00              0000        1223679999999999999999999


Q ss_pred             HHHHH--HHHHHH
Q 038681          318 VDVAK--QLRQMY  328 (332)
Q Consensus       318 ~evl~--~L~~l~  328 (332)
                      .++++  .++.+.
T Consensus       355 ~e~l~hp~f~~~~  367 (377)
T 3byv_A          355 LQAMETPEYEQLR  367 (377)
T ss_dssp             HHHHTSHHHHHHH
T ss_pred             HHHhhChHHHHHH
Confidence            99986  444443


No 180
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.6e-46  Score=364.08  Aligned_cols=241  Identities=18%  Similarity=0.297  Sum_probs=194.6

Q ss_pred             CccccCCCceEEEEEe----CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE----------EEEEeccCC
Q 038681           60 NIVLEDPFRKLYKGFW----QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL----------IVFESVQIG  124 (332)
Q Consensus        60 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~----------lv~e~~~~g  124 (332)
                      +.||+|+||.||+|.+    .+..||||+++.... ....+.+.+|+.++.+++|||||++          |||||+++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            3699999999999976    457899999986532 3446789999999999999999998          899999999


Q ss_pred             ChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCcee
Q 038681          125 TLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHI  204 (332)
Q Consensus       125 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  204 (332)
                      +|.+++...     ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.........
T Consensus       455 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          455 PLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  526 (635)
T ss_dssp             EHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred             CHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence            999999765     56999999999999999999999   9999999999999999999999999999998765443221


Q ss_pred             -eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhh
Q 038681          205 -ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSII  281 (332)
Q Consensus       205 -~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (332)
                       ......+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..             
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~------~i~~-------------  587 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA------MLEK-------------  587 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH------HHHT-------------
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH------HHHc-------------
Confidence             1133456788999999987 89999999999999999998 999998765433211      1100             


Q ss_pred             hcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          282 IEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                        ..  ....+..++.++.+||.+||+.||++|||+.+|++.|+++..++
T Consensus       588 --~~--~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          588 --GE--RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             --TC--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             --CC--CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence              00  00111234478999999999999999999999999999998765


No 181
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.8e-47  Score=344.11  Aligned_cols=252  Identities=14%  Similarity=0.189  Sum_probs=196.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-C---------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcce--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-Q---------KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK--------  114 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------  114 (332)
                      .++|.+.+.||+|+||.||+|.+ .         ++.||+|.+...      +.+.+|+.++.+++||||++        
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~  114 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST  114 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence            46799999999999999999998 2         688999998764      35789999999999999986        


Q ss_pred             -------------------EEEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 038681          115 -------------------LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKP  175 (332)
Q Consensus       115 -------------------~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp  175 (332)
                                         ++||||+ +|+|.+++....   ...+++..++.++.||+.||.|||   +++|+||||||
T Consensus       115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp  187 (352)
T 2jii_A          115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTA  187 (352)
T ss_dssp             TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCG
T ss_pred             CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCH
Confidence                               2899999 999999998642   146999999999999999999999   89999999999


Q ss_pred             CCeeeCCCC--CeEEeecCCccccCCCCcee-----eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCcc
Q 038681          176 TNILFNEQS--DAKLFDFSLSLSIPDGETHI-----ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEV  247 (332)
Q Consensus       176 ~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p  247 (332)
                      +|||++.++  .+||+|||+++.........     ......||+.|+|||++.+ .++.++|||||||++|||++|..|
T Consensus       188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999998  89999999997664322110     1134579999999999988 899999999999999999999999


Q ss_pred             CCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 038681          248 SDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQM  327 (332)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l  327 (332)
                      |............ ...........+.   +         ........+..+.+|+.+||+.||++|||+++|++.|+++
T Consensus       268 f~~~~~~~~~~~~-~~~~~~~~~~~~~---~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          268 WTNCLPNTEDIMK-QKQKFVDKPGPFV---G---------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             TGGGTTCHHHHHH-HHHHHHHSCCCEE---C---------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             cccCCcCHHHHHH-HHHhccCChhhhh---h---------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            9865422211100 1110000000000   0         0000012347899999999999999999999999999999


Q ss_pred             HHh
Q 038681          328 YRS  330 (332)
Q Consensus       328 ~~~  330 (332)
                      .+.
T Consensus       335 ~~~  337 (352)
T 2jii_A          335 LQD  337 (352)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865


No 182
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=5.1e-47  Score=347.37  Aligned_cols=242  Identities=10%  Similarity=0.059  Sum_probs=180.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhh--cCCCcce------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRM--SHKHIIK------------  114 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l--~H~nIv~------------  114 (332)
                      ..+|.+.+.||+|+||.||+|.+  +++.||||++.....  ....+.+.+|+.++..+  +||||++            
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            34588999999999999999998  789999999987653  34466778886655555  5999775            


Q ss_pred             -----------------------EEEEEeccCCChHHHHhhhhcccccCCCHHHH------HHHHHHHHHHHHHhhhcCC
Q 038681          115 -----------------------LIVFESVQIGTLADRIHHHCEQHFEALSLTDR------LKVAMDIAHAVAYLHVGFS  165 (332)
Q Consensus       115 -----------------------~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~  165 (332)
                                             +|||||++ |+|.+++....    ..+++..+      ..++.||+.||+|||   +
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~  212 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ---S  212 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH---H
Confidence                                   48999999 89999998752    23455555      678899999999999   9


Q ss_pred             CCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHH
Q 038681          166 RPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELL  242 (332)
Q Consensus       166 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~ell  242 (332)
                      ++|+||||||+|||++.++.+||+|||+++......     ....+|+.|+|||++.+   .++.++|||||||++|||+
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell  287 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW  287 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence            999999999999999999999999999998664322     24567799999999975   6899999999999999999


Q ss_pred             hCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          243 TAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       243 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      +|+.||..........+...         ..      ..........+.....++.+.+|+.+||+.||++|||+.++++
T Consensus       288 tg~~Pf~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          288 CLFLPFGLVTPGIKGSWKRP---------SL------RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HSSCSTTBCCTTCTTCCCBC---------CT------TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             hCCCCCCCcCcccccchhhh---------hh------hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99999987643221110000         00      0000000011111234578999999999999999999999975


No 183
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=6.4e-47  Score=342.50  Aligned_cols=245  Identities=16%  Similarity=0.241  Sum_probs=193.4

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHH-HHhhcCCCcceE----------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVY-ASRMSHKHIIKL----------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~~----------  115 (332)
                      +....++|++.+.||+|+||.||+|.+  +++.||||++...........+..|..+ ++.++||||+++          
T Consensus        46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~  125 (340)
T 3an0_A           46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV  125 (340)
T ss_dssp             CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred             eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence            344567899999999999999999998  8999999999876554445666777766 677899999998          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                       +||||+++ +|.+++...... ...+++..++.++.||+.||.|||   ++ ||+||||||+|||++.++.+||+|||+
T Consensus       126 ~lv~e~~~~-~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  200 (340)
T 3an0_A          126 WICMELMDT-SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGI  200 (340)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred             EEEHHHhhC-cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCC
Confidence             89999975 999998754222 257999999999999999999999   76 999999999999999999999999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccC----C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFT----T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG  268 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~  268 (332)
                      ++........   ....||+.|+|||++.    + .++.++|||||||++|||++|..||.........    .......
T Consensus       201 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~  273 (340)
T 3an0_A          201 SGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----LKQVVEE  273 (340)
T ss_dssp             HHHHSCHHHH---HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH----HHHHHHS
T ss_pred             ceeccccccc---ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHH----HHHHhcC
Confidence            9776543211   3357999999999964    2 6899999999999999999999999754321110    1111111


Q ss_pred             cccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          269 QNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...                 .......+..+.+|+.+||+.||++|||+.++++
T Consensus       274 ~~~-----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          274 PSP-----------------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCC-----------------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            000                 0011133478999999999999999999999986


No 184
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.7e-46  Score=338.38  Aligned_cols=260  Identities=15%  Similarity=0.199  Sum_probs=186.8

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ....++|.+.+.||+|+||.||+|.+  +++.||||++..... ....+.+.+|+.++++++||||+++           
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34467899999999999999999998  899999999976543 2335667899999999999999997           


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC-----CCCCeEEee
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-----EQSDAKLFD  190 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-----~~~~~kl~D  190 (332)
                      +||||++ |+|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+|||++     .++.+||+|
T Consensus       110 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D  180 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGD  180 (329)
T ss_dssp             EEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred             EEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECc
Confidence            8999998 4999999876     56999999999999999999999   89999999999999994     445599999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG  268 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~  268 (332)
                      ||+++........  .....||+.|+|||++.+  .++.++|||||||++|||++|..||..........  ........
T Consensus       181 fg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~  256 (329)
T 3gbz_A          181 FGLARAFGIPIRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF--KIFEVLGL  256 (329)
T ss_dssp             TTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCC
T ss_pred             CCCccccCCcccc--cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH--HHHHHhCC
Confidence            9999876543222  134578999999999976  58999999999999999999999998765433221  11111111


Q ss_pred             -cccchhhhhhhhh-hcccC-CCCC-----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          269 -QNCRFKEMVDSII-IEDKS-CTCT-----GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       269 -~~~~~~~~~~~~~-~~~~~-~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                       ....+........ ....+ ....     .....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence             0000000000000 00000 0000     00113477899999999999999999999986


No 185
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=9.5e-47  Score=337.97  Aligned_cols=252  Identities=20%  Similarity=0.232  Sum_probs=197.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||+|++.... ....+.+.+|+.+++.++||||+++             
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            4567899999999999999999998  88999999986643 3346789999999999999999986             


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        +||||+++|+|.+++...... ...+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+||+|||+
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~  180 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGS  180 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence              899999999999999864222 256999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCcee-------eccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHH
Q 038681          194 SLSIPDGETHI-------ELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       194 a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~  262 (332)
                      +..........       ......||+.|+|||++.+    .++.++|||||||++|+|++|..||.........     
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-----  255 (317)
T 2buj_A          181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-----  255 (317)
T ss_dssp             CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-----
T ss_pred             chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-----
Confidence            87654221100       0123457999999999875    3689999999999999999999998642111100     


Q ss_pred             HhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHH
Q 038681          263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMY  328 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~  328 (332)
                                .......    ..  ..+.....+..+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus       256 ----------~~~~~~~----~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          256 ----------VALAVQN----QL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             ----------HHHHHHC----C----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             ----------hhHHhhc----cC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence                      0000000    00  01111233478999999999999999999999999998875


No 186
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=2.2e-46  Score=337.86  Aligned_cols=258  Identities=20%  Similarity=0.293  Sum_probs=192.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++..... ....+.+.+|+.++++++||||+++           +||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            45799999999999999999999  689999999876543 3345668899999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++++|.+++...     ..+++..+..++.||+.||.|||   +.||+||||||+||+++.++.+||+|||+++...
T Consensus       104 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          104 EFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             ECCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             ecCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            999999998887654     56999999999999999999999   9999999999999999999999999999997665


Q ss_pred             CCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  ....||+.|+|||++.+  .++.++|||||||++|+|++|..||..........  ..........+.....
T Consensus       176 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~  251 (331)
T 4aaa_A          176 APGEVY--DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY--HIMMCLGNLIPRHQEL  251 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCSCCHHHHHH
T ss_pred             CCcccc--CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH--HHHHHhCCCChhhhhH
Confidence            433221  34578999999999876  68999999999999999999999998765543221  1111111111111111


Q ss_pred             hhhhhhcc-c-----CCCCC---ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIED-K-----SCTCT---GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~-~-----~~~~~---~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      +....... .     ....+   ..+..++.+.+|+.+||+.||.+|||+.|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11000000 0     00000   00134578999999999999999999999886


No 187
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=8.4e-47  Score=340.64  Aligned_cols=254  Identities=21%  Similarity=0.307  Sum_probs=185.3

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCCcceE-----
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKHIIKL-----  115 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~-----  115 (332)
                      +..+.++....+|.+.+.||+|+||.||+|.+  +++.||+|++..... ...+.+.+|+.++.++. ||||+++     
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE-EKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             STTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH-HHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             hhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch-HHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            33344455566899999999999999999999  889999999865543 33677899999999996 9999986     


Q ss_pred             --------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCee
Q 038681          116 --------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRP--IVYRDMKPTNIL  179 (332)
Q Consensus       116 --------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~Nil  179 (332)
                                    +||||++ |+|.+++.....  ...+++..++.++.||+.||.|||   +.+  |+||||||+|||
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl  170 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLL  170 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCE
T ss_pred             ccccccccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEE
Confidence                          7999996 699999976422  146999999999999999999999   888  999999999999


Q ss_pred             eCCCCCeEEeecCCccccCCCCcee----------eccccccCCCccccccc---CC-CCChhhhHHHHHHHHHHHHhCC
Q 038681          180 FNEQSDAKLFDFSLSLSIPDGETHI----------ELDSVVGTTGFIAPENF---TT-LINEQCDVYGFGAFLFELLTAQ  245 (332)
Q Consensus       180 l~~~~~~kl~Dfg~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~-~~~~~sDiwSlG~~l~elltg~  245 (332)
                      ++.++.+||+|||+++.........          ......||+.|+|||++   .+ .++.++|||||||++|+|++|.
T Consensus       171 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~  250 (337)
T 3ll6_A          171 LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ  250 (337)
T ss_dssp             ECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCC
Confidence            9999999999999998765432211          11245689999999998   34 7899999999999999999999


Q ss_pred             ccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 038681          246 EVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLR  325 (332)
Q Consensus       246 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~  325 (332)
                      .||.........                    ......      +.....+..+.+|+.+||+.||.+|||+.++++.|+
T Consensus       251 ~p~~~~~~~~~~--------------------~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          251 HPFEDGAKLRIV--------------------NGKYSI------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             CCC--------------------------------CCC------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             CCCcchhHHHhh--------------------cCcccC------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            999754322110                    000000      000112245789999999999999999999999999


Q ss_pred             HHHHh
Q 038681          326 QMYRS  330 (332)
Q Consensus       326 ~l~~~  330 (332)
                      .+...
T Consensus       305 ~~~~~  309 (337)
T 3ll6_A          305 EIAAA  309 (337)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88753


No 188
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=5.9e-46  Score=329.41  Aligned_cols=236  Identities=19%  Similarity=0.288  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....  .....+.+.+|+.+++.++||||+++           +|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            45799999999999999999999  68899999987653  33446778999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++++|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+||+++.++.+||+|||++...
T Consensus        94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            9999999999998775     57999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.........      .........    
T Consensus       166 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------~~~~~~~~~----  233 (294)
T 2rku_A          166 EYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY------LRIKKNEYS----  233 (294)
T ss_dssp             CSTTCC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHTTCCC----
T ss_pred             ccCccc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHhhccCC----
Confidence            543322  134578999999999987 7899999999999999999999999765433211      111100000    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .+...+..+.+|+.+||+.||++|||+.++++
T Consensus       234 --------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          234 --------------IPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             --------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --------------CccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                          11123367899999999999999999999986


No 189
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=4.1e-46  Score=327.29  Aligned_cols=235  Identities=26%  Similarity=0.368  Sum_probs=186.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....  .....+.+.+|+.+++.++||||+++           +|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            46799999999999999999998  68999999986542  12335678999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++++|.+++...     ..+++..+..++.||+.||.|||   +++|+|+||||+||+++.++.+||+|||++...
T Consensus        90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            9999999999999876     56999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ......   ....||+.|+|||++.+ . .+.++||||||+++|+|++|..||........      ...+......   
T Consensus       162 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~---  229 (276)
T 2h6d_A          162 SDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL------FKKIRGGVFY---  229 (276)
T ss_dssp             CC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCCC---
T ss_pred             CCCcce---ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------HHHhhcCccc---
Confidence            554322   34578999999999987 3 36899999999999999999999976543221      1111110000   


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                     .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       230 ---------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          230 ---------------IPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             ---------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                           01123367899999999999999999999987


No 190
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4e-46  Score=342.85  Aligned_cols=257  Identities=18%  Similarity=0.206  Sum_probs=192.0

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      ++...++|.+.+.||+|+||.||+|.+  +++.||||++......     ..+|+.+++.++||||+++           
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence            445678899999999999999999998  8899999998765332     2479999999999999974           


Q ss_pred             --------------------------------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHH
Q 038681          116 --------------------------------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAV  157 (332)
Q Consensus       116 --------------------------------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L  157 (332)
                                                            +||||++ |+|.+.+...... ...+++..+..++.||+.||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHH
Confidence                                                  6899998 5888888754322 25799999999999999999


Q ss_pred             HHhhhcCCCCeeecCCCCCCeeeC-CCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHH
Q 038681          158 AYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGF  234 (332)
Q Consensus       158 ~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSl  234 (332)
                      .|||   +.||+||||||+|||++ .++.+||+|||+++........   ....||+.|+|||++.+  .++.++|||||
T Consensus       155 ~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl  228 (383)
T 3eb0_A          155 GFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPSIDLWSI  228 (383)
T ss_dssp             HHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSSCCTHHHHHHH
T ss_pred             HHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCCCCcchhhhhH
Confidence            9999   99999999999999997 6889999999999876554432   45578999999999876  58999999999


Q ss_pred             HHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh--hhhhc-ccCC------CCCChHHHHHHHHHHHHH
Q 038681          235 GAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD--SIIIE-DKSC------TCTGKEQQLQAFKQLTLQ  305 (332)
Q Consensus       235 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~------~~~~~~~~~~~~~~li~~  305 (332)
                      ||++|||++|+.||......+...  .........  ....+..  +.... ..+.      ....+...+..+.+|+.+
T Consensus       229 G~il~ell~g~~pf~~~~~~~~~~--~i~~~~g~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  304 (383)
T 3eb0_A          229 GCVFGELILGKPLFSGETSIDQLV--RIIQIMGTP--TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQ  304 (383)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCC--CHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCC--CHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHH
Confidence            999999999999998765543321  111111111  0000000  00000 0000      000112345779999999


Q ss_pred             cccCCCCCCCCHHHHHH
Q 038681          306 CMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       306 cl~~dP~~RPs~~evl~  322 (332)
                      ||+.||.+|||+.|+++
T Consensus       305 ~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          305 ILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HCCSSGGGSCCHHHHHT
T ss_pred             HccCChhhCCCHHHHhc
Confidence            99999999999999985


No 191
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.3e-46  Score=329.36  Aligned_cols=237  Identities=19%  Similarity=0.326  Sum_probs=174.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+.....  ....+.+.+|+.++.+++||||+++           +|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46799999999999999999998  789999999865421  2225778999999999999999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++++|.+++....    ..+++..++.++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus        90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            99999999999997641    46899999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      .......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........      ..          
T Consensus       163 ~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~----------  224 (278)
T 3cok_A          163 KMPHEKH--YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KV----------  224 (278)
T ss_dssp             C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------C----------
T ss_pred             cCCCCcc--eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HH----------
Confidence            5433211  34578999999999987 78999999999999999999999997654322110      00          


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                          .....    ..+...+.++.+|+.+||+.||++|||++++++
T Consensus       225 ----~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          225 ----VLADY----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ----CSSCC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ----hhccc----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                00000    011123467899999999999999999999976


No 192
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2.5e-46  Score=357.35  Aligned_cols=242  Identities=20%  Similarity=0.318  Sum_probs=196.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------E
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------I  116 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------l  116 (332)
                      ..++|.+.+.||+|+||.||+|.+  +|+.||+|++....  .......+.+|+.++.+++|||||++           +
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            356799999999999999999999  79999999996542  12235668899999999999999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ||||+++|+|.+++....   ...+++..++.++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||+++.
T Consensus       262 VmEy~~gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~  335 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVH  335 (576)
T ss_dssp             EECCCCSCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEcCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence            999999999999997642   134999999999999999999999   89999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      .......   ....||+.|+|||++.+ .++.++|||||||++|||++|..||..........  .....+.....    
T Consensus       336 ~~~~~~~---~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~--~i~~~i~~~~~----  406 (576)
T 2acx_A          336 VPEGQTI---KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE--EVERLVKEVPE----  406 (576)
T ss_dssp             CCTTCCE---ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH--HHHHHHHHCCC----
T ss_pred             cccCccc---cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH--HHHHHhhcccc----
Confidence            7655432   34589999999999988 89999999999999999999999998654321110  01111111110    


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~  322 (332)
                                    ..+...+.++.+||.+||+.||.+||     +++||++
T Consensus       407 --------------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          407 --------------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             --------------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             --------------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                          11123447899999999999999999     7888875


No 193
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.6e-46  Score=362.47  Aligned_cols=252  Identities=21%  Similarity=0.332  Sum_probs=203.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------  115 (332)
                      ++....++|.+.+.||+|+||.||+|.+     .+..||+|.+.........+.+.+|+.++++++||||+++       
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~  463 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN  463 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            4445567788999999999999999998     2457999998877666667889999999999999999998       


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG  536 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFG  536 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecC
Confidence               8999999999999997641    35899999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++.......... ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||..........      .+..  
T Consensus       537 ~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~------~i~~--  607 (656)
T 2j0j_A          537 LSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG------RIEN--  607 (656)
T ss_dssp             CCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHHH--
T ss_pred             CCeecCCCcceec-cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH------HHHc--
Confidence            9987655432211 34457789999999876 89999999999999999997 999998654432211      1100  


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                  ..   ..+.+..++..+.+|+.+||+.||.+|||+.+|++.|+++.+.
T Consensus       608 ------------~~---~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          608 ------------GE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             ------------TC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------------CC---CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence                        00   0011123447899999999999999999999999999998754


No 194
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=3.8e-46  Score=335.05  Aligned_cols=239  Identities=20%  Similarity=0.279  Sum_probs=189.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-------hhhHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-------QHALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||.+.....       ......+.+|+.++++++||||+++        
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            45699999999999999999998  789999999875421       1223458899999999999999997        


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC---eEEee
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFD  190 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~D  190 (332)
                        +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.   +||+|
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence              899999999999999765     57999999999999999999999   999999999999999987664   99999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccC---C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhh
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFT---T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      ||+++........   ....||+.|+|||++.   . .++.++|||||||++|+|++|..||.........     ...+
T Consensus       161 fg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~  232 (322)
T 2ycf_A          161 FGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----KDQI  232 (322)
T ss_dssp             CTTCEECCCCHHH---HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH-----HHHH
T ss_pred             Cccceeccccccc---ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH-----HHHH
Confidence            9999876543221   3457899999999873   3 7899999999999999999999999765433221     1111


Q ss_pred             hccccc-hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          267 SGQNCR-FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       267 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...... ....               ....+..+.+|+.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          233 TSGKYNFIPEV---------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHTCCCCCHHH---------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhCccccCchh---------------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            100000 0000               0123478999999999999999999999985


No 195
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=5.2e-46  Score=336.08  Aligned_cols=236  Identities=19%  Similarity=0.289  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||++.+  +++.||+|.+....  .....+.+.+|+.+++.++||||+++           +|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            46799999999999999999999  68899999987543  33446788999999999999999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++++|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||++...
T Consensus       120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            9999999999998775     57999999999999999999999   899999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........      ........    
T Consensus       192 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~~~~~----  259 (335)
T 2owb_A          192 EYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------RIKKNEYS----  259 (335)
T ss_dssp             CSTTCC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHHTCCC----
T ss_pred             ccCccc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HHhcCCCC----
Confidence            543322  135679999999999987 78999999999999999999999997654332111      11000000    


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .+...+..+.+|+.+||+.||++|||+.++++
T Consensus       260 --------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          260 --------------IPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             --------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                          01123367899999999999999999999986


No 196
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.7e-45  Score=326.86  Aligned_cols=240  Identities=22%  Similarity=0.315  Sum_probs=196.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--------hhhHHHHHHHHHHHHhhc-CCCcceE-----
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--------QHALEWCINHIVYASRMS-HKHIIKL-----  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-H~nIv~~-----  115 (332)
                      ..++|.+.+.||+|+||.||+|.+  +++.||||.+.....        ....+.+.+|+.++.++. ||||+++     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            357899999999999999999999  789999999976531        123567889999999995 9999997     


Q ss_pred             ------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEe
Q 038681          116 ------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLF  189 (332)
Q Consensus       116 ------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~  189 (332)
                            +||||+++|+|.+++...     ..+++..+..++.||+.||.|||   ++||+|+||||+||+++.++.+||+
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEe
Confidence                  899999999999999875     57999999999999999999999   9999999999999999999999999


Q ss_pred             ecCCccccCCCCceeeccccccCCCcccccccC------C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHH
Q 038681          190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFT------T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       190 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~  262 (332)
                      |||++.........   ....||+.|+|||++.      . .++.++|||||||++|+|++|..||.........     
T Consensus       167 dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-----  238 (298)
T 1phk_A          167 DFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML-----  238 (298)
T ss_dssp             CCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-----
T ss_pred             cccchhhcCCCccc---ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH-----
Confidence            99999876554332   4567899999999874      2 6789999999999999999999999765432211     


Q ss_pred             HhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                       ..+..              .......+.....+..+.+|+.+||+.||.+|||+.++++
T Consensus       239 -~~~~~--------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          239 -RMIMS--------------GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             -HHHHH--------------TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -HHHhc--------------CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence             11100              0011111111234578999999999999999999999975


No 197
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=9.6e-46  Score=326.30  Aligned_cols=234  Identities=17%  Similarity=0.230  Sum_probs=189.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhh-cCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRM-SHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+.... .......+.+|+..+..+ +||||+++           +|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46699999999999999999999  79999999998653 233467789999999999 99999998           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC--------------
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--------------  183 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--------------  183 (332)
                      |||+++|+|.+++...... ...+++..++.++.||+.||.|||   +++|+||||||+||+++.+              
T Consensus        90 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred             EEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999999999875321 246899999999999999999999   9999999999999999844              


Q ss_pred             -----CCeEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccch
Q 038681          184 -----SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESR  256 (332)
Q Consensus       184 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~  256 (332)
                           ..+||+|||.+.......      ...||+.|+|||++.+  .++.++|||||||++|+|++|..|+......  
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--  237 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW--  237 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH--
T ss_pred             ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH--
Confidence                 479999999998765543      3458999999999976  5668999999999999999998876533211  


Q ss_pred             hhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          257 FHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            .........                  ..+...+..+.+|+.+||+.||++|||+.++++
T Consensus       238 ------~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          238 ------HEIRQGRLP------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             ------HHHHTTCCC------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------HHHHcCCCC------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence                  000000000                  011123478999999999999999999999985


No 198
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-46  Score=341.22  Aligned_cols=242  Identities=18%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-----CCeeEEEEEEcCCC---ChhhHHHHHHHHHHHHhh-cCCCcceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-----QKRSISLMKYNGNR---NQHALEWCINHIVYASRM-SHKHIIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+     +++.||||++....   .....+.+.+|+.++.++ .||||+++        
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36799999999999999999998     68899999987542   122245677899999999 69999987        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         |||||+++|+|.+++...     ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCC
Confidence               899999999999999876     56999999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      +++......... .....||+.|+|||++.+   .++.++|||||||++|||++|..||..........  .....    
T Consensus       205 ~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~----  277 (355)
T 1vzo_A          205 LSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA--EISRR----  277 (355)
T ss_dssp             EEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH--HHHHH----
T ss_pred             CCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH--HHHHH----
Confidence            998664433221 134679999999999975   57899999999999999999999997544322111  01111    


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-----TMVDVAKQ  323 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~  323 (332)
                                ......    +.+...+..+.+|+.+||+.||.+||     |+.++++.
T Consensus       278 ----------~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          278 ----------ILKSEP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             ----------HHHCCC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ----------HhccCC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence                      111111    11123347789999999999999999     99998763


No 199
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=2.4e-46  Score=331.15  Aligned_cols=249  Identities=22%  Similarity=0.372  Sum_probs=191.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEe---CC--eeEEEEEEcCCC--ChhhHHHHHHHHHHHHhhcCCCcceE----------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW---QK--RSISLMKYNGNR--NQHALEWCINHIVYASRMSHKHIIKL----------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~---~~--~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~----------  115 (332)
                      .++|++.+.||+|+||.||+|.+   ++  ..||+|.+....  .....+.+.+|+.++.+++||||+++          
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   96 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence            46799999999999999999986   22  368999987653  23446789999999999999999998          


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +|+||+++|+|.+++....    ..+++..+..++.||+.||.|||   +++|+|+||||+||+++.++.+||+|||++.
T Consensus        97 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence            8999999999999998652    45899999999999999999999   9999999999999999999999999999998


Q ss_pred             ccCCCCcee-eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          196 SIPDGETHI-ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       196 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ......... ......+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.........      ......   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~~~~~---  240 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL------HKIDKE---  240 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHTS---
T ss_pred             cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH------HHHHcc---
Confidence            776544322 1234467889999999876 78999999999999999999 99999765433211      111100   


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                                 ..  ..+.+...+..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       241 -----------~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          241 -----------GE--RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             -----------CC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             -----------CC--CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence                       00  0111123457899999999999999999999999999987643


No 200
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.2e-45  Score=332.64  Aligned_cols=249  Identities=16%  Similarity=0.221  Sum_probs=191.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCCcceE-------------E
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKHIIKL-------------I  116 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~-------------l  116 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++....    .+.+.+|+.++.+++ ||||+++             +
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            36699999999999999999998  88999999997543    467899999999997 9999987             8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC-CeEEeecCCcc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS-DAKLFDFSLSL  195 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~a~  195 (332)
                      ||||+++++|.+++.        .+++..+..++.||+.||.|||   +++|+||||||+|||++.++ .+||+|||+++
T Consensus       111 v~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          111 VFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             EEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence            999999999999884        3889999999999999999999   99999999999999999777 89999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ........   ....||+.|+|||++.+  .++.++|||||||++|+|++|..||......... ........  ....+
T Consensus       180 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~-l~~~~~~~--~~~~~  253 (330)
T 3nsz_A          180 FYHPGQEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVRIAKVL--GTEDL  253 (330)
T ss_dssp             ECCTTCCC---CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH-HHHHHHHH--CHHHH
T ss_pred             EcCCCCcc---ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH-HHHHHHhc--CCchh
Confidence            76554432   45578999999999876  6899999999999999999999999644322111 00000000  00001


Q ss_pred             hhhhh-----------hhhhccc------CCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          274 KEMVD-----------SIIIEDK------SCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       274 ~~~~~-----------~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .+.++           .......      ..........+.++.+|+.+||+.||.+|||++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          254 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            11100           0000000      0011111234578999999999999999999999986


No 201
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=6e-46  Score=345.58  Aligned_cols=253  Identities=21%  Similarity=0.277  Sum_probs=189.0

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE----------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL----------------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~----------------  115 (332)
                      .+|.+.+.||+|+||.||+|.+  +++.||||++.....     ...+|+.++++++|||||++                
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            3589999999999999999999  689999999876432     23479999999999999986                


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC-CCeEEeecCC
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ-SDAKLFDFSL  193 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfg~  193 (332)
                       +||||+++ +|.+++..... ....+++..++.++.||+.||.|||   +++|+||||||+|||++.+ +.+||+|||+
T Consensus       129 ~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             Eeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchh
Confidence             69999986 77777654322 1256999999999999999999999   9999999999999999965 5689999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc-
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN-  270 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-  270 (332)
                      ++........   ....||+.|+|||++.+  .++.++|||||||++|||++|+.||......+..  ......+.... 
T Consensus       204 a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l--~~i~~~lg~p~~  278 (420)
T 1j1b_A          204 AKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL--VEIIKVLGTPTR  278 (420)
T ss_dssp             CEECCTTCCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCSCCH
T ss_pred             hhhcccCCCc---eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCH
Confidence            9876544322   34678999999999875  6899999999999999999999999876543321  11111111100 


Q ss_pred             cchhhhhhhhhhc-ccCC-CC-----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIE-DKSC-TC-----TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~-~~~~-~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+..+ ++.... ..+. ..     ......+.++.+|+.+||+.||.+|||+.|+++
T Consensus       279 ~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          279 EQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            000000 000000 0000 00     001123478999999999999999999999985


No 202
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.2e-46  Score=342.53  Aligned_cols=253  Identities=17%  Similarity=0.231  Sum_probs=177.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.... .....+.+.+|+.+++.++||||+++              
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46799999999999999999998  79999999997643 34446788999999999999999975              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +|+|++ +++|.+++..      ..+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence               789998 6899998865      36999999999999999999999   9999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++......     ....||+.|+|||++.+  .++.++|||||||++|||++|+.||.+........  .....+....
T Consensus       178 ~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~--~i~~~~g~p~  250 (367)
T 2fst_X          178 LARHTADEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK--LILRLVGTPG  250 (367)
T ss_dssp             ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCSCC
T ss_pred             ccccccccC-----CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCC
Confidence            998754432     35679999999999876  78999999999999999999999998765433221  1111111111


Q ss_pred             cchh-hhh----hhhhhcccCCCCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFK-EMV----DSIIIEDKSCTCTGK----EQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~-~~~----~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .... .+.    ...+......+....    ...++.+.+|+.+||+.||.+|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            0000 000    000000000000000    123467899999999999999999999985


No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=9.6e-46  Score=362.34  Aligned_cols=238  Identities=18%  Similarity=0.241  Sum_probs=195.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC--ChhhHHHHHHHHHHHHhh-cCCCcceE----------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR--NQHALEWCINHIVYASRM-SHKHIIKL----------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~----------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||||++....  .....+.+..|..++..+ +||||+++          
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            3467899999999999999999999  78889999987542  122356788999999988 79999987          


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       |||||+++|+|.+++...     ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       418 ~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla  489 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC  489 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred             EEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeeccee
Confidence             899999999999999876     57999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      +........  .....||+.|+|||++.+ .++.++|||||||++|||++|..||......+.      ...+...... 
T Consensus       490 ~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~~~~-  560 (674)
T 3pfq_A          490 KENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------FQSIMEHNVA-  560 (674)
T ss_dssp             EECCCTTCC--BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHSSCCC-
T ss_pred             eccccCCcc--cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH------HHHHHhCCCC-
Confidence            864433222  246789999999999987 899999999999999999999999987654332      1111111111 


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM-----VDVAK  322 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~  322 (332)
                                       .+...+.++.+||.+||+.||.+||++     +||++
T Consensus       561 -----------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          561 -----------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             -----------------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             -----------------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                             112344789999999999999999997     66653


No 204
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.6e-45  Score=345.82  Aligned_cols=251  Identities=17%  Similarity=0.257  Sum_probs=198.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcc-eE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHII-KL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~~-----------lv~  118 (332)
                      .++|.+.++||+|+||.||+|.+  ++..||||++......   ..+.+|+.++..++|++++ .+           |||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            46799999999999999999998  7899999988765432   3478999999999875443 33           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee---CCCCCeEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF---NEQSDAKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~  195 (332)
                      ||+ +++|.+++....    ..+++..++.++.||+.||.|||   .++|+||||||+|||+   +.++.+||+|||+++
T Consensus        83 e~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             ECC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            999 899999997542    46999999999999999999999   9999999999999999   688999999999998


Q ss_pred             ccCCCCcee-----eccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          196 SIPDGETHI-----ELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       196 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      .........     ......||+.|+|||++.+ .++.++|||||||++|||++|..||.................    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----  230 (483)
T 3sv0_A          155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----  230 (483)
T ss_dssp             ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH----
T ss_pred             eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh----
Confidence            765543211     1135679999999999988 899999999999999999999999987654332211100000    


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                       ..+...+....           ..++.++.+|+..||+.||.+||++.+|++.|+.+...
T Consensus       231 -~~~~~~~~~l~-----------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          231 -KKVATSIEALC-----------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             -HHHHSCHHHHH-----------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -ccccccHHHHh-----------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence             00000000000           12237899999999999999999999999999998753


No 205
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=8.8e-46  Score=326.23  Aligned_cols=236  Identities=24%  Similarity=0.374  Sum_probs=195.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+....     +.+.+|+.++.+++||||+++               
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            45699999999999999999999  68999999997653     346789999999999999964               


Q ss_pred             ------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC
Q 038681          116 ------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ  183 (332)
Q Consensus       116 ------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~  183 (332)
                                  +||||+++|+|.+++.....   ..+++..++.++.||+.||.|||   +.+|+|+||||+||+++.+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCC
Confidence                        78999999999999976421   46899999999999999999999   8999999999999999999


Q ss_pred             CCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHH
Q 038681          184 SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       184 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~  262 (332)
                      +.+||+|||++.........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..|+.....        .
T Consensus       159 ~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~  227 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------F  227 (284)
T ss_dssp             TEEEECCCTTCEESSCCSCC---CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------H
T ss_pred             CCEEECcchhheeccccccc---cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------H
Confidence            99999999999877654322   34578999999999987 789999999999999999999988742110        0


Q ss_pred             HhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          263 VKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .....          ...      .    +...+..+.+|+.+||+.||.+|||+.++++.|..+.++
T Consensus       228 ~~~~~----------~~~------~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          228 FTDLR----------DGI------I----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHH----------TTC------C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHhh----------ccc------c----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            00000          000      0    012236788999999999999999999999999987643


No 206
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5e-46  Score=337.62  Aligned_cols=261  Identities=21%  Similarity=0.240  Sum_probs=189.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChh----hHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           50 RIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQH----ALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      ....++|.+.+.||+|+||.||+|.+  +++.||||++.......    ..+.+.+|+.++.+++||||+++        
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            34467899999999999999999999  68999999987543221    13467899999999999999998        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||+++ +|.+++....    ..+++..+..++.|++.||.|||   +++|+||||||+|||++.++.+||+|||
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFG  157 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred             ceEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecc
Confidence               89999986 8998887541    46889999999999999999999   9999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-c
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-Q  269 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~  269 (332)
                      +++........  .....||+.|+|||++.+  .++.++|||||||++|+|++|..||..........  ........ .
T Consensus       158 ~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~--~i~~~~~~~~  233 (346)
T 1ua2_A          158 LAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT--RIFETLGTPT  233 (346)
T ss_dssp             GGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCC
T ss_pred             cceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHHHcCCCC
Confidence            99876543322  145678999999999875  58999999999999999999999998765433211  11111111 0


Q ss_pred             ccchhhhhh--hhhhcccCCCCC---ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          270 NCRFKEMVD--SIIIEDKSCTCT---GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       270 ~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...+.+...  ...........+   .....+..+.+|+.+||+.||.+|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          234 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             TTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            111111000  000000000000   00133478999999999999999999999986


No 207
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=9.7e-46  Score=345.01  Aligned_cols=189  Identities=21%  Similarity=0.269  Sum_probs=163.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh------cCCCcceE---------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM------SHKHIIKL---------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~~---------  115 (332)
                      ..+|++.+.||+|+||.||+|.+  +++.||||++....  ...+.+.+|+.++..+      +|+||+++         
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            45699999999999999999998  68999999997642  3356778899998888      56799987         


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC--eEEeec
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD--AKLFDF  191 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Df  191 (332)
                        +||||+. |+|.+++.....   ..+++..++.++.||+.||+|||   +++|+||||||+|||++.++.  +||+||
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             EEEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence              8999996 699999987521   35899999999999999999999   899999999999999999887  999999


Q ss_pred             CCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccc
Q 038681          192 SLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFES  255 (332)
Q Consensus       192 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~  255 (332)
                      |++.......     ....||+.|+|||++.+ .++.++|||||||++|||++|..||......+
T Consensus       247 G~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~  306 (429)
T 3kvw_A          247 GSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD  306 (429)
T ss_dssp             TTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            9997654432     35678999999999987 89999999999999999999999998776543


No 208
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=7.9e-47  Score=335.98  Aligned_cols=257  Identities=20%  Similarity=0.325  Sum_probs=179.5

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------  115 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------  115 (332)
                      +....++|.+.+.||+|+||.||+|.+  +++.||||.+.........+.+.+|+.++.+++||||+++           
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            345568899999999999999999998  7899999998766544556778999999999999999997           


Q ss_pred             EEEEeccCCChHHHHhhhhcc---cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 IVFESVQIGTLADRIHHHCEQ---HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                      +||||+++|+|.+++......   ....+++..+..++.||+.||.|||   +.+|+||||||+||+++.++.+||+|||
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence            899999999999999753211   1246899999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCce---eeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          193 LSLSIPDGETH---IELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       193 ~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      ++.........   .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.........     .....
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~  241 (303)
T 2vwi_A          167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-----MLTLQ  241 (303)
T ss_dssp             HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-----HHHHT
T ss_pred             chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-----HHHhc
Confidence            98766443211   11134578999999999875  6899999999999999999999999876543321     11111


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...........         ........+..+.+|+.+||+.||.+|||+.++++
T Consensus       242 ~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          242 NDPPSLETGVQ---------DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             SSCCCTTC--------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCCCccccccc---------cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            11111110000         00001123467899999999999999999999986


No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.5e-45  Score=329.79  Aligned_cols=239  Identities=22%  Similarity=0.313  Sum_probs=190.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||+|.+.....   .+.+.+|+.++.+++||||+++           +|
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            3456799999999999999999999  689999999976543   4678899999999999999987           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||+++|+|.+++....    ..+++..+..++.||+.||.|||   +.+|+|+||||+||+++.++.+||+|||++...
T Consensus       103 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A          103 MEYCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             EECCTTEEHHHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            99999999999997431    46999999999999999999999   999999999999999999999999999999766


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........     ......       
T Consensus       176 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~-------  241 (314)
T 3com_A          176 TDTMAK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-----MIPTNP-------  241 (314)
T ss_dssp             BTTBSC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSC-------
T ss_pred             hhhccc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHhcCC-------
Confidence            543221  135578999999999987 88999999999999999999999997654322110     000000       


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                               ......+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       242 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          242 ---------PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             ---------CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---------CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                     0011112234478999999999999999999999986


No 210
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=7.1e-46  Score=337.18  Aligned_cols=258  Identities=19%  Similarity=0.230  Sum_probs=194.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++...........+.+|+.++++++||||+++               
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46799999999999999999999  6999999999876666667788999999999999999976               


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||++ |+|.+++..      ..+++..+..++.||+.||.|||   ++||+||||||+|||++.++.+||+|||++
T Consensus        90 ~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLA  159 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence             8999997 599999875      36999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCcee--------eccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHh
Q 038681          195 LSIPDGETHI--------ELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVK  264 (332)
Q Consensus       195 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~  264 (332)
                      ..........        ......||+.|+|||++.+  .++.++|||||||++|+|++|..||...........  ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~  237 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL--IFG  237 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHH
T ss_pred             cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH--HHH
Confidence            8765432111        1123578999999998753  789999999999999999999999987654332210  111


Q ss_pred             hhhccc--cchhhh----hhhhhhcccCCCCC----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          265 RLSGQN--CRFKEM----VDSIIIEDKSCTCT----GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       265 ~~~~~~--~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ......  ......    ..............    .....+..+.+|+.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            110000  000000    00000000000000    00134578899999999999999999999986


No 211
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.7e-45  Score=334.67  Aligned_cols=260  Identities=17%  Similarity=0.210  Sum_probs=194.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++..... ......+.+|+.+++.++||||+++              
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46799999999999999999999  789999999866543 2234567899999999999999976              


Q ss_pred             -----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 -----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 -----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                           +||||+++ +|.+.+....    ..+++..++.++.||+.||.|||   ++||+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D  167 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD  167 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             CceEEEEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence                 79999985 7877776542    46999999999999999999999   99999999999999999999999999


Q ss_pred             cCCccccCCCCc--eeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhh
Q 038681          191 FSLSLSIPDGET--HIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRL  266 (332)
Q Consensus       191 fg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  266 (332)
                      ||+++.......  ........||+.|+|||++.+  .++.++|||||||++|+|++|..||...........  .....
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--i~~~~  245 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL--ISQLC  245 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHH
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHh
Confidence            999987653221  111245578999999999876  689999999999999999999999987655433221  11111


Q ss_pred             hccccc-hhhhhhhhhhccc----CCCCCChH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          267 SGQNCR-FKEMVDSIIIEDK----SCTCTGKE-----QQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       267 ~~~~~~-~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...... +............    ........     ..++.+.+|+.+||+.||++|||++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            111111 1111100000000    00000000     11356899999999999999999999986


No 212
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.5e-45  Score=350.95  Aligned_cols=244  Identities=19%  Similarity=0.294  Sum_probs=195.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      .++|.+.+.||+|+||.||+|++  +|+.||+|++.....  ....+.+.+|+.++.+++||||+++           +|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            36788899999999999999999  789999999975421  2235678999999999999999987           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      |||++||+|.+++..... ....+++..++.++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||+++..
T Consensus       264 mE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             ECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence            999999999999976421 1246999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          198 PDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       198 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|||++|..||..........  ......          
T Consensus       340 ~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~--~~~~~i----------  405 (543)
T 3c4z_A          340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK--ELKQRV----------  405 (543)
T ss_dssp             CTTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHH--HHHHHH----------
T ss_pred             cCCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHH--HHHHHH----------
Confidence            554332  134589999999999988 89999999999999999999999998654321100  011111          


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTM-----VDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~  322 (332)
                          .....    ..+...+..+.+|+.+||+.||.+||++     ++|++
T Consensus       406 ----~~~~~----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          406 ----LEQAV----TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             ----HHCCC----CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             ----hhccc----CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence                11111    1112344789999999999999999975     56653


No 213
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.3e-46  Score=335.74  Aligned_cols=252  Identities=17%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             CCcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE
Q 038681           39 NPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL  115 (332)
Q Consensus        39 ~~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~  115 (332)
                      .+...++..++....++|.+.+.||+|+||.||+|.+  +++.||+|.+......  .+.+.+|+.++.++ +||||+++
T Consensus         9 ~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~   86 (326)
T 2x7f_A            9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATY   86 (326)
T ss_dssp             -------CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCE
T ss_pred             CcchhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeee
Confidence            3444556666666788999999999999999999999  8899999999765433  46788999999999 79999986


Q ss_pred             -----------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 038681          116 -----------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNI  178 (332)
Q Consensus       116 -----------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni  178 (332)
                                       +||||+++|+|.+++.....   ..+++..++.++.||+.||.|||   +.||+|+||||+||
T Consensus        87 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NI  160 (326)
T 2x7f_A           87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNV  160 (326)
T ss_dssp             EEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGE
T ss_pred             eeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHE
Confidence                             79999999999999986421   46899999999999999999999   89999999999999


Q ss_pred             eeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccC-----C-CCChhhhHHHHHHHHHHHHhCCccCCCCC
Q 038681          179 LFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-----T-LINEQCDVYGFGAFLFELLTAQEVSDHVS  252 (332)
Q Consensus       179 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~  252 (332)
                      +++.++.+||+|||++.........  .....||+.|+|||++.     + .++.++|||||||++|+|++|..||....
T Consensus       161 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  238 (326)
T 2x7f_A          161 LLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  238 (326)
T ss_dssp             EECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             EEcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence            9999999999999999766443221  13457899999999986     3 68899999999999999999999997654


Q ss_pred             ccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          253 FESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ......     ........                 .......+..+.+|+.+||..||.+|||+.++++
T Consensus       239 ~~~~~~-----~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          239 PMRALF-----LIPRNPAP-----------------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHH-----HHHHSCCC-----------------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHH-----HhhcCccc-----------------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            322111     00000000                 0001123478999999999999999999999987


No 214
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=4.9e-45  Score=323.30  Aligned_cols=240  Identities=18%  Similarity=0.243  Sum_probs=188.5

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEEEe
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVFES  120 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e~  120 (332)
                      ++|.....||+|+||.||+|.+  ++..||+|.+...... ..+.+.+|+.+++.++||||+++           +||||
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-YSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchH-HHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            3455566999999999999998  7889999999776433 36778999999999999999997           89999


Q ss_pred             ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC-CCCeEEeecCCccccCC
Q 038681          121 VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE-QSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       121 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~  199 (332)
                      +++|+|.+++.....  ...+++..+..++.||+.||.|||   +.+|+|+||||+||+++. ++.+||+|||++.....
T Consensus       101 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          101 VPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             CSEEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred             CCCCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence            999999999976521  135678999999999999999999   899999999999999987 89999999999987654


Q ss_pred             CCceeeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEM  276 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (332)
                      ....  .....||+.|+|||++.+   .++.++|||||||++|+|++|..||...........   .......       
T Consensus       176 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~-------  243 (295)
T 2clq_A          176 INPC--TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKV-------  243 (295)
T ss_dssp             -------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCC-------
T ss_pred             CCCc--ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhccccc-------
Confidence            3221  134578999999999865   389999999999999999999999975432211100   0000000       


Q ss_pred             hhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ....+...+..+.+|+.+||+.||++|||+.++++
T Consensus       244 -----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 -----------HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             -----------CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             -----------cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                       00111234478999999999999999999999975


No 215
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=6.4e-45  Score=324.22  Aligned_cols=239  Identities=15%  Similarity=0.206  Sum_probs=193.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC---hhhHHHHHHHHHHHHhhcCCCcceE------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN---QHALEWCINHIVYASRMSHKHIIKL------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  ++..||+|.+.....   ....+.+.+|+.++++++||||+++            
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            47899999999999999999999  788999999976421   2336779999999999999999987            


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                       +||||+++| |.+++....   ...+++..+..++.||+.||.|||   +++|+||||||+||+++.++.+||+|||++
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~  156 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA  156 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEehhccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccc
Confidence             899999876 777776542   146999999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      ................||+.|+|||++.+   .++.++|||||||++|+|++|..||........      ...+..   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~i~~---  227 (305)
T 2wtk_C          157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL------FENIGK---  227 (305)
T ss_dssp             EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHH---
T ss_pred             cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH------HHHHhc---
Confidence            87654333222245679999999999876   347899999999999999999999986543221      111110   


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ....    .+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       228 -----------~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          228 -----------GSYA----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             -----------CCCC----CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----------CCCC----CCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                       0000    11123467899999999999999999999986


No 216
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.7e-45  Score=325.49  Aligned_cols=242  Identities=17%  Similarity=0.242  Sum_probs=179.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHH-HHHHHHHHHhhcCCCcceE-----------EE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEW-CINHIVYASRMSHKHIIKL-----------IV  117 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~H~nIv~~-----------lv  117 (332)
                      ..++|++.+.||+|+||.||+|.+  +++.||+|++........... +.++...++.++||||+++           +|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            457799999999999999999999  899999999987654433334 4445555777899999997           89


Q ss_pred             EEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          118 FESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       118 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      |||++ |+|.+++...... ...+++..++.++.||+.||.|||   ++ ||+||||||+||+++.++.+||+|||++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY  159 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred             Eehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence            99997 5898888764222 257999999999999999999999   87 999999999999999999999999999987


Q ss_pred             cCCCCceeeccccccCCCccccccc----CC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc
Q 038681          197 IPDGETHIELDSVVGTTGFIAPENF----TT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC  271 (332)
Q Consensus       197 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  271 (332)
                      .......   ....||+.|+|||++    .+ .++.++|||||||++|+|++|..||.........    ..........
T Consensus       160 ~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~  232 (290)
T 3fme_A          160 LVDDVAK---DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----LKQVVEEPSP  232 (290)
T ss_dssp             -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH----HHHHHHSCCC
T ss_pred             ccccccc---cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH----HHHHhccCCC
Confidence            6554322   345799999999996    33 7899999999999999999999999754322110    1111111000


Q ss_pred             chhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          272 RFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                       .......+..+.+|+.+||+.||++|||+.++++
T Consensus       233 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          233 -----------------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             -----------------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -----------------CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence                             0011133477999999999999999999999987


No 217
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.3e-45  Score=326.26  Aligned_cols=239  Identities=23%  Similarity=0.336  Sum_probs=195.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++.... .....+.+.+|+.++++++||||+++           +|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            46799999999999999999999  78999999986543 23346789999999999999999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC---CCeEEeecCCcc
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ---SDAKLFDFSLSL  195 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~  195 (332)
                      ||+++++|.+++...     ..+++..++.++.||+.||.|||   +.+|+|+||||+||+++.+   +.+||+|||++.
T Consensus       101 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A          101 ELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            999999999999765     56999999999999999999999   8999999999999999754   469999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhh
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKE  275 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (332)
                      ........   ....||+.|+|||++.+.++.++||||||+++|+|++|..||.........      ..+..       
T Consensus       173 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------~~~~~-------  236 (287)
T 2wei_A          173 CFQQNTKM---KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------KRVET-------  236 (287)
T ss_dssp             TBCCCSSC---SCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHH-------
T ss_pred             eecCCCcc---ccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH------HHHHc-------
Confidence            76544322   345689999999999888999999999999999999999999865433211      11110       


Q ss_pred             hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          276 MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                             .......+.....+..+.+|+.+||+.||.+|||+.++++
T Consensus       237 -------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          237 -------GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             -------CCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence                   0000011111133478999999999999999999999987


No 218
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=5.4e-46  Score=339.29  Aligned_cols=266  Identities=16%  Similarity=0.223  Sum_probs=194.0

Q ss_pred             ccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCC----------hhhHHHHHHHHHHHHhhcCCCc
Q 038681           44 FSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRN----------QHALEWCINHIVYASRMSHKHI  112 (332)
Q Consensus        44 ~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~----------~~~~~~~~~E~~~l~~l~H~nI  112 (332)
                      ....++....++|.+.+.||+|+||.||+|.+ .+..||||++.....          ....+.+.+|+.++++++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            34667888899999999999999999999998 889999999865422          2224789999999999999999


Q ss_pred             ceE----------------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 038681          113 IKL----------------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPT  176 (332)
Q Consensus       113 v~~----------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~  176 (332)
                      +++                +||||++ |+|.+++...    ...+++..+..++.||+.||.|||   +++|+||||||+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~  163 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPG  163 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChH
Confidence            975                8999998 5888888754    146999999999999999999999   899999999999


Q ss_pred             CeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCcc
Q 038681          177 NILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFE  254 (332)
Q Consensus       177 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~  254 (332)
                      |||++.++.+||+|||+++........   ....||+.|+|||++.+  .++.++|||||||++|+|++|..||......
T Consensus       164 NIl~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  240 (362)
T 3pg1_A          164 NILLADNNDITICDFNLAREDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY  240 (362)
T ss_dssp             GEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HEEEcCCCCEEEEecCccccccccccc---ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999755443322   44578999999999875  7899999999999999999999999876543


Q ss_pred             chhhhHHHHhhhhccc---------cchhhhhhhhhhcccCC-CCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          255 SRFHYEENVKRLSGQN---------CRFKEMVDSIIIEDKSC-TCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       255 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ....  ..........         ....+.+.......... ........++.+.+|+.+||+.||.+|||+.|+++
T Consensus       241 ~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          241 NQLN--KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHH--HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHH--HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            3221  1111111000         00000000000000000 00001123467999999999999999999999986


No 219
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=5.4e-46  Score=330.71  Aligned_cols=240  Identities=21%  Similarity=0.268  Sum_probs=189.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ..++|++.+.||+|+||.||+|.+  ++..||+|.+...... ..+.+.+|+.++..++||||+++           +||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            346799999999999999999999  6889999998765433 36789999999999999999997           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++|+|.+++....    ..+++..+..++.||+.||.|||   +.||+||||||+||+++.++.+||+|||++....
T Consensus        96 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             ECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred             EeCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence            9999999999987642    46999999999999999999999   8999999999999999999999999999875432


Q ss_pred             CCCceeeccccccCCCcccccccC-----C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          199 DGETHIELDSVVGTTGFIAPENFT-----T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ....  ......||+.|+|||++.     + .++.++|||||||++|+|++|..||........     .........  
T Consensus       169 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~--  239 (302)
T 2j7t_A          169 KTLQ--KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKSDP--  239 (302)
T ss_dssp             HHHH--C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHHHHHSCC--
T ss_pred             cccc--ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----HHHHhccCC--
Confidence            1111  113457899999999883     3 789999999999999999999999986543221     111111100  


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                    .....+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       240 --------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          240 --------------PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             --------------CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             --------------cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                          011112234578999999999999999999999975


No 220
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=9.5e-46  Score=333.27  Aligned_cols=241  Identities=21%  Similarity=0.252  Sum_probs=190.6

Q ss_pred             hcCCCCC-CccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhh-cCCCcceE-----------E
Q 038681           53 TNNYDEQ-NIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRM-SHKHIIKL-----------I  116 (332)
Q Consensus        53 ~~~y~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~~-----------l  116 (332)
                      .+.|.+. +.||+|+||.||+|.+  +++.||+|++..... ......+.+|+.++..+ .||||+++           +
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l  106 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL  106 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence            4557776 8899999999999999  689999999876532 33367789999999999 56999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEEeecCC
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFDFSL  193 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg~  193 (332)
                      ||||+++|+|.+++....   ...+++..++.++.||+.||+|||   +.||+||||||+|||++.   ++.+||+|||+
T Consensus       107 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          107 ILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             EEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             EEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            999999999999986431   146999999999999999999999   999999999999999987   78999999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      ++........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........   .....      
T Consensus       181 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~~~------  248 (327)
T 3lm5_A          181 SRKIGHACEL---REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL---NISQV------  248 (327)
T ss_dssp             CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHT------
T ss_pred             ccccCCcccc---ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH---HHHhc------
Confidence            9876544322   34679999999999987 89999999999999999999999997755433211   00000      


Q ss_pred             hhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          273 FKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ............+..+.+|+.+||+.||.+|||++++++
T Consensus       249 -----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          249 -----------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             -----------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence                       000011111234477999999999999999999999975


No 221
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=3.4e-45  Score=337.55  Aligned_cols=256  Identities=18%  Similarity=0.231  Sum_probs=193.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc--------CCCcceE-------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS--------HKHIIKL-------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~~-------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++...  ....+.+.+|+.+++.++        ||||+++       
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            47799999999999999999998  7899999999754  334677899999999996        7789886       


Q ss_pred             --------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCCC--
Q 038681          116 --------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQS--  184 (332)
Q Consensus       116 --------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~--  184 (332)
                              +||||+ +|+|.+++....   ...+++..++.++.||+.||.|||   ++ ||+||||||+|||++.++  
T Consensus       114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~  186 (397)
T 1wak_A          114 GVNGTHICMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQY  186 (397)
T ss_dssp             ETTEEEEEEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHH
T ss_pred             CCCCceEEEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchh
Confidence                    899999 567777766541   146999999999999999999999   87 999999999999998775  


Q ss_pred             -----------------------------------------------CeEEeecCCccccCCCCceeeccccccCCCccc
Q 038681          185 -----------------------------------------------DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIA  217 (332)
Q Consensus       185 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~a  217 (332)
                                                                     .+||+|||++.......     ....||+.|+|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~a  261 (397)
T 1wak_A          187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCGGGCC
T ss_pred             hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCCcccC
Confidence                                                           79999999998765432     34578999999


Q ss_pred             ccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhh----hHHHHhhhhccccchh-------hhhhhhh--hc
Q 038681          218 PENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFH----YEENVKRLSGQNCRFK-------EMVDSII--IE  283 (332)
Q Consensus       218 PE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~--~~  283 (332)
                      ||++.+ .++.++|||||||++|||++|..||..........    ...........+..+.       ..+....  ..
T Consensus       262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1wak_A          262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH  341 (397)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred             ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence            999987 79999999999999999999999997655332111    1111111111000000       0000000  00


Q ss_pred             c-----------cCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          284 D-----------KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       284 ~-----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .           ...........+..+.+|+.+||+.||++|||+.|+++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            0           00011223567788999999999999999999999985


No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.2e-45  Score=339.08  Aligned_cols=254  Identities=18%  Similarity=0.232  Sum_probs=188.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-----------------
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-----------------  115 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-----------------  115 (332)
                      .+|.+.+.||+|+||.||+|.+ .+..||+|++......     ..+|+.+++.++||||+++                 
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            4699999999999999999999 6667999988765322     2379999999999999986                 


Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC-CCCCeEEeecCCc
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQSDAKLFDFSLS  194 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfg~a  194 (332)
                      +||||++++ +.+.+..... ....+++..++.++.||+.||+|||   ++||+||||||+|||++ .++.+||+|||++
T Consensus       115 lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          115 LVLEYVPET-VYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEECCSEE-HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEeeccCcc-HHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            799999874 4444433211 1256999999999999999999999   99999999999999998 7899999999999


Q ss_pred             cccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccc
Q 038681          195 LSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCR  272 (332)
Q Consensus       195 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  272 (332)
                      +........   ....||+.|+|||++.+  .++.++|||||||++|||++|+.||.+........  .....+......
T Consensus       190 ~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~--~i~~~~g~p~~~  264 (394)
T 4e7w_A          190 KILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV--EIIKVLGTPSRE  264 (394)
T ss_dssp             EECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCHH
T ss_pred             ccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCHH
Confidence            876554432   35678999999999876  68999999999999999999999998765443321  111111111000


Q ss_pred             -hhhhhhhhhhcccCC--CC----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          273 -FKEMVDSIIIEDKSC--TC----TGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       273 -~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                       +..+.........+.  ..    ......++++.+|+.+||+.||.+|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence             000000000000000  00    011124578999999999999999999999985


No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.1e-44  Score=331.81  Aligned_cols=252  Identities=17%  Similarity=0.249  Sum_probs=190.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.... .....+.+.+|+.+++.++||||+++              
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46799999999999999999998  79999999998653 34446778999999999999999975              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||++ |+|.+++..       .+++..+..++.||+.||.|||   +.||+||||||+|||++.++.+||+|||
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence               8999997 589888743       4999999999999999999999   8999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++......     ....||+.|+|||++.+  .++.++|||||||++|+|++|..||......+...  ..........
T Consensus       190 ~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~  262 (371)
T 4exu_A          190 LARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPG  262 (371)
T ss_dssp             CC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCC
T ss_pred             cccccccCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHhCCCc
Confidence            997654432     35678999999999876  78999999999999999999999998765433221  1111111111


Q ss_pred             cchhhhh-----hhhhhcccCCCCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMV-----DSIIIEDKSCTCTG----KEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+...+     ..............    ....++.+.+|+.+||+.||++|||+.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            1110000     00000000000000    0123578999999999999999999999985


No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=6.6e-45  Score=331.63  Aligned_cols=267  Identities=17%  Similarity=0.206  Sum_probs=187.6

Q ss_pred             HHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE--------
Q 038681           46 AEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL--------  115 (332)
Q Consensus        46 ~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~--------  115 (332)
                      ..+.....++|.+.+.||+|+||.||+|.+  ++..||||++......  .....+|+..+..++||||+++        
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            345667788999999999999999999998  6899999998654322  3456788888999999999986        


Q ss_pred             ----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC-CC
Q 038681          116 ----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE-QS  184 (332)
Q Consensus       116 ----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~  184 (332)
                                +||||+++ +|.+.+...... ...+++..+..++.|++.||.|||.. +++|+||||||+|||++. ++
T Consensus        93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~  169 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRR-QVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADG  169 (360)
T ss_dssp             SSCTTCEEEEEEEECCSC-BHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTT
T ss_pred             cccccceeEEEEeecccc-cHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCC
Confidence                      69999986 666555432211 25689999999999999999999943 689999999999999996 89


Q ss_pred             CeEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHH
Q 038681          185 DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEEN  262 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~  262 (332)
                      .+||+|||+++........   ....||+.|+|||++.+  .++.++|||||||++|+|++|..||..........  ..
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~--~~  244 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH--EI  244 (360)
T ss_dssp             EEEECCCTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HH
T ss_pred             cEEEeeCCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH--HH
Confidence            9999999999877654432   35578999999999865  58999999999999999999999998765443321  11


Q ss_pred             Hhhhhccccchhhhhhhhhh-----cccCC-----CCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          263 VKRLSGQNCRFKEMVDSIII-----EDKSC-----TCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..............+++...     .....     ........+.++.+|+.+||+.||.+|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            11111111111100000000     00000     00011124678999999999999999999999985


No 225
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=4.6e-45  Score=324.24  Aligned_cols=257  Identities=19%  Similarity=0.240  Sum_probs=191.7

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE-----------EEEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL-----------IVFE  119 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~e  119 (332)
                      ++|++.+.||+|+||.||+|.+  +++.||+|++..... ....+.+.+|+.++++++||||+++           +|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            5799999999999999999999  789999999876532 2234678899999999999999997           8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCC
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPD  199 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  199 (332)
                      |++ |+|.+++.....   ..+++..+..++.||+.||.|||   ++||+||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~-~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            998 599999976521   35899999999999999999999   89999999999999999999999999999977654


Q ss_pred             CCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcccc-chhhh
Q 038681          200 GETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNC-RFKEM  276 (332)
Q Consensus       200 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  276 (332)
                      ....  .....+|+.|+|||++.+  .++.++|||||||++|+|++|..||......+...  ........... .+...
T Consensus       156 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~  231 (299)
T 2r3i_A          156 PVRT--YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF--RIFRTLGTPDEVVWPGV  231 (299)
T ss_dssp             CSBC--TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTG
T ss_pred             Cccc--cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHHHhCCCchhhhhHh
Confidence            3221  134578999999999876  47999999999999999999999998765433211  11111111000 00000


Q ss_pred             hhhhhhcccCCCC---C----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          277 VDSIIIEDKSCTC---T----GKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       277 ~~~~~~~~~~~~~---~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .. ........+.   .    .....+.++.+|+.+||+.||++|||+.++++
T Consensus       232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          232 TS-MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             GG-STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hc-CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00 0000000000   0    00123478899999999999999999999986


No 226
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=6.1e-45  Score=337.38  Aligned_cols=261  Identities=18%  Similarity=0.235  Sum_probs=175.3

Q ss_pred             CCCC-CCccccCCCceEEEEEe----CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE-------------E
Q 038681           55 NYDE-QNIVLEDPFRKLYKGFW----QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL-------------I  116 (332)
Q Consensus        55 ~y~~-~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~-------------l  116 (332)
                      .|.+ .++||+|+||.||+|.+    ++..||+|++.....   ...+.+|+.++++++||||+++             +
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            3665 56899999999999996    478899999976543   3467899999999999999986             8


Q ss_pred             EEEeccCCChHHHHhhhhcc----cccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee----CCCCCeEE
Q 038681          117 VFESVQIGTLADRIHHHCEQ----HFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF----NEQSDAKL  188 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl  188 (332)
                      ||||++ |+|.+++......    ....+++..++.++.||+.||.|||   +.+|+||||||+|||+    +.++.+||
T Consensus        98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            999997 4898888754211    1124999999999999999999999   9999999999999999    67889999


Q ss_pred             eecCCccccCCCCc-eeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccch-------hh
Q 038681          189 FDFSLSLSIPDGET-HIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESR-------FH  258 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~-------~~  258 (332)
                      +|||+++....... ........||+.|+|||++.+  .++.++|||||||++|||++|..||........       ..
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            99999987654321 112245679999999999886  589999999999999999999999976543210       11


Q ss_pred             hHHHHhhhhcc-ccchhhhh---h-----hhhhcccCCCCCCh-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          259 YEENVKRLSGQ-NCRFKEMV---D-----SIIIEDKSCTCTGK-------EQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       259 ~~~~~~~~~~~-~~~~~~~~---~-----~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .......+... ...+....   .     ..............       ...+..+.+||.+||+.||.+|||++|+++
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            11111111110 00011000   0     00000000000000       011357889999999999999999999986


No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=3e-44  Score=324.03  Aligned_cols=253  Identities=21%  Similarity=0.280  Sum_probs=194.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe---CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCC------cceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW---QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKH------IIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+   +++.||+|++...  ....+.+.+|+.++..++|+|      |+++        
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            35799999999999999999987   6889999999754  233577899999999997765      7765        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC----------
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE----------  182 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~----------  182 (332)
                         +||||+ +++|.+++....   ...+++..+..++.||+.||+|||   +++|+||||||+|||++.          
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~  163 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK  163 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred             cEEEEEcCC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence               899999 789999997652   136899999999999999999999   999999999999999987          


Q ss_pred             ---------CCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCC
Q 038681          183 ---------QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVS  252 (332)
Q Consensus       183 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~  252 (332)
                               ++.+||+|||+++......     ....||+.|+|||++.+ .++.++|||||||++|||++|..||....
T Consensus       164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  238 (339)
T 1z57_A          164 IKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD  238 (339)
T ss_dssp             --CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred             cccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence                     6789999999998754432     34578999999999988 89999999999999999999999998765


Q ss_pred             ccchhhhHHHHhhhhccccchhh-----------------------hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccC
Q 038681          253 FESRFHYEENVKRLSGQNCRFKE-----------------------MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDF  309 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  309 (332)
                      .......  ........+..+..                       ...... .............++.+.+|+.+||+.
T Consensus       239 ~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~L~~  315 (339)
T 1z57_A          239 SKEHLAM--MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC-KPLKEFMLSQDVEHERLFDLIQKMLEY  315 (339)
T ss_dssp             HHHHHHH--HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC-CCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred             hHHHHHH--HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC-cchhhhcccchhhHHHHHHHHHHHhCc
Confidence            4432211  11111111100000                       000000 000001112235678899999999999


Q ss_pred             CCCCCCCHHHHHH
Q 038681          310 SPEDRPTMVDVAK  322 (332)
Q Consensus       310 dP~~RPs~~evl~  322 (332)
                      ||.+|||+.|+++
T Consensus       316 dP~~Rpt~~ell~  328 (339)
T 1z57_A          316 DPAKRITLREALK  328 (339)
T ss_dssp             STTTSCCHHHHTT
T ss_pred             CcccccCHHHHhc
Confidence            9999999999985


No 228
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=329.71  Aligned_cols=252  Identities=17%  Similarity=0.245  Sum_probs=190.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.... .....+.+.+|+.+++.++||||+++              
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            36799999999999999999998  79999999997654 33446778999999999999999975              


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecC
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFS  192 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  192 (332)
                         +||||++ |+|.+++..       .+++..+..++.||+.||.|||   ++||+||||||+||+++.++.+||+|||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecc
Confidence               8999997 588888743       4899999999999999999999   9999999999999999999999999999


Q ss_pred             CccccCCCCceeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          193 LSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       193 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      +++......     ....||+.|+|||++.+  .++.++|||||||++|+|++|..||..........  ..........
T Consensus       172 ~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~  244 (353)
T 3coi_A          172 LARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPG  244 (353)
T ss_dssp             CTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH--HHHHHHCBCC
T ss_pred             cccCCCCCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCC
Confidence            997654332     34578999999999876  78999999999999999999999998765433211  1111111111


Q ss_pred             cchhh---------hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKE---------MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..+..         .+..................+..+.+|+.+||+.||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11100         00000000000000111244578999999999999999999999985


No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=3.7e-45  Score=327.53  Aligned_cols=257  Identities=18%  Similarity=0.210  Sum_probs=186.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|++.... ....+.+.+|+.++++++||||+++               
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            36799999999999999999999  58999999987654 3447789999999999999999986               


Q ss_pred             ----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC-CCC
Q 038681          116 ----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQS  184 (332)
Q Consensus       116 ----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~  184 (332)
                                +||||++ |+|.+++..      ..+++..++.++.||+.||+|||   ++||+||||||+||+++ .++
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~  158 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDL  158 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTT
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCC
Confidence                      7999998 699999864      36899999999999999999999   99999999999999997 567


Q ss_pred             CeEEeecCCccccCCCCce-eeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHH
Q 038681          185 DAKLFDFSLSLSIPDGETH-IELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEE  261 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~  261 (332)
                      .+||+|||+++........ .......+|..|+|||++.+  .++.++|||||||++|||++|+.||..........  .
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~  236 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ--L  236 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--H
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--H
Confidence            8999999999876432211 11134567999999998754  78999999999999999999999998765433211  0


Q ss_pred             HHhhhhccc-cchhh-------hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          262 NVKRLSGQN-CRFKE-------MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       262 ~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ......... ....+       ....................+.++.+|+.+||+.||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            111000000 00000       00000000000000000134578999999999999999999999986


No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.6e-45  Score=328.24  Aligned_cols=252  Identities=18%  Similarity=0.277  Sum_probs=190.0

Q ss_pred             CcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCC-ChhhHHHHHHHHHHHHhhc--CCCcceE
Q 038681           40 PYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNR-NQHALEWCINHIVYASRMS--HKHIIKL  115 (332)
Q Consensus        40 ~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--H~nIv~~  115 (332)
                      +...+..+.+....++|.+.+.||+|+||.||+|.+ +++.||+|++.... .....+.+.+|+.++.+++  ||||+++
T Consensus        14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   93 (313)
T 3cek_A           14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   93 (313)
T ss_dssp             ------CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred             CCCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence            344455555666678899999999999999999999 78899999997653 3445678999999999997  5999987


Q ss_pred             -----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCC
Q 038681          116 -----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQS  184 (332)
Q Consensus       116 -----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~  184 (332)
                                 +||| +.+|+|.+++...     ..+++..++.++.||+.||.|||   +.+|+||||||+|||+++ +
T Consensus        94 ~~~~~~~~~~~lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~  163 (313)
T 3cek_A           94 YDYEITDQYIYMVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-G  163 (313)
T ss_dssp             EEEEECSSEEEEEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-T
T ss_pred             EEEeecCCEEEEEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-C
Confidence                       8999 5678999999875     57899999999999999999999   899999999999999964 8


Q ss_pred             CeEEeecCCccccCCCCceeeccccccCCCcccccccCC------------CCChhhhHHHHHHHHHHHHhCCccCCCCC
Q 038681          185 DAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT------------LINEQCDVYGFGAFLFELLTAQEVSDHVS  252 (332)
Q Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~sDiwSlG~~l~elltg~~p~~~~~  252 (332)
                      .+||+|||++................||+.|+|||++.+            .++.++|||||||++|+|++|..||....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            899999999987655433222245578999999999864            68889999999999999999999997543


Q ss_pred             ccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          253 FESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .....    ...           ..+....      ...+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       244 ~~~~~----~~~-----------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          244 NQISK----LHA-----------IIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             SHHHH----HHH-----------HHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHH----HHH-----------HHhcccc------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            22110    000           1110000      0001112367899999999999999999999986


No 231
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.5e-45  Score=332.94  Aligned_cols=255  Identities=16%  Similarity=0.221  Sum_probs=194.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChh----------------hHHHHHHHHHHHHhhcCCCcceE-
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQH----------------ALEWCINHIVYASRMSHKHIIKL-  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~E~~~l~~l~H~nIv~~-  115 (332)
                      .++|.+.+.||+|+||.||+|.++++.||+|.+.......                ..+.+.+|+.++.+++||||+++ 
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4689999999999999999999999999999987542111                12789999999999999999987 


Q ss_pred             ----------EEEEeccCCChHHH------HhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeeecCCCCCCe
Q 038681          116 ----------IVFESVQIGTLADR------IHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFS-RPIVYRDMKPTNI  178 (332)
Q Consensus       116 ----------lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~Ni  178 (332)
                                +||||+++|+|.++      +...   ....+++..++.++.||+.||.|||   + +||+||||||+||
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI  183 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence                      89999999999999      5431   1257999999999999999999999   7 9999999999999


Q ss_pred             eeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC--CCCh-hhhHHHHHHHHHHHHhCCccCCCCCccc
Q 038681          179 LFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT--LINE-QCDVYGFGAFLFELLTAQEVSDHVSFES  255 (332)
Q Consensus       179 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~-~sDiwSlG~~l~elltg~~p~~~~~~~~  255 (332)
                      +++.++.+||+|||++.......    .....||+.|+|||++.+  .++. ++|||||||++|+|++|..||.......
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  259 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV  259 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTTE----ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred             EEcCCCcEEEecccccccccccc----ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            99999999999999998765442    145679999999999986  4555 9999999999999999999998665421


Q ss_pred             hhhhHHHHhhhhccccchhhhhhhhhhcc-cCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          256 RFHYEENVKRLSGQNCRFKEMVDSIIIED-KSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      .     ....+......+........... ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus       260 ~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          260 E-----LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             H-----HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             H-----HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1     11111111111110000000000 00000001234578999999999999999999999986


No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=4.9e-45  Score=328.39  Aligned_cols=247  Identities=15%  Similarity=0.223  Sum_probs=174.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHH-HHHhhcCCCcceE-----------E
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIV-YASRMSHKHIIKL-----------I  116 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~~-----------l  116 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||||++...........+..|+. +++.++||||+++           +
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            3457899999999999999999999  699999999987765555566777776 6677899999998           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      ||||+++ +|.+++..........+++..+..++.|++.||.|||   .. +|+||||||+||+++.++.+||+|||+++
T Consensus        99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999985 8888887533222357999999999999999999999   77 99999999999999999999999999998


Q ss_pred             ccCCCCceeeccccccCCCcccccccC----C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          196 SIPDGETHIELDSVVGTTGFIAPENFT----T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       196 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      ........   ....||+.|+|||++.    + .++.++|||||||++|+|++|..||.........    .........
T Consensus       175 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~  247 (327)
T 3aln_A          175 QLVDSIAK---TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ----LTQVVKGDP  247 (327)
T ss_dssp             C---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCC
T ss_pred             eccccccc---ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH----HHHHhcCCC
Confidence            76544322   3447899999999983    3 6899999999999999999999999754321100    000000000


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..              .........+..+.+|+.+||+.||.+|||+.++++
T Consensus       248 ~~--------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          248 PQ--------------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CC--------------CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC--------------CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            00              000011133478999999999999999999999976


No 233
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=3.4e-46  Score=334.55  Aligned_cols=257  Identities=18%  Similarity=0.294  Sum_probs=196.4

Q ss_pred             cccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhhcCCCcceE------
Q 038681           43 IFSAEELRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRN-QHALEWCINHIVYASRMSHKHIIKL------  115 (332)
Q Consensus        43 ~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~------  115 (332)
                      .....++....++|.+.+.||+|+||.||+|.+.+ .+|+|.+..... ....+.+.+|+.++.+++||||+++      
T Consensus        22 ~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS  100 (319)
T ss_dssp             CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred             ccccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            34556666778899999999999999999999865 499999875432 2234567889999999999999987      


Q ss_pred             -----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEee
Q 038681          116 -----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFD  190 (332)
Q Consensus       116 -----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D  190 (332)
                           +||||+++++|.+++...    ...+++..++.++.||+.||.|||   +++|+||||||+||+++ ++.+||+|
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~D  172 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITD  172 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECC
T ss_pred             CCceEEEeecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEee
Confidence                 899999999999999764    136899999999999999999999   99999999999999998 68999999


Q ss_pred             cCCccccCCCC---ceeeccccccCCCcccccccCC----------CCChhhhHHHHHHHHHHHHhCCccCCCCCccchh
Q 038681          191 FSLSLSIPDGE---THIELDSVVGTTGFIAPENFTT----------LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRF  257 (332)
Q Consensus       191 fg~a~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~----------~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~  257 (332)
                      ||+++......   .........||+.|+|||++.+          .++.++|||||||++|||++|..||.........
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  252 (319)
T 2y4i_B          173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII  252 (319)
T ss_dssp             CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred             cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            99987653211   1111134568999999999863          4789999999999999999999999865543221


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHHh
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYRS  330 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~~  330 (332)
                      .     .........                 ......+..+.+|+.+||+.||.+|||+.++++.|+++.+.
T Consensus       253 ~-----~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          253 W-----QMGTGMKPN-----------------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             H-----HHHTTCCCC-----------------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             H-----HhccCCCCC-----------------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            1     000000000                 00012235689999999999999999999999999887643


No 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.2e-44  Score=331.40  Aligned_cols=256  Identities=16%  Similarity=0.213  Sum_probs=190.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-----------CCCcceE----
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-----------HKHIIKL----  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~~----  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++....  ...+.+.+|+.++.+++           ||||+++    
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            46799999999999999999998  89999999997542  33567889999999886           7899875    


Q ss_pred             -----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeC--
Q 038681          116 -----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFN--  181 (332)
Q Consensus       116 -----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~--  181 (332)
                                 +||||+ +++|.+++.....   ..+++..+..++.||+.||.|||   ++ ||+||||||+|||++  
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~  168 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIV  168 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEE
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEecc
Confidence                       799999 8899999986421   35999999999999999999999   87 999999999999994  


Q ss_pred             ----CCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccch
Q 038681          182 ----EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESR  256 (332)
Q Consensus       182 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~  256 (332)
                          ..+.+||+|||++.......     ....||+.|+|||++.+ .++.++|||||||++|||++|..||........
T Consensus       169 ~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  243 (373)
T 1q8y_A          169 DSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY  243 (373)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence                44579999999998765432     34578999999999987 789999999999999999999999986543211


Q ss_pred             h----hhHHHHhhhhccccchh-------hhhhhh--hh-----------cccCCCCCChHHHHHHHHHHHHHcccCCCC
Q 038681          257 F----HYEENVKRLSGQNCRFK-------EMVDSI--II-----------EDKSCTCTGKEQQLQAFKQLTLQCMDFSPE  312 (332)
Q Consensus       257 ~----~~~~~~~~~~~~~~~~~-------~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~  312 (332)
                      .    ........+...+..+.       ..++..  ..           .........+...+..+.+||.+||+.||.
T Consensus       244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  323 (373)
T 1q8y_A          244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR  323 (373)
T ss_dssp             -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred             CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcc
Confidence            1    11111111111100000       000000  00           000001123357788999999999999999


Q ss_pred             CCCCHHHHHH
Q 038681          313 DRPTMVDVAK  322 (332)
Q Consensus       313 ~RPs~~evl~  322 (332)
                      +|||+.|+++
T Consensus       324 ~Rpt~~ell~  333 (373)
T 1q8y_A          324 KRADAGGLVN  333 (373)
T ss_dssp             TCBCHHHHHT
T ss_pred             ccCCHHHHhh
Confidence            9999999986


No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.6e-44  Score=320.82  Aligned_cols=239  Identities=22%  Similarity=0.360  Sum_probs=183.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|++.+.||+|+||.||+|.+  +++.||+|.+...  ....+.+.+|+.++++++||||+++               
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            45699999999999999999998  7899999999643  3346788999999999999999864               


Q ss_pred             ---------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCe
Q 038681          116 ---------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDA  186 (332)
Q Consensus       116 ---------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~  186 (332)
                               +||||+++|+|.+++....    ..+++..++.++.||+.||.|||   +++|+||||||+||+++.++.+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~  155 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNV  155 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCE
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCE
Confidence                     7999999999999997641    35788999999999999999999   8999999999999999999999


Q ss_pred             EEeecCCccccCCCCc------------eeeccccccCCCcccccccCC--CCChhhhHHHHHHHHHHHHhCCccCCCCC
Q 038681          187 KLFDFSLSLSIPDGET------------HIELDSVVGTTGFIAPENFTT--LINEQCDVYGFGAFLFELLTAQEVSDHVS  252 (332)
Q Consensus       187 kl~Dfg~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~--~~~~~sDiwSlG~~l~elltg~~p~~~~~  252 (332)
                      ||+|||++........            ........||+.|+|||++.+  .++.++|||||||++|+|++   ||....
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~  232 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM  232 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence            9999999976643211            111234578999999999875  68999999999999999998   443211


Q ss_pred             ccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          253 FESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ...     .....+......              .+.......+..+.+|+.+||+.||.+|||+.++++
T Consensus       233 ~~~-----~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          233 ERV-----NILKKLRSVSIE--------------FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHH-----HHHHHHHSTTCC--------------CCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHH-----HHHHhccccccc--------------cCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            110     011111111000              111112234467899999999999999999999986


No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.1e-43  Score=326.57  Aligned_cols=193  Identities=20%  Similarity=0.299  Sum_probs=163.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCC-----cceE-------
Q 038681           51 IATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKH-----IIKL-------  115 (332)
Q Consensus        51 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~n-----Iv~~-------  115 (332)
                      ...++|.+.+.||+|+||.||+|.+  +++.||||++...  ......+.+|+.++..++ |+|     |+++       
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            3457899999999999999999998  7899999999754  233567888999999985 554     6665       


Q ss_pred             ----EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC--CCCCeEEe
Q 038681          116 ----IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN--EQSDAKLF  189 (332)
Q Consensus       116 ----lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~  189 (332)
                          |||||++ |+|.+++....   ...+++..+..++.||+.||.|||+. ..||+||||||+|||++  .++.+||+
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~  203 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV  203 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred             CceEEEEecCC-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence                8999996 59999998652   13589999999999999999999932 36899999999999994  47889999


Q ss_pred             ecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccc
Q 038681          190 DFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFES  255 (332)
Q Consensus       190 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~  255 (332)
                      |||+++......     ....||+.|+|||++.+ .++.++|||||||++|||++|..||.......
T Consensus       204 DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  265 (382)
T 2vx3_A          204 DFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD  265 (382)
T ss_dssp             CCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             eccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999998765432     35678999999999988 89999999999999999999999998765543


No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.2e-44  Score=327.26  Aligned_cols=238  Identities=20%  Similarity=0.282  Sum_probs=163.1

Q ss_pred             hcCCCCCC-ccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHH-HHHHhhcCCCcceE-------------
Q 038681           53 TNNYDEQN-IVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHI-VYASRMSHKHIIKL-------------  115 (332)
Q Consensus        53 ~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~H~nIv~~-------------  115 (332)
                      .++|.+.+ .||+|+||.||+|.+  +++.||||++....      ...+|+ ..+..+.||||+++             
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            46788854 699999999999999  68999999997542      122333 33566789999986             


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEEee
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFD  190 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~D  190 (332)
                        +||||+++|+|.+++.....   ..+++..++.++.||+.||.|||   +++|+||||||+|||++.   ++.+||+|
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             EEEEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEec
Confidence              79999999999999986521   36999999999999999999999   899999999999999976   45599999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhcc
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQ  269 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  269 (332)
                      ||+++.......    ....||+.|+|||++.+ .++.++|||||||++|+|++|..||...........  .....   
T Consensus       175 fg~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~---  245 (336)
T 3fhr_A          175 FGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRI---  245 (336)
T ss_dssp             CTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred             cccceecccccc----ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhh---
Confidence            999986654332    34578999999999976 789999999999999999999999976543221100  00000   


Q ss_pred             ccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          270 NCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 .......+.+.....+..+.+|+.+||+.||.+|||+.++++
T Consensus       246 -----------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          246 -----------RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ----------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----------hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                       000000111111234578999999999999999999999987


No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=5.2e-45  Score=327.46  Aligned_cols=241  Identities=19%  Similarity=0.294  Sum_probs=190.3

Q ss_pred             CcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-----hhHHHHHHHHHHHHhhc--CC
Q 038681           40 PYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-----HALEWCINHIVYASRMS--HK  110 (332)
Q Consensus        40 ~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~--H~  110 (332)
                      +....+..+.....++|.+.+.||+|+||.||+|.+  +++.||||.+......     ...+.+.+|+.++.+++  ||
T Consensus        29 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~  108 (320)
T 3a99_A           29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS  108 (320)
T ss_dssp             -----------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSC
T ss_pred             hhccCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCC
Confidence            334445555666678899999999999999999998  8899999999765321     11345678999999996  59


Q ss_pred             CcceE-----------EEEEeccC-CChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 038681          111 HIIKL-----------IVFESVQI-GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNI  178 (332)
Q Consensus       111 nIv~~-----------lv~e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Ni  178 (332)
                      ||+++           +|+|++.+ ++|.+++...     ..+++..++.++.||+.||.|||   +.+|+||||||+||
T Consensus       109 ~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NI  180 (320)
T 3a99_A          109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENI  180 (320)
T ss_dssp             SBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGE
T ss_pred             CceEEEEEEecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHE
Confidence            99987           89999976 8999999876     57999999999999999999999   99999999999999


Q ss_pred             eeC-CCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccc
Q 038681          179 LFN-EQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFES  255 (332)
Q Consensus       179 ll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~  255 (332)
                      |++ .++.+||+|||+++.......    ....||+.|+|||++.+ . ++.++|||||||++|||++|..||.....  
T Consensus       181 ll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--  254 (320)
T 3a99_A          181 LIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--  254 (320)
T ss_dssp             EEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--
T ss_pred             EEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--
Confidence            998 788999999999987765432    34579999999999875 4 47899999999999999999999964311  


Q ss_pred             hhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          256 RFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                            .   ... ...                  .....+..+.+|+.+||+.||++|||+.+|++
T Consensus       255 ------~---~~~-~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          255 ------I---IRG-QVF------------------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             ------H---HHC-CCC------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------h---hcc-ccc------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  0   000 000                  00123367899999999999999999999986


No 239
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.6e-44  Score=323.23  Aligned_cols=259  Identities=20%  Similarity=0.259  Sum_probs=192.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEe---CCeeEEEEEEcCCCC-hhhHHHHHHHHHHHHhh---cCCCcceE---------
Q 038681           52 ATNNYDEQNIVLEDPFRKLYKGFW---QKRSISLMKYNGNRN-QHALEWCINHIVYASRM---SHKHIIKL---------  115 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~nIv~~---------  115 (332)
                      ..++|.+.+.||+|+||.||+|.+   +++.||+|++..... ......+.+|+.+++.+   +||||+++         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999998   578899999865432 11123466788877776   89999986         


Q ss_pred             -------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEE
Q 038681          116 -------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKL  188 (332)
Q Consensus       116 -------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl  188 (332)
                             +||||++ |+|.+++.....   ..+++..++.++.||+.||.|||   ++||+||||||+||+++.++.+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEE
Confidence                   7999998 699999976521   34899999999999999999999   999999999999999999999999


Q ss_pred             eecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhh
Q 038681          189 FDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      +|||+++.......   .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..........  .......
T Consensus       162 ~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~i~~~~~  236 (326)
T 1blx_A          162 ADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG--KILDVIG  236 (326)
T ss_dssp             CSCCSCCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHC
T ss_pred             ecCcccccccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHHHcC
Confidence            99999976643321   245678999999999987 89999999999999999999999998765433211  1111111


Q ss_pred             c-cccchhhhh---hhhhhc-ccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          268 G-QNCRFKEMV---DSIIIE-DKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       268 ~-~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      . ....+....   ...... ............+..+.+|+.+||+.||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0 000110000   000000 000000011234578899999999999999999999985


No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.1e-43  Score=320.63  Aligned_cols=253  Identities=18%  Similarity=0.250  Sum_probs=190.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CC-eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCC------cceE--------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QK-RSISLMKYNGNRNQHALEWCINHIVYASRMSHKH------IIKL--------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~~--------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  ++ ..||+|++...  ....+.+.+|+.++++++|++      ++.+        
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            46799999999999999999998  44 78999999754  233577889999999998766      6654        


Q ss_pred             ---EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee------------
Q 038681          116 ---IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILF------------  180 (332)
Q Consensus       116 ---lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill------------  180 (332)
                         +||||+ +|+|.+++....   ...+++..++.++.||+.||.|||   +++|+||||||+|||+            
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~  168 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEH  168 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred             eEEEEEecc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccc
Confidence               899999 567888776542   136999999999999999999999   9999999999999999            


Q ss_pred             -------CCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCC
Q 038681          181 -------NEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVS  252 (332)
Q Consensus       181 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~  252 (332)
                             +.++.+||+|||+++......     ....||+.|+|||++.+ .++.++|||||||++|||++|..||....
T Consensus       169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (355)
T 2eu9_A          169 KSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE  243 (355)
T ss_dssp             -CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence                   567899999999998654433     34579999999999987 89999999999999999999999998765


Q ss_pred             ccchhhhHHHHhhhhccccchhh-----------------------hhhhhhhcccCCCCCChHHHHHHHHHHHHHcccC
Q 038681          253 FESRFHYEENVKRLSGQNCRFKE-----------------------MVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDF  309 (332)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  309 (332)
                      .......  ........+..+..                       ...... .............+..+.+|+.+||+.
T Consensus       244 ~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~L~~  320 (355)
T 2eu9_A          244 NREHLVM--MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC-KPLKSYMLQDSLEHVQLFDLMRRMLEF  320 (355)
T ss_dssp             HHHHHHH--HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC-CCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHH--HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccC-CcccccccccchhHHHHHHHHHHHhcC
Confidence            4432211  11111111100000                       000000 000000111234567899999999999


Q ss_pred             CCCCCCCHHHHHH
Q 038681          310 SPEDRPTMVDVAK  322 (332)
Q Consensus       310 dP~~RPs~~evl~  322 (332)
                      ||++|||+.|+++
T Consensus       321 dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          321 DPAQRITLAEALL  333 (355)
T ss_dssp             STTTSCCHHHHTT
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999975


No 241
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2.8e-44  Score=346.84  Aligned_cols=263  Identities=15%  Similarity=0.206  Sum_probs=197.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE---------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL---------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~---------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.........+.+.+|+.++.+++||||+++               
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            37899999999999999999998  7899999999877666667889999999999999999987               


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCC---eEEee
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSD---AKLFD  190 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~D  190 (332)
                        +||||+++|+|.+++.....  ...+++..++.++.||+.||.|||   +.||+||||||+||+++.++.   +||+|
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~D  167 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID  167 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred             EEEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence              89999999999999986421  135899999999999999999999   899999999999999997765   89999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCC-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhc-
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSG-  268 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-  268 (332)
                      ||++.........   ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........     ...... 
T Consensus       168 FG~a~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~-----~~~i~~~  239 (676)
T 3qa8_A          168 LGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW-----HGKVREK  239 (676)
T ss_dssp             CCCCCBTTSCCCC---CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHS-----STTCC--
T ss_pred             ccccccccccccc---ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhh-----hhhhhcc
Confidence            9999877654432   45679999999999987 8999999999999999999999999754321110     000000 


Q ss_pred             --cccchhhhhhhhhh--cccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHH-----HHHHHHHH
Q 038681          269 --QNCRFKEMVDSIII--EDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDV-----AKQLRQMY  328 (332)
Q Consensus       269 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ev-----l~~L~~l~  328 (332)
                        ......+.......  ...+.+.......+..+.+|+.+||..||++|||+.++     .+.+..+.
T Consensus       240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence              00000000000000  00111222334567899999999999999999999884     45555544


No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=2.2e-44  Score=322.52  Aligned_cols=253  Identities=19%  Similarity=0.260  Sum_probs=178.3

Q ss_pred             CCcccccHHHHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHH-HHHHHHHHHhhcCCCcceE
Q 038681           39 NPYRIFSAEELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEW-CINHIVYASRMSHKHIIKL  115 (332)
Q Consensus        39 ~~~~~~~~~el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~H~nIv~~  115 (332)
                      .+...+...+.....++|.+.+.||+|+||.||+|.+  +++.||||++........... +.++..++..++||||+++
T Consensus        10 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   89 (318)
T 2dyl_A           10 TGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC   89 (318)
T ss_dssp             CCSEEESSSEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CceEEecchhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeE
Confidence            3444444444555567899999999999999999999  789999999987655443344 4444556788899999997


Q ss_pred             -----------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCCeeeCCC
Q 038681          116 -----------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSR-PIVYRDMKPTNILFNEQ  183 (332)
Q Consensus       116 -----------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~Nill~~~  183 (332)
                                 +||||+ ++.+..+....    ...+++..+..++.||+.||.|||   .. ||+|+||||+||+++.+
T Consensus        90 ~~~~~~~~~~~lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~  161 (318)
T 2dyl_A           90 FGTFITNTDVFIAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDER  161 (318)
T ss_dssp             EEEEECSSEEEEEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTT
T ss_pred             EEEEecCCcEEEEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCC
Confidence                       899999 45565555432    146999999999999999999999   74 99999999999999999


Q ss_pred             CCeEEeecCCccccCCCCceeeccccccCCCcccccccC-----C-CCChhhhHHHHHHHHHHHHhCCccCCCCCccchh
Q 038681          184 SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT-----T-LINEQCDVYGFGAFLFELLTAQEVSDHVSFESRF  257 (332)
Q Consensus       184 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~-~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~  257 (332)
                      +.+||+|||++.........   ....||+.|+|||++.     + .++.++|||||||++|+|++|..||.........
T Consensus       162 ~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  238 (318)
T 2dyl_A          162 GQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV  238 (318)
T ss_dssp             SCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred             CCEEEEECCCchhccCCccc---cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH
Confidence            99999999999766543322   3457899999999984     3 6889999999999999999999999764322110


Q ss_pred             hhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          258 HYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                          ..........                ..+.....+..+.+|+.+||+.||.+|||+.++++
T Consensus       239 ----~~~~~~~~~~----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          239 ----LTKVLQEEPP----------------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             ----HHHHHHSCCC----------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ----HHHHhccCCC----------------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                1111111100                00111123477999999999999999999999986


No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=3e-44  Score=321.05  Aligned_cols=233  Identities=19%  Similarity=0.266  Sum_probs=186.5

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh-----hhHHHHHHHHHHHHhh----cCCCcceE-
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ-----HALEWCINHIVYASRM----SHKHIIKL-  115 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~H~nIv~~-  115 (332)
                      +.+...++|.+.+.||+|+||.||+|.+  +++.||+|.+......     .....+.+|+.++.++    +||||+++ 
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            3445567899999999999999999998  7889999999765321     1233467899999999    89999998 


Q ss_pred             ----------EEEEe-ccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC-CC
Q 038681          116 ----------IVFES-VQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN-EQ  183 (332)
Q Consensus       116 ----------lv~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~  183 (332)
                                +|+|+ +++++|.+++...     ..+++..++.++.||+.||.|||   +++|+||||||+||+++ .+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~  176 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRR  176 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTT
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCC
Confidence                      89999 7899999999876     56999999999999999999999   89999999999999999 88


Q ss_pred             CCeEEeecCCccccCCCCceeeccccccCCCcccccccCC-C-CChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHH
Q 038681          184 SDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTT-L-INEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEE  261 (332)
Q Consensus       184 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~  261 (332)
                      +.+||+|||++........    ....||+.|+|||++.+ . .+.++|||||||++|+|++|+.||.....        
T Consensus       177 ~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------  244 (312)
T 2iwi_A          177 GCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------  244 (312)
T ss_dssp             TEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------
T ss_pred             CeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------
Confidence            9999999999987765432    35578999999999875 4 45699999999999999999999964211        


Q ss_pred             HHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          262 NVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..   .. ...                  .+...+..+.+|+.+||+.||++|||+.++++
T Consensus       245 ~~---~~-~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          245 IL---EA-ELH------------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HH---HT-CCC------------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             Hh---hh-ccC------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00   00 000                  01123467899999999999999999999986


No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-43  Score=331.12  Aligned_cols=238  Identities=19%  Similarity=0.286  Sum_probs=177.7

Q ss_pred             HhcCCCCCCccccCCCceE-EEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           52 ATNNYDEQNIVLEDPFRKL-YKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        52 ~~~~y~~~~~lg~G~~g~V-y~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      ...+|.+.+.||+|+||+| |++..+++.||||++......    .+.+|+.+++++ +|||||++           |||
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~   97 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI   97 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence            3456899999999999985 555559999999999765432    356899999999 79999998           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC-----CCCeEEeecCC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE-----QSDAKLFDFSL  193 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~-----~~~~kl~Dfg~  193 (332)
                      |||+ |+|.+++....    ...++..+..++.||+.||.|||   +++|+||||||+|||++.     ...+||+|||+
T Consensus        98 E~~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           98 ELCA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             ECCS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             ECCC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            9996 59999997652    23455567899999999999999   999999999999999953     33588999999


Q ss_pred             ccccCCCCce-eeccccccCCCcccccccCC----CCChhhhHHHHHHHHHHHHh-CCccCCCCCccchhhhHHHHhhhh
Q 038681          194 SLSIPDGETH-IELDSVVGTTGFIAPENFTT----LINEQCDVYGFGAFLFELLT-AQEVSDHVSFESRFHYEENVKRLS  267 (332)
Q Consensus       194 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~----~~~~~sDiwSlG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  267 (332)
                      ++........ .......||+.|+|||++.+    .++.++|||||||++|||++ |..||.........      ....
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~------~~~~  243 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN------ILLG  243 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH------HHTT
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH------HHhc
Confidence            9876543221 12245679999999999973    67889999999999999999 89998644322110      0000


Q ss_pred             ccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          268 GQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      ..  ..             .........+..+.+|+.+||+.||.+|||+.+|++
T Consensus       244 ~~--~~-------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          244 AC--SL-------------DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CC--CC-------------TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cC--Cc-------------cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            00  00             000111245567899999999999999999999984


No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=5.8e-43  Score=326.81  Aligned_cols=248  Identities=20%  Similarity=0.286  Sum_probs=177.6

Q ss_pred             HHHHHhcC-CCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-cCCCcceE---------
Q 038681           48 ELRIATNN-YDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRM-SHKHIIKL---------  115 (332)
Q Consensus        48 el~~~~~~-y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~---------  115 (332)
                      ++....++ |...+.||+|+||+||.+.. +|+.||||++....    .+.+.+|+.++.++ +|||||++         
T Consensus         8 ~~~~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~   83 (434)
T 2rio_A            8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRF   83 (434)
T ss_dssp             CCSCSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred             chhhhhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence            33333344 44568899999999976544 89999999986542    45678999999987 89999998         


Q ss_pred             --EEEEeccCCChHHHHhhhhcccc--cCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCC--------
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHF--EALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQ--------  183 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--------  183 (332)
                        ||||||+ |+|.+++........  ...++..++.++.||+.||+|||   +++|+||||||+|||++.+        
T Consensus        84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~  159 (434)
T 2rio_A           84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQ  159 (434)
T ss_dssp             EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred             EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccc
Confidence              8999996 699999986521110  11233456789999999999999   9999999999999999754        


Q ss_pred             -----CCeEEeecCCccccCCCCcee--eccccccCCCcccccccCC--------CCChhhhHHHHHHHHHHHHh-CCcc
Q 038681          184 -----SDAKLFDFSLSLSIPDGETHI--ELDSVVGTTGFIAPENFTT--------LINEQCDVYGFGAFLFELLT-AQEV  247 (332)
Q Consensus       184 -----~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~--------~~~~~sDiwSlG~~l~ellt-g~~p  247 (332)
                           +.+||+|||+++.........  ......||+.|+|||++.+        .++.++|||||||++|||++ |..|
T Consensus       160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P  239 (434)
T 2rio_A          160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP  239 (434)
T ss_dssp             TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence                 479999999998776543211  1234579999999999853        58899999999999999999 9999


Q ss_pred             CCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          248 SDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                      |........       ...... ..           ............+.++.+|+.+||+.||.+|||+.+|++
T Consensus       240 f~~~~~~~~-------~i~~~~-~~-----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          240 FGDKYSRES-------NIIRGI-FS-----------LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             TCSTTTHHH-------HHHHTC-CC-----------CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCchhhHH-------HHhcCC-CC-----------cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            975432211       000000 00           000011123466788999999999999999999999985


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.8e-43  Score=344.65  Aligned_cols=231  Identities=23%  Similarity=0.324  Sum_probs=190.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe---CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcceE--------------
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW---QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIKL--------------  115 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~--------------  115 (332)
                      .++|.+.+.||+|+||.||+|.+   +++.||||.+.........+.+.+|+.++.+++||||+++              
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            37899999999999999999998   5899999998876666667789999999999999999976              


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCC
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSL  193 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  193 (332)
                        |||||+++++|.+++..       .+++..++.++.||+.||.|||   ++||+||||||+|||++.+ .+||+|||+
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEeccc
Confidence              89999999999987753       5899999999999999999999   9999999999999999875 899999999


Q ss_pred             ccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccch
Q 038681          194 SLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRF  273 (332)
Q Consensus       194 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (332)
                      ++.....      ....||+.|+|||++.+.++.++|||||||++|+|++|..||........                 
T Consensus       228 a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------  284 (681)
T 2pzi_A          228 VSRINSF------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------  284 (681)
T ss_dssp             CEETTCC------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------
T ss_pred             chhcccC------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc-----------------
Confidence            9876543      34579999999999987679999999999999999999988864321110                 


Q ss_pred             hhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHHHHh
Q 038681          274 KEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRP-TMVDVAKQLRQMYRS  330 (332)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~l~~~  330 (332)
                      .             ........+..+.+|+.+||+.||.+|| +++++...|..+.+.
T Consensus       285 ~-------------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  329 (681)
T 2pzi_A          285 P-------------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE  329 (681)
T ss_dssp             C-------------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred             c-------------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence            0             0000112346789999999999999999 577787888776643


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.3e-42  Score=306.87  Aligned_cols=220  Identities=15%  Similarity=0.130  Sum_probs=176.3

Q ss_pred             cCCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhcCCCcceE-----------EEE
Q 038681           54 NNYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN--QHALEWCINHIVYASRMSHKHIIKL-----------IVF  118 (332)
Q Consensus        54 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~-----------lv~  118 (332)
                      ++|.+.+.||+|+||.||+|.+  +++.||||.+.....  ....+.+.+|+.++.+++||||+++           +||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            6799999999999999999999  589999999986643  4446789999999999999999997           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++++|.+++...       ....++..++.||+.||.|||   ++||+||||||+|||++.++.+||+++|      
T Consensus       111 e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------  174 (286)
T ss_dssp             ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred             EecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc------
Confidence            999999999999542       456678999999999999999   9999999999999999999999998543      


Q ss_pred             CCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhh
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVD  278 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (332)
                                      |++      .++.++|||||||++|||++|+.||...........  ..............   
T Consensus       175 ----------------~~~------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~~---  227 (286)
T 3uqc_A          175 ----------------TMP------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQPIEPAD---  227 (286)
T ss_dssp             ----------------CCT------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSCBCCHHH---
T ss_pred             ----------------ccC------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccCCCChhh---
Confidence                            233      378899999999999999999999987654331100  00000000000000   


Q ss_pred             hhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHH
Q 038681          279 SIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQLRQMYR  329 (332)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~l~~  329 (332)
                                  .....+..+.+|+.+||+.||.+| |+.++++.|+++..
T Consensus       228 ------------~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          228 ------------IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             ------------HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             ------------cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence                        001334779999999999999999 99999999998763


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.6e-42  Score=320.37  Aligned_cols=230  Identities=14%  Similarity=0.143  Sum_probs=177.3

Q ss_pred             CCCCCCccccCCCceEEEEEe--CCeeEEEEEEcCCCCh--hhHHHHHHHHHHHHhhcC-CCcc----------------
Q 038681           55 NYDEQNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQ--HALEWCINHIVYASRMSH-KHII----------------  113 (332)
Q Consensus        55 ~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H-~nIv----------------  113 (332)
                      +|...+.||+|+||.||+|.+  +|+.||||++......  ...+.+.+|+.++..++| +|..                
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            467788999999999999998  6999999998844332  236778999999999977 2210                


Q ss_pred             --------------------eE-EEEEeccCCChHHHHhhhh--cccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 038681          114 --------------------KL-IVFESVQIGTLADRIHHHC--EQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVY  170 (332)
Q Consensus       114 --------------------~~-lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH  170 (332)
                                          .+ ++|+++ +|+|.+++....  ......+++..++.++.||+.||+|||   +++|+|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiH  234 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH  234 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence                                11 455544 679999985321  111245788899999999999999999   999999


Q ss_pred             cCCCCCCeeeCCCCCeEEeecCCccccCCCCceeeccccccCCCccccccc----------CC-CCChhhhHHHHHHHHH
Q 038681          171 RDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENF----------TT-LINEQCDVYGFGAFLF  239 (332)
Q Consensus       171 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~-~~~~~sDiwSlG~~l~  239 (332)
                      |||||+|||++.++.+||+|||+++.....     .....| +.|+|||++          .+ .++.++|||||||++|
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~  308 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY  308 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence            999999999999999999999998765433     145567 999999998          44 6889999999999999


Q ss_pred             HHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038681          240 ELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVD  319 (332)
Q Consensus       240 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e  319 (332)
                      ||++|+.||..........                    .......        ..++.+.+|+.+||+.||++|||+.+
T Consensus       309 elltg~~Pf~~~~~~~~~~--------------------~~~~~~~--------~~~~~~~~li~~~l~~dP~~Rpt~~~  360 (413)
T 3dzo_A          309 WIWCADLPNTDDAALGGSE--------------------WIFRSCK--------NIPQPVRALLEGFLRYPKEDRLLPLQ  360 (413)
T ss_dssp             HHHHSSCCCCTTGGGSCSG--------------------GGGSSCC--------CCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHCCCCCCCcchhhhHH--------------------HHHhhcc--------cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999997654322111                    0000000        12367999999999999999999888


Q ss_pred             HHH
Q 038681          320 VAK  322 (332)
Q Consensus       320 vl~  322 (332)
                      +++
T Consensus       361 ~l~  363 (413)
T 3dzo_A          361 AME  363 (413)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            754


No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=2e-41  Score=301.20  Aligned_cols=219  Identities=19%  Similarity=0.273  Sum_probs=169.0

Q ss_pred             hcCCCCC-CccccCCCceEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHH-HhhcCCCcceE-------------
Q 038681           53 TNNYDEQ-NIVLEDPFRKLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYA-SRMSHKHIIKL-------------  115 (332)
Q Consensus        53 ~~~y~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~~-------------  115 (332)
                      .++|.+. +.||+|+||.||+|.+  +++.||+|.+...      ..+.+|+.++ +.++||||+++             
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            3567776 7799999999999999  7899999999643      4567899888 44589999986             


Q ss_pred             --EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC---CCCeEEee
Q 038681          116 --IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE---QSDAKLFD  190 (332)
Q Consensus       116 --lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~D  190 (332)
                        +||||+++|+|.+++.....   ..+++..++.++.||+.||.|||   +.+|+||||||+||+++.   ++.+||+|
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             EEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence              79999999999999987521   36999999999999999999999   999999999999999998   78899999


Q ss_pred             cCCccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCCCCCccchhhhHHHHhhhhccc
Q 038681          191 FSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSDHVSFESRFHYEENVKRLSGQN  270 (332)
Q Consensus       191 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (332)
                      ||++.....                       ..++.++|||||||++|||++|..||...........  ......   
T Consensus       164 fg~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--~~~~~~---  215 (299)
T 3m2w_A          164 FGFAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIR---  215 (299)
T ss_dssp             CTTCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--SCCSSC---
T ss_pred             ccccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--HHHHHh---
Confidence            999854321                       2467899999999999999999999976543221000  000000   


Q ss_pred             cchhhhhhhhhhcccCCCCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038681          271 CRFKEMVDSIIIEDKSCTCTGKEQQLQAFKQLTLQCMDFSPEDRPTMVDVAK  322 (332)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~  322 (332)
                                 ......+.+.....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       216 -----------~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          216 -----------MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             -----------TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----------hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                       00000000000134578999999999999999999999986


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.2e-41  Score=307.54  Aligned_cols=233  Identities=17%  Similarity=0.196  Sum_probs=179.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCC-------ChhhHHHHHHHHHHHHhhc---------CCCcce--
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNR-------NQHALEWCINHIVYASRMS---------HKHIIK--  114 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~---------H~nIv~--  114 (332)
                      .++|.+.+.||+|+||.||+|+++++.||||++....       .....+.+.+|+.+++.++         |||||+  
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4669999999999999999999999999999997653       2233578899999999986         555542  


Q ss_pred             ---------------------------------------EEEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHH
Q 038681          115 ---------------------------------------LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAH  155 (332)
Q Consensus       115 ---------------------------------------~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~  155 (332)
                                                             +|||||+++|++.+.+..      ..+++..++.++.||+.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~  172 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTA  172 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHH
Confidence                                                   289999999977776643      35899999999999999


Q ss_pred             HHHHhhhcCCCCeeecCCCCCCeeeCCCC--------------------CeEEeecCCccccCCCCceeeccccccCCCc
Q 038681          156 AVAYLHVGFSRPIVYRDMKPTNILFNEQS--------------------DAKLFDFSLSLSIPDGETHIELDSVVGTTGF  215 (332)
Q Consensus       156 ~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y  215 (332)
                      ||.|||+  +++|+||||||+|||++.++                    .+||+|||+|+.....       ...||+.|
T Consensus       173 aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y  243 (336)
T 2vuw_A          173 SLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVS  243 (336)
T ss_dssp             HHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCT
T ss_pred             HHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecc
Confidence            9999993  47999999999999999887                    8999999999876532       34799999


Q ss_pred             ccccccCCCCChhhhHHHHHHH-HHHHHhCCccCCCCCccchhhhHHHHhhhhccccchhhhhhhhhhcccCCCCCChHH
Q 038681          216 IAPENFTTLINEQCDVYGFGAF-LFELLTAQEVSDHVSFESRFHYEENVKRLSGQNCRFKEMVDSIIIEDKSCTCTGKEQ  294 (332)
Q Consensus       216 ~aPE~~~~~~~~~sDiwSlG~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (332)
                      +|||++.+..+.++||||||++ .+++++|..||........     ....          +.. ...............
T Consensus       244 ~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~-----~~~~----------~~~-~~~~~~~~~~~~~~~  307 (336)
T 2vuw_A          244 MDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY-----LTDK----------MLK-QMTFKTKCNTPAMKQ  307 (336)
T ss_dssp             TCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH-----HHHH----------HHH-TCCCSSCCCSHHHHH
T ss_pred             cChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhH-----HHHh----------hhh-hhccCcccchhhhhh
Confidence            9999999855999999998777 7788899998853210000     0000          000 000011111122346


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038681          295 QLQAFKQLTLQCMDFSPEDRPTMVDVA  321 (332)
Q Consensus       295 ~~~~~~~li~~cl~~dP~~RPs~~evl  321 (332)
                      .++++.+||.+||+.|     |+.|++
T Consensus       308 ~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          308 IKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             cCHHHHHHHHHHhccC-----CHHHHH
Confidence            7889999999999977     999987


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=2.4e-35  Score=283.20  Aligned_cols=174  Identities=14%  Similarity=0.070  Sum_probs=122.3

Q ss_pred             cccCCCceEEEEEe--CCeeEEEEEEcCCC---------ChhhHHHHHHHHHHHHhh-cCCCcceE-----------EEE
Q 038681           62 VLEDPFRKLYKGFW--QKRSISLMKYNGNR---------NQHALEWCINHIVYASRM-SHKHIIKL-----------IVF  118 (332)
Q Consensus        62 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l-~H~nIv~~-----------lv~  118 (332)
                      .+.|++|.+..++.  .|..+++|.+....         .+...+.|.+|+++|+++ .|+||+++           |||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            45566666655544  78899999997652         123356799999999999 79999997           999


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||++||+|.++|...     ++++..   .|+.||+.||+|+|   ++|||||||||+|||++.+|.+||+|||+|+...
T Consensus       322 Eyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          322 EKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             ECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             ecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            999999999999876     567654   58899999999999   9999999999999999999999999999998775


Q ss_pred             CCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccC
Q 038681          199 DGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVS  248 (332)
Q Consensus       199 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~  248 (332)
                      .....  ..+.+||+.|+|||++.+.+..++|+||+|++++++.++..++
T Consensus       391 ~~~~~--~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          391 QDCSW--PTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             ---CC--SHHHHHHHHHHHHHHC-----------------CCCCTTHHHH
T ss_pred             CCCcc--ccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh
Confidence            54332  2467899999999999998888999999999998887765543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.96  E-value=1.2e-30  Score=249.10  Aligned_cols=175  Identities=14%  Similarity=0.117  Sum_probs=139.3

Q ss_pred             CCCCccccCCCceEEEEEeCCeeEEEEEEcCCCC--h-----hhHHHHHHHHHHHHhhcCCCcc--eE---------EEE
Q 038681           57 DEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRN--Q-----HALEWCINHIVYASRMSHKHII--KL---------IVF  118 (332)
Q Consensus        57 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--~-----~~~~~~~~E~~~l~~l~H~nIv--~~---------lv~  118 (332)
                      ...+.||+|+||.||+|...+..+++|+......  .     ...+++.+|+.++++++||||+  .+         |||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            4467899999999999988999999998755322  1     1245689999999999999999  33         999


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                      ||+++|+|.+++..             +..++.||+.||.|||   +++|+||||||+|||++.  .+||+|||+++...
T Consensus       419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            99999999999864             4589999999999999   999999999999999998  99999999998876


Q ss_pred             CCCcee-----eccccccCCCcccccccCC---CCChhhhHHHHHHHHHHHHhCCccCC
Q 038681          199 DGETHI-----ELDSVVGTTGFIAPENFTT---LINEQCDVYGFGAFLFELLTAQEVSD  249 (332)
Q Consensus       199 ~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~sDiwSlG~~l~elltg~~p~~  249 (332)
                      ......     ......||+.|+|||++..   .|+..+|+||..+-..+-+.++.+|.
T Consensus       481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            543211     1135689999999999975   67888999999998888887776663


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.93  E-value=1.4e-26  Score=203.52  Aligned_cols=144  Identities=15%  Similarity=0.087  Sum_probs=116.6

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCCh-----------------hhHHHHHHHHHHHHhhcC
Q 038681           48 ELRIATNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQ-----------------HALEWCINHIVYASRMSH  109 (332)
Q Consensus        48 el~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~H  109 (332)
                      .+......|.+.+.||+|+||.||+|.+ +|+.||+|.+......                 .....+.+|+.++++++|
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~  163 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG  163 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence            3444455677779999999999999999 7899999999754321                 135678999999999986


Q ss_pred             CCcceE-------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCC
Q 038681          110 KHIIKL-------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNE  182 (332)
Q Consensus       110 ~nIv~~-------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~  182 (332)
                      +++..+       +||||+++|+|.+ +..           .....++.|++.||.|||   +.||+||||||+|||++ 
T Consensus       164 ~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-  227 (282)
T 1zar_A          164 LAVPKVYAWEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-  227 (282)
T ss_dssp             SSSCCEEEEETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-
T ss_pred             CCcCeEEeccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-
Confidence            666654       8999999999988 421           124469999999999999   99999999999999999 


Q ss_pred             CCCeEEeecCCccccCCCCceeeccccccCCCcccccccC
Q 038681          183 QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFT  222 (332)
Q Consensus       183 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  222 (332)
                      ++.+||+|||+|+.               +..|.|||.+.
T Consensus       228 ~~~vkl~DFG~a~~---------------~~~~~a~e~l~  252 (282)
T 1zar_A          228 EEGIWIIDFPQSVE---------------VGEEGWREILE  252 (282)
T ss_dssp             TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred             CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence            99999999999853               44578898774


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.87  E-value=3e-22  Score=173.72  Aligned_cols=131  Identities=12%  Similarity=0.175  Sum_probs=103.3

Q ss_pred             CCCCCCccccCCCceEEEEEe--CCee--EEEEEEcCCCCh-----------------------hhHHHHHHHHHHHHhh
Q 038681           55 NYDEQNIVLEDPFRKLYKGFW--QKRS--ISLMKYNGNRNQ-----------------------HALEWCINHIVYASRM  107 (332)
Q Consensus        55 ~y~~~~~lg~G~~g~Vy~~~~--~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l  107 (332)
                      -|.+.+.||+|+||.||+|.+  +|+.  ||||++......                       .....+.+|+.++.++
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999998  8989  999987543211                       1123688999999999


Q ss_pred             cCCCc-----ceE----EEEEeccC-C----ChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 038681          108 SHKHI-----IKL----IVFESVQI-G----TLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDM  173 (332)
Q Consensus       108 ~H~nI-----v~~----lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl  173 (332)
                      .|++|     +.+    |||||+.+ |    +|.++...        .++..+..++.|++.||.|||.  ..||+||||
T Consensus       128 ~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl  197 (258)
T 1zth_A          128 KEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVHADL  197 (258)
T ss_dssp             HHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred             HhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence            87654     222    99999943 4    66665432        2345678899999999999995  589999999


Q ss_pred             CCCCeeeCCCCCeEEeecCCcccc
Q 038681          174 KPTNILFNEQSDAKLFDFSLSLSI  197 (332)
Q Consensus       174 kp~Nill~~~~~~kl~Dfg~a~~~  197 (332)
                      ||+|||++.  .++|+|||+|...
T Consensus       198 kp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEET
T ss_pred             CHHHEEEcC--cEEEEECcccccC
Confidence            999999988  8999999999654


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.78  E-value=1.8e-19  Score=163.01  Aligned_cols=132  Identities=14%  Similarity=0.108  Sum_probs=100.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCCh-----------------h----hHHHHHHHHHHHHhhcCC
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQ-----------------H----ALEWCINHIVYASRMSHK  110 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-----------------~----~~~~~~~E~~~l~~l~H~  110 (332)
                      ..-|++.+.||.|+||.||+|.. +|+.||||+++.....                 .    ..-...+|...|.++.++
T Consensus        94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            33489999999999999999998 8999999987542110                 0    011235678888888655


Q ss_pred             Ccce---------EEEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeC
Q 038681          111 HIIK---------LIVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFN  181 (332)
Q Consensus       111 nIv~---------~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~  181 (332)
                      ++.-         +|||||++|++|.++..           ......++.||+.+|.|||   ..|||||||||.|||++
T Consensus       174 gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          174 GFPVPEPIAQSRHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR  239 (397)
T ss_dssp             TCSCCCEEEEETTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred             CCCCCeeeeccCceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence            4421         28999999988865432           1234578899999999999   89999999999999998


Q ss_pred             CCCC----------eEEeecCCccccC
Q 038681          182 EQSD----------AKLFDFSLSLSIP  198 (332)
Q Consensus       182 ~~~~----------~kl~Dfg~a~~~~  198 (332)
                      .++.          +.|+||+.+-...
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             CCCCcccccccccceEEEEeCCcccCC
Confidence            7763          8899999886544


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.37  E-value=1.1e-12  Score=113.39  Aligned_cols=135  Identities=11%  Similarity=0.026  Sum_probs=100.8

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCCcceE-----------E
Q 038681           49 LRIATNNYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKHIIKL-----------I  116 (332)
Q Consensus        49 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~-----------l  116 (332)
                      +.....+|.+...++.|+.+.||++...+..+++|......... ...+.+|+.++..+. +..+.++           +
T Consensus         9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A            9 LKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC-HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            34455679888889999999999998888899999987532111 235788999999884 4333333           8


Q ss_pred             EEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------
Q 038681          117 VFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVG---------------------------------  163 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------------------------------  163 (332)
                      ||||++|.+|.+.+..          ......++.+++.+|..||+-                                 
T Consensus        88 v~e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T 3tm0_A           88 LMSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred             EEEecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence            9999999999876321          122347888999999999940                                 


Q ss_pred             -----------------------CCCCeeecCCCCCCeeeCCCCCeEEeecCCc
Q 038681          164 -----------------------FSRPIVYRDMKPTNILFNEQSDAKLFDFSLS  194 (332)
Q Consensus       164 -----------------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  194 (332)
                                             ....++|+|++|.||+++.++.+.|+||+.+
T Consensus       158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                                   0145999999999999987555679999876


No 257
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.20  E-value=3.3e-11  Score=109.04  Aligned_cols=132  Identities=14%  Similarity=0.117  Sum_probs=96.3

Q ss_pred             CCCccccCCCceEEEEEeCCeeEEEEEEc--CCCChhhHHHHHHHHHHHHhhcCCC--cceE--------------EEEE
Q 038681           58 EQNIVLEDPFRKLYKGFWQKRSISLMKYN--GNRNQHALEWCINHIVYASRMSHKH--IIKL--------------IVFE  119 (332)
Q Consensus        58 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~~--------------lv~e  119 (332)
                      ..+.|+.|.++.||+....+..+++|+..  ..........+.+|+.+++.+...+  +.++              +|||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            35678999999999999877888888876  4322222456788999999986322  2222              8999


Q ss_pred             eccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------------
Q 038681          120 SVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF-----------------------------------  164 (332)
Q Consensus       120 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----------------------------------  164 (332)
                      |++|.++.+...       ..++......++.+++..|..||+..                                   
T Consensus       122 ~v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          122 FVSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             CCCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             ecCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            999988754221       24778888999999999999999510                                   


Q ss_pred             --------------------CCCeeecCCCCCCeeeCCCCC--eEEeecCCccc
Q 038681          165 --------------------SRPIVYRDMKPTNILFNEQSD--AKLFDFSLSLS  196 (332)
Q Consensus       165 --------------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~  196 (332)
                                          ...++|+|++|.||+++.++.  +.|+||+.+..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                257999999999999987753  58999998864


No 258
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.19  E-value=2.2e-11  Score=107.68  Aligned_cols=172  Identities=13%  Similarity=0.082  Sum_probs=116.1

Q ss_pred             CCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-CCC-----cce-----------EEEEEec
Q 038681           59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMS-HKH-----IIK-----------LIVFESV  121 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~n-----Iv~-----------~lv~e~~  121 (332)
                      .+.++.|.+..||+..   ..+++|.....   .....+.+|..++..+. +..     ++.           ++||+++
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999864   56888886533   33567889999998883 322     221           2789999


Q ss_pred             cCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------
Q 038681          122 QIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVG--------------------------------------  163 (332)
Q Consensus       122 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------------  163 (332)
                      +|.+|.+....       .++..+...++.+++..|..||+.                                      
T Consensus        99 ~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           99 KGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             CCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             CCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            99888754332       367777788888888888888841                                      


Q ss_pred             -----------------CCCCeeecCCCCCCeeeCC--CCCeEEeecCCccccCCCCceeeccccccCCCc---cccccc
Q 038681          164 -----------------FSRPIVYRDMKPTNILFNE--QSDAKLFDFSLSLSIPDGETHIELDSVVGTTGF---IAPENF  221 (332)
Q Consensus       164 -----------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y---~aPE~~  221 (332)
                                       ....++|+|++|.||+++.  .+.+.|+||+.+.........      .....+   ..|+..
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl------~~~~~~~~~~~~~~~  245 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF------ISLMEDDEEYGMEFV  245 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH------HTTCCTTTSCCHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH------HHHHhhccccCHHHH
Confidence                             0135899999999999988  456789999988654321110      001111   223221


Q ss_pred             C---C------------CCChhhhHHHHHHHHHHHHhCCccCC
Q 038681          222 T---T------------LINEQCDVYGFGAFLFELLTAQEVSD  249 (332)
Q Consensus       222 ~---~------------~~~~~sDiwSlG~~l~elltg~~p~~  249 (332)
                      .   .            ......+.|++|.++|.+.+|..+|.
T Consensus       246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            1   0            11223689999999999999987763


No 259
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.18  E-value=2e-11  Score=105.01  Aligned_cols=126  Identities=12%  Similarity=0.009  Sum_probs=87.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCc-ce-E-----------EEE
Q 038681           53 TNNYDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHI-IK-L-----------IVF  118 (332)
Q Consensus        53 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~-~-----------lv~  118 (332)
                      ..+|.+....+.|..+.||++.. +|..+++|......    ...+.+|+.++..+.+.++ |. +           +||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence            34455443334666799999987 57789999976542    2456789999999865444 32 2           899


Q ss_pred             EeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC----------------------------------
Q 038681          119 ESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF----------------------------------  164 (332)
Q Consensus       119 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------  164 (332)
                      ||++|.+|.  ..        ..+   ...++.+++..|..||+..                                  
T Consensus        95 e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (264)
T 1nd4_A           95 GEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE  161 (264)
T ss_dssp             ECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred             EecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence            999998884  21        111   1256677777788887310                                  


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          165 ---------------------SRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       165 ---------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                                           ...++|+|++|.||+++.++.+.|+|||.+.
T Consensus       162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                 1129999999999999876666799999873


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.96  E-value=4.7e-09  Score=93.36  Aligned_cols=131  Identities=11%  Similarity=0.027  Sum_probs=96.5

Q ss_pred             CCCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC-------CCcceE----EEEEeccC
Q 038681           55 NYDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSH-------KHIIKL----IVFESVQI  123 (332)
Q Consensus        55 ~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-------~nIv~~----lv~e~~~~  123 (332)
                      .....+.++.|..+.||+.   +..+++|.....   .....+.+|..++..+.+       |.++..    +||||++|
T Consensus        38 ~i~~v~~l~~G~~n~vy~v---g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~G  111 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC---NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKG  111 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE---TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCCC
T ss_pred             ceEEEEeCCCCCCceEEEE---CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecCC
Confidence            4556778999999999998   777888876432   224568899999999876       333322    89999999


Q ss_pred             CChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 038681          124 GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGF---------------------------------------  164 (332)
Q Consensus       124 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------  164 (332)
                      .++.....       ..++..+...++.+++..|..||+..                                       
T Consensus       112 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (320)
T 3r70_A          112 ERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE  184 (320)
T ss_dssp             BCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred             cccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence            98864332       23566677777777777777777321                                       


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCCeEEeecCCccccC
Q 038681          165 ---------------------SRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIP  198 (332)
Q Consensus       165 ---------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  198 (332)
                                           ...++|+|++|.||+++.++.+.|+||+.+....
T Consensus       185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~  239 (320)
T 3r70_A          185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD  239 (320)
T ss_dssp             HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred             chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence                                 1235999999999999986667999999986543


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.54  E-value=5.3e-07  Score=79.47  Aligned_cols=125  Identities=14%  Similarity=0.084  Sum_probs=83.6

Q ss_pred             CCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCC------Ccc---------eEEEEEeccC
Q 038681           59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSHK------HII---------KLIVFESVQI  123 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv---------~~lv~e~~~~  123 (332)
                      ...++.|....||+.   +..+++|....   ......+.+|..+|..+.+.      .++         .++||||++|
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            345788888899988   67788888532   23356789999999999642      222         2389999999


Q ss_pred             CChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhc----------------------------------------
Q 038681          124 GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVG----------------------------------------  163 (332)
Q Consensus       124 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------  163 (332)
                      .+|.+....       .++..+...++.+++..|..||+.                                        
T Consensus        98 ~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~  170 (306)
T 3tdw_A           98 QILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD  170 (306)
T ss_dssp             EECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred             eECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence            888763211       133333444444444444444420                                        


Q ss_pred             -----------------CCCCeeecCCCCCCeeeCC---CCCe-EEeecCCccc
Q 038681          164 -----------------FSRPIVYRDMKPTNILFNE---QSDA-KLFDFSLSLS  196 (332)
Q Consensus       164 -----------------~~~~ivH~Dlkp~Nill~~---~~~~-kl~Dfg~a~~  196 (332)
                                       ....++|+|++|.||+++.   ++.+ .|+||+.+..
T Consensus       171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                             1446799999999999987   4565 7999998754


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41  E-value=1e-06  Score=76.95  Aligned_cols=68  Identities=6%  Similarity=-0.062  Sum_probs=52.1

Q ss_pred             CCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCC---cceE-------EEEEeccCCCh
Q 038681           58 EQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSHKH---IIKL-------IVFESVQIGTL  126 (332)
Q Consensus        58 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n---Iv~~-------lv~e~~~~g~L  126 (332)
                      ..+.|+.|.++.||++.. +|+.+++|+..... ......+..|+..|+.+.+.+   +.++       +||||++++++
T Consensus        19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~~~lvme~l~g~~~   97 (288)
T 3d1u_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERPP   97 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCCC
T ss_pred             ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEecCcEEEEEecccCCC
Confidence            356799999999999988 68889999965432 212356889999999997652   4443       89999998874


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.28  E-value=1.9e-06  Score=77.76  Aligned_cols=66  Identities=9%  Similarity=-0.047  Sum_probs=49.8

Q ss_pred             CCCCCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC-----CCcce---------EEEEEec
Q 038681           56 YDEQNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSH-----KHIIK---------LIVFESV  121 (332)
Q Consensus        56 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-----~nIv~---------~lv~e~~  121 (332)
                      ....+.++.|....+|+....+..+++|.....      ..+..|..++..+..     |.++.         ++||||+
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l  116 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA  116 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEETTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred             CceEEECCCCCcceEEEEEECCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence            334567889999999999888999999988543      247888889888853     44542         3899999


Q ss_pred             cCCChH
Q 038681          122 QIGTLA  127 (332)
Q Consensus       122 ~~g~L~  127 (332)
                      +|.++.
T Consensus       117 ~G~~l~  122 (362)
T 3ovc_A          117 QGVTLQ  122 (362)
T ss_dssp             CSEETT
T ss_pred             CCCCcc
Confidence            986653


No 264
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25  E-value=7e-06  Score=70.62  Aligned_cols=132  Identities=11%  Similarity=0.048  Sum_probs=87.1

Q ss_pred             HHHhcCCCCCCccccCCCc-eEEEEEe--CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc----CCCcceE-------
Q 038681           50 RIATNNYDEQNIVLEDPFR-KLYKGFW--QKRSISLMKYNGNRNQHALEWCINHIVYASRMS----HKHIIKL-------  115 (332)
Q Consensus        50 ~~~~~~y~~~~~lg~G~~g-~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----H~nIv~~-------  115 (332)
                      .....+|+. ..+..|..| .||+...  .+..+++|.....    ....+.+|...|+.+.    -|.++.+       
T Consensus        21 ~~~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~   95 (272)
T 4gkh_A           21 DADLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDA   95 (272)
T ss_dssp             HHHHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             hccccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeE
Confidence            333444543 234455555 6998876  4567888886543    2456788999998874    2444433       


Q ss_pred             -EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhc-------------------------------
Q 038681          116 -IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVG-------------------------------  163 (332)
Q Consensus       116 -lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------  163 (332)
                       +|||+++|.++.+.....         ......+..+++..|.-||..                               
T Consensus        96 ~lvme~l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (272)
T 4gkh_A           96 WLLTTAIPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD  166 (272)
T ss_dssp             EEEEECCCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGG
T ss_pred             EEEEEeeCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhh
Confidence             899999998887765432         112234556666666666610                               


Q ss_pred             ------------------------CCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          164 ------------------------FSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       164 ------------------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                                              ....++|+|+.|.||+++.++.+-|+||+.+.
T Consensus       167 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          167 FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             CCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                                    01248999999999999987766799998873


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.18  E-value=8.5e-06  Score=74.35  Aligned_cols=66  Identities=8%  Similarity=0.092  Sum_probs=43.8

Q ss_pred             CCccccCCCceEEEEEe--CCeeEEEEEEcCCCC------hhhHHHHHHHHHHHHhhcC--CCcc-eE---------EEE
Q 038681           59 QNIVLEDPFRKLYKGFW--QKRSISLMKYNGNRN------QHALEWCINHIVYASRMSH--KHII-KL---------IVF  118 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~H--~nIv-~~---------lv~  118 (332)
                      .+.||.|.++.||++..  .++.+++|.......      ....+++..|..++..+..  |..+ ++         +||
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvm  114 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVM  114 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEE
Confidence            45789999999999975  568899998653211      1123456789999887742  3322 22         899


Q ss_pred             EeccCC
Q 038681          119 ESVQIG  124 (332)
Q Consensus       119 e~~~~g  124 (332)
                      |++++.
T Consensus       115 E~l~g~  120 (397)
T 2olc_A          115 EDLSHL  120 (397)
T ss_dssp             CCCTTS
T ss_pred             EeCCCc
Confidence            999764


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.18  E-value=2.9e-05  Score=68.92  Aligned_cols=131  Identities=11%  Similarity=0.075  Sum_probs=75.6

Q ss_pred             CccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhh-----cCCCcce--------------EEEEEe
Q 038681           60 NIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRM-----SHKHIIK--------------LIVFES  120 (332)
Q Consensus        60 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~--------------~lv~e~  120 (332)
                      ..|+.|..+.||+....+..+++|.....     ...+..|..++..|     ..|.++.              +++|+|
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            34566778999999886667999998763     12334455555544     2466553              289999


Q ss_pred             ccCCChH-----------HH---Hhhhhccc--c-------cCCCHHH-------------------------------H
Q 038681          121 VQIGTLA-----------DR---IHHHCEQH--F-------EALSLTD-------------------------------R  146 (332)
Q Consensus       121 ~~~g~L~-----------~~---l~~~~~~~--~-------~~l~~~~-------------------------------~  146 (332)
                      ++|.++.           ..   ++......  .       ....|..                               .
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9986542           11   11111100  0       0011211                               0


Q ss_pred             HHHHHHHHHHHHHhhh----------cCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          147 LKVAMDIAHAVAYLHV----------GFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       147 ~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      ..+...+..++.+|+.          .....++|+|++|.||+++.++.+.|+||+.+.
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            1111223445666652          015789999999999999888889999998763


No 267
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.99  E-value=0.00017  Score=59.33  Aligned_cols=100  Identities=11%  Similarity=0.023  Sum_probs=66.8

Q ss_pred             CChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCce
Q 038681          124 GTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETH  203 (332)
Q Consensus       124 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  203 (332)
                      -+|.+.|....    .++++.+++.++.|.+.+|.-+-.  ...-..+=+-|..|++..+|+|.+.+ +.+.        
T Consensus        33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------   97 (229)
T 2yle_A           33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------   97 (229)
T ss_dssp             EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred             ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc--------
Confidence            47899998763    689999999999999999887621  11111223446889999999888764 1110        


Q ss_pred             eeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhC
Q 038681          204 IELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTA  244 (332)
Q Consensus       204 ~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg  244 (332)
                            .....+.|||......+.+.=|||||+++|.-+-=
T Consensus        98 ------~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A           98 ------AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             ---------------CCSSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred             ------ccccCCCChhhccccchHHHHHHHHHHHHHHHhhc
Confidence                  12334668888765678899999999999998763


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.87  E-value=3.7e-05  Score=66.84  Aligned_cols=70  Identities=6%  Similarity=-0.083  Sum_probs=50.5

Q ss_pred             CCCCCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC------CCcceE----EEEEeccCC
Q 038681           56 YDEQNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSH------KHIIKL----IVFESVQIG  124 (332)
Q Consensus        56 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~~----lv~e~~~~g  124 (332)
                      ......+|.|..+.||+.+. +|+.+.+|+........ ...+..|...|+.|.-      |.++..    +||||++++
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~-~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~   95 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL-DGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDER   95 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC-TTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch-hhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeeccc
Confidence            44567789999999999998 78999999876543221 3457789999988842      333322    899999876


Q ss_pred             Ch
Q 038681          125 TL  126 (332)
Q Consensus       125 ~L  126 (332)
                      ..
T Consensus        96 ~~   97 (288)
T 3f7w_A           96 PP   97 (288)
T ss_dssp             CC
T ss_pred             CC
Confidence            43


No 269
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.81  E-value=8.2e-05  Score=66.65  Aligned_cols=68  Identities=3%  Similarity=-0.166  Sum_probs=44.0

Q ss_pred             Ccc-ccCCCceEEEEEeC--------CeeEEEEEEcCCCC--hhhHHHHHHHHHHHHhhc------CCCcce--------
Q 038681           60 NIV-LEDPFRKLYKGFWQ--------KRSISLMKYNGNRN--QHALEWCINHIVYASRMS------HKHIIK--------  114 (332)
Q Consensus        60 ~~l-g~G~~g~Vy~~~~~--------~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~------H~nIv~--------  114 (332)
                      +.| +.|....+|+....        +..+++|.......  ......+.+|+.++..+.      -|.++.        
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            567 78888999998764        67788887654320  000134567887777663      233332        


Q ss_pred             ---EEEEEeccCCChH
Q 038681          115 ---LIVFESVQIGTLA  127 (332)
Q Consensus       115 ---~lv~e~~~~g~L~  127 (332)
                         ++||||++|.++.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence               2899999987654


No 270
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.70  E-value=0.00028  Score=64.81  Aligned_cols=76  Identities=14%  Similarity=0.217  Sum_probs=48.4

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeEEeecCCccccCCCCceeecccccc--CCCcccccccCC----CCChhhhHHHHHHHH
Q 038681          165 SRPIVYRDMKPTNILFNEQSDAKLFDFSLSLSIPDGETHIELDSVVG--TTGFIAPENFTT----LINEQCDVYGFGAFL  238 (332)
Q Consensus       165 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~----~~~~~sDiwSlG~~l  238 (332)
                      ...++|+|++|.|||++.++ +.|+||+.+..-......   .....  ...|++|+....    .-....++.+....+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl---a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI---GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT  306 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH---HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH---HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence            78999999999999998776 999999988654321111   01111  134566654432    112345566777788


Q ss_pred             HHHHhC
Q 038681          239 FELLTA  244 (332)
Q Consensus       239 ~elltg  244 (332)
                      |+.+++
T Consensus       307 ~~~y~~  312 (420)
T 2pyw_A          307 WNLFNK  312 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877764


No 271
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.58  E-value=0.0019  Score=56.90  Aligned_cols=153  Identities=14%  Similarity=0.149  Sum_probs=88.3

Q ss_pred             CCcccccHHHHHHHhcCCCC-----CCccccCCCceEEEEEe-CCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC---
Q 038681           39 NPYRIFSAEELRIATNNYDE-----QNIVLEDPFRKLYKGFW-QKRSISLMKYNGNRNQHALEWCINHIVYASRMSH---  109 (332)
Q Consensus        39 ~~~~~~~~~el~~~~~~y~~-----~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---  109 (332)
                      .++..++.+++......|.+     ...++ |....||+... +|+.+++|.......  ....+..|..++..+..   
T Consensus         6 ~~~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~   82 (328)
T 1zyl_A            6 FTFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEV   82 (328)
T ss_dssp             CCCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCC
Confidence            56778888887766555543     23466 88889999887 566899999874321  13456678888877742   


Q ss_pred             --CCcce-------------EEEEEeccCCChH-----H------H---Hhhhhcc-c---ccCCCHHHH----------
Q 038681          110 --KHIIK-------------LIVFESVQIGTLA-----D------R---IHHHCEQ-H---FEALSLTDR----------  146 (332)
Q Consensus       110 --~nIv~-------------~lv~e~~~~g~L~-----~------~---l~~~~~~-~---~~~l~~~~~----------  146 (332)
                        |.++.             +++++|++|.++.     .      .   ++..... .   ....+....          
T Consensus        83 ~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  162 (328)
T 1zyl_A           83 PVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED  162 (328)
T ss_dssp             SBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred             eecceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence              33322             2589999875432     1      1   1111000 0   011221111          


Q ss_pred             ------------HHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          147 ------------LKVAMDIAHAVAYLHV-GFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       147 ------------~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                                  ...+..++..+.-+-. .....++|+|++|.||+++ + .+.|+||+.+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                        1112222222222210 0156789999999999998 4 899999987754


No 272
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.55  E-value=0.00028  Score=61.58  Aligned_cols=62  Identities=11%  Similarity=0.086  Sum_probs=40.4

Q ss_pred             CCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC----CCcceE------EEEEec-cCCCh
Q 038681           59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMSH----KHIIKL------IVFESV-QIGTL  126 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~~------lv~e~~-~~g~L  126 (332)
                      .+.|+.|....+|+.    ..+++|........  .-...+|+.++..+..    |.++-.      +++||+ ++.++
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCTTCEEC
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecCCCccC
Confidence            677889999999998    66888887654211  1112467877777642    444433      899999 65444


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.51  E-value=0.0016  Score=57.16  Aligned_cols=152  Identities=16%  Similarity=0.131  Sum_probs=84.7

Q ss_pred             cccccHHHHHHHhcCCCCC-----CccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc-----CC
Q 038681           41 YRIFSAEELRIATNNYDEQ-----NIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMS-----HK  110 (332)
Q Consensus        41 ~~~~~~~el~~~~~~y~~~-----~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~  110 (332)
                      +..++.+++......|.+.     +.|+.|....+|+....+..+++|.......   .+.+..|+.++..|.     -|
T Consensus         4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP   80 (322)
T 2ppq_A            4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCP   80 (322)
T ss_dssp             -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred             cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCC
Confidence            3456777777776667652     3466788889999988656788998876322   233456777777663     24


Q ss_pred             Ccce--------------EEEEEeccCCChHH-----------H---HhhhhcccccC----CC---HHHHHH-------
Q 038681          111 HIIK--------------LIVFESVQIGTLAD-----------R---IHHHCEQHFEA----LS---LTDRLK-------  148 (332)
Q Consensus       111 nIv~--------------~lv~e~~~~g~L~~-----------~---l~~~~~~~~~~----l~---~~~~~~-------  148 (332)
                      .++.              +++++|++|.++..           .   ++........+    ..   |.....       
T Consensus        81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  160 (322)
T 2ppq_A           81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD  160 (322)
T ss_dssp             CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred             cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence            4432              27899998765311           1   11110000000    11   111000       


Q ss_pred             -----HHHHHHHHHHHhhh----cCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          149 -----VAMDIAHAVAYLHV----GFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       149 -----i~~~i~~~L~~LH~----~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                           +...+...++++..    ....+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                 00113344455542    114579999999999999877656799998763


No 274
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46  E-value=0.00037  Score=61.28  Aligned_cols=64  Identities=2%  Similarity=-0.029  Sum_probs=48.2

Q ss_pred             CCccccCCCceEEEEEeCCeeEEEEEEcCCCChhhHHHHHHHHHHHHhhc------CCCcce--------EEEEEeccCC
Q 038681           59 QNIVLEDPFRKLYKGFWQKRSISLMKYNGNRNQHALEWCINHIVYASRMS------HKHIIK--------LIVFESVQIG  124 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~--------~lv~e~~~~g  124 (332)
                      .+.|+.|....+|+....+..+++|.....    ....+..|...|+.|.      -|-++.        ++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDEVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEESSSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEECCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            456899999999999888888889887643    2566888998888873      233332        2899999987


Q ss_pred             Ch
Q 038681          125 TL  126 (332)
Q Consensus       125 ~L  126 (332)
                      ++
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            64


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.21  E-value=0.0011  Score=61.02  Aligned_cols=65  Identities=15%  Similarity=0.082  Sum_probs=44.2

Q ss_pred             CCccccCCCceEEEEEeC---------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcc-eE-------EEEEec
Q 038681           59 QNIVLEDPFRKLYKGFWQ---------KRSISLMKYNGNRNQHALEWCINHIVYASRMSHKHII-KL-------IVFESV  121 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~~-------lv~e~~  121 (332)
                      .+.|+.|....||++...         +..+++|+......   .+.+.+|..++..|...+++ ++       +|+||+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~g~v~e~l  154 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYI  154 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCC
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCCCEEEEEe
Confidence            456788888999999873         46788888844221   24456899999888533332 22       799999


Q ss_pred             cCCCh
Q 038681          122 QIGTL  126 (332)
Q Consensus       122 ~~g~L  126 (332)
                      +|.+|
T Consensus       155 ~G~~l  159 (429)
T 1nw1_A          155 PSRPL  159 (429)
T ss_dssp             CEEEC
T ss_pred             CCccc
Confidence            86443


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.10  E-value=0.0039  Score=55.01  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=28.3

Q ss_pred             CCCeeecCCCCCCeeeCCC----CCeEEeecCCcccc
Q 038681          165 SRPIVYRDMKPTNILFNEQ----SDAKLFDFSLSLSI  197 (332)
Q Consensus       165 ~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~a~~~  197 (332)
                      ...++|+|+.+.||+++.+    +.+.|+||+.+..-
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            5689999999999999874    67899999988554


No 277
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.06  E-value=0.0014  Score=59.00  Aligned_cols=66  Identities=17%  Similarity=0.118  Sum_probs=39.2

Q ss_pred             CCccccCCCceEEEEEeCC----------eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcc-eE-------EEEEe
Q 038681           59 QNIVLEDPFRKLYKGFWQK----------RSISLMKYNGNRNQHALEWCINHIVYASRMSHKHII-KL-------IVFES  120 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~~----------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~~-------lv~e~  120 (332)
                      ...|+.|....+|+....+          ..+++|+...... . ......|..++..+...+++ ++       +|+||
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~~~~v~e~  115 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-E-LYNTISEFEVYKTMSKYKIAPQLLNTFNGGRIEEW  115 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-G-TSCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEEC
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-c-eecHHHHHHHHHHHHhcCCCCceEEecCCcEEEEE
Confidence            3467788888999998743          6777777654321 1 11235788888887432333 22       89999


Q ss_pred             ccCCCh
Q 038681          121 VQIGTL  126 (332)
Q Consensus       121 ~~~g~L  126 (332)
                      ++|.++
T Consensus       116 i~G~~l  121 (369)
T 3c5i_A          116 LYGDPL  121 (369)
T ss_dssp             CCSEEC
T ss_pred             ecCCcC
Confidence            987543


No 278
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99  E-value=0.002  Score=58.12  Aligned_cols=134  Identities=15%  Similarity=0.142  Sum_probs=75.7

Q ss_pred             CccccCCCceEEEEEeC---------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC----CCcceE----EEEEecc
Q 038681           60 NIVLEDPFRKLYKGFWQ---------KRSISLMKYNGNRNQHALEWCINHIVYASRMSH----KHIIKL----IVFESVQ  122 (332)
Q Consensus        60 ~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~~----lv~e~~~  122 (332)
                      +.|..|-...+|++...         +..+++++.....  .......+|..+++.|.-    |-++-.    +|+||++
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g~v~e~i~  133 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIP  133 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCS
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccEEEEec
Confidence            45777888899999873         3678888753321  124556689999988842    333333    8999999


Q ss_pred             CCChHH--------------HHhh-hh-cccc-cCC--CHHHHHHHHHHHHH-------------------HHHHhhh--
Q 038681          123 IGTLAD--------------RIHH-HC-EQHF-EAL--SLTDRLKVAMDIAH-------------------AVAYLHV--  162 (332)
Q Consensus       123 ~g~L~~--------------~l~~-~~-~~~~-~~l--~~~~~~~i~~~i~~-------------------~L~~LH~--  162 (332)
                      |.+|..              .+.+ +. .... ...  -+.++..+..++..                   .+..|..  
T Consensus       134 G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L  213 (379)
T 3feg_A          134 SRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLL  213 (379)
T ss_dssp             EEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHH
T ss_pred             CccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHH
Confidence            865431              1110 00 0000 111  13445555544322                   1223221  


Q ss_pred             ---cCCCCeeecCCCCCCeeeCCC----CCeEEeecCCcc
Q 038681          163 ---GFSRPIVYRDMKPTNILFNEQ----SDAKLFDFSLSL  195 (332)
Q Consensus       163 ---~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~a~  195 (332)
                         .....++|+|+.+.||+++.+    +.+.|+||..+.
T Consensus       214 ~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          214 ESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             hhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence               114579999999999999876    789999998773


No 279
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.82  E-value=0.0065  Score=56.27  Aligned_cols=65  Identities=14%  Similarity=-0.012  Sum_probs=42.4

Q ss_pred             CccccCCCceEEEEEeCC--eeEEEEEEcCCCChhhHHHHHHHHHHHHhhcCCCcce-E-------EEEEeccCCCh
Q 038681           60 NIVLEDPFRKLYKGFWQK--RSISLMKYNGNRNQHALEWCINHIVYASRMSHKHIIK-L-------IVFESVQIGTL  126 (332)
Q Consensus        60 ~~lg~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~-~-------lv~e~~~~g~L  126 (332)
                      +.|+.|-...+|++...+  ..+++|+.......- . ...+|..++..|...++++ +       +|+||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-i-dR~~E~~vl~~L~~~gl~P~ll~~~~~G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-I-NREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-S-CHHHHHHHHHHHTTSSSBCCEEEEETTEEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-c-CHHHHHHHHHHHHhcCCCCCEEEEeCCeEEEEeeCCccC
Confidence            457788888999999855  888888875432111 1 1258999999886544432 2       79999987544


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.15  E-value=0.015  Score=51.46  Aligned_cols=32  Identities=13%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             CCCeeecCCCCCCeeeCCCCCeEEeecCCccc
Q 038681          165 SRPIVYRDMKPTNILFNEQSDAKLFDFSLSLS  196 (332)
Q Consensus       165 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  196 (332)
                      ...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45799999999999999888899999987754


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.62  E-value=0.028  Score=50.91  Aligned_cols=30  Identities=30%  Similarity=0.335  Sum_probs=26.5

Q ss_pred             CCCeeecCCCCCCeeeCCC------CCeEEeecCCc
Q 038681          165 SRPIVYRDMKPTNILFNEQ------SDAKLFDFSLS  194 (332)
Q Consensus       165 ~~~ivH~Dlkp~Nill~~~------~~~kl~Dfg~a  194 (332)
                      ...++|+|+.+.||+++.+      +.+.|+||..|
T Consensus       243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a  278 (401)
T 3f2s_A          243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS  278 (401)
T ss_dssp             CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred             CeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence            4579999999999999876      78999999776


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.82  E-value=0.12  Score=47.09  Aligned_cols=66  Identities=12%  Similarity=-0.002  Sum_probs=43.0

Q ss_pred             CCccccCCCceEEEEEeC---------CeeEEEEEEcCCCChhhHHHHHHHHHHHHhhcC----CCcceE----EEEEec
Q 038681           59 QNIVLEDPFRKLYKGFWQ---------KRSISLMKYNGNRNQHALEWCINHIVYASRMSH----KHIIKL----IVFESV  121 (332)
Q Consensus        59 ~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~~----lv~e~~  121 (332)
                      .+.+..|-...+|+....         +..+++++..... .. .-...+|..+++.+.-    |-++-.    +|+||+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~~~~I~efI  152 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GK-FYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFI  152 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--C-CCCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECC
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-ch-hcCHHHHHHHHHHHHhcCCCCCEEEEcCCCEEEEEe
Confidence            345677888899999884         5778888864432 11 1123578888888753    333322    899999


Q ss_pred             cCCCh
Q 038681          122 QIGTL  126 (332)
Q Consensus       122 ~~g~L  126 (332)
                      +|.+|
T Consensus       153 ~G~~l  157 (424)
T 3mes_A          153 DGEPL  157 (424)
T ss_dssp             CSEEC
T ss_pred             CCccC
Confidence            98653


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.29  E-value=0.019  Score=52.13  Aligned_cols=29  Identities=31%  Similarity=0.414  Sum_probs=24.4

Q ss_pred             CeeecCCCCCCeee------CCCCCeEEeecCCcc
Q 038681          167 PIVYRDMKPTNILF------NEQSDAKLFDFSLSL  195 (332)
Q Consensus       167 ~ivH~Dlkp~Nill------~~~~~~kl~Dfg~a~  195 (332)
                      .++|+|+.+.|||+      +.+..+.++||-.|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46799999999999      456779999998774


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.61  E-value=0.9  Score=37.07  Aligned_cols=108  Identities=9%  Similarity=0.058  Sum_probs=74.5

Q ss_pred             cCCCcceE--------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 038681          108 SHKHIIKL--------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVAYLHVGFSRPIVYRDMKPTNIL  179 (332)
Q Consensus       108 ~H~nIv~~--------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~Nil  179 (332)
                      .||+.+..        +++.|-...+...|-.-      ...+....++++..|+.-..+++     .=+|--|.|+||+
T Consensus        43 ~~~~Fl~~~I~e~eD~v~~~y~~~~~~~~f~~i------k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~  111 (215)
T 4ann_A           43 HSPYFIDAELTELRDSFQIHYDINDNHTPFDNI------KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF  111 (215)
T ss_dssp             CCTTBCCEEEEECSSEEEEEECCCTTSEEGGGG------GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred             cCCcccceEEEEcccEEEEEEEcCcccCCHHHH------HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence            58888865        66666554444444332      35889999999999998886665     3478889999999


Q ss_pred             eCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCCCCChhhhHHHHHHHHHHHHhCCccCC
Q 038681          180 FNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVYGFGAFLFELLTAQEVSD  249 (332)
Q Consensus       180 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiwSlG~~l~elltg~~p~~  249 (332)
                      ++.++.+++.-.|+-..+.                   |.    ..+...=.-.+=|++..+++++..|.
T Consensus       112 f~~~~~p~i~~RGik~~l~-------------------P~----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          112 FTRDGLPIAKTRGLQNVVD-------------------PL----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             ECTTSCEEESCCEETTTBS-------------------CC----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             EcCCCCEEEEEccCccCCC-------------------CC----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999998777643321                   11    11222223366788888999888775


No 285
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=88.15  E-value=0.059  Score=49.89  Aligned_cols=56  Identities=7%  Similarity=-0.053  Sum_probs=14.4

Q ss_pred             CCCCccccCCCceEEEEEeC--CeeEEE------EEEcCCC-ChhhHHHHHHHHHHHHhhcCCCcceE
Q 038681           57 DEQNIVLEDPFRKLYKGFWQ--KRSISL------MKYNGNR-NQHALEWCINHIVYASRMSHKHIIKL  115 (332)
Q Consensus        57 ~~~~~lg~G~~g~Vy~~~~~--~~~vav------K~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~  115 (332)
                      .+.+.||   ||.||+|.+.  ..+||+      |...... ..+....+.+|..++..++|||+++.
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~  209 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKI  209 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBC
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCC
Confidence            3456676   9999999994  357888      6665432 23334568889999999999999986


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.60  E-value=1.5  Score=35.84  Aligned_cols=106  Identities=13%  Similarity=0.145  Sum_probs=70.3

Q ss_pred             cCCCcceE--------EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeecCCCCCCe
Q 038681          108 SHKHIIKL--------IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDIAHAVA-YLHVGFSRPIVYRDMKPTNI  178 (332)
Q Consensus       108 ~H~nIv~~--------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~Ni  178 (332)
                      .||++ ..        +.+.|-.......+-.-      ..++..+.++++..|+.-.. +++     .-+|--|.|+||
T Consensus        48 ~~~~f-~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL  115 (219)
T 4ano_A           48 VDPCI-VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL  115 (219)
T ss_dssp             SCSSS-EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred             cCCCC-CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence            57888 55        55555443233333221      24788999999999888777 555     457788999999


Q ss_pred             eeCCCCCeEEeecCCccccCCCCceeeccccccCCCcccccccCCCCChhhhHH-HHHHHHHHHHhCCccCC
Q 038681          179 LFNEQSDAKLFDFSLSLSIPDGETHIELDSVVGTTGFIAPENFTTLINEQCDVY-GFGAFLFELLTAQEVSD  249 (332)
Q Consensus       179 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDiw-SlG~~l~elltg~~p~~  249 (332)
                      +++.++.+++.-.|+-..+                   +|.-    .+ ..|.| .+=|++..++.++..|.
T Consensus       116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e----~~-ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          116 MFNRALEPFFLHVGVKESL-------------------PPDE----WD-DERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             EECTTCCEEESCCEETTTB-------------------SSCS----CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             EEeCCCcEEEEEcCCcccC-------------------CCCC----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999999887764322                   2221    11 22333 66778888888877664


No 287
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=60.52  E-value=39  Score=29.40  Aligned_cols=74  Identities=19%  Similarity=0.175  Sum_probs=40.2

Q ss_pred             EEEEeccCCChHHHHhhhhcccccCCCHHHHHHHHHHH--HHHHHHhhhcCCC-Ce-eecCCCCCCeeeCCCCC-eEEee
Q 038681          116 IVFESVQIGTLADRIHHHCEQHFEALSLTDRLKVAMDI--AHAVAYLHVGFSR-PI-VYRDMKPTNILFNEQSD-AKLFD  190 (332)
Q Consensus       116 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i--~~~L~~LH~~~~~-~i-vH~Dlkp~Nill~~~~~-~kl~D  190 (332)
                      ++|+|.+|..|...-.....   ..+...    .+.++  +-+++.+....++ +. .+.--.|.|||++.++. +.++|
T Consensus       159 l~meyv~G~~L~e~~~~~~~---~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID  231 (342)
T 1cja_A          159 LLMELVRGITLNKLTTTSAP---EVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID  231 (342)
T ss_dssp             EEEECCCEEESTTCCSSSHH---HHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred             ehhhhcCCCccccchhhhhh---hhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence            89999987666543221100   112222    22332  3455555532222 22 12235789999976554 88899


Q ss_pred             cCCccc
Q 038681          191 FSLSLS  196 (332)
Q Consensus       191 fg~a~~  196 (332)
                      -+.+..
T Consensus       232 hn~af~  237 (342)
T 1cja_A          232 SKIIPL  237 (342)
T ss_dssp             CCCCCC
T ss_pred             CCcccc
Confidence            998854


No 288
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=39.20  E-value=18  Score=34.93  Aligned_cols=72  Identities=19%  Similarity=0.171  Sum_probs=43.1

Q ss_pred             EEEeccCCChHHHHhh----------hhcccccCC--CHHHHHHHHHHHH--HHHHHhhhcCCCCeeecCCCCCCeeeCC
Q 038681          117 VFESVQIGTLADRIHH----------HCEQHFEAL--SLTDRLKVAMDIA--HAVAYLHVGFSRPIVYRDMKPTNILFNE  182 (332)
Q Consensus       117 v~e~~~~g~L~~~l~~----------~~~~~~~~l--~~~~~~~i~~~i~--~~L~~LH~~~~~~ivH~Dlkp~Nill~~  182 (332)
                      +.|++++-+|.+++..          ........+  ....+..++.++|  .-+.|+=   .-    +|=.++||||+.
T Consensus       490 LIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~  562 (696)
T 2x6h_A          490 FLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTT  562 (696)
T ss_dssp             EEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECT
T ss_pred             eeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeC
Confidence            5677776566655543          211111111  1233444555543  2345554   22    588899999999


Q ss_pred             CCCeEEeecCCcc
Q 038681          183 QSDAKLFDFSLSL  195 (332)
Q Consensus       183 ~~~~kl~Dfg~a~  195 (332)
                      .|.+.=+|||.+.
T Consensus       563 tG~v~HIDFG~~f  575 (696)
T 2x6h_A          563 NGKLFHIDFGYIL  575 (696)
T ss_dssp             TSCEEECCCCSCT
T ss_pred             CCCEEEEeehhhh
Confidence            9999999999874


No 289
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=30.42  E-value=38  Score=23.89  Aligned_cols=32  Identities=3%  Similarity=0.276  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038681          293 EQQLQAFKQLTLQCMDFSPEDRPTMVDVAKQL  324 (332)
Q Consensus       293 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L  324 (332)
                      ++....+++.|..+|..+|.+..|+.++.+.|
T Consensus        46 pe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l   77 (104)
T 2fq3_A           46 PEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV   77 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence            46678899999999999999999999998765


No 290
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=27.20  E-value=50  Score=24.97  Aligned_cols=25  Identities=12%  Similarity=0.256  Sum_probs=21.1

Q ss_pred             ccCCCCCCCCHHHHHHHHHHHHHhh
Q 038681          307 MDFSPEDRPTMVDVAKQLRQMYRSC  331 (332)
Q Consensus       307 l~~dP~~RPs~~evl~~L~~l~~~~  331 (332)
                      ...+|..||+++++++.|++|..++
T Consensus       138 ~~~~~~~~~~~~eil~~l~~l~~e~  162 (164)
T 4gqc_A          138 VTDNPLNEPDYDEVVREANKIAGEL  162 (164)
T ss_dssp             ECSCTTCCCCHHHHHHHHHHHHHHC
T ss_pred             EeCCCCCCCCHHHHHHHHHHHhccc
Confidence            3567899999999999999987654


No 291
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=26.79  E-value=36  Score=34.73  Aligned_cols=25  Identities=24%  Similarity=0.322  Sum_probs=22.8

Q ss_pred             cCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          171 RDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       171 ~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +|=.++||||+..|.+.=+|||.+-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            5888999999999999999999874


No 292
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.75  E-value=42  Score=31.87  Aligned_cols=46  Identities=17%  Similarity=0.172  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHH--HHHHhhhcCCCCeeecCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          143 LTDRLKVAMDIAH--AVAYLHVGFSRPIVYRDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       143 ~~~~~~i~~~i~~--~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +.....++.++|.  -+.|+=   .-    +|=.++|||++.+|.+.=+|||...
T Consensus       454 ~~a~~nF~~S~A~ySvv~YIL---Gi----gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYIL---GV----GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhheee---ec----cCCCCcceeEcCCCCEeeeehHHhh
Confidence            3444555555443  355654   33    4777999999999999999999873


No 293
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=24.06  E-value=31  Score=34.60  Aligned_cols=25  Identities=28%  Similarity=0.348  Sum_probs=22.6

Q ss_pred             cCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          171 RDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       171 ~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +|=.++||||+.+|.+.=+|||.+-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            5888999999999999999999874


No 294
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=23.00  E-value=35  Score=34.40  Aligned_cols=25  Identities=28%  Similarity=0.367  Sum_probs=22.3

Q ss_pred             cCCCCCCeeeCCCCCeEEeecCCcc
Q 038681          171 RDMKPTNILFNEQSDAKLFDFSLSL  195 (332)
Q Consensus       171 ~Dlkp~Nill~~~~~~kl~Dfg~a~  195 (332)
                      +|=.++||||+..|.+.=+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            5888999999999999999999874


No 295
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.25  E-value=9.9  Score=34.97  Aligned_cols=22  Identities=14%  Similarity=-0.076  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHHHhhcCCCcceE
Q 038681           94 LEWCINHIVYASRMSHKHIIKL  115 (332)
Q Consensus        94 ~~~~~~E~~~l~~l~H~nIv~~  115 (332)
                      .+.|..|++.+.+++|+|+|++
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L  344 (487)
T 3oja_A          323 SETERLECERENQARQREIDAL  344 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccchhhH
Confidence            5679999999999999999986


Done!