Query 038682
Match_columns 382
No_of_seqs 241 out of 818
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 13:33:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038682.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038682hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2619 Fucosyltransferase [Ca 100.0 2.9E-67 6.4E-72 523.2 19.6 241 8-257 96-358 (372)
2 PF00852 Glyco_transf_10: Glyc 100.0 3.1E-64 6.8E-69 501.9 11.9 254 3-266 64-348 (349)
3 PF03016 Exostosin: Exostosin 96.5 0.013 2.8E-07 56.3 8.9 114 61-179 147-269 (302)
4 PF13524 Glyco_trans_1_2: Glyc 94.7 0.084 1.8E-06 42.1 5.8 60 157-220 9-69 (92)
5 KOG1021 Acetylglucosaminyltran 90.0 1.8 4E-05 45.5 9.7 85 91-179 289-376 (464)
6 PF00534 Glycos_transf_1: Glyc 77.7 5.3 0.00012 34.5 5.5 77 137-218 86-163 (172)
7 cd03794 GT1_wbuB_like This fam 76.8 7.2 0.00016 36.6 6.5 82 138-220 289-372 (394)
8 cd03801 GT1_YqgM_like This fam 75.2 13 0.00028 34.3 7.7 79 138-220 270-348 (374)
9 cd03808 GT1_cap1E_like This fa 74.2 9.4 0.0002 35.4 6.5 59 160-220 277-336 (359)
10 PF00159 Hormone_3: Pancreatic 68.6 5.1 0.00011 27.9 2.4 17 195-211 9-25 (36)
11 cd03814 GT1_like_2 This family 65.5 19 0.00041 33.9 6.6 125 93-221 198-340 (364)
12 cd00126 PAH Pancreatic Hormone 65.4 6.1 0.00013 27.5 2.3 17 195-211 9-25 (36)
13 cd03820 GT1_amsD_like This fam 64.5 21 0.00045 33.0 6.6 77 139-220 248-326 (348)
14 cd03799 GT1_amsK_like This is 58.1 30 0.00064 32.9 6.6 81 138-220 250-334 (355)
15 cd03825 GT1_wcfI_like This fam 57.9 31 0.00068 32.8 6.7 61 160-221 278-338 (365)
16 cd03798 GT1_wlbH_like This fam 57.9 29 0.00063 32.2 6.3 121 92-216 202-347 (377)
17 smart00309 PAH Pancreatic horm 57.5 10 0.00022 26.4 2.3 17 195-211 9-25 (36)
18 cd03809 GT1_mtfB_like This fam 57.3 24 0.00052 33.3 5.7 57 161-220 287-343 (365)
19 cd05844 GT1_like_7 Glycosyltra 55.9 36 0.00079 32.7 6.8 58 161-220 285-343 (367)
20 cd03818 GT1_ExpC_like This fam 55.8 33 0.00073 34.2 6.8 57 162-220 316-373 (396)
21 cd03823 GT1_ExpE7_like This fa 55.3 30 0.00065 32.4 6.0 124 93-220 192-336 (359)
22 cd03795 GT1_like_4 This family 53.3 33 0.00071 32.6 6.0 57 162-220 281-339 (357)
23 cd03807 GT1_WbnK_like This fam 51.8 35 0.00075 31.8 5.8 58 160-220 282-339 (365)
24 cd03822 GT1_ecORF704_like This 51.3 40 0.00088 31.8 6.2 59 159-220 282-341 (366)
25 cd03800 GT1_Sucrose_synthase T 47.5 48 0.001 32.2 6.2 57 162-220 318-375 (398)
26 PF03213 Pox_P35: Poxvirus P35 47.3 2.8 6.1E-05 42.2 -2.4 72 170-249 11-92 (325)
27 cd04962 GT1_like_5 This family 45.0 70 0.0015 30.8 6.9 57 162-220 286-343 (371)
28 cd03817 GT1_UGDG_like This fam 44.6 55 0.0012 30.6 6.0 79 138-221 273-351 (374)
29 TIGR03087 stp1 sugar transfera 44.2 64 0.0014 32.3 6.7 58 160-220 312-369 (397)
30 cd03821 GT1_Bme6_like This fam 44.0 52 0.0011 30.7 5.7 78 138-221 276-353 (375)
31 cd03812 GT1_CapH_like This fam 43.7 49 0.0011 31.6 5.6 60 161-222 281-340 (358)
32 TIGR03088 stp2 sugar transfera 42.9 67 0.0014 31.4 6.5 57 161-220 287-345 (374)
33 cd03811 GT1_WabH_like This fam 42.8 57 0.0012 29.9 5.7 78 139-220 259-339 (353)
34 cd04951 GT1_WbdM_like This fam 41.6 59 0.0013 30.9 5.8 74 139-218 258-331 (360)
35 cd03819 GT1_WavL_like This fam 41.2 70 0.0015 30.4 6.2 56 162-219 280-337 (355)
36 PF13692 Glyco_trans_1_4: Glyc 41.0 24 0.00053 29.1 2.7 73 136-213 63-135 (135)
37 TIGR03449 mycothiol_MshA UDP-N 40.5 85 0.0018 31.1 6.9 58 162-220 318-375 (405)
38 PLN02871 UDP-sulfoquinovose:DA 39.0 76 0.0016 32.8 6.5 56 162-220 347-407 (465)
39 cd04949 GT1_gtfA_like This fam 35.3 1.1E+02 0.0023 29.9 6.5 57 162-220 294-352 (372)
40 PRK15427 colanic acid biosynth 34.9 1.1E+02 0.0023 31.2 6.7 59 159-220 317-378 (406)
41 cd04946 GT1_AmsK_like This fam 33.9 99 0.0021 31.4 6.3 65 153-220 318-384 (407)
42 cd03806 GT1_ALG11_like This fa 28.9 1.1E+02 0.0024 31.3 5.7 54 162-219 340-398 (419)
43 cd03805 GT1_ALG2_like This fam 28.8 1.4E+02 0.0031 29.1 6.3 57 162-220 315-371 (392)
44 cd04955 GT1_like_6 This family 28.4 1.1E+02 0.0023 29.2 5.2 54 162-220 284-337 (363)
45 KOG1890 Phosphoinositide phosp 27.0 48 0.001 36.6 2.7 37 151-188 271-316 (949)
46 PLN02683 pyruvate dehydrogenas 25.6 4.4E+02 0.0095 26.9 9.2 100 108-211 244-350 (356)
47 cd03813 GT1_like_3 This family 25.2 1.6E+02 0.0035 30.5 6.2 57 162-220 386-449 (475)
48 PRK15484 lipopolysaccharide 1, 24.6 2.4E+02 0.0051 28.3 7.0 53 162-216 293-347 (380)
49 CHL00145 psaD photosystem I su 23.4 40 0.00086 29.9 1.0 16 335-350 79-94 (139)
50 PRK09922 UDP-D-galactose:(gluc 21.2 1.4E+02 0.003 29.4 4.5 55 161-217 272-328 (359)
51 cd03816 GT1_ALG1_like This fam 20.9 2.3E+02 0.005 28.8 6.2 57 159-220 330-391 (415)
52 TIGR02095 glgA glycogen/starch 20.5 2.2E+02 0.0048 29.4 6.0 56 163-220 382-448 (473)
53 KOG3307 Molybdopterin converti 20.4 38 0.00082 30.0 0.3 12 319-330 122-133 (150)
54 TIGR02149 glgA_Coryne glycogen 20.1 2.3E+02 0.005 27.6 5.8 57 163-220 297-359 (388)
No 1
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-67 Score=523.25 Aligned_cols=241 Identities=39% Similarity=0.600 Sum_probs=209.0
Q ss_pred ccEEEecCCCC--CCeE-Ee----------CC-CCCCCeEEEeccCCCccccccchhhhcCCCCcEEEEeeecCCCcccc
Q 038682 8 RCKFGYDDDRK--PDAS-FG----------MS-QQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGY 73 (382)
Q Consensus 8 ~C~~t~dr~~~--~DAv-f~----------l~-r~p~Q~~V~~s~Esp~~~~~~n~~~~~~~~fn~tMTyr~dSDi~~~Y 73 (382)
+|.+|.+|+.. +||| || +| |+|+|.||+++||||.+++.+... ..+.||||||||+|||+++||
T Consensus 96 ~C~iT~~rs~~~~adAvlfh~~d~~~~~~~l~~R~p~q~~i~~s~ESP~~~~~~~~~--~~~~fN~T~Tyr~dSd~~~py 173 (372)
T KOG2619|consen 96 GCRITTNRSLFDSADAVLFHHRDIPKSPLPLPGRKPGQPWIWMSMESPSNSPGLSLI--DGRLFNWTMTYRRDSDLFVPY 173 (372)
T ss_pred ceEEeCCccccCCCCEEEEeeccCCCCcccccCCCCCCceEEEeccCCCCCcccccc--ccccccceEEEeccCCCCCcc
Confidence 79999999974 5887 43 34 899999999999999987765443 223799999999999997776
Q ss_pred c--cccc-ccccCCCCC--CcccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCC---CCCCchhHHhhhccce
Q 038682 74 F--SWAE-YDIMAPVQP--KTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHR---NRDGRVEKVETLKRYK 145 (382)
Q Consensus 74 ~--s~~~-~~~~~p~~~--K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~---n~~~~~~k~e~l~~YK 145 (382)
| .+.+ +..+.|..+ ..|.++++|++|||++++.|.+++++|+++ ++||+||+|++ +..+..++++++++||
T Consensus 174 gy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~~~~~~~~~~~~~~s~YK 252 (372)
T KOG2619|consen 174 GYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKNANRDPSDCLLETLSHYK 252 (372)
T ss_pred ceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-CceeeccccccccccCCCCCcceeecccce
Confidence 5 4544 666666653 567789999999999999999999999996 99999999997 4455567889999999
Q ss_pred eEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhhhhh
Q 038682 146 FSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKY 225 (382)
Q Consensus 146 FyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~Wr~ 225 (382)
||||||||+|+||||||||+||.+|+||||+|++||++++| |+||||++||+||+|||+||++|++|+++|++||+||.
T Consensus 253 FyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~fvP-~~SfI~vdDF~s~~ela~ylk~L~~n~~~Y~~Yf~WR~ 331 (372)
T KOG2619|consen 253 FYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENFVP-PDSFIHVDDFQSPQELAAYLKKLDKNPAAYLSYFEWRK 331 (372)
T ss_pred EEEEecccCCcccccHHHHhhhhcCcccEEECCccccccCC-CcceEehhhcCCHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999995
Q ss_pred cCCCchHHHHHhhccCChhhHHHHHHHHhhhH
Q 038682 226 EGPSDSFKALVDMAAVHSSCRLCIYLATKIQE 257 (382)
Q Consensus 226 ~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~ 257 (382)
. |+.....+..+++|+||.+|++..|+
T Consensus 332 ~-----~~~~~~~~~~~~~CrlC~~l~~~~r~ 358 (372)
T KOG2619|consen 332 D-----YKVRLTSAWDSGFCRLCEKLQREPRN 358 (372)
T ss_pred h-----hcccccccccchhhHHHHHHHhcccc
Confidence 4 44445555678999999999987764
No 2
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=100.00 E-value=3.1e-64 Score=501.92 Aligned_cols=254 Identities=33% Similarity=0.521 Sum_probs=100.6
Q ss_pred CcCCc-----ccEEEecCCC--CCCeEEe-----------C---CCCCCCeEEEeccCCCccccccchhhhcCCCCcEEE
Q 038682 3 RVCDV-----RCKFGYDDDR--KPDASFG-----------M---SQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVM 61 (382)
Q Consensus 3 ~~C~v-----~C~~t~dr~~--~~DAvf~-----------l---~r~p~Q~~V~~s~Esp~~~~~~n~~~~~~~~fn~tM 61 (382)
..|+. +|++|+||+. .+|||++ + +|+++|.|||++||||.++. ... ...+.|||||
T Consensus 64 ~~C~~~~~~~~C~lT~dr~~~~~aDAVVFh~~~~~~~~~~lP~~~R~~~Q~wV~~s~ESP~~~~--~~~-~~~~~FN~TM 140 (349)
T PF00852_consen 64 SKCPDNFGIGNCELTNDRSLLSEADAVVFHGRDFSESLSDLPKKRRPPHQRWVFWSMESPSNTP--RLK-DFDNFFNWTM 140 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc-cccccccccc
Confidence 46754 6999999986 5699843 1 16789999999999998772 111 2345899999
Q ss_pred EeeecCCCccccccccccccc-----CCCCCCcccceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCCCC-CCch
Q 038682 62 TTSLSSDVPVGYFSWAEYDIM-----APVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNR-DGRV 135 (382)
Q Consensus 62 Tyr~dSDi~~~Y~s~~~~~~~-----~p~~~K~k~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~n~-~~~~ 135 (382)
|||+||||++||+........ .+...+.|+++++|++|||++.+.|.+|+++|+++ ++||+||+|+++. ....
T Consensus 141 TYr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~~~~~~~ 219 (349)
T PF00852_consen 141 TYRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNNNPCPRD 219 (349)
T ss_dssp --------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT--SSS--S
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCCCCcccc
Confidence 999999999999865432211 11123456689999999999988899999999997 9999999995443 3334
Q ss_pred hHHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEEC--CCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcC
Q 038682 136 EKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVG--APNIQDFAPSPKSILHIREREDVKSVAKTMKYLAEN 213 (382)
Q Consensus 136 ~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G--~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n 213 (382)
++.+.+++||||||||||.|+||||||||+||.+|+||||+| ++||++++| |+||||++||+|+++||+||++|++|
T Consensus 220 ~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P-~~SfI~~~df~s~~~La~yl~~l~~n 298 (349)
T PF00852_consen 220 CKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAP-PNSFIHVDDFKSPKELADYLKYLDKN 298 (349)
T ss_dssp -HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS--GGGSEEGGGSSSHHHHHHHHHHHHT-
T ss_pred cccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCC-CCCccchhcCCCHHHHHHHHHHHhcC
Confidence 688999999999999999999999999999999999999999 779999999 89999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCCCchHHHHHhhccCChhhHHHHHHHHhhhHh--hhcCcccC
Q 038682 214 PEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQER--EETNPAFR 266 (382)
Q Consensus 214 ~~~Y~~yf~Wr~~~~~~~~~~l~~~~~~~~~C~LC~~l~~~~r~~--~~~~~~~~ 266 (382)
+++|++||+||.++.+.... ...+++|+||++|++..++. .++...||
T Consensus 299 ~~~Y~~yf~Wr~~~~~~~~~-----~~~~~~C~lC~~l~~~~~~~~~~~~l~~W~ 348 (349)
T PF00852_consen 299 DELYNKYFEWRKRYEVKRFD-----SWSEGFCRLCKKLHENRRKPKVYPDLNDWW 348 (349)
T ss_dssp HHHHH--------------------------------------------------
T ss_pred HHHHhhhccccccccccccc-----cccccccccccccccccccccccccccccC
Confidence 99999999999988764322 12358999999999872221 12455565
No 3
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=96.49 E-value=0.013 Score=56.28 Aligned_cols=114 Identities=17% Similarity=0.237 Sum_probs=65.6
Q ss_pred EEeeecCCCcccccccccc-cccC--CCCCCcccceEEEEecCCcc------chHHHHHHHHHHhcCcceEEeCCCCCCC
Q 038682 61 MTTSLSSDVPVGYFSWAEY-DIMA--PVQPKTESALAAAFISNCGA------RNFRLQALEALEKENVKIDSYGGCHRNR 131 (382)
Q Consensus 61 MTyr~dSDi~~~Y~s~~~~-~~~~--p~~~K~k~~l~aw~vSNC~~------~~~R~~~v~~L~k~~i~VD~yG~C~~n~ 131 (382)
-+|+..-||++|++..... .... +..+..+++..+.|..+... ...|..+++.+.+. -...... .....
T Consensus 147 ~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~-~~~~~~~-~~~~~ 224 (302)
T PF03016_consen 147 SCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSD-PDFRCSD-GSETC 224 (302)
T ss_pred CcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccC-Ccceeee-ccccc
Confidence 3566677888887642211 1111 11122223345556655432 24578888877652 2222221 11111
Q ss_pred CCchhHHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCC
Q 038682 132 DGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAP 179 (382)
Q Consensus 132 ~~~~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~ 179 (382)
....+-.+.|++-+|.|+ .......+--||+||.+|+|||+++..
T Consensus 225 ~~~~~~~~~l~~S~FCL~---p~G~~~~s~Rl~eal~~GcIPVii~d~ 269 (302)
T PF03016_consen 225 PSPSEYMELLRNSKFCLC---PRGDGPWSRRLYEALAAGCIPVIISDD 269 (302)
T ss_pred ccchHHHHhcccCeEEEE---CCCCCcccchHHHHhhhceeeEEecCc
Confidence 122245678899999999 333445889999999999999999663
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.73 E-value=0.084 Score=42.05 Aligned_cols=60 Identities=23% Similarity=0.442 Sum_probs=49.8
Q ss_pred ccchHHHHHHHhcCeeEEEECCCCcccccCCCC-CceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 157 DYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPK-SILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 157 DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~-SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
+.++-|+++++.+|++.|.-..+.+.+++. ++ .+|-+ +++++|++-|.+|.+|+++.++-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~-~~~~~~~~---~~~~el~~~i~~ll~~~~~~~~i 69 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDSPGLREIFE-DGEHIITY---NDPEELAEKIEYLLENPEERRRI 69 (92)
T ss_pred CCCchHHHHHHHCCCeEEECChHHHHHHcC-CCCeEEEE---CCHHHHHHHHHHHHCCHHHHHHH
Confidence 678889999999999888887777888887 45 45544 48999999999999999877665
No 5
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=90.00 E-value=1.8 Score=45.53 Aligned_cols=85 Identities=21% Similarity=0.392 Sum_probs=59.8
Q ss_pred cceEEEEecCCccchHHHHHHHHHHhcCcceEEeCCCCCCCCC---chhHHhhhccceeEEeeecCCCCccchHHHHHHH
Q 038682 91 SALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDG---RVEKVETLKRYKFSLAFENSNEEDYVTEKFFQAL 167 (382)
Q Consensus 91 ~~l~aw~vSNC~~~~~R~~~v~~L~k~~i~VD~yG~C~~n~~~---~~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al 167 (382)
++..+.|..+-.+..-|...++.+.+ .-..-.++.|.+.... ...-.+.|++.+|.|+.- -.-..++-+++|+
T Consensus 289 R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~---Gd~~ts~R~fdai 364 (464)
T KOG1021|consen 289 RPILAFFAGAPAGGQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPP---GDTPTSPRLFDAI 364 (464)
T ss_pred CceEEEEeccccCCcHHHHHHHHhhc-CcCccccccCCCCccccCCcchHHHHhhcCeEEECCC---CCCcccHhHHHHH
Confidence 34566677663334569988888887 3445667778665332 234578899999999721 2334679999999
Q ss_pred hcCeeEEEECCC
Q 038682 168 VAGSVPVVVGAP 179 (382)
Q Consensus 168 ~~g~VPIv~G~~ 179 (382)
.+|+|||++-+.
T Consensus 365 ~~gCvPViisd~ 376 (464)
T KOG1021|consen 365 VSGCVPVIISDG 376 (464)
T ss_pred HhCCccEEEcCC
Confidence 999999999875
No 6
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=77.72 E-value=5.3 Score=34.53 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=52.4
Q ss_pred HHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCC-ceeecCCCCHHHHHHHHHHHhcCHH
Q 038682 137 KVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKS-ILHIREREDVKSVAKTMKYLAENPE 215 (382)
Q Consensus 137 k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~S-fI~v~dF~s~~eLA~yL~~L~~n~~ 215 (382)
-.+.++...+++..=.. +.+=+ .+.+|+.+|+.+|....+...+++. ++. -+-+++ .+++++++-|..+.+|++
T Consensus 86 l~~~~~~~di~v~~s~~--e~~~~-~~~Ea~~~g~pvI~~~~~~~~e~~~-~~~~g~~~~~-~~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 86 LDELYKSSDIFVSPSRN--EGFGL-SLLEAMACGCPVIASDIGGNNEIIN-DGVNGFLFDP-NDIEELADAIEKLLNDPE 160 (172)
T ss_dssp HHHHHHHTSEEEE-BSS--BSS-H-HHHHHHHTT-EEEEESSTHHHHHSG-TTTSEEEEST-TSHHHHHHHHHHHHHHHH
T ss_pred cccccccceeccccccc--ccccc-ccccccccccceeeccccCCceeec-cccceEEeCC-CCHHHHHHHHHHHHCCHH
Confidence 34566777877776444 33333 8899999999999888776667776 233 233444 489999999999999874
Q ss_pred HHH
Q 038682 216 AYN 218 (382)
Q Consensus 216 ~Y~ 218 (382)
.+.
T Consensus 161 ~~~ 163 (172)
T PF00534_consen 161 LRQ 163 (172)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 7
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=76.77 E-value=7.2 Score=36.65 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=51.4
Q ss_pred HhhhccceeEEeeecCCCC-cc-chHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHH
Q 038682 138 VETLKRYKFSLAFENSNEE-DY-VTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPE 215 (382)
Q Consensus 138 ~e~l~~YKFyLAfENs~c~-DY-VTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~ 215 (382)
.+.++...+.+..-..... ++ +.=|+.+|+..|+-.|....+...+++. .+..-.+-+..++++||+.|..+..|++
T Consensus 289 ~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 289 PELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVE-EAGAGLVVPPGDPEALAAAILELLDDPE 367 (394)
T ss_pred HHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhc-cCCcceEeCCCCHHHHHHHHHHHHhChH
Confidence 4556677766654333321 22 2457899999997555554444555554 2111112245589999999999999998
Q ss_pred HHHHh
Q 038682 216 AYNQS 220 (382)
Q Consensus 216 ~Y~~y 220 (382)
.+.++
T Consensus 368 ~~~~~ 372 (394)
T cd03794 368 ERAEM 372 (394)
T ss_pred HHHHH
Confidence 88765
No 8
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=75.19 E-value=13 Score=34.26 Aligned_cols=79 Identities=13% Similarity=0.063 Sum_probs=52.2
Q ss_pred HhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHH
Q 038682 138 VETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAY 217 (382)
Q Consensus 138 ~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y 217 (382)
.+.++...+.+..-.. +-..-++.+|+..|...|....+...+++. .+....+-+..+++++++.|..+.+|++.+
T Consensus 270 ~~~~~~~di~i~~~~~---~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~ 345 (374)
T cd03801 270 PALYAAADVFVLPSLY---EGFGLVLLEAMAAGLPVVASDVGGIPEVVE-DGETGLLVPPGDPEALAEAILRLLDDPELR 345 (374)
T ss_pred HHHHHhcCEEEecchh---ccccchHHHHHHcCCcEEEeCCCChhHHhc-CCcceEEeCCCCHHHHHHHHHHHHcChHHH
Confidence 4556666766654333 334568999999997666655455666665 122222335567999999999999998777
Q ss_pred HHh
Q 038682 218 NQS 220 (382)
Q Consensus 218 ~~y 220 (382)
.+.
T Consensus 346 ~~~ 348 (374)
T cd03801 346 RRL 348 (374)
T ss_pred HHH
Confidence 654
No 9
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=74.15 E-value=9.4 Score=35.41 Aligned_cols=59 Identities=17% Similarity=0.304 Sum_probs=41.4
Q ss_pred hHHHHHHHhcCeeEEEECCCCcccccCC-CCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 160 TEKFFQALVAGSVPVVVGAPNIQDFAPS-PKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 160 TEK~~~al~~g~VPIv~G~~n~~~~~P~-p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
.=++.+|+.+|..+|+-..+...+++.. .+.++ -+..+++++++-|..+.+|++.+.+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~--~~~~~~~~~~~~i~~l~~~~~~~~~~ 336 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFL--VPPGDAEALADAIERLIEDPELRARM 336 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEE--ECCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 4589999999965555444455666641 12332 35668999999999999998887765
No 10
>PF00159 Hormone_3: Pancreatic hormone peptide; InterPro: IPR001955 Pancreatic hormone (PP) [] is a peptide synthesized in pancreatic islets of Langherhans, which acts as a regulator of pancreatic and gastrointestinal functions. The hormone is produced as a larger propeptide, which is enzymatically cleaved to yield the mature active peptide: this is 36 amino acids in length [] and has an amidated C terminus []. The hormone has a globular structure, residues 2-8 forming a left-handed poly-proline-II-like helix, residues 9-13 a beta turn, and 14-32 an alpha-helix,held close to the first helix by hydrophobic interactions []. Unlike glucagon, another peptide hormone, the structure of pancreatic peptide is preserved in aqueous solution []. Both N and C termini are required for activity: receptor binding and activation functions may reside in the N and C termini respectively []. Pancreatic hormone is part of a wider family of active peptides that includes: Neuropeptide Y (NPY) [], one of the most abundant peptides in the mammalian nervous system. NPY is implicated in the control of feeding and the secretion of the gonadotrophin-releasing hormone. Peptide YY (PYY) []. PPY is a gut peptide that inhibits exocrine pancreatic secretion, has a vasoconstrictory action and inhibits jejunal and colonic mobility. Various NPY and PYY-like polypeptides from fish and amphibians [, ]. Neuropeptide F (NPF) from invertebrates such as worms and snail. Skin peptide Tyr-Tyr (SPYY) from the frog Phyllomedusa bicolor. SPYY shows a large spectra of antibacterial and antifungal activity. All these peptides are 36 to 39 amino acids long. Like most active peptides, their C-terminal is amidated and they are synthesized as larger protein precursors.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 1LJV_A 1BBA_A 1V1D_A 1PPT_A 2H3T_A 2H4B_A 2BF9_A 2H3S_B 1K8V_A 2DF0_A ....
Probab=68.58 E-value=5.1 Score=27.90 Aligned_cols=17 Identities=12% Similarity=0.061 Sum_probs=15.1
Q ss_pred cCCCCHHHHHHHHHHHh
Q 038682 195 REREDVKSVAKTMKYLA 211 (382)
Q Consensus 195 ~dF~s~~eLA~yL~~L~ 211 (382)
.+|+|+++|++|+..|.
T Consensus 9 ~~~aspeel~~Y~~~L~ 25 (36)
T PF00159_consen 9 GDFASPEELAQYYAALR 25 (36)
T ss_dssp STTSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 58899999999999883
No 11
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=65.45 E-value=19 Score=33.87 Aligned_cols=125 Identities=16% Similarity=0.102 Sum_probs=68.9
Q ss_pred eEEEEecCCccchHH---HHHHHHHHhc-CcceEEeCCCCCCC-----------CC---chhHHhhhccceeEEeeecCC
Q 038682 93 LAAAFISNCGARNFR---LQALEALEKE-NVKIDSYGGCHRNR-----------DG---RVEKVETLKRYKFSLAFENSN 154 (382)
Q Consensus 93 l~aw~vSNC~~~~~R---~~~v~~L~k~-~i~VD~yG~C~~n~-----------~~---~~~k~e~l~~YKFyLAfENs~ 154 (382)
....++++-.....= .+.+++|.+. .+.+-+.|.+.... .+ ..+-.+.++.....|.- +.
T Consensus 198 ~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~--s~ 275 (364)
T cd03814 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFP--SR 275 (364)
T ss_pred eEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEEC--cc
Confidence 344455654432211 2334444331 36788888653210 01 11223455666665532 22
Q ss_pred CCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhh
Q 038682 155 EEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSL 221 (382)
Q Consensus 155 c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf 221 (382)
.+. ..=++.+|+.+|+..|....+...+++. .+..-.+-+-.++++|++.|..+.+|++.+++.-
T Consensus 276 ~e~-~~~~~lEa~a~g~PvI~~~~~~~~~~i~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 340 (364)
T cd03814 276 TET-FGLVVLEAMASGLPVVAPDAGGPADIVT-DGENGLLVEPGDAEAFAAALAALLADPELRRRMA 340 (364)
T ss_pred ccc-CCcHHHHHHHcCCCEEEcCCCCchhhhc-CCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 222 2236889999998666555455566665 2222223345678999999999999988877654
No 12
>cd00126 PAH Pancreatic Hormone domain, a regulator of pancreatic and gastrointestinal functions; neuropeptide Y (NPY)b, peptide YY (PYY), and pancreatic polypetide (PP) are closely related; propeptide is enzymatically cleaved to yield the mature active peptide with amidated C-terminal ends; receptor binding and activation functions may reside in the N- and C-termini respectively; occurs in neurons, intestinal endocrine cells, and pancreas; exist as monomers and dimers
Probab=65.39 E-value=6.1 Score=27.53 Aligned_cols=17 Identities=6% Similarity=0.118 Sum_probs=14.9
Q ss_pred cCCCCHHHHHHHHHHHh
Q 038682 195 REREDVKSVAKTMKYLA 211 (382)
Q Consensus 195 ~dF~s~~eLA~yL~~L~ 211 (382)
.||.++++|++|+..|.
T Consensus 9 g~~a~~eel~~Y~~~L~ 25 (36)
T cd00126 9 GDDASPEELRQYLAALR 25 (36)
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 47899999999999883
No 13
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=64.53 E-value=21 Score=32.95 Aligned_cols=77 Identities=16% Similarity=0.200 Sum_probs=48.1
Q ss_pred hhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCC-CcccccCCC-CCceeecCCCCHHHHHHHHHHHhcCHHH
Q 038682 139 ETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAP-NIQDFAPSP-KSILHIREREDVKSVAKTMKYLAENPEA 216 (382)
Q Consensus 139 e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~-n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~n~~~ 216 (382)
+.++...+++.- |..+. ..=++.+|+.+|+-+|+.-.+ ..++++... +.+ +-+..+++++|+.|..|.+|++.
T Consensus 248 ~~~~~ad~~i~p--s~~e~-~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~i~~ll~~~~~ 322 (348)
T cd03820 248 EYYAKASIFVLT--SRFEG-FPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGL--LVPNGDVEALAEALLRLMEDEEL 322 (348)
T ss_pred HHHHhCCEEEeC--ccccc-cCHHHHHHHHcCCCEEEecCCCchHhhhccCcceE--EeCCCCHHHHHHHHHHHHcCHHH
Confidence 455666655542 22222 245799999999877765322 234454421 223 23556799999999999999877
Q ss_pred HHHh
Q 038682 217 YNQS 220 (382)
Q Consensus 217 Y~~y 220 (382)
+.+.
T Consensus 323 ~~~~ 326 (348)
T cd03820 323 RKRM 326 (348)
T ss_pred HHHH
Confidence 6654
No 14
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=58.08 E-value=30 Score=32.86 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=51.5
Q ss_pred HhhhccceeEEeeecC----CCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcC
Q 038682 138 VETLKRYKFSLAFENS----NEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAEN 213 (382)
Q Consensus 138 ~e~l~~YKFyLAfENs----~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n 213 (382)
.+.++...++|.-=.. ..+.+ .=++.+|+.+|.-.|+-..+...+++-....-+.+ +-.+++++|+.|..+.+|
T Consensus 250 ~~~~~~adi~l~~s~~~~~~~~e~~-~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~-~~~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 250 RELLRAADLFVLPSVTAADGDREGL-PVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV-PPGDPEALADAIERLLDD 327 (355)
T ss_pred HHHHHhCCEEEecceecCCCCccCc-cHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe-CCCCHHHHHHHHHHHHhC
Confidence 4566777776653111 11332 56899999999877765545555655422122222 345799999999999999
Q ss_pred HHHHHHh
Q 038682 214 PEAYNQS 220 (382)
Q Consensus 214 ~~~Y~~y 220 (382)
++.+.+.
T Consensus 328 ~~~~~~~ 334 (355)
T cd03799 328 PELRREM 334 (355)
T ss_pred HHHHHHH
Confidence 8776554
No 15
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=57.93 E-value=31 Score=32.83 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=42.6
Q ss_pred hHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhh
Q 038682 160 TEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSL 221 (382)
Q Consensus 160 TEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf 221 (382)
-=++.+|+..|+..|+...+.+.+++.....-+-+ +..+++++|+.|..+.+|++.+.+.-
T Consensus 278 g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~-~~~~~~~~~~~l~~l~~~~~~~~~~~ 338 (365)
T cd03825 278 PNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA-KPGDPEDLAEGIEWLLADPDEREELG 338 (365)
T ss_pred cHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe-CCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 34788999999888877666566665522122223 44579999999999999988776543
No 16
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=57.87 E-value=29 Score=32.16 Aligned_cols=121 Identities=15% Similarity=0.097 Sum_probs=68.6
Q ss_pred ceEEEEecCCccchH---HHHHHHHHHhc--CcceEEeCCCCCCC-----------C------Cc---hhHHhhhcccee
Q 038682 92 ALAAAFISNCGARNF---RLQALEALEKE--NVKIDSYGGCHRNR-----------D------GR---VEKVETLKRYKF 146 (382)
Q Consensus 92 ~l~aw~vSNC~~~~~---R~~~v~~L~k~--~i~VD~yG~C~~n~-----------~------~~---~~k~e~l~~YKF 146 (382)
+....++++...... =.+.++.+.+. .+.+.+.|...... . |. .+..+.++...+
T Consensus 202 ~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 202 KKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred ceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 344455565543221 13445555432 47788888753211 0 11 122345566666
Q ss_pred EEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHH
Q 038682 147 SLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEA 216 (382)
Q Consensus 147 yLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~ 216 (382)
.|..--. +=+-=++.+|+.+|...|+-..+...+++. .+..-.+-+..+++++++-|..+.+|++.
T Consensus 282 ~i~~~~~---~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 282 FVLPSLR---EGFGLVLLEAMACGLPVVATDVGGIPEIIT-DGENGLLVPPGDPEALAEAILRLLADPWL 347 (377)
T ss_pred eecchhh---ccCChHHHHHHhcCCCEEEecCCChHHHhc-CCcceeEECCCCHHHHHHHHHHHhcCcHH
Confidence 6543221 334568999999998666554445556655 33321233566899999999999888763
No 17
>smart00309 PAH Pancreatic hormones / neuropeptide F / peptide YY family. Pancreatic hormone is a regulator of pancreatic and gastrointestinal functions.
Probab=57.47 E-value=10 Score=26.43 Aligned_cols=17 Identities=6% Similarity=0.124 Sum_probs=14.7
Q ss_pred cCCCCHHHHHHHHHHHh
Q 038682 195 REREDVKSVAKTMKYLA 211 (382)
Q Consensus 195 ~dF~s~~eLA~yL~~L~ 211 (382)
.|+.|+++|++|+..|.
T Consensus 9 g~~a~~e~l~~Y~~~L~ 25 (36)
T smart00309 9 GDDASPEDLRQYLAALR 25 (36)
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 47889999999999883
No 18
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=57.29 E-value=24 Score=33.31 Aligned_cols=57 Identities=14% Similarity=0.258 Sum_probs=40.6
Q ss_pred HHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 161 EKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 161 EK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
=++.+|+..|..+|.-..+...+++. .+.++ -+..+++++++.|..+.+|++.+.+.
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~-~~~~~--~~~~~~~~~~~~i~~l~~~~~~~~~~ 343 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG-DAALY--FDPLDPEALAAAIERLLEDPALREEL 343 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec-Cceee--eCCCCHHHHHHHHHHHhcCHHHHHHH
Confidence 35889999997666544445556654 34332 24558999999999999998887765
No 19
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=55.89 E-value=36 Score=32.74 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=38.1
Q ss_pred HHHHHHHhcCeeEEEECCC-CcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 161 EKFFQALVAGSVPVVVGAP-NIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 161 EK~~~al~~g~VPIv~G~~-n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
=++.+|+.+|+ ||+.+.. ...+++...+.-+-+ +-.++++|++.|..+.+|++.+.++
T Consensus 285 ~~~~EA~a~G~-PvI~s~~~~~~e~i~~~~~g~~~-~~~d~~~l~~~i~~l~~~~~~~~~~ 343 (367)
T cd05844 285 VVLLEAQASGV-PVVATRHGGIPEAVEDGETGLLV-PEGDVAALAAALGRLLADPDLRARM 343 (367)
T ss_pred hHHHHHHHcCC-CEEEeCCCCchhheecCCeeEEE-CCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 47889999995 6665543 334444312222222 3468999999999999998876654
No 20
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=55.78 E-value=33 Score=34.21 Aligned_cols=57 Identities=14% Similarity=0.256 Sum_probs=39.3
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCC-CCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPS-PKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~-p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+.+|+..|.-..+.+.+++.. .+.++ -+..++++||+-|..|.+|++...+.
T Consensus 316 ~llEAmA~G~PVIas~~~g~~e~i~~~~~G~l--v~~~d~~~la~~i~~ll~~~~~~~~l 373 (396)
T cd03818 316 SLLEAMACGCLVVGSDTAPVREVITDGENGLL--VDFFDPDALAAAVIELLDDPARRARL 373 (396)
T ss_pred HHHHHHHCCCCEEEcCCCCchhhcccCCceEE--cCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 67899999986555444455566642 12332 35678999999999999998765543
No 21
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=55.33 E-value=30 Score=32.39 Aligned_cols=124 Identities=15% Similarity=0.207 Sum_probs=68.8
Q ss_pred eEEEEecCCccchHH---HHHHHHHHhcCcceEEeCCCCCCCC--------------Cc---hhHHhhhccceeEEeeec
Q 038682 93 LAAAFISNCGARNFR---LQALEALEKENVKIDSYGGCHRNRD--------------GR---VEKVETLKRYKFSLAFEN 152 (382)
Q Consensus 93 l~aw~vSNC~~~~~R---~~~v~~L~k~~i~VD~yG~C~~n~~--------------~~---~~k~e~l~~YKFyLAfEN 152 (382)
....++++......= .+.+.+|.+..+++.+.|....... +. .+-.+.++.....+.--+
T Consensus 192 ~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 192 LRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred eEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 344445555432211 2334444432478999998754221 11 122345666666664311
Q ss_pred CCCCccchHHHHHHHhcCeeEEEECCCCcccccCCC-CCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 153 SNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSP-KSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 153 s~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
. .+. ..=++.+|+..|..+|+--.+...+++... +.++ + +..++++||+.|..+.+|++.+++.
T Consensus 272 ~-~e~-~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~-~-~~~d~~~l~~~i~~l~~~~~~~~~~ 336 (359)
T cd03823 272 W-PEN-FPLVIREALAAGVPVIASDIGGMAELVRDGVNGLL-F-PPGDAEDLAAALERLIDDPDLLERL 336 (359)
T ss_pred c-cCC-CChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEE-E-CCCCHHHHHHHHHHHHhChHHHHHH
Confidence 0 111 223789999999554444334455666521 2332 3 4456999999999999998877765
No 22
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=53.30 E-value=33 Score=32.59 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=37.1
Q ss_pred HHHHHHhcCeeEEEECCCCcccccC--CCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAP--SPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P--~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+.+|...|.-..+...++.. ..+.++ -+..+++++|+.|..|.+|++.+++.
T Consensus 281 ~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~--~~~~d~~~~~~~i~~l~~~~~~~~~~ 339 (357)
T cd03795 281 VLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLV--VPPGDPAALAEAIRRLLEDPELRERL 339 (357)
T ss_pred HHHHHHHcCCCEEecCCCCchhHHhhCCCceEE--eCCCCHHHHHHHHHHHHHCHHHHHHH
Confidence 5788999986555533333333332 122332 35678999999999999998776654
No 23
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=51.77 E-value=35 Score=31.77 Aligned_cols=58 Identities=14% Similarity=0.217 Sum_probs=40.0
Q ss_pred hHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 160 TEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 160 TEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
.=++.+|+..|+-+|+-..+...+++. .+.++ -+..+++++++.|..+.+|++.+.+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~-~~g~~--~~~~~~~~l~~~i~~l~~~~~~~~~~ 339 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVG-DTGFL--VPPGDPEALAEAIEALLADPALRQAL 339 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhh-cCCEE--eCCCCHHHHHHHHHHHHhChHHHHHH
Confidence 348899999996555543344556665 23333 35567999999999999998766543
No 24
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=51.25 E-value=40 Score=31.76 Aligned_cols=59 Identities=17% Similarity=0.236 Sum_probs=39.0
Q ss_pred chHHHHHHHhcCeeEEEECCC-CcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 159 VTEKFFQALVAGSVPVVVGAP-NIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 159 VTEK~~~al~~g~VPIv~G~~-n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
..-.+.+|+..|. ||+...- ..+.+....+.++ -+..+++++|+.|..+.+|++.+.+.
T Consensus 282 ~~~~~~Ea~a~G~-PvI~~~~~~~~~i~~~~~g~~--~~~~d~~~~~~~l~~l~~~~~~~~~~ 341 (366)
T cd03822 282 QSGVLAYAIGFGK-PVISTPVGHAEEVLDGGTGLL--VPPGDPAALAEAIRRLLADPELAQAL 341 (366)
T ss_pred cchHHHHHHHcCC-CEEecCCCChheeeeCCCcEE--EcCCCHHHHHHHHHHHHcChHHHHHH
Confidence 3446778999998 7766542 2334444222333 24457999999999999998777654
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=47.47 E-value=48 Score=32.16 Aligned_cols=57 Identities=21% Similarity=0.336 Sum_probs=37.7
Q ss_pred HHHHHHhcCeeEEEECC-CCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGA-PNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~-~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+..| +||+... +...+++...+.-+.+ +..++++||+.|..|.+|++.+.+.
T Consensus 318 ~l~Ea~a~G-~Pvi~s~~~~~~e~i~~~~~g~~~-~~~~~~~l~~~i~~l~~~~~~~~~~ 375 (398)
T cd03800 318 TALEAMACG-LPVVATAVGGPRDIVVDGVTGLLV-DPRDPEALAAALRRLLTDPALRRRL 375 (398)
T ss_pred HHHHHHhcC-CCEEECCCCCHHHHccCCCCeEEe-CCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 688999999 5766533 2344555422222223 4557999999999999988776544
No 26
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=47.34 E-value=2.8 Score=42.18 Aligned_cols=72 Identities=28% Similarity=0.503 Sum_probs=36.5
Q ss_pred CeeEEEECCCCcccccCCCCC-ceeecCCCCHHHH------HHHHHHHhcCHHHHHHhhhhhhcCCCch--HHHHHhhcc
Q 038682 170 GSVPVVVGAPNIQDFAPSPKS-ILHIREREDVKSV------AKTMKYLAENPEAYNQSLSWKYEGPSDS--FKALVDMAA 240 (382)
Q Consensus 170 g~VPIv~G~~n~~~~~P~p~S-fI~v~dF~s~~eL------A~yL~~L~~n~~~Y~~yf~Wr~~~~~~~--~~~l~~~~~ 240 (382)
..|||| |.+ ..+++|.=.+ .+..++.+.+++- -.....=+.++...-+|..||. |.+++ |+..
T Consensus 11 yVIpvV-gR~-~~dV~P~~~~~~~~~~~~~~vkd~~~~~~~~~~~~~~~~~~~~~y~~~~W~~-G~V~n~~y~~y----- 82 (325)
T PF03213_consen 11 YVIPVV-GRP-PSDVFPTLKSEVIEADDVDPVKDEPKPSPTPAPPPSPDPDPSPSYKYYEWKK-GGVDNKDYKEY----- 82 (325)
T ss_pred EEEeec-CCC-hhhcCCCCcccccchhcccccCccccCCCCCCCCCCCccccCcccceEEecc-CCcCcccHHHH-----
Confidence 367888 665 6677773122 2333333332221 0111112223334448889987 66665 6543
Q ss_pred CChhhH-HHH
Q 038682 241 VHSSCR-LCI 249 (382)
Q Consensus 241 ~~~~C~-LC~ 249 (382)
..+.|+ +|.
T Consensus 83 fS~~C~~~Ct 92 (325)
T PF03213_consen 83 FSGLCNSLCT 92 (325)
T ss_pred HHHHHhhhcc
Confidence 347888 785
No 27
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=45.03 E-value=70 Score=30.80 Aligned_cols=57 Identities=21% Similarity=0.263 Sum_probs=37.5
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCC-CCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPS-PKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~-p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
.+.+|+..|.-.|.-..+...+++.. .+.++ -+..++++||+-|..|.+|++.+.+.
T Consensus 286 ~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~--~~~~~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 286 AALEAMACGVPVVASNAGGIPEVVKHGETGFL--VDVGDVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred HHHHHHHcCCCEEEeCCCCchhhhcCCCceEE--cCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 57888999855444433445555541 12333 24568999999999998888776553
No 28
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=44.57 E-value=55 Score=30.63 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=51.2
Q ss_pred HhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHH
Q 038682 138 VETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAY 217 (382)
Q Consensus 138 ~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y 217 (382)
.+.++...+.+.--.+ +.+ .=++.+|+..|+.+|+...+...+++.....-+-+++. +. ++++.|..+.+|++.+
T Consensus 273 ~~~~~~ad~~l~~s~~--e~~-~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~-~~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 273 PDYYKAADLFVFASTT--ETQ-GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPG-DE-ALAEALLRLLQDPELR 347 (374)
T ss_pred HHHHHHcCEEEecccc--cCc-ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCC-CH-HHHHHHHHHHhChHHH
Confidence 4556777776654222 222 23788999999888776666666666521223334433 34 9999999999999887
Q ss_pred HHhh
Q 038682 218 NQSL 221 (382)
Q Consensus 218 ~~yf 221 (382)
+++-
T Consensus 348 ~~~~ 351 (374)
T cd03817 348 RRLS 351 (374)
T ss_pred HHHH
Confidence 6553
No 29
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=44.16 E-value=64 Score=32.27 Aligned_cols=58 Identities=21% Similarity=0.310 Sum_probs=36.3
Q ss_pred hHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 160 TEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 160 TEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
.-|+.+|+.+|. ||+-...-.+.+.-..+.-+-+. .+++++|+-|..|.+|++..++.
T Consensus 312 ~~~~lEAma~G~-PVV~t~~~~~~i~~~~~~g~lv~--~~~~~la~ai~~ll~~~~~~~~~ 369 (397)
T TIGR03087 312 QNKVLEAMAMAK-PVVASPEAAEGIDALPGAELLVA--ADPADFAAAILALLANPAEREEL 369 (397)
T ss_pred ccHHHHHHHcCC-CEEecCcccccccccCCcceEeC--CCHHHHHHHHHHHHcCHHHHHHH
Confidence 448999999996 66654321122211112222233 68999999999999998765543
No 30
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=43.98 E-value=52 Score=30.71 Aligned_cols=78 Identities=17% Similarity=0.177 Sum_probs=46.9
Q ss_pred HhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHH
Q 038682 138 VETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAY 217 (382)
Q Consensus 138 ~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y 217 (382)
.+.++...+.+.- |..+.+ .=++.+|+..|..+|.-..+.+.+++.. +.-+.+ + .+++++++-|..|.+|++.+
T Consensus 276 ~~~~~~adv~v~p--s~~e~~-~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~i~~l~~~~~~~ 349 (375)
T cd03821 276 AAALADADLFVLP--SHSENF-GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-D-DDVDALAAALRRALELPQRL 349 (375)
T ss_pred HHHHhhCCEEEec--cccCCC-CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-C-CChHHHHHHHHHHHhCHHHH
Confidence 3445555554431 111222 2368899999975555444456666662 332222 2 24699999999999998777
Q ss_pred HHhh
Q 038682 218 NQSL 221 (382)
Q Consensus 218 ~~yf 221 (382)
.+.-
T Consensus 350 ~~~~ 353 (375)
T cd03821 350 KAMG 353 (375)
T ss_pred HHHH
Confidence 6653
No 31
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=43.74 E-value=49 Score=31.57 Aligned_cols=60 Identities=13% Similarity=-0.010 Sum_probs=40.7
Q ss_pred HHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHhhh
Q 038682 161 EKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLS 222 (382)
Q Consensus 161 EK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~yf~ 222 (382)
=++.+|+..|+.+|.--.+-..+.+.....++. .-++++++|+.|..|.+|++...+.-.
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~--~~~~~~~~a~~i~~l~~~~~~~~~~~~ 340 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTDLVKFLS--LDESPEIWAEEILKLKSEDRRERSSES 340 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhccCccEEe--CCCCHHHHHHHHHHHHhCcchhhhhhh
Confidence 367889999977766544444444442233433 334689999999999999988776633
No 32
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=42.87 E-value=67 Score=31.41 Aligned_cols=57 Identities=18% Similarity=0.314 Sum_probs=38.5
Q ss_pred HHHHHHHhcCeeEEEECCC-CcccccCCC-CCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 161 EKFFQALVAGSVPVVVGAP-NIQDFAPSP-KSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 161 EK~~~al~~g~VPIv~G~~-n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
=++.+|+.+|. ||+.... ...+++... +.++ -+-.++++||+.|..|.+|++.+.+.
T Consensus 287 ~~~lEAma~G~-Pvv~s~~~g~~e~i~~~~~g~~--~~~~d~~~la~~i~~l~~~~~~~~~~ 345 (374)
T TIGR03088 287 NTILEAMASGL-PVIATAVGGNPELVQHGVTGAL--VPPGDAVALARALQPYVSDPAARRAH 345 (374)
T ss_pred hHHHHHHHcCC-CEEEcCCCCcHHHhcCCCceEE--eCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 36788999995 7766542 345565421 2222 24578999999999999888776654
No 33
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=42.77 E-value=57 Score=29.94 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=48.6
Q ss_pred hhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHH---HHHHHHHhcCHH
Q 038682 139 ETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSV---AKTMKYLAENPE 215 (382)
Q Consensus 139 e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eL---A~yL~~L~~n~~ 215 (382)
+.++...+++.- |..+.+ -=++.+|+..|..+|+-..+...+++- .+.--.+-+-++++++ ++.|..+..|++
T Consensus 259 ~~~~~~d~~i~p--s~~e~~-~~~~~Ea~~~G~PvI~~~~~~~~e~i~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 259 PYLKAADLFVLS--SRYEGF-PNVLLEAMALGTPVVATDCPGPREILE-DGENGLLVPVGDEAALAAAALALLDLLLDPE 334 (353)
T ss_pred HHHHhCCEEEeC--cccCCC-CcHHHHHHHhCCCEEEcCCCChHHHhc-CCCceEEECCCCHHHHHHHHHHHHhccCChH
Confidence 455666666542 333332 347899999998888766555556654 2222223355678888 778888888877
Q ss_pred HHHHh
Q 038682 216 AYNQS 220 (382)
Q Consensus 216 ~Y~~y 220 (382)
.+.+.
T Consensus 335 ~~~~~ 339 (353)
T cd03811 335 LRERL 339 (353)
T ss_pred HHHHH
Confidence 66554
No 34
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=41.57 E-value=59 Score=30.85 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=44.5
Q ss_pred hhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHH
Q 038682 139 ETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYN 218 (382)
Q Consensus 139 e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~ 218 (382)
+.++....++.- |..+.. -=++.+|+.+|..+|+--.+...+++. ++.++. +-.+++++|+.|..+.++++.+.
T Consensus 258 ~~~~~ad~~v~~--s~~e~~-~~~~~Ea~a~G~PvI~~~~~~~~e~i~-~~g~~~--~~~~~~~~~~~i~~ll~~~~~~~ 331 (360)
T cd04951 258 AYYNAADLFVLS--SAWEGF-GLVVAEAMACELPVVATDAGGVREVVG-DSGLIV--PISDPEALANKIDEILKMSGEER 331 (360)
T ss_pred HHHHhhceEEec--ccccCC-ChHHHHHHHcCCCEEEecCCChhhEec-CCceEe--CCCCHHHHHHHHHHHHhCCHHHH
Confidence 445555554432 333332 347889999998666654445566665 334332 33689999999999874444443
No 35
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=41.21 E-value=70 Score=30.44 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=38.1
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCCC-CCceeecCCCCHHHHHHHHH-HHhcCHHHHHH
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPSP-KSILHIREREDVKSVAKTMK-YLAENPEAYNQ 219 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~-~L~~n~~~Y~~ 219 (382)
++++|+.+|+-+|....+...+++... +.++ + +..++++|++-|. .+..|++...+
T Consensus 280 ~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~-~-~~~~~~~l~~~i~~~~~~~~~~~~~ 337 (355)
T cd03819 280 TAVEAQAMGRPVIASDHGGARETVRPGETGLL-V-PPGDAEALAQALDQILSLLPEGRAK 337 (355)
T ss_pred HHHHHHhcCCCEEEcCCCCcHHHHhCCCceEE-e-CCCCHHHHHHHHHHHHhhCHHHHHH
Confidence 789999999977766555666766522 2333 3 5678999999995 55556554433
No 36
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=40.96 E-value=24 Score=29.07 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=42.1
Q ss_pred hHHhhhccceeEEeeecCCCCccchHHHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcC
Q 038682 136 EKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAEN 213 (382)
Q Consensus 136 ~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n 213 (382)
+..+.++.+...+..-.... =..=|+.+++.+|..+|+.+. ....+....+.=+-+ .++++++++-|..|.+|
T Consensus 63 e~~~~l~~~dv~l~p~~~~~--~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~--~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRFNE--GFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV--ANDPEELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS-S--CC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE---TT-HHHHHHHHHHHHH-
T ss_pred HHHHHHHhCCEEEEEeeCCC--cCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE--CCCHHHHHHHHHHHhcC
Confidence 45667888888886432111 234799999999998888776 344443211222222 66899999999998765
No 37
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=40.47 E-value=85 Score=31.13 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=38.1
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+.+|+-.|.-..+...+++. .+.--.+-+-.++++||+.|..+.+|++.++++
T Consensus 318 ~~lEAma~G~Pvi~~~~~~~~e~i~-~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~ 375 (405)
T TIGR03449 318 VAMEAQACGTPVVAARVGGLPVAVA-DGETGLLVDGHDPADWADALARLLDDPRTRIRM 375 (405)
T ss_pred HHHHHHHcCCCEEEecCCCcHhhhc-cCCceEECCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 6889999996555544444555554 221111224568999999999999888766554
No 38
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=39.01 E-value=76 Score=32.75 Aligned_cols=56 Identities=27% Similarity=0.454 Sum_probs=38.6
Q ss_pred HHHHHHhcCeeEEEECC-CCcccccCC----CCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGA-PNIQDFAPS----PKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~-~n~~~~~P~----p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+.+| +||+.-. ..+.+++.. .+.++- +-.++++||+.|..|.+|++...++
T Consensus 347 ~vlEAmA~G-~PVI~s~~gg~~eiv~~~~~~~~G~lv--~~~d~~~la~~i~~ll~~~~~~~~~ 407 (465)
T PLN02871 347 VVLEAMASG-VPVVAARAGGIPDIIPPDQEGKTGFLY--TPGDVDDCVEKLETLLADPELRERM 407 (465)
T ss_pred HHHHHHHcC-CCEEEcCCCCcHhhhhcCCCCCceEEe--CCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 688999999 7776432 245556541 233432 4468999999999999998876554
No 39
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=35.25 E-value=1.1e+02 Score=29.88 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=36.4
Q ss_pred HHHHHHhcCeeEEEECCC-CcccccC-CCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAP-NIQDFAP-SPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~-n~~~~~P-~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
.+.+|+.+|+..|....+ -..+++- ..+.++ -+..++++||+.|..+.+|++.+++.
T Consensus 294 ~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~l--v~~~d~~~la~~i~~ll~~~~~~~~~ 352 (372)
T cd04949 294 SLMEALSHGLPVISYDVNYGPSEIIEDGENGYL--VPKGDIEALAEAIIELLNDPKLLQKF 352 (372)
T ss_pred HHHHHHhCCCCEEEecCCCCcHHHcccCCCceE--eCCCcHHHHHHHHHHHHcCHHHHHHH
Confidence 577889998755543211 1223332 123333 35578999999999999998776665
No 40
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=34.93 E-value=1.1e+02 Score=31.25 Aligned_cols=59 Identities=15% Similarity=0.370 Sum_probs=39.6
Q ss_pred chHHHHHHHhcCeeEEEEC-CCCcccccCCC-CCceeecCCCCHHHHHHHHHHHhc-CHHHHHHh
Q 038682 159 VTEKFFQALVAGSVPVVVG-APNIQDFAPSP-KSILHIREREDVKSVAKTMKYLAE-NPEAYNQS 220 (382)
Q Consensus 159 VTEK~~~al~~g~VPIv~G-~~n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~-n~~~Y~~y 220 (382)
+-=++.+|+..|. ||+-- .+.+.+++... +.++ + +-.++++||+.|..|.+ |++...+.
T Consensus 317 ~p~~llEAma~G~-PVI~t~~~g~~E~v~~~~~G~l-v-~~~d~~~la~ai~~l~~~d~~~~~~~ 378 (406)
T PRK15427 317 IPVALMEAMAVGI-PVVSTLHSGIPELVEADKSGWL-V-PENDAQALAQRLAAFSQLDTDELAPV 378 (406)
T ss_pred ccHHHHHHHhCCC-CEEEeCCCCchhhhcCCCceEE-e-CCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 3458899999995 66543 23455655422 2333 3 45689999999999988 88766554
No 41
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=33.91 E-value=99 Score=31.40 Aligned_cols=65 Identities=15% Similarity=0.353 Sum_probs=41.7
Q ss_pred CCCCccchHHHHHHHhcCeeEEEECC-CCcccccCCC-CCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 153 SNEEDYVTEKFFQALVAGSVPVVVGA-PNIQDFAPSP-KSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 153 s~c~DYVTEK~~~al~~g~VPIv~G~-~n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
|..++ +.=++.+|+..| +||+-.. +.+.+++... +.++ +.+-.++++||+-|..|.+|++.+.++
T Consensus 318 S~~Eg-~p~~llEAma~G-~PVIas~vgg~~e~i~~~~~G~l-~~~~~~~~~la~~I~~ll~~~~~~~~m 384 (407)
T cd04946 318 SESEG-LPVSIMEAMSFG-IPVIATNVGGTPEIVDNGGNGLL-LSKDPTPNELVSSLSKFIDNEEEYQTM 384 (407)
T ss_pred Ccccc-ccHHHHHHHHcC-CCEEeCCCCCcHHHhcCCCcEEE-eCCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 33444 334688899999 5887332 1234454421 2343 444557999999999999998887654
No 42
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=28.89 E-value=1.1e+02 Score=31.28 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=36.3
Q ss_pred HHHHHHhcCeeEEEECCC-Cccccc----CCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHH
Q 038682 162 KFFQALVAGSVPVVVGAP-NIQDFA----PSPKSILHIREREDVKSVAKTMKYLAENPEAYNQ 219 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~-n~~~~~----P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~ 219 (382)
.+.+|+.+|+.||..... ..++++ .....|+ +++++++|+-|..|.+|++...+
T Consensus 340 ~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l----~~d~~~la~ai~~ll~~~~~~~~ 398 (419)
T cd03806 340 GVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFL----ASTAEEYAEAIEKILSLSEEERL 398 (419)
T ss_pred HHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEE----eCCHHHHHHHHHHHHhCCHHHHH
Confidence 567899999988876421 233443 2234555 34899999999999887654443
No 43
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=28.79 E-value=1.4e+02 Score=29.07 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=36.9
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
-+.+|+.+|+..|....+...+++...+.-+-+. .+++++|+-|..+.+|++...++
T Consensus 315 ~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~--~~~~~~a~~i~~l~~~~~~~~~~ 371 (392)
T cd03805 315 VPLEAMYAGKPVIACNSGGPLETVVDGETGFLCE--PTPEEFAEAMLKLANDPDLADRM 371 (392)
T ss_pred hHHHHHHcCCCEEEECCCCcHHHhccCCceEEeC--CCHHHHHHHHHHHHhChHHHHHH
Confidence 3578999996555554444455554222333343 37999999999999988665553
No 44
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=28.41 E-value=1.1e+02 Score=29.19 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=37.9
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+..|+..|.-..+...+++. .+.++ |...+.||+.|..|.+|++.+.++
T Consensus 284 ~~~EAma~G~PvI~s~~~~~~e~~~-~~g~~----~~~~~~l~~~i~~l~~~~~~~~~~ 337 (363)
T cd04955 284 SLLEAMAYGCPVLASDNPFNREVLG-DKAIY----FKVGDDLASLLEELEADPEEVSAM 337 (363)
T ss_pred HHHHHHHcCCCEEEecCCccceeec-CCeeE----ecCchHHHHHHHHHHhCHHHHHHH
Confidence 7899999999777765555566665 33333 222333999999999998777664
No 45
>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]
Probab=26.99 E-value=48 Score=36.59 Aligned_cols=37 Identities=35% Similarity=0.642 Sum_probs=28.4
Q ss_pred ecCCCCccc-hHHHHHHH--------hcCeeEEEECCCCcccccCCC
Q 038682 151 ENSNEEDYV-TEKFFQAL--------VAGSVPVVVGAPNIQDFAPSP 188 (382)
Q Consensus 151 ENs~c~DYV-TEK~~~al--------~~g~VPIv~G~~n~~~~~P~p 188 (382)
||++|-.|| ||.+.+-+ -.|+|||+|.-+-| +|-|+|
T Consensus 271 e~gNvANyVETEqil~~~~H~LSFvQ~RGSvPvfWSQ~Gy-kYrPpp 316 (949)
T KOG1890|consen 271 EAGNVANYVETEQILNIFEHELSFVQCRGSVPVFWSQRGY-KYRPPP 316 (949)
T ss_pred cccchhhhhhHHHHHHhhhceeeEEEeecccceeecccCc-ccCCCc
Confidence 899999999 68876543 26999999998865 455634
No 46
>PLN02683 pyruvate dehydrogenase E1 component subunit beta
Probab=25.61 E-value=4.4e+02 Score=26.90 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=63.3
Q ss_pred HHHHHHHHhcCcceEEeCC-CCCCCCCchhHHhhhccceeEEeeecCCCCccchHHHHHHHhc------CeeEEEECCCC
Q 038682 108 LQALEALEKENVKIDSYGG-CHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVA------GSVPVVVGAPN 180 (382)
Q Consensus 108 ~~~v~~L~k~~i~VD~yG~-C~~n~~~~~~k~e~l~~YKFyLAfENs~c~DYVTEK~~~al~~------g~VPIv~G~~n 180 (382)
++..++|.+.||.+.+..- +.+.-| ...-.+.+++++..+.+|+..-.+=+-+.+-..+.. +.=+.-+|.+|
T Consensus 244 l~Aa~~L~~~GI~v~VId~~~ikPlD-~~~l~~~~~~t~~vvtvEE~~~~GGlGs~Va~~l~e~~f~~~~~~v~rlg~~d 322 (356)
T PLN02683 244 LKAAEILAKEGISAEVINLRSIRPLD-RDTINASVRKTNRLVTVEEGWPQHGVGAEICASVVEESFDYLDAPVERIAGAD 322 (356)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCccC-HHHHHHHHhhcCeEEEEeCCCcCCCHHHHHHHHHHHhchhccCCCeEEeccCC
Confidence 5667888878999998853 333222 111235678999999999998665455555543322 22344567777
Q ss_pred cccccCCCCCceeecCCCCHHHHHHHHHHHh
Q 038682 181 IQDFAPSPKSILHIREREDVKSVAKTMKYLA 211 (382)
Q Consensus 181 ~~~~~P~p~SfI~v~dF~s~~eLA~yL~~L~ 211 (382)
. ..| ++..+.-.-+.|++++++-++.|.
T Consensus 323 ~--~~p-~~~~le~~~~p~~~~i~~a~~~~~ 350 (356)
T PLN02683 323 V--PMP-YAANLERLALPQVEDIVRAAKRAC 350 (356)
T ss_pred c--CCC-ccHHHHHhhCCCHHHHHHHHHHHH
Confidence 5 244 344444455678999999888875
No 47
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=25.15 E-value=1.6e+02 Score=30.54 Aligned_cols=57 Identities=18% Similarity=0.305 Sum_probs=37.5
Q ss_pred HHHHHHhcCeeEEEECCCCcccccCC-------CCCceeecCCCCHHHHHHHHHHHhcCHHHHHHh
Q 038682 162 KFFQALVAGSVPVVVGAPNIQDFAPS-------PKSILHIREREDVKSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~~n~~~~~P~-------p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y~~y 220 (382)
++.+|+.+|+-.|.-..+...+++-. .+.++ + +-.++++||+-|..|.+|++.++++
T Consensus 386 ~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l-v-~~~d~~~la~ai~~ll~~~~~~~~~ 449 (475)
T cd03813 386 VILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV-V-PPADPEALARAILRLLKDPELRRAM 449 (475)
T ss_pred HHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE-E-CCCCHHHHHHHHHHHhcCHHHHHHH
Confidence 78899999974444222334455441 02222 2 4567999999999999998876665
No 48
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=24.55 E-value=2.4e+02 Score=28.31 Aligned_cols=53 Identities=21% Similarity=0.312 Sum_probs=35.1
Q ss_pred HHHHHHhcCeeEEEECC-CCcccccCCC-CCceeecCCCCHHHHHHHHHHHhcCHHH
Q 038682 162 KFFQALVAGSVPVVVGA-PNIQDFAPSP-KSILHIREREDVKSVAKTMKYLAENPEA 216 (382)
Q Consensus 162 K~~~al~~g~VPIv~G~-~n~~~~~P~p-~SfI~v~dF~s~~eLA~yL~~L~~n~~~ 216 (382)
.+.+|+.+| +||+-.. ....+++-.. +.++ +.+-.++++||+.|..|.+|++.
T Consensus 293 ~~lEAma~G-~PVI~s~~gg~~Eiv~~~~~G~~-l~~~~d~~~la~~I~~ll~d~~~ 347 (380)
T PRK15484 293 VAVEAMAAG-KPVLASTKGGITEFVLEGITGYH-LAEPMTSDSIISDINRTLADPEL 347 (380)
T ss_pred HHHHHHHcC-CCEEEeCCCCcHhhcccCCceEE-EeCCCCHHHHHHHHHHHHcCHHH
Confidence 577899999 6665543 2344555311 2332 34556799999999999998864
No 49
>CHL00145 psaD photosystem I subunit II; Validated
Probab=23.43 E-value=40 Score=29.90 Aligned_cols=16 Identities=50% Similarity=0.785 Sum_probs=13.5
Q ss_pred CCcceEEEEecCchhh
Q 038682 335 EDELKIYRIHPVGLTQ 350 (382)
Q Consensus 335 ~~~~~~~~~~~~~~~~ 350 (382)
..+.|||||||-|=+|
T Consensus 79 I~dyKIYRifP~Ge~~ 94 (139)
T CHL00145 79 INDYKIYRIFPNGEVQ 94 (139)
T ss_pred ccccEEEEECCCCceE
Confidence 5689999999988665
No 50
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=21.18 E-value=1.4e+02 Score=29.42 Aligned_cols=55 Identities=9% Similarity=0.133 Sum_probs=35.9
Q ss_pred HHHHHHHhcCeeEEEEC-CCCcccccCC-CCCceeecCCCCHHHHHHHHHHHhcCHHHH
Q 038682 161 EKFFQALVAGSVPVVVG-APNIQDFAPS-PKSILHIREREDVKSVAKTMKYLAENPEAY 217 (382)
Q Consensus 161 EK~~~al~~g~VPIv~G-~~n~~~~~P~-p~SfI~v~dF~s~~eLA~yL~~L~~n~~~Y 217 (382)
=++.+|+.+|+..|... .....+++-. .+.++ + +-.++++||+-|..|.+|++.+
T Consensus 272 ~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~l-v-~~~d~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 272 MTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGEL-Y-TPGNIDEFVGKLNKVISGEVKY 328 (359)
T ss_pred hHHHHHHHcCCCEEEeCCCCChHHHccCCCceEE-E-CCCCHHHHHHHHHHHHhCcccC
Confidence 46788999995444443 2334555541 12333 2 4468999999999999988655
No 51
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=20.87 E-value=2.3e+02 Score=28.82 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=39.8
Q ss_pred chHHHHHHHhcCeeEEEECC-CCcccccC-CCCCceeecCCCCHHHHHHHHHHHhcC---HHHHHHh
Q 038682 159 VTEKFFQALVAGSVPVVVGA-PNIQDFAP-SPKSILHIREREDVKSVAKTMKYLAEN---PEAYNQS 220 (382)
Q Consensus 159 VTEK~~~al~~g~VPIv~G~-~n~~~~~P-~p~SfI~v~dF~s~~eLA~yL~~L~~n---~~~Y~~y 220 (382)
+-=|+.+|+.+|. ||+... +...+++- ..+.++ + +++++||+-|..|.+| ++.++++
T Consensus 330 ~p~~~~Eama~G~-PVI~s~~~~~~eiv~~~~~G~l-v---~d~~~la~~i~~ll~~~~~~~~~~~m 391 (415)
T cd03816 330 LPMKVVDMFGCGL-PVCALDFKCIDELVKHGENGLV-F---GDSEELAEQLIDLLSNFPNRGKLNSL 391 (415)
T ss_pred CcHHHHHHHHcCC-CEEEeCCCCHHHHhcCCCCEEE-E---CCHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 4558999999987 776633 23445542 123454 3 3799999999999888 7877766
No 52
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=20.48 E-value=2.2e+02 Score=29.38 Aligned_cols=56 Identities=18% Similarity=0.270 Sum_probs=35.6
Q ss_pred HHHHHhcCeeEEEECCCCcccccCC-------CCCceeecCCCCHHHHHHHHHHHhc----CHHHHHHh
Q 038682 163 FFQALVAGSVPVVVGAPNIQDFAPS-------PKSILHIREREDVKSVAKTMKYLAE----NPEAYNQS 220 (382)
Q Consensus 163 ~~~al~~g~VPIv~G~~n~~~~~P~-------p~SfI~v~dF~s~~eLA~yL~~L~~----n~~~Y~~y 220 (382)
..+|+.+|+.||+-...-..+.+.. .+.++ + +-.++++||+-|..+.+ |++.+++.
T Consensus 382 ~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l-~-~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 448 (473)
T TIGR02095 382 QLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFL-F-EEYDPGALLAALSRALRLYRQDPSLWEAL 448 (473)
T ss_pred HHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEE-e-CCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 4568999999987654444444431 12333 3 33579999999988765 66655544
No 53
>KOG3307 consensus Molybdopterin converting factor subunit 2 [Coenzyme transport and metabolism]
Probab=20.37 E-value=38 Score=30.04 Aligned_cols=12 Identities=58% Similarity=1.154 Sum_probs=10.1
Q ss_pred CCcccccccCCc
Q 038682 319 KHVPIWKQERPK 330 (382)
Q Consensus 319 ~~~~~w~~~~~~ 330 (382)
.||||||.|.=+
T Consensus 122 a~vPIwKkE~Ye 133 (150)
T KOG3307|consen 122 AHVPIWKKEEYE 133 (150)
T ss_pred hcCCcccceeee
Confidence 599999998765
No 54
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=20.12 E-value=2.3e+02 Score=27.58 Aligned_cols=57 Identities=16% Similarity=0.265 Sum_probs=34.6
Q ss_pred HHHHHhcCeeEEEECCCCcccccCCCCCceeecCCCCH------HHHHHHHHHHhcCHHHHHHh
Q 038682 163 FFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDV------KSVAKTMKYLAENPEAYNQS 220 (382)
Q Consensus 163 ~~~al~~g~VPIv~G~~n~~~~~P~p~SfI~v~dF~s~------~eLA~yL~~L~~n~~~Y~~y 220 (382)
+.+|+.+|.-.|+-..+...+++.....-+-+ +..++ ++|++-|..+.+|++.++++
T Consensus 297 ~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~-~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 359 (388)
T TIGR02149 297 NLEAMACGTPVVASATGGIPEVVVDGETGFLV-PPDNSDADGFQAELAKAINILLADPELAKKM 359 (388)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc-CCCCCcccchHHHHHHHHHHHHhCHHHHHHH
Confidence 46788888744443334455555422222222 33445 89999999999998876654
Done!