BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038685
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STE7|R13L3_ARATH Putative disease resistance RPP13-like protein 3 OS=Arabidopsis
thaliana GN=RPP13L3 PE=3 SV=1
Length = 847
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 162 IVGLEDEMKELL-DLLIVGEPSLS-VVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW- 218
+VGLED++K LL LL E S +++I G G KT A + YNS +K F CRAW
Sbjct: 162 VVGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWT 221
Query: 219 -VGCEYYLHKVLDNIIKSV 236
V EY +L II+S+
Sbjct: 222 YVSQEYKTRDILIRIIRSL 240
>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13
PE=2 SV=2
Length = 835
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 19 EEGTLPDAAKEQFQNLYTEIEIVTSLLSNYENDMFQILFQSLGGEEEFDFSELQGILKEM 78
EE ++ A KE + L TE+ + L + E E E + S+ K +
Sbjct: 19 EEASMFMAVKEDLEELKTELTCIHGYLKDVE-----------AREREDEVSKEWS--KLV 65
Query: 79 KDFVHESEKVIYIFMIS-----------RITQQISGS-SSKDLFDALLGLQSQIIDIKQQ 126
DF ++ E V+ + + R+T +I + + D + L+ +I+DI ++
Sbjct: 66 LDFAYDVEDVLDTYHLKLEERSQRRGLRRLTNKIGRKMDAYSIVDDIRILKRRILDITRK 125
Query: 127 LQQF------RP----NTIGLWVELKSYFIEARNSSSTAGSKKRNIVGLEDEMKELLD-L 175
+ + P NT L V + R + S ++ +VGLED+ K LL+ L
Sbjct: 126 RETYGIGGLKEPQGGGNTSSLRVR------QLRRARSV--DQEEVVVGLEDDAKILLEKL 177
Query: 176 LIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW--VGCEYYLHKVLDNII 233
L E + +++I G G KT A + YNS +K F RAW V EY +L II
Sbjct: 178 LDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILMRII 237
Query: 234 KSV 236
+S+
Sbjct: 238 RSL 240
>sp|Q9LQ54|DRL12_ARATH Probable disease resistance protein At1g59620 OS=Arabidopsis
thaliana GN=At1g59620 PE=2 SV=3
Length = 870
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 75 LKEMKDFVHESEKVIYIFMISRITQQISGSSSK-DLFDALLGLQSQI-IDIKQQLQQFRP 132
+KE+K+ V+++E +I F+ + + G + F +L + +I ID++ ++
Sbjct: 62 VKEVKEIVYDTEDIIETFLRKKQLGRTRGMKKRIKEFACVLPDRRKIAIDMEGLSKRIAK 121
Query: 133 NTIGLWVELKSYFIEARNSSSTAGSKKRNI-VGLEDEMKELLDLLIVGEPSLSVVAIVGS 191
+ RN T + ++ VGLE+ +K+L+ L+ E S VV+I G
Sbjct: 122 K-------------DKRNMRQTFSNNNESVLVGLEENVKKLVGHLVEVEDSSQVVSITGM 168
Query: 192 SGFDKTDFAGEAYNSNYMKNYFYCRAWVGC--EYYLHKVLDNIIKSVMPRSMGSEIMDKD 249
G KT A + +N +K++F AWV ++ V I++ V P + E+ + +
Sbjct: 169 GGIGKTTLARQVFNHETVKSHFAQLAWVCVSQQFTRKYVWQTILRKVGPEYIKLEMTEDE 228
Query: 250 YELKI 254
+ K+
Sbjct: 229 LQEKL 233
>sp|Q9XIF0|DRL13_ARATH Putative disease resistance protein At1g59780 OS=Arabidopsis
thaliana GN=At1g59780 PE=2 SV=1
Length = 906
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 45/209 (21%)
Query: 72 QGILKEMKDFVHESEKVIYIFMIS----------------RITQQISGSSSKDLFDAL-- 113
+ L+E+K+ +++E +I IF++ I QI+ S SK + +
Sbjct: 64 RNCLEEIKEITYDAEDIIEIFLLKGSVNMRSLACFPGGRREIALQIT-SISKRISKVIQV 122
Query: 114 ---LGLQSQI---IDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSKKRNIVGLED 167
LG++S I +D QL++ R EL+ F + + N+VGLE
Sbjct: 123 MQNLGIKSDIMDGVDSHAQLERKR--------ELRHTF---------SSESESNLVGLEK 165
Query: 168 EMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAWVGC--EYYL 225
+++L++ L VG S V+I G G KT A + ++ + +K++F AWV E+
Sbjct: 166 NVEKLVEEL-VGNDSSHGVSITGLGGLGKTTLARQIFDHDKVKSHFDGLAWVCVSQEFTR 224
Query: 226 HKVLDNIIKSVMPRSMGSEIMDKDYELKI 254
V I+ ++ P+ S++ + D + K+
Sbjct: 225 KDVWKTILGNLSPKYKDSDLPEDDIQKKL 253
>sp|Q9STE5|R13L2_ARATH Putative disease resistance RPP13-like protein 2 OS=Arabidopsis
thaliana GN=RPP13L2 PE=3 SV=1
Length = 847
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 25/238 (10%)
Query: 19 EEGTLPDAAKEQFQNLYTEIEIVTSLLSNYE----NDMFQILFQSLGGEEEFDFSELQGI 74
EE + K+ + L TE+ + L N E D + L + +D ++
Sbjct: 19 EEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVSKEWTKLVLDIAYDVEDV--- 75
Query: 75 LKEMKDFVHESEKVIYIFMISRITQQISGSS-SKDLFDALLGLQSQIIDIKQQLQQFRPN 133
+ + + EK ++ + R+T IS + ++ D + L+ + +D+ ++L+ +
Sbjct: 76 ---LDTYFLKLEKRLHRLGLMRLTNIISDKKDAYNILDDIKTLKRRTLDVTRKLEMY--- 129
Query: 134 TIGLWVELK-----SYFIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIV--GEPSLSVV 186
IG + E + S E R + S ++ +VGL D+ K LL L+ G+ + ++
Sbjct: 130 GIGNFNEHRVVASTSRVREVRRARS--DDQEERVVGLTDDAKVLLTKLLDDDGDNKIYMI 187
Query: 187 AIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW--VGCEYYLHKVLDNIIKSVMPRSMG 242
+I G G KT A + +NS+ +K F R W V E +L II S+ S G
Sbjct: 188 SIFGMEGLGKTSLARKLFNSSDVKESFEYRVWTNVSGECNTRDILMRIISSLEETSEG 245
>sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis
thaliana GN=RPP8L2 PE=1 SV=1
Length = 906
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 42 TSLLSNYENDMFQILFQSLGGEEEFDFSELQGILKEMKDFVHESEKVIYIFMISR--ITQ 99
T + N+ D+ I++ + E F +EL+G K +K V + + F++ R
Sbjct: 55 TERVRNFLEDVKDIVYDADDIIESFLLNELRGKEKGIKKQV----RTLACFLVDRRKFAS 110
Query: 100 QISGSSSKDLFDALLGLQSQIIDIKQQLQQFRPNTIGLW---VELKSYFIEARNSSSTAG 156
I G + K + + ++G+QS I Q + ++ L E++ F +RNS S
Sbjct: 111 DIEGIT-KRISEVIVGMQSLGI---QHIADGGGRSLSLQERQREIRQTF--SRNSES--- 161
Query: 157 SKKRNIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCR 216
++VGL+ ++EL+D L+ + S+ VV++ G G KT A + ++ + ++ +F
Sbjct: 162 ----DLVGLDQSVEELVDHLVEND-SVQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGF 216
Query: 217 AWVGC--EYYLHKVLDNIIKSVMPRSMGSEIMDK 248
+WV ++ V I++ + P G MD+
Sbjct: 217 SWVCVSQQFTRKDVWQRILQDLRPYDEGIIQMDE 250
>sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180 OS=Arabidopsis
thaliana GN=At1g50180 PE=3 SV=2
Length = 857
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 159 KRNIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW 218
+ N+VGLE +++L++ L+ G L V +I G G KT A + ++ + ++ +F AW
Sbjct: 161 EHNLVGLEQSLEKLVNDLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAW 220
Query: 219 V 219
V
Sbjct: 221 V 221
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 29 EQFQNLYTEIEIVTSLLSNYENDMFQILFQSLGGEE-EFDFSELQGILKEMKDFVHESEK 87
E F++ + E+ +LL + I + EE + ++ + E++D V+ +E
Sbjct: 23 EPFRSFFKRRELNENLLERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAED 82
Query: 88 VIYIFMISRITQQISG-SSSKDLFDALLG--------------LQSQIIDIKQQLQQF-- 130
+ + I SSS + L G L++++ + +L++
Sbjct: 83 ALDDIATEALRLNIGAESSSSNRLRQLRGRMSLGDFLDGNSEHLETRLEKVTIRLERLAS 142
Query: 131 RPNTIGLWVELKSYFIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIV---GEPSLSVVA 187
+ N +GL EL + I + +T+ + + G +D+ E++ LI + ++VVA
Sbjct: 143 QRNILGL-KELTA-MIPKQRLPTTSLVDESEVFGRDDDKDEIMRFLIPENGKDNGITVVA 200
Query: 188 IVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW--VGCEYYLHKVLDNIIKSVMPRSMGSEI 245
IVG G KT + YN ++++YF + W V E+ + K+ + +SV R E
Sbjct: 201 IVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTSRP--CEF 258
Query: 246 MDKD 249
D D
Sbjct: 259 TDLD 262
>sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1
PE=1 SV=1
Length = 926
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 161 NIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAWVG 220
++VG++ +L+ L+ EP VVA+VG G KT + + S ++ +F AWV
Sbjct: 171 SLVGIDAPKGKLIGRLLSPEPQRIVVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVT 230
Query: 221 C--EYYLHKVLDNIIK 234
Y + V +IK
Sbjct: 231 ISKSYVIEDVFRTMIK 246
>sp|Q8W4J9|RPP8_ARATH Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8
PE=1 SV=2
Length = 908
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 71 LQGILKEMKDFVHESEKVIYIFMISRITQQISG------------SSSKDLFDALLGLQS 118
++ L+++KD V ++E +I +++++++ + G + + + G+
Sbjct: 58 VRNFLEDVKDLVFDAEDIIESYVLNKLSGKGKGVKKHVRRLACFLTDRHKVASDIEGITK 117
Query: 119 QIIDIKQQLQQFRPNTI---GLWVELKSYFIEARNSSST-AGSKKRNIVGLEDEMKELLD 174
+I ++ ++Q F I G + L+ R T S + ++VG+E +KEL+
Sbjct: 118 RISEVIGEMQSFGIQQIIDGGRSLSLQERQRVQREIRQTYPDSSESDLVGVEQSVKELVG 177
Query: 175 LLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAWVGC--EYYLHKVLDNI 232
L+ + VV+I G G KT A + ++ + ++ +F AWV ++ V I
Sbjct: 178 HLVENDVH-QVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRI 236
Query: 233 IKSVMP 238
++ + P
Sbjct: 237 LQELQP 242
>sp|Q8W1E0|R1A_SOLDE Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3
SV=1
Length = 1293
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 113 LLGLQSQIIDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSKKRN--IVGLEDEMK 170
LL + +I IK ++Q+ NT VE + AR SS A + + N IVG ED ++
Sbjct: 499 LLDIIEEITCIKAKIQE--KNT----VEDTMKTVIARTSSKLARTPRMNEEIVGFEDVIE 552
Query: 171 ELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYN 205
L L+ G V++I G G KT A Y+
Sbjct: 553 NLRKKLLNGTKGQDVISIHGMPGLGKTTLANSLYS 587
>sp|Q6L3X3|R1B8_SOLDE Putative late blight resistance protein homolog R1B-8 OS=Solanum
demissum GN=R1B-8 PE=5 SV=1
Length = 1202
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 67 DFSELQGILKEMKDFVHESEKVIYIFMISRITQQISGSSSKDLFDALLGLQSQIIDIKQQ 126
+F LQ LK + + H K + QI S +D+ + +I IK +
Sbjct: 363 EFESLQPFLKVVAEEPHNKLKTLN----EDCATQIIRKSYEDIIE-------EITCIKAK 411
Query: 127 LQQFRPNTIGLWVELKSYFIEARNSSSTAGSKKRN--IVGLEDEMKELLDLLIVGEPSLS 184
+Q+ NT VE + AR SS A + + N IVG ED +++L + L+
Sbjct: 412 IQE--KNT----VEDTMKTVIARTSSQLARTLRMNEEIVGFEDVIEKLRNRLLNRTKGQD 465
Query: 185 VVAIVGSSGFDKTDFAGEAYN 205
V++I G G KT A Y+
Sbjct: 466 VISIHGMPGLGKTTLANRLYS 486
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 113 LLGLQSQIIDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSK--KRNIVGLEDEMK 170
LL + +I IK ++Q+ NT VE + AR SS A + K IVG ED ++
Sbjct: 481 LLDIIEEITCIKAKIQE--KNT----VEDTMKTVIARTSSKLARTPRMKEEIVGFEDVIE 534
Query: 171 ELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYF-YCRAWVGCEYYLHKVL 229
L L+ V++I G G KT A Y+ + + F +C + Y K
Sbjct: 535 NLRKKLLSRTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDFCAQCCVSQVYSCK-- 592
Query: 230 DNIIKSVMPRSMGSE 244
+++ S++ ++G E
Sbjct: 593 -DLLLSLLRDAIGEE 606
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 113 LLGLQSQIIDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSK--KRNIVGLEDEMK 170
LL + +I IK ++Q+ NT VE + AR SS A + K IVG ED ++
Sbjct: 481 LLDIIEEITCIKAKIQE--KNT----VEDTMKTVIARTSSKLARTPRMKEEIVGFEDVIE 534
Query: 171 ELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYF-YCRAWVGCEYYLHKVL 229
L L+ V++I G G KT A Y+ + + F +C + Y K
Sbjct: 535 NLRKKLLSRTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDFCAQCCVSQVYSCK-- 592
Query: 230 DNIIKSVMPRSMGSE 244
+++ S++ ++G E
Sbjct: 593 -DLLLSLLRDAIGEE 606
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 140 ELKSYFIEARNSSSTAGS--KKRNIVGLEDEMKELLDLLI---VGEPSLSVVAIVGSSGF 194
L+ IE + ++ GS + + G + E E++ +LI LSV+ I+G G
Sbjct: 127 HLQEKIIERQAATRETGSVLTEPQVYGRDKEKDEIVKILINTASDAQKLSVLPILGMGGL 186
Query: 195 DKTDFAGEAYNSNYMKNYFYCRAWVGC---EYYLHKVLDNIIKSVMPRSM 241
KT + +N + FY + W+ C ++ +++ I++S+ +S+
Sbjct: 187 GKTTLSQMVFNDQRVTERFYPKIWI-CISDDFNEKRLIKAIVESIEGKSL 235
>sp|B1YIB2|TRMFO_EXIS2 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=trmFO PE=3 SV=1
Length = 434
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 145 FIEARNSSSTAGSKKRNIVG-LEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEA 203
F E S+S ++ N VG L++EM++L D LI+ L+ V G+ D+ DFAG
Sbjct: 46 FAELVCSNSLRANQLTNAVGVLKEEMRQL-DSLIMKAADLASVPAGGALAVDRHDFAG-- 102
Query: 204 YNSNYMKNY 212
Y + +KN+
Sbjct: 103 YVTETLKNH 111
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 148 ARNSSSTAGSKKRN--IVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYN 205
AR SS A + + N IVG ED ++ L L+ V++I G G KT A Y+
Sbjct: 6 ARTSSKLARTPRMNEEIVGFEDVIENLRKKLLSETKGQDVISIHGMPGLGKTTLANRLYS 65
Query: 206 SNYMKNYF-YCRAWVGCEYYLHKVLDNIIKSVMPRSMGSE 244
+ + F C + Y +K +++ S++ ++G E
Sbjct: 66 DRSVVSQFDICAQCCVSQVYSYK---DLLLSLLRDAIGDE 102
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 162 IVGLEDEMKELLDLLIVG---EPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW 218
+ G + E E++ +LI LSV+ I+G G KT A +N + +F+ + W
Sbjct: 151 VYGRDKEKDEIVKILINNVSDAQHLSVLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKIW 210
Query: 219 VGC--EYYLHKVLDNIIKSVMPRSMGSEI 245
+ ++ +++ I++S+ R + E+
Sbjct: 211 ICVSEDFDEKRLIKAIVESIEGRPLLGEM 239
>sp|Q6L406|R1B19_SOLDE Putative late blight resistance protein homolog R1B-19 OS=Solanum
demissum GN=R1B-19 PE=5 SV=2
Length = 1326
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 119 QIIDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIV 178
+I IK ++Q+ NT+ +K+ + + + K IVG ED ++ L L+
Sbjct: 503 EITCIKAKIQE--KNTVD--DTMKTVIVRTSSKLARTPRMKEEIVGFEDIIENLRKKLLN 558
Query: 179 GEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYF-YCRAWVGCEYYLHKVLDNIIKSVM 237
G V++I G G KT A Y+ + + F C + Y +K +++ S++
Sbjct: 559 GTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYK---DLLLSLL 615
Query: 238 PRSMGSE 244
++G E
Sbjct: 616 CDTIGEE 622
>sp|Q49X36|TRMFO_STAS1 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trmFO PE=3 SV=1
Length = 435
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 145 FIEARNSSSTAGSKKRNIVG-LEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEA 203
F E S+S G+ N VG L++EM++L D LI+ + V G+ D+ DFAG
Sbjct: 47 FAELVCSNSLRGNALTNAVGVLKEEMRQL-DSLIISAADKARVPAGGALAVDRHDFAG-- 103
Query: 204 YNSNYMKNY 212
Y + +KN+
Sbjct: 104 YVTETLKNH 112
>sp|Q6L3Z4|R1B12_SOLDE Putative late blight resistance protein homolog R1B-12 OS=Solanum
demissum GN=R1B-12 PE=3 SV=2
Length = 1348
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 113 LLGLQSQIIDIKQQLQQFRPNTIGLWVELKSYFIEARNSSSTAGSKKRN--IVGLEDEMK 170
LL + +I IK +Q+ NT VE + R SS + + N IVG ED ++
Sbjct: 522 LLDIIEEITCIKANIQE--KNT----VEDTMKTVIGRTSSQLTRTPRMNEEIVGFEDVIE 575
Query: 171 ELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYF-YCRAWVGCEYYLHKVL 229
L L+ G V++I G G KT A Y+ + + F C + Y +K L
Sbjct: 576 NLRKKLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKEL 635
>sp|Q9NGP5|ABCG2_DICDI ABC transporter G family member 2 OS=Dictyostelium discoideum
GN=abcG2 PE=1 SV=2
Length = 1328
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 135 IGLWVELKSYFIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGF 194
+GL+ E K ++ ARN S + G++K+ D+ L DL +P S+V I+GS G
Sbjct: 42 MGLYKEKKGMYVTARNLSMSIGTEKKG-----DKRNILSDLNFFLKPG-SMVLILGSPGC 95
Query: 195 DKT 197
KT
Sbjct: 96 GKT 98
>sp|Q9C509|SGPL_ARATH Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980
PE=2 SV=1
Length = 544
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 131 RPNTI--GLWVELKSYFIEA--RNSSSTAGSKKRNIVGLEDEMKELLDLLIVGEPSLSVV 186
RP ++ G W + S E +N+S + KR LE+ ++E+ +L ++G+P +++V
Sbjct: 392 RPGSLVAGAWAAMMSLGEEGYLQNTSKIMEASKR----LEEGVREIHELFVIGKPDMTIV 447
Query: 187 AIVGSSGFD 195
A GS D
Sbjct: 448 AF-GSKALD 455
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 162 IVGLEDEMKELLDLLIVG---EPSLSVVAIVGSSGFDKTDFAGEAYNSNYMKNYFYCRAW 218
+ G E E E++ +LI + V+ I+G G KT A +N + +F + W
Sbjct: 151 VYGREKEEDEIVKILINNVSYSEEVPVLPILGMGGLGKTTLAQMVFNDQRITEHFNLKIW 210
Query: 219 VGC--EYYLHKVLDNIIKSVMPRSMG 242
V ++ +++ I++S+ +S+G
Sbjct: 211 VCVSDDFDEKRLIKAIVESIEGKSLG 236
>sp|Q8CPH2|TRMFO_STAES Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trmFO PE=3 SV=1
Length = 435
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 145 FIEARNSSSTAGSKKRNIVG-LEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEA 203
F E S+S G+ N VG L++EM+ L D LI+ + V G+ D+ DFAG
Sbjct: 47 FAELVCSNSLRGNALTNAVGVLKEEMRHL-DSLIITSADKARVPAGGALAVDRHDFAG-- 103
Query: 204 YNSNYMKNY 212
Y ++ ++N+
Sbjct: 104 YITDTLRNH 112
>sp|Q5HPU1|TRMFO_STAEQ Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trmFO PE=3 SV=1
Length = 435
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 145 FIEARNSSSTAGSKKRNIVG-LEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAGEA 203
F E S+S G+ N VG L++EM+ L D LI+ + V G+ D+ DFAG
Sbjct: 47 FAELVCSNSLRGNALTNAVGVLKEEMRHL-DSLIITSADKARVPAGGALAVDRHDFAG-- 103
Query: 204 YNSNYMKNY 212
Y ++ ++N+
Sbjct: 104 YITDTLRNH 112
>sp|Q8CHN6|SGPL1_RAT Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus GN=Sgpl1 PE=2
SV=1
Length = 568
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 165 LEDEMKELLDLLIVGEPSLSVVAIVGSSGFD----KTDFAGEAYNSNYMK 210
L+ E++ + ++ I+G+P LSV+A+ GS+ FD + + +N NY++
Sbjct: 430 LKSELENIKNIFILGDPQLSVIAL-GSNDFDIYRLSNMMSAKGWNFNYLQ 478
>sp|Q8ST66|ABCGI_DICDI ABC transporter G family member 18 OS=Dictyostelium discoideum
GN=abcG18 PE=3 SV=1
Length = 1476
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 143 SYFIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKT 197
S F+ ARN SST G K +E K L DL +P S+V ++GS G KT
Sbjct: 66 SVFVSARNLSSTVGHGK-------NEKKILTDLNFFLKPG-SMVLLLGSPGCGKT 112
>sp|O59742|CLU_SCHPO Clustered mitochondria protein homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=clu1 PE=3 SV=3
Length = 1173
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 40 IVTSLLSNYENDMFQILFQSLGGEEEFDFSE-LQGILKEMKDFVH-------ESEKVIYI 91
IV + EN +++ + GE +F F E +G L + D +H + ++ +
Sbjct: 473 IVPGIFKQLENGSSHLIYGKVEGESDFRFDESFEGELSRISDLLHIKKHFFVDGKEKSFP 532
Query: 92 FMISRITQQISGSSSK----DLFDALLGLQSQIIDI------------KQQLQQFRPNTI 135
S + + GS + DL+ +L L +Q +++ +L RP +
Sbjct: 533 LYTSMDAKALKGSDGRTYLMDLY-SLFPLDAQFLEVISDEKNEEFPAYPHKLVHVRPELV 591
Query: 136 GLWVELKSYFIEARNSSSTAGSKKRNIVGLEDEMKEL 172
L+ E+K ++A +++ KK+N L D +K +
Sbjct: 592 QLFYEMK---LQAFVNANHNAPKKKN---LNDSLKSV 622
>sp|B9DPG3|TRMFO_STACT Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Staphylococcus carnosus (strain TM300) GN=trmFO PE=3
SV=1
Length = 436
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 145 FIEARNSSSTAGSKKRNIVGLEDEMKELLDLLIVGEPSLSVVAIVGSSGFDKTDFAG 201
F E S+S G+ N VG+ E LD LI+ + V G+ D+ DFAG
Sbjct: 48 FAELVCSNSLRGNSLTNAVGVLKEEMRRLDSLIIKAADAARVPAGGALAVDRHDFAG 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,076,440
Number of Sequences: 539616
Number of extensions: 3865356
Number of successful extensions: 12083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 12056
Number of HSP's gapped (non-prelim): 72
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)