BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038696
(683 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 120/256 (46%), Gaps = 27/256 (10%)
Query: 253 LWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRD 311
L LG+S + E+ + +L+HPNI+ L G + ++ME + D
Sbjct: 52 LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGD 107
Query: 312 LCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKK--IYHGNLNPSNILLKPRGA 369
L + + K P V + LML IA G+EY+ ++ I H +L NI L+
Sbjct: 108 LYHRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 370 STEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK 429
+ + AK++ FGLS S SG F W APE + E++ Y+EK
Sbjct: 163 NAP--VCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEES-------YTEK 208
Query: 430 SDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR-AGERPLFPFHSPKYVTNLTKRCWH 488
+D YSF MI + ILTG+ PF++ K IR G RP P P + N+ + CW
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 489 ADPNQRPSFSSICRIL 504
DP +RP FS I + L
Sbjct: 269 GDPKKRPHFSYIVKEL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 27/256 (10%)
Query: 253 LWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRD 311
L LG+S + E+ + +L+HPNI+ L G + ++ME + D
Sbjct: 52 LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGD 107
Query: 312 LCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKK--IYHGNLNPSNILLKPRGA 369
L + + K P V + LML IA G+EY+ ++ I H +L NI L+
Sbjct: 108 LYHRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 370 STEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK 429
+ + AK++ FG S S SG F W APE + E++ Y+EK
Sbjct: 163 NAP--VCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEES-------YTEK 208
Query: 430 SDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR-AGERPLFPFHSPKYVTNLTKRCWH 488
+D YSF MI + ILTG+ PF++ K IR G RP P P + N+ + CW
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 489 ADPNQRPSFSSICRIL 504
DP +RP FS I + L
Sbjct: 269 GDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 27/256 (10%)
Query: 253 LWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRD 311
L LG+S + E+ + +L+HPNI+ L G + ++ME + D
Sbjct: 52 LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGD 107
Query: 312 LCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKK--IYHGNLNPSNILLKPRGA 369
L + + K P V + LML IA G+EY+ ++ I H +L NI L+
Sbjct: 108 LYHRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 370 STEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK 429
+ + AK++ F LS S SG F W APE + E++ Y+EK
Sbjct: 163 NAP--VCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEES-------YTEK 208
Query: 430 SDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR-AGERPLFPFHSPKYVTNLTKRCWH 488
+D YSF MI + ILTG+ PF++ K IR G RP P P + N+ + CW
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 489 ADPNQRPSFSSICRIL 504
DP +RP FS I + L
Sbjct: 269 GDPKKRPHFSYIVKEL 284
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I+E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIIIEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I+E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIIIEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 19 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 78 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 131
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 132 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 184 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 232
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 15 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I+E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 74 QLLGVCTREPP--FYIIIEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 127
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 128 LEKKNFIHRDLAARNCLV------GENHL-VKVADFGLSRLMT-GDTXTAHAGAKFPIKW 179
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 180 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 228
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 221 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 280 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 333
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H NL N L+ E +L K++ FGLS + G + +G P W
Sbjct: 334 LEKKNFIHRNLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 385
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 386 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 434
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 40/277 (14%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 12 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I+E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 71 QLLGVCTREPP--FYIIIEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 124
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 125 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTXTAHAGAKFPIKW 176
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFE--DAHLQGDKMSRNI 463
APE L N K+S KSDV++FG++ +EI T G P+ D + + ++
Sbjct: 177 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R ERP P+ V L + CW +P+ RPSF+ I
Sbjct: 228 RM-ERPE---GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 231 LIKSEDYQVRRRLGSGS--QYKEILWLGESFALRHFFGDIE--PLVPEISSLLSLSHPNI 286
+I ++ +V +G G+ + W + A++ + E + E+ L ++HPNI
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 287 MHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPV-AVDLMLQIARGME 345
+ + L+ME + + + +P+ A+ LQ ++G+
Sbjct: 64 VKLYGACLNP----VCLVMEYAEG---GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 346 YLHS---KKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
YLHS K + H +L P N+LL ++G + + +FG Q+ T+
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLL--------------VAGGTVLKICDFGTACDIQTHMTN 162
Query: 403 ---PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKM 459
W APEV E S YSEK DV+S+G+I +E++T + PF++ ++
Sbjct: 163 NKGSAAWMAPEVFE---------GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213
Query: 460 SRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRF 510
+ G RP + PK + +L RCW DP+QRPS I +I+ ++ R+
Sbjct: 214 MWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 231 LIKSEDYQVRRRLGSGS--QYKEILWLGESFALRHFFGDIE--PLVPEISSLLSLSHPNI 286
+I ++ +V +G G+ + W + A++ + E + E+ L ++HPNI
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 287 MHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPV-AVDLMLQIARGME 345
+ + L+ME + + + +P+ A+ LQ ++G+
Sbjct: 65 VKLYGACLNP----VCLVMEYAEG---GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 346 YLHS---KKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
YLHS K + H +L P N+LL ++G + + +FG Q+ T+
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLL--------------VAGGTVLKICDFGTACDIQTHMTN 163
Query: 403 ---PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKM 459
W APEV E S YSEK DV+S+G+I +E++T + PF++ ++
Sbjct: 164 NKGSAAWMAPEVFE---------GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 214
Query: 460 SRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRF 510
+ G RP + PK + +L RCW DP+QRPS I +I+ ++ R+
Sbjct: 215 MWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 19 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I+E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 78 QLLGVCTREPP--FYIIIEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 131
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 132 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 184 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 232
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
+ + E S + L H N++ L G EEK +++ E M++ L Y++ R R
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRS----RGRSV 113
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ L + MEYL H +L N+L+ AK+S FGL+
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-------AKVSDFGLTK- 165
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S +Q P W APE L E K+S KSDV+SFG++ +EI + G+
Sbjct: 166 ----EASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYSFGR 212
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ L+ D + R + G + P P V + K CWH D RPSF + L +
Sbjct: 213 VPYPRIPLK-DVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270
Query: 507 IK 508
IK
Sbjct: 271 IK 272
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
+ + E S + L H N++ L G EEK +++ E M++ L Y++ R R
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRS----RGRSV 98
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ L + MEYL H +L N+L+ AK+S FGL+
Sbjct: 99 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-------AKVSDFGLTK- 150
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S +Q P W APE L E K+S KSDV+SFG++ +EI + G+
Sbjct: 151 ----EASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYSFGR 197
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ L+ D + R + G + P P V + K CWH D RPSF + L +
Sbjct: 198 VPYPRIPLK-DVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 255
Query: 507 IK 508
IK
Sbjct: 256 IK 257
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 19 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 78 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 131
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 132 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTXTAHAGAKFPIKW 183
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 184 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 232
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 19 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 78 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 131
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 132 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 184 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 232
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 16 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 75 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 128
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 129 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 180
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 181 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 229
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 27 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 86 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 139
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 140 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 191
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 192 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 240
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 241 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 16 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 75 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 128
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 129 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 180
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 181 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 229
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 218 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 277 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 330
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H NL N L+ E +L K++ FGLS + G + +G P W
Sbjct: 331 LEKKNFIHRNLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 382
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 383 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 431
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 432 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 14 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 73 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 126
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 127 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 178
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 179 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 227
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 133/279 (47%), Gaps = 41/279 (14%)
Query: 244 GSGSQYKEILWLGESFALRHFFGD--------IEPLVPEISSLLSLSHPNIMHFLCGFTD 295
G G Y+ W+G+ A++ D IE + E L HPNI+ L G
Sbjct: 19 GFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA-LRGVCL 76
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIY-- 353
+E C L+ME + + KRIP + V+ +QIARGM YLH + I
Sbjct: 77 KEPNLC-LVMEFARGGPLNRV----LSGKRIPPD--ILVNWAVQIARGMNYLHDEAIVPI 129
Query: 354 -HGNLNPSNILLKPR---GASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAP 409
H +L SNIL+ + G + L KI+ FGL+ + K S +G + W AP
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKIL--KITDFGLAREWHRTTKM-SAAGA---YAWMAP 183
Query: 410 EVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERP 469
EV+ S +S+ SDV+S+G++ +E+LTG+VPF + G ++ + +
Sbjct: 184 EVIRA---------SMFSKGSDVWSYGVLLWELLTGEVPFRG--IDGLAVAYGVAMNKLA 232
Query: 470 L-FPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
L P P+ L + CW+ DP+ RPSF++I L I
Sbjct: 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 19 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 78 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 131
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 132 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 183
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 184 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 232
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 40/277 (14%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 12 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 71 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 124
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 125 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTFTAHAGAKFPIKW 176
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFE--DAHLQGDKMSRNI 463
APE L N K+S KSDV++FG++ +EI T G P+ D + + ++
Sbjct: 177 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R ERP P+ V L + CW +P+ RPSF+ I
Sbjct: 228 RM-ERPE---GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 18 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 77 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 130
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 131 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 182
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 183 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 231
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 260 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 319 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 372
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H NL N L+ E +L K++ FGLS + G + +G P W
Sbjct: 373 LEKKNFIHRNLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 424
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 425 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 473
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 474 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 15 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 74 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 127
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 128 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAPAGAKFPIKW 179
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 180 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEK 228
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVFEFMEHGCLSDYLR-----TQRGL 99
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 152
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 153 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 203 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAA 260
Query: 507 I 507
I
Sbjct: 261 I 261
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 16 DITMKHKLGGG-QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 75 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--NAVVLLYMATQISSAMEY 128
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 129 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTYTAPAGAKFPIKW 180
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N K+S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 181 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK 229
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R P P+ V L + CW +P+ RPSF+ I
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 40/277 (14%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G Q+ E+ +W S L+ ++E + E + + + HPN++
Sbjct: 12 DITMKHKLGGG-QFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E ++I E M+ +L Y++E C R+ + S V + + QI+ MEY
Sbjct: 71 QLLGVCTREPP--FYIITEFMTYGNLLDYLRE--CNRQEV--SAVVLLYMATQISSAMEY 124
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ E +L K++ FGLS + G + +G P W
Sbjct: 125 LEKKNFIHRDLAARNCLVG------ENHL-VKVADFGLSRLMT-GDTXTAHAGAKFPIKW 176
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFE--DAHLQGDKMSRNI 463
APE L N K+S KSDV++FG++ +EI T G P+ D + + ++
Sbjct: 177 TAPESLAYN---------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
R ERP P+ V L + CW +P+ RPSF+ I
Sbjct: 228 RM-ERPE---GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
+ + E S + L H N++ L G EEK +++ E M++ L Y++ R R
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRS----RGRSV 285
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ L + MEYL H +L N+L+ AK+S FGL+
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-------AKVSDFGLTK- 337
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S +Q P W APE L E K+S KSDV+SFG++ +EI + G+
Sbjct: 338 ----EASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYSFGR 384
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ L+ D + R + G + P P V ++ K CWH D RP+F + L +
Sbjct: 385 VPYPRIPLK-DVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442
Query: 507 IK 508
I+
Sbjct: 443 IR 444
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
+ + E S + L H N++ L G EEK +++ E M++ L Y++ R R
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRS----RGRSV 104
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ L + MEYL H +L N+L+ AK+S FGL+
Sbjct: 105 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-------AKVSDFGLTK- 156
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S +Q P W APE L E + +S KSDV+SFG++ +EI + G+
Sbjct: 157 ----EASSTQDTGKLPVKWTAPEALRE---------AAFSTKSDVWSFGILLWEIYSFGR 203
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ L+ D + R + G + P P V + K CWH D RPSF + L +
Sbjct: 204 VPYPRIPLK-DVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 261
Query: 507 IK 508
IK
Sbjct: 262 IK 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVFEFMEHGCLSDYLR-----TQRGL 102
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 103 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 155
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 156 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 205
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 206 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263
Query: 507 I 507
I
Sbjct: 264 I 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVTEFMEHGCLSDYLR-----TQRGL 100
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 101 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 153
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 154 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 203
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 204 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261
Query: 507 I 507
I
Sbjct: 262 I 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVFEFMEHGCLSDYLR-----TQRGL 97
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 98 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 150
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 151 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 200
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 201 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258
Query: 507 I 507
I
Sbjct: 259 I 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVFEFMEHGCLSDYLR-----TQRGL 99
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 152
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 153 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 203 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 260
Query: 507 I 507
I
Sbjct: 261 I 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 27/230 (11%)
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
SHPNI+ + T +K+ +++MEL+ D ++++ R R+ L + D
Sbjct: 170 SHPNIVRLIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGD----A 222
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
A GMEYL SK H +L N L+ + KIS FG+S + G + S
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNV-------LKISDFGMSREEADGVXAASGGLR 275
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKM 459
P W APE L + +YS +SDV+SFG++ +E + G P+ + L +
Sbjct: 276 QVPVKWTAPEAL---------NYGRYSSESDVWSFGILLWETFSLGASPYPN--LSNQQT 324
Query: 460 SRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
+ G R P P V L ++CW +P QRPSFS+I + L+ I++
Sbjct: 325 REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E ++ LSHP ++ L G E+ C L+ E M L Y++ +R
Sbjct: 67 DDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAPIC-LVFEFMEHGCLSDYLR-----TQRGL 119
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+ + + L + GM YL + H +L N L+ K+S FG++
Sbjct: 120 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-------IKVSDFGMTRF 172
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S +GT P W +PEV S S+YS KSDV+SFG++ +E+ + GK
Sbjct: 173 V-LDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGK 222
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+P+E+ ++ +I G R P + +V + CW P RP+FS + R L
Sbjct: 223 IPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 280
Query: 507 I 507
I
Sbjct: 281 I 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGE-----SFALRHF---FGDIEPLVPEISSLLSLSH 283
I E ++ ++LG+G Q+ E+ W+ A++ +E + E + + +L H
Sbjct: 12 IPRESLKLEKKLGAG-QFGEV-WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH 69
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T K+ ++I E M++ L ++K ++ LP +D QIA
Sbjct: 70 DKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAE 122
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ V + ++ G
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVS-------ASLVCKIADFGLARVIEDNEYT-AREGAKF 174
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ R
Sbjct: 175 PIKWTAPEAI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPY--PGMSNPEVIR 223
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
+ G R P + P+ + N+ RCW P +RP+F I +L
Sbjct: 224 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPV 332
E L SHPNI+ + T +K+ +++MEL+ D ++++ R R+ L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQM 218
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
D A GMEYL SK H +L N L+ + KIS FG+S + G
Sbjct: 219 VGD----AAAGMEYLESKCCIHRDLAARNCLVTEKNV-------LKISDFGMSREEADGV 267
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+ S P W APE L + +YS +SDV+SFG++ +E + G P+ +
Sbjct: 268 YAASGGLRQVPVKWTAPEAL---------NYGRYSSESDVWSFGILLWETFSLGASPYPN 318
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
L + + G R P P V L ++CW +P QRPSFS+I + L+ I++
Sbjct: 319 --LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGE-----SFALRHF---FGDIEPLVPEISSLLSLSH 283
I E ++ ++LG+G Q+ E+ W+ A++ +E + E + + +L H
Sbjct: 185 IPRESLKLEKKLGAG-QFGEV-WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH 242
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T K+ ++I E M++ L ++K ++ LP +D QIA
Sbjct: 243 DKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAE 295
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ V + ++ G
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSAS-------LVCKIADFGLARVIEDNEYT-AREGAKF 347
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ R
Sbjct: 348 PIKWTAPEAI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPY--PGMSNPEVIR 396
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
+ G R P + P+ + N+ RCW P +RP+F I +L
Sbjct: 397 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 48 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 100
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 153
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 154 V-LDDEYTSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 203
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 204 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 101
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 154
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 155 V-LDDEYTSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 205 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 101
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 154
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 155 V-LDDEYTSSRGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 205 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 44 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 96
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 149
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 150 V-LDDEYTSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 199
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 200 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P ++ + Q+ARGME+L S+K H +L NILL KI FGL+
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV-------VKICDFGLAR 247
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
P + T P W AP ES + YS KSDV+S+G++ +EI + G
Sbjct: 248 DIYKNPDYVRKGDTRLPLKWMAP---------ESIFDKIYSTKSDVWSYGVLLWEIFSLG 298
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + D SR +R G R P +S + + CWH DP +RP F+ + L
Sbjct: 299 GSPYPGVQMDEDFCSR-LREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 55 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 107
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 161 V-LDDEYTSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 211 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 48/283 (16%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGE-----SFALRHF---FGDIEPLVPEISSLLSLSH 283
I E ++ ++LG+G Q+ E+ W+ A++ +E + E + + +L H
Sbjct: 179 IPRESLKLEKKLGAG-QFGEV-WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH 236
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T K+ ++I E M++ L ++K ++ LP +D QIA
Sbjct: 237 DKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAE 289
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ V G
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVS-------ASLVCKIADFGLARV-----------GAKF 331
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ R
Sbjct: 332 PIKWTAPEAI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPY--PGMSNPEVIR 380
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
+ G R P + P+ + N+ RCW P +RP+F I +L
Sbjct: 381 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 116
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 169
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 170 V-LDDEETSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 220 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
+ + E +++LSH ++ T +++ F+I E M+ L +Y++E+ R
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEYMANGCLLNYLREM-----RHR 116
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F +++ + MEYL SK+ H +L N L+ +G K+S FGLS
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-------VKVSDFGLSRY 169
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ S G+ P W PEVL SK+S KSD+++FG++ +EI + GK
Sbjct: 170 V-LDDEYTSSVGSKFPVRWSPPEVL---------MYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+P+E + + +I G R P + + V + CWH ++RP+F
Sbjct: 220 MPYE--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 126/282 (44%), Gaps = 51/282 (18%)
Query: 234 SEDYQVRRRLGSGSQYKEILWLGESFALRHFFGDIE-------------PLVPEISSLLS 280
SE YQ ++LGSG+ Y E+L + + H I+ L+ E++ L
Sbjct: 36 SEMYQRVKKLGSGA-YGEVLLCRDK--VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL 92
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNIM F E+K+ +L+ME EI R+ F+ A ++ Q+
Sbjct: 93 LDHPNIMKLYDFF--EDKRNYYLVMECYKG--GELFDEII---HRMKFNEVDAAVIIKQV 145
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ YLH I H +L P N+LL+ S E KI FGLS+V K + GT
Sbjct: 146 LSGVTYLHKHNIVHRDLKPENLLLE----SKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ + APEVL + KY EK DV+S G+I F +L G PF G
Sbjct: 202 AY---YIAPEVLRK----------KYDEKCDVWSIGVILFILLAGYPPF-----GGQTDQ 243
Query: 461 RNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQRPS 496
+R E+ + F SP++ +L K+ D +R S
Sbjct: 244 EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS 285
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 40/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 16 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 73
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 74 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 126
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEXT-AREGAKF 178
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 179 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 227
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
N+ G R + P + P+ + L + CW P RP+F + +L F Y QP
Sbjct: 228 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF--FTATEGQYQPQP 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 40/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 18 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 75
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 76 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 128
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEXT-AREGAKF 180
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 181 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 229
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
N+ G R + P + P+ + L + CW P RP+F + +L F Y QP
Sbjct: 230 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF--FTATEGQYQPQP 287
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 36/273 (13%)
Query: 236 DYQVRRRLGSGSQYKEI---LWLGESFA-----LRHFFGDIEPLVPEISSLLSLSHPNIM 287
D ++ +LG G QY E+ +W S L+ ++E + E + + + HPN++
Sbjct: 33 DITMKHKLGGG-QYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
L T E +++ E M +L Y++E C R+ + + V + + QI+ MEY
Sbjct: 92 QLLGVCTLEPP--FYIVTEYMPYGNLLDYLRE--CNREEV--TAVVLLYMATQISSAMEY 145
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
L K H +L N L+ K++ FGLS + G + +G P W
Sbjct: 146 LEKKNFIHRDLAARNCLVGENHV-------VKVADFGLSRLMT-GDTYTAHAGAKFPIKW 197
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRA 465
APE L N +S KSDV++FG++ +EI T G P+ L ++ +
Sbjct: 198 TAPESLAYN---------TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYDLLEK 246
Query: 466 GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
G R P P V L + CW P RPSF+
Sbjct: 247 GYRMEQPEGCPPKVYELMRACWKWSPADRPSFA 279
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 40/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 10 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 68 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEXT-AREGAKF 172
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 173 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 221
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
N+ G R + P + P+ + L + CW P RP+F + +L F Y QP
Sbjct: 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF--FTATEGQYQPQP 279
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 40/296 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGE-----SFALRHFF-GDIEP--LVPEISSLLSLSH 283
I E Q+ +RLG+G Q+ E+ W+G A++ G + P + E + L H
Sbjct: 6 IPRESLQLIKRLGNG-QFGEV-WMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKH 63
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ ++E +++ E M++ L ++K+ + LP VD+ Q+A
Sbjct: 64 DKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKD----GEGRALKLPNLVDMAAQVAA 116
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM Y+ H +L +NIL+ L KI+ FGL+ + + Q G
Sbjct: 117 GMAYIERMNYIHRDLRSANILVG-------NGLICKIADFGLARLIEDNEXTARQ-GAKF 168
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W AP E+A +++ KSDV+SFG++ E++T G+VP+ + ++
Sbjct: 169 PIKWTAP---------EAALYGRFTIKSDVWSFGILLTELVTKGRVPY--PGMNNREVLE 217
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHY 517
+ G R P P + L CW DP +RP+F + L F P Y
Sbjct: 218 QVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE--DYFTATEPQY 271
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG--------ESFALRHFFGDIEPLVPEISSLLSLSH 283
I E ++ +RLG+G Q+ E+ W+G L+ ++ + E + + +L H
Sbjct: 10 IPRESIKLVKRLGAG-QFGEV-WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T EE ++I E M++ L ++K + LP +D QIA
Sbjct: 68 DKLVRLYAVVTREEP--IYIITEYMAKGSLLDFLKS----DEGGKVLLPKLIDFSAQIAE 121
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM Y+ K H +L +N+L+ L KI+ FGL+ V + ++ G
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSES-------LMCKIADFGLARVIE-DNEYTAREGAKF 173
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ +EI+T GK+P+ D M+
Sbjct: 174 PIKWTAPEAI---------NFGCFTIKSDVWSFGILLYEIVTYGKIPYP-GRTNADVMT- 222
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
+ G R + P + ++ K CW +RP+F + +L + Y QP
Sbjct: 223 ALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLD--DFYTATEGQYQQQP 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q ARGM+YLH+K I H +L +NI L KI FGL++V
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-------VKIGDFGLATV 157
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ + ++ YS +SDVY+FG++ +E++TG++
Sbjct: 158 KSRWSGSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELMTGQL 211
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R P + PK + L C ++RPSF I +
Sbjct: 212 PYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 271
Query: 505 RYIKR 509
+ R
Sbjct: 272 EELAR 276
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI+H L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIHLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 196 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 40/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHF-FGDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 20 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 77
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 78 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 130
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEYT-AREGAKF 182
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 183 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 231
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
N+ G R + P + P+ + L + CW P RP+F + +L F Y QP
Sbjct: 232 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF--FTATEGQYQPQP 289
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 6 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 63
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K P I ++ +D+ QIA
Sbjct: 64 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLK---TPSG-IKLTINKLLDMAAQIAE 116
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H NL +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDT-------LSCKIADFGLARLIE-DNEYTAREGAKF 168
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 169 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 217
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 218 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 40/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q E+ W+G A++ G + P + E + + L H
Sbjct: 10 VPRETLKLVERLGAG-QAGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 68 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIE-DAEXTAREGAKF 172
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 173 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 221
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
N+ G R + P + P+ + L + CW P RP+F + +L F Y QP
Sbjct: 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF--FTATEGQYQPQP 279
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+ TE
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV------TENN 194
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
+ KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 195 V-MKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+ TE
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV------TENN 194
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
+ KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 195 V-MKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 11 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 68
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K P I ++ +D+ QIA
Sbjct: 69 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLK---TPSG-IKLTINKLLDMAAQIAE 121
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIE-DNEXTAREGAKF 173
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 174 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 222
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 223 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 10 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K P I ++ +D+ QIA
Sbjct: 68 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLK---TPSG-IKLTINKLLDMAAQIAE 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIE-DNEXTAREGAKF 172
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 173 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 221
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 12 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 69
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 70 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 122
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEXT-AREGAKF 174
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 175 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 223
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 224 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 19 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 76
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 77 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 129
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEXT-AREGAKF 181
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 182 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 230
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 231 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 15 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 73 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 125
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEYT-AREGAKF 177
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 178 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 226
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 227 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 16 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 73
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K I ++ +D+ QIA
Sbjct: 74 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAE 126
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIEDNEYT-AREGAKF 178
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 179 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 227
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 228 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICC 321
R F G E S + HPNI+ L G + K + + + L S+++
Sbjct: 62 RDFLG-------EASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR---- 109
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 110 -KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVSD 161
Query: 382 FGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICF 440
FGLS V P++ + G P W +PE + + K++ SDV+S+G++ +
Sbjct: 162 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVLW 212
Query: 441 EILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSS 499
E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 213 EVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 270
Query: 500 ICRILRYIKRFIMMNPH-----YNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + R NP ++ P L+D S+++ R W
Sbjct: 271 IVSILDKLIR----NPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 39/300 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG--------ESFALRHFFGDIEPLVPEISSLLSLSH 283
I E ++ ++LG+G Q+ E+ W+G L+ ++ + E + + +L H
Sbjct: 9 IPRESIKLVKKLGAG-QFGEV-WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH 66
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T EE ++I E M++ L ++K + LP +D QIA
Sbjct: 67 DKLVRLYAVVTKEEP--IYIITEFMAKGSLLDFLKS----DEGGKVLLPKLIDFSAQIAE 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM Y+ K H +L +N+L+ L KI+ FGL+ V + ++ G
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSES-------LMCKIADFGLARVIE-DNEYTAREGAKF 172
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KS+V+SFG++ +EI+T GK+P+ D MS
Sbjct: 173 PIKWTAPEAI---------NFGCFTIKSNVWSFGILLYEIVTYGKIPYP-GRTNADVMSA 222
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQP 521
+ P + P + ++ K CW +RP+F + +L + Y QP
Sbjct: 223 LSQGYRMPRME-NCPDELYDIMKMCWKEKAEERPTFDYLQSVLD--DFYTATEGQYQQQP 279
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 10 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K P I ++ +D+ QIA
Sbjct: 68 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLK---TPSG-IKLTINKLLDMAAQIAE 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIE-DNEYTAREGAKF 172
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 173 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 221
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
E + SH NI+ L G + K + + + L +++E K FS+
Sbjct: 96 EAGIMGQFSHHNIIR-LEGVISKYKPMMIITEYMENGALDKFLRE-----KDGEFSVLQL 149
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
V ++ IA GM+YL + H +L NIL+ L K+S FGLS V P+
Sbjct: 150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN-------LVCKVSDFGLSRVLEDDPE 202
Query: 394 SP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+ + SG P W APE + S K++ SDV+SFG++ +E++T G+ P+ +
Sbjct: 203 ATYTTSGGKIPIRWTAPEAI---------SYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFI 511
L ++ + I G R P P + L +CW + +RP F+ I IL + R
Sbjct: 254 --LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR-- 309
Query: 512 MMNPHYNSQPDPPMPLVDYSDIESRLLRKFPS 543
P L +D + R+ + PS
Sbjct: 310 -----------APDSLKTLADFDPRVSIRLPS 330
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLG-----ESFALRHFF-GDIEP--LVPEISSLLSLSH 283
+ E ++ RLG+G Q+ E+ W+G A++ G + P + E + + L H
Sbjct: 5 VPRETLKLVERLGAG-QFGEV-WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH 62
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
++ T E ++I E M L ++K P I ++ +D+ QIA
Sbjct: 63 QRLVRLYAVVTQEP---IYIITEYMENGSLVDFLK---TPSG-IKLTINKLLDMAAQIAE 115
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
GM ++ + H +L +NIL+ L KI+ FGL+ + + ++ G
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDT-------LSCKIADFGLARLIE-DNEYTAREGAKF 167
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSR 461
P W APE + + ++ KSDV+SFG++ EI+T G++P+ + ++ +
Sbjct: 168 PIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQ 216
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
N+ G R + P + P+ + L + CW P RP+F + +L
Sbjct: 217 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 28/212 (13%)
Query: 302 FLIMELMSRDLCSYIKEIC--------CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIY 353
L M M++D + + + C + F + +D+ Q A+GM+YLH+K I
Sbjct: 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNII 154
Query: 354 HGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLE 413
H ++ +NI L EG L KI FGL++VK+ S T +W APEV+
Sbjct: 155 HRDMKSNNIFLH------EG-LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDK-----MSRNIRAGER 468
+ N+ +S +SDVYS+G++ +E++TG++P+ +H+ + R + +
Sbjct: 208 MQD------NNPFSFQSDVYSYGIVLYELMTGELPY--SHINNRDQIIFMVGRGYASPDL 259
Query: 469 PLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ PK + L C +RP F I
Sbjct: 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 79 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 126
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 127 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 177
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 228
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 229 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 286
Query: 499 SICRILRYIKRFIMMNPH-----YNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + R NP ++ P L+D S+++ R W
Sbjct: 287 QIVSILDKLIR----NPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 333
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 62 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 109
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 110 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 160
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 211
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 212 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 269
Query: 499 SICRILRYIKRFIMMNPH-----YNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + R NP ++ P L+D S+++ R W
Sbjct: 270 QIVSILDKLIR----NPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 316
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 34/286 (11%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICC 321
R F G E S + HPNI+ L G + K + + + L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR---- 138
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 -KHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSN-------LVCKVSD 190
Query: 382 FGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICF 440
FGLS V P++ + G P W +PE + + K++ SDV+S+G++ +
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVLW 241
Query: 441 EILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSS 499
E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 242 EVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 500 ICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 300 IVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 123/281 (43%), Gaps = 48/281 (17%)
Query: 234 SEDYQVRRRLGSGSQYKEILW-----LGESFALRHF-------FGDIEPLVPEISSLLSL 281
S+ YQ ++LGSG+ Y E+L G A++ + L+ E++ L L
Sbjct: 3 SDRYQRVKKLGSGA-YGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HPNIM F E+K+ +L+ME+ EI +K FS A +M Q+
Sbjct: 62 DHPNIMKLYEFF--EDKRNYYLVMEVYRGG--ELFDEIILRQK---FSEVDAAVIMKQVL 114
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
G YLH I H +L P N+LL+ + KI FGLS+ G K + GT
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESKSRDA----LIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ + APEVL + KY EK DV+S G+I + +L G PF G
Sbjct: 171 Y---YIAPEVLRK----------KYDEKCDVWSCGVILYILLCGYPPF-----GGQTDQE 212
Query: 462 NIRAGERPLFPFHSPKYVT------NLTKRCWHADPNQRPS 496
++ E+ F F P + L K +P++R S
Sbjct: 213 ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 70 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV----- 182
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 183 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 230
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 288
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 289 QRPTFKQLVEDLDRI 303
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
KI+ FGL+ N + + P W APE L + Y+ +SDV+S
Sbjct: 196 --MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEAL---------FDRVYTHQSDVWS 244
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 302
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 303 RPTFKQLVEDLDRI 316
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 34/286 (11%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICC 321
R F G E S + HPNI+ L G + K + + + L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR---- 138
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 -KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVSD 190
Query: 382 FGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICF 440
FGLS V P++ + G P W +PE + + K++ SDV+S+G++ +
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVLW 241
Query: 441 EILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSS 499
E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 242 EVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 500 ICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 300 IVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 196 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 47/287 (16%)
Query: 236 DYQVRRRLGSGS--QYKEILWLGESFALR-----HFFGD-IEPLVPEISSLLSLSHPNIM 287
D ++ ++G+GS W G A++ F + + + E++ + L HPNI+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 288 HFLCGFTDEEKKECFLIMELMSRDLC------SYIKEICCPRKRIPFSLPVAVDLMLQIA 341
F+ T + ++ E +SR S +E R+R+ + +A
Sbjct: 98 LFMGAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL--------SMAYDVA 147
Query: 342 RGMEYLHSKK--IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK-NFGPKSPSQS 398
+GM YLH++ I H NL N+L+ + K+ FGLS +K + S S +
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKK-------YTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDK 458
GT W APEVL + +EKSDVYSFG+I +E+ T + P+ + +
Sbjct: 201 GTPE---WMAPEVLRDEPS---------NEKSDVYSFGVILWELATLQQPWGNLNPAQVV 248
Query: 459 MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ + +R P + V + + CW +P +RPSF++I +LR
Sbjct: 249 AAVGFKC-KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q ARGM+YLH+K I H +L +NI L KI FGL++
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-------VKIGDFGLATE 169
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ + ++ YS +SDVY+FG++ +E++TG++
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R P + PK + L C ++RPSF I +
Sbjct: 224 PYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
Query: 505 RYIKR 509
+ R
Sbjct: 284 EELAR 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q ARGM+YLH+K I H +L +NI L KI FGL++
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-------VKIGDFGLATE 169
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ + ++ YS +SDVY+FG++ +E++TG++
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R P + PK + L C ++RPSF I +
Sbjct: 224 PYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
Query: 505 RYIKR 509
+ R
Sbjct: 284 EELAR 288
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ME MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVMEYMSKGCLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 48/282 (17%)
Query: 229 RILIKSEDYQVRRRLGSGSQYKEILWLGESFALRHFFG-------------DIEPLVPEI 275
+I +K ED+++ + LG GS K ++L E FF D+E + E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGK--VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 276 SSL-LSLSHPNIMHFLCGFTDEEKKECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVA 333
L L+ HP + H C F + K+ F +ME L DL +I+ C + F L A
Sbjct: 70 RVLSLAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQ--SCHK----FDLSRA 121
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+I G+++LHSK I + +L NILL G H KI+ FG+ G
Sbjct: 122 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-------HIKIADFGMCKENMLGDA 174
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
++ T +I APE+L KY+ D +SFG++ +E+L G+ PF H
Sbjct: 175 KTNEFCGTPDYI--APEIL---------LGQKYNHSVDWWSFGVLLYEMLIGQSPF---H 220
Query: 454 LQG-DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
Q +++ +IR + P +P K +L + + +P +R
Sbjct: 221 GQDEEELFHSIRM-DNPFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 75 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 132
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 187
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 188 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 235
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 293
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 294 QRPTFKQLVEDLDRI 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 89 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 136
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 137 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 187
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 238
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 239 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 296
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 297 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 343
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 72 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 129
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 184
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 185 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 232
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 290
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 291 QRPTFKQLVEDLDRI 305
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 123/281 (43%), Gaps = 48/281 (17%)
Query: 234 SEDYQVRRRLGSGSQYKEILW-----LGESFALRHF-------FGDIEPLVPEISSLLSL 281
S+ YQ ++LGSG+ Y E+L G A++ + L+ E++ L L
Sbjct: 20 SDRYQRVKKLGSGA-YGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HPNIM F E+K+ +L+ME+ EI +K FS A +M Q+
Sbjct: 79 DHPNIMKLYEFF--EDKRNYYLVMEVYRGG--ELFDEIILRQK---FSEVDAAVIMKQVL 131
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
G YLH I H +L P N+LL+ + KI FGLS+ G K + GT
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSRDA----LIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ + APEVL + KY EK DV+S G+I + +L G PF G
Sbjct: 188 Y---YIAPEVLRK----------KYDEKCDVWSCGVILYILLCGYPPF-----GGQTDQE 229
Query: 462 NIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQRPS 496
++ E+ F F P + L K +P++R S
Sbjct: 230 ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 180
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 181 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 234
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 235 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
Query: 505 RYIKR 509
+ R
Sbjct: 295 ELLAR 299
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 181
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 235
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 505 RYIKR 509
+ R
Sbjct: 296 ELLAR 300
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 158
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 159 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 212
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
Query: 505 RYIKR 509
+ R
Sbjct: 273 ELLAR 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 153
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 207
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 505 RYIKR 509
+ R
Sbjct: 268 ELLAR 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 153
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 207
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 505 RYIKR 509
+ R
Sbjct: 268 ELLAR 272
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 186
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+ TE
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV------TENN 240
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
+ KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 241 V-MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 289
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 347
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 348 QRPTFKQLVEDLDRI 362
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI+ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIITLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 196 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 155
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 156 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 209
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 210 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269
Query: 505 RYIKR 509
+ R
Sbjct: 270 ELLAR 274
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++V
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATV 158
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 159 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 212
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
Query: 505 RYIKR 509
+ R
Sbjct: 273 ELLAR 277
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E ++++E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEXTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
+I+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 196 --MRIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGL+ V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E ++++E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+ T + K ++ E M L S+++
Sbjct: 91 RDFLG-------EASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLR--- 138
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ IA GM+YL H +L NIL+ L K+S
Sbjct: 139 --KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 189
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGL V P++ + G P W +PE + + K++ SDV+S+G++
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI---------AYRKFTSASDVWSYGIVL 240
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW D N RP F
Sbjct: 241 WEVMSYGERPYWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 499 SICRIL-RYIKRFIMMNPHYNSQPDPPMPLVDYSDIESRLLRKFPSW 544
I IL + I+ + ++ P L+D S+++ R W
Sbjct: 299 QIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDW 345
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 103
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 104 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 154
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 155 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 204
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 205 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 261
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 262 -DYFTSTEPQYQ 272
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+ S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVAYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+ TE
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV------TENN 194
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
+ KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 195 V-MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 101
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 102 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 152
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 153 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 202
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 203 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 259
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 260 -DYFTSTEPQYQ 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPV 332
E S + HPN++H T K +++E M L ++++ + F++
Sbjct: 94 EASIMGQFDHPNVVHLEGVVT--RGKPVMIVIEFMENGALDAFLR-----KHDGQFTVIQ 146
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
V ++ IA GM YL H +L NIL+ L K+S FGLS V P
Sbjct: 147 LVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSN-------LVCKVSDFGLSRVIEDDP 199
Query: 393 KSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFE 450
++ + +G P W APE ++ K++ SDV+S+G++ +E+++ G+ P+
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYR---------KFTSASDVWSYGIVMWEVMSYGERPYW 250
Query: 451 DAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
D + + + I G R P P + L CW + +RP F I IL + R
Sbjct: 251 D--MSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 166
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 167 XYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 218 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGCLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 172
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 173 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 224 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIXKDPDXVRK 207
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 208 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 257
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVCEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ LV E+ + + H NI++ L T + ++I+ S+ +L Y++
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVGYASKGNLREYLRARRPPGM 140
Query: 318 EICCPRKRIP---FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E R+P + V Q+ARGMEYL S+K H +L N+L+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 375 LHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
KI+ FGL+ + N + +G P W APE L + Y+ +SDV+
Sbjct: 196 --MKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEAL---------FDRVYTHQSDVW 243
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301
Query: 493 QRPSFSSICRILRYI 507
QRP+F + L I
Sbjct: 302 QRPTFKQLVEDLDRI 316
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 110 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 162
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 163 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 214 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIXKDPDXVRK 198
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 199 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 248
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H NL NIL+ E KI FGL+ V
Sbjct: 122 S--------QICKGMEYLGTKRYIHRNLATRNILV-------ENENRVKIGDFGLTKVLP 166
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ + K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 167 QDKEYYKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 213
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 214 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 273
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 274 VNQRPSFRDLA 284
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIXKDPDXVRK 198
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 199 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 248
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 182
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 183 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 234 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 182
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 183 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 234 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIXKDPDXVRK 207
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 208 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 257
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 108 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 160
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 161 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 212 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 263
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 46/281 (16%)
Query: 229 RILIKSEDYQVRRRLGSGSQYKEILWLGESFALRHFFG-------------DIEPLVPEI 275
+I +K ED+ + + LG GS K ++L E FF D+E + E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGK--VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 276 SSL-LSLSHPNIMHFLCGFTDEEKKECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVA 333
L L+ HP + H C F + K+ F +ME L DL +I+ C + F L A
Sbjct: 69 RVLSLAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQ--SCHK----FDLSRA 120
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+I G+++LHSK I + +L NILL G H KI+ FG+ G
Sbjct: 121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-------HIKIADFGMCKENMLGDA 173
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ T +I APE+L KY+ D +SFG++ +E+L G+ PF
Sbjct: 174 KTNXFCGTPDYI--APEIL---------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ- 221
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
+++ +IR + P +P K +L + + +P +R
Sbjct: 222 -DEEELFHSIRM-DNPFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 61 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 318 EICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E C P + DL+ Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 172
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 173 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 222
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 223 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 280
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 281 RPTFKQLVEDLDRI 294
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + + H ++ ++E +++ E MS+ L ++K R
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 164 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 214 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE- 270
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 271 -DYFTSTEPQYQ 281
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 166
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 167 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 218 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNV-------VKICDFGLARDIXKDPDXVRK 207
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 208 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 257
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ R ++ G R P ++ + CWH +P+QRP+FS + L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDXVRK 207
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 208 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 257
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRK 324
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++ P
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 325 RIPF----------SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
F S V Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 187
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 188 V-MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 237
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 295
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 35/251 (13%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEIC 320
R F G E S + HPNI+H T + K ++ E M L +++K
Sbjct: 68 RDFLG-------EASIMGQFDHPNIIHLEGVVT--KSKPVMIVTEYMENGSLDTFLK--- 115
Query: 321 CPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
+ F++ V ++ I+ GM+YL H +L NIL+ L K+S
Sbjct: 116 --KNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSN-------LVCKVS 166
Query: 381 GFGLSSVKNFGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGLS V P++ + G P W APE + + K++ SDV+S+G++
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI---------AFRKFTSASDVWSYGIVM 217
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+E+++ G+ P+ + + + + + G R P P + L CW + N RP F
Sbjct: 218 WEVVSYGERPYWE--MTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFD 275
Query: 499 SICRILRYIKR 509
I +L + R
Sbjct: 276 EIVNMLDKLIR 286
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 128 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 180
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 181 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 232 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 283
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 257
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 258 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 307
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 351
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 265 FGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRK 324
G++ + E + SHPN++ L E ++ + DL ++I
Sbjct: 71 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-------- 122
Query: 325 RIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
R P DL+ LQ+A+GM+YL SKK H +L N +L + K++
Sbjct: 123 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVAD 175
Query: 382 FGLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDV 432
FGL+ SV N ++G P W A ES K++ KSDV
Sbjct: 176 FGLARDMYDKEXXSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDV 219
Query: 433 YSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADP 491
+SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 220 WSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 277
Query: 492 NQRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 278 EMRPSFSELVSRISAIFSTFI 298
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 116
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 117 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 169
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 170 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 213
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 214 SFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 271
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 272 MRPSFSELVSRISAIFSTFI 291
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATE 173
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 174 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 227
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 228 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287
Query: 505 RYIKR 509
+ R
Sbjct: 288 ELLAR 292
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 49/266 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 124
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 177
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 178 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 221
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 222 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 279
Query: 493 QRPSFSS-ICRILRYIKRFIMMNPHY 517
RPSFS + RI FI HY
Sbjct: 280 MRPSFSELVSRISAIFSTFI--GEHY 303
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 121
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 122 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 174
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 175 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 218
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 219 SFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 276
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 277 MRPSFSELVSRISAIFSTFI 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATE 181
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 235
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 505 RYIKR 509
+ R
Sbjct: 296 ELLAR 300
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 123
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 124 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 176
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 177 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 220
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 221 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 278
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 279 MRPSFSELVSRISAIFSTFI 298
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F + +D+ Q A+GM+YLH+K I H +L +NI L L KI FGL++
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-------LTVKIGDFGLATE 153
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K+ S + +W APEV+ ++ + YS +SDVY+FG++ +E++TG++
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDK------NPYSFQSDVYAFGIVLYELMTGQL 207
Query: 448 PFEDAHLQGD---KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
P+ + + + + R + + + PK + L C ++RP F I +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 505 RYIKR 509
+ R
Sbjct: 268 ELLAR 272
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 124
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 177
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 178 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 221
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 222 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 279
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 280 MRPSFSELVSRISAIFSTFI 299
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 250
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 251 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 300
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 344
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 252
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 253 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 302
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
E + EIS L SL HPNI+ F E+KK +L+ E ++I R F
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVF--EDKKYFYLVTEFYEGG--ELFEQII---NRHKF 143
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
A ++M QI G+ YLH I H ++ P NILL+ + + L+ KI FGLSS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS----LLNIKIVDFGLSSFF 199
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ K + GT + + APEVL++ KY+EK DV+S G+I + +L G P
Sbjct: 200 SKDYKLRDRLGTAY---YIAPEVLKK----------KYNEKCDVWSCGVIMYILLCGYPP 246
Query: 449 FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTN----LTKRCWHADPNQRPSFSSICRIL 504
F + Q + + + G + F F+ K +++ L K D N+R +
Sbjct: 247 FGGQNDQ--DIIKKVEKG-KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS- 302
Query: 505 RYIKRF 510
R+IK++
Sbjct: 303 RWIKKY 308
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H +L NILL T G + KI FGL+ +
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILL------THGRI-TKICDFGLARDIKNDSNYVVKG 221
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S N Y+ +SDV+S+G+ +E+ + G P+ +
Sbjct: 222 NARLPVKWMAPE---------SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S 271
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K + I+ G R L P H+P + ++ K CW ADP +RP+F I +++
Sbjct: 272 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 259
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 260 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 309
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 353
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIK------- 317
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 318 EICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
E C P + DL+ Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 187
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 188 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 237
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 295
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 265 FGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRK 324
G++ + E + SHPN++ L E ++ + DL ++I
Sbjct: 90 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-------- 141
Query: 325 RIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
R P DL+ LQ+A+GM+YL SKK H +L N +L + K++
Sbjct: 142 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVAD 194
Query: 382 FGLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDV 432
FGL+ SV N ++G P W A ES K++ KSDV
Sbjct: 195 FGLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDV 238
Query: 433 YSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADP 491
+SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 239 WSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 296
Query: 492 NQRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 297 EMRPSFSELVSRISAIFSTFI 317
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 207
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 208 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 257
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLR-- 105
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 106 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 156
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 157 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 206
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 207 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE- 263
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 264 -DYFTSTEPQYQ 274
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 122
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 123 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 175
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 176 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 219
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 220 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 277
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 278 MRPSFSELVSRISAIFSTFI 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 119
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM+YL SKK H +L N +L + K++ F
Sbjct: 120 NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVADF 172
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 173 GLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 216
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 217 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 274
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 275 MRPSFSELVSRISAIFSTFI 294
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H +L NILL T G + KI FGL+ +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILL------THGRI-TKICDFGLARDIKNDSNYVVKG 223
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S N Y+ +SDV+S+G+ +E+ + G P+ +
Sbjct: 224 NARLPVKWMAPE---------SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S 273
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K + I+ G R L P H+P + ++ K CW ADP +RP+F I +++
Sbjct: 274 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 30/243 (12%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKEC-----FLIMELMSR-DLCSYIKEIC 320
DIE + E + + HP++ L G + + + +I+ M DL +++ +
Sbjct: 68 DIEEFLREAACMKEFDHPHVAK-LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--LA 124
Query: 321 CPRKRIPFSLPVA--VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAK 378
PF+LP+ V M+ IA GMEYL S+ H +L N +L +
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED-------MTVC 177
Query: 379 ISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMI 438
++ FGLS G + P W A E L +N Y+ SDV++FG+
Sbjct: 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN---------LYTVHSDVWAFGVT 228
Query: 439 CFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
+EI+T G+ P+ A ++ ++ + G R P + V +L +CW ADP QRPSF
Sbjct: 229 MWEIMTRGQTPY--AGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSF 286
Query: 498 SSI 500
+ +
Sbjct: 287 TCL 289
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 265 FGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRK 324
G++ + E + SHPN++ L E ++ + DL ++I
Sbjct: 91 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-------- 142
Query: 325 RIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
R P DL+ LQ+A+GM+YL SKK H +L N +L + K++
Sbjct: 143 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-------FTVKVAD 195
Query: 382 FGLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDV 432
FGL+ SV N ++G P W A ES K++ KSDV
Sbjct: 196 FGLARDMYDKEYYSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDV 239
Query: 433 YSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADP 491
+SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 240 WSFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 297
Query: 492 NQRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 298 EMRPSFSELVSRISAIFSTFI 318
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 244
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 245 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 294
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 209
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 210 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 259
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 198
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 199 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 248
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNV-------VKIXDFGLARDIYKDPDYVRK 203
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 204 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 253
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ R ++ G R P ++ + CWH +P+QRP+FS + L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 47/287 (16%)
Query: 236 DYQVRRRLGSGS--QYKEILWLGESFALR-----HFFGD-IEPLVPEISSLLSLSHPNIM 287
D ++ ++G+GS W G A++ F + + + E++ + L HPNI+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 288 HFLCGFTDEEKKECFLIMELMSRDLC------SYIKEICCPRKRIPFSLPVAVDLMLQIA 341
F+ T + ++ E +SR S +E R+R+ + +A
Sbjct: 98 LFMGAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL--------SMAYDVA 147
Query: 342 RGMEYLHSKK--IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK-NFGPKSPSQS 398
+GM YLH++ I H +L N+L+ + K+ FGLS +K + S +
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKK-------YTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDK 458
GT W APEVL + +EKSDVYSFG+I +E+ T + P+ + +
Sbjct: 201 GTPE---WMAPEVLRDEPS---------NEKSDVYSFGVILWELATLQQPWGNLNPAQVV 248
Query: 459 MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ + +R P + V + + CW +P +RPSF++I +LR
Sbjct: 249 AAVGFKC-KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 198
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 199 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 248
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ R ++ G R P ++ + CWH +P+QRP+FS +
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 121 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 165
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ F K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 166 QDKEFFKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 212
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 272
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 273 VNQRPSFRDLA 283
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H +L NILL T G + KI FGL+ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILL------THGRI-TKICDFGLARDIKNDSNYVVKG 228
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S N Y+ +SDV+S+G+ +E+ + G P+ +
Sbjct: 229 NARLPVKWMAPE---------SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S 278
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K + I+ G R L P H+P + ++ K CW ADP +RP+F I +++
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
Q+A+GME+L S+K H +L NILL + KI FGL+ P +
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNV-------VKICDFGLARDIYKDPDYVRK 203
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
P W APE + + Y+ +SDV+SFG++ +EI + G P+ +
Sbjct: 204 GDARLPLKWMAPETI---------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 253
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ R ++ G R P ++ + CWH +P+QRP+FS + L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H +L NILL T G + KI FGL+ +
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILL------THGRI-TKICDFGLARDIKNDSNYVVKG 205
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S N Y+ +SDV+S+G+ +E+ + G P+ +
Sbjct: 206 NARLPVKWMAPE---------SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S 255
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K + I+ G R L P H+P + ++ K CW ADP +RP+F I +++
Sbjct: 256 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
+E + E + L+HPN++ + E L+ + DL +I R P
Sbjct: 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--------RSP 117
Query: 328 FSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL 384
P DL+ LQ+ARGMEYL +K H +L N +L + K++ FGL
Sbjct: 118 QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML-------DESFTVKVADFGL 170
Query: 385 S-SVKNFGPKSPSQSGTTH-PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
+ + + S Q P W A ES +++ KSDV+SFG++ +E+
Sbjct: 171 ARDILDREYYSVQQHRHARLPVKWTA---------LESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 443 LT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC 501
LT G P+ H+ ++ + G R P + P + + ++CW ADP RP+F +
Sbjct: 222 LTRGAPPYR--HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279
Query: 502 RILRYIKRFIMMNPHYNSQP 521
+ I ++ HY P
Sbjct: 280 GEVEQIVS-ALLGDHYVQLP 298
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLR-- 279
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL +
Sbjct: 280 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLGRL 330
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 331 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 380
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
VP+ + ++ + G R P P+ + +L +CW DP +RP+F + L
Sbjct: 381 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H +L NILL T G + KI FGL+ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILL------THGRI-TKICDFGLARHIKNDSNYVVKG 228
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S N Y+ +SDV+S+G+ +E+ + G P+ +
Sbjct: 229 NARLPVKWMAPE---------SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S 278
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K + I+ G R L P H+P + ++ K CW ADP +RP+F I +++
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 30/251 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLR-- 278
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 329
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 330 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 380 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE- 436
Query: 507 IKRFIMMNPHY 517
F P Y
Sbjct: 437 -DYFTSTEPQY 446
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 103 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARLIE 155
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVP 448
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+VP
Sbjct: 156 DNEXTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
Query: 449 FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIK 508
+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 206 Y--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE--D 261
Query: 509 RFIMMNPHYN 518
F P Y
Sbjct: 262 YFTSTEPQYQ 271
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
I L EI L +L H NI+ + T++ LIME + S L Y+ P+ +
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKN 121
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
+L + +QI +GM+YL S++ H +L N+L+ E KI FGL+
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV-------ESEHQVKIGDFGLTK 174
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT- 444
+++ + P W+APE L + SK+ SDV+SFG+ E+LT
Sbjct: 175 AIETDKEXXTVKDDRDSPVFWYAPECLMQ---------SKFYIASDVWSFGVTLHELLTY 225
Query: 445 ------------GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
+ + ++ ++ G+R P + P V L ++CW P+
Sbjct: 226 CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 285
Query: 493 QRPSFSSI 500
R SF ++
Sbjct: 286 NRTSFQNL 293
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E M++ L ++K R
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLR-- 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 110 --LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 161 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 211 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE- 267
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 268 -DYFTSTEPQYQ 278
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
I L EI L +L H NI+ + T++ LIME + S L Y+ P+ +
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKN 109
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
+L + +QI +GM+YL S++ H +L N+L+ E KI FGL+
Sbjct: 110 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV-------ESEHQVKIGDFGLTK 162
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT- 444
+++ + P W+APE L + SK+ SDV+SFG+ E+LT
Sbjct: 163 AIETDKEXXTVKDDRDSPVFWYAPECLMQ---------SKFYIASDVWSFGVTLHELLTY 213
Query: 445 ------------GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
+ + ++ ++ G+R P + P V L ++CW P+
Sbjct: 214 CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 273
Query: 493 QRPSFSSI 500
R SF ++
Sbjct: 274 NRTSFQNL 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 115/267 (43%), Gaps = 49/267 (18%)
Query: 265 FGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRK 324
G++ + E + SHPN++ L E ++ + DL ++I
Sbjct: 131 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-------- 182
Query: 325 RIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
R P DL+ LQ+A+GM++L SKK H +L N +L + K++
Sbjct: 183 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVAD 235
Query: 382 FGLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDV 432
FGL+ SV N ++G P W A ES K++ KSDV
Sbjct: 236 FGLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDV 279
Query: 433 YSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADP 491
+SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 280 WSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA 337
Query: 492 NQRPSFSS-ICRILRYIKRFIMMNPHY 517
RPSFS + RI FI HY
Sbjct: 338 EMRPSFSELVSRISAIFSTFI--GEHY 362
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 472 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 524
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 525 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 576 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEISSLLS 280
I S+ Y+ +R LG GS + IL G+ A++ D E L+ E+ L
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNIM F E+K +L+ E+ + EI RKR FS A ++ Q+
Sbjct: 83 LDHPNIMKLYEFF--EDKGYFYLVGEVYTG--GELFDEII-SRKR--FSEVDAARIIRQV 135
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ Y+H KI H +L P N+LL+ + + +I FGLS+ K + GT
Sbjct: 136 LSGITYMHKNKIVHRDLKPENLLLESKSKDA----NIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APEVL + Y EK DV+S G+I + +L+G PF A+
Sbjct: 192 AY---YIAPEVL----------HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 49/266 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 125
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 126 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 178
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 179 GLARDMLDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 222
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 223 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 280
Query: 493 QRPSFSS-ICRILRYIKRFIMMNPHY 517
RPSFS + RI FI HY
Sbjct: 281 MRPSFSELVSRISAIFSTFI--GEHY 304
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
++L+ Q++ GM+YL H +L N+LL T+ Y AKIS FGLS +++
Sbjct: 473 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHY--AKISDFGLSKALRADEN 525
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+Q+ P W+APE + + K+S KSDV+SFG++ +E + G+ P+
Sbjct: 526 YYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
++G +++ + GER P P+ + +L CW D RP F+++ LR
Sbjct: 577 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 628
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLR-- 278
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 329
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 330 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
VP+ + ++ + G R P P+ + +L +CW +P +RP+F
Sbjct: 380 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 124
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 177
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 178 GLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 221
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 222 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 279
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 280 MRPSFSELVSRISAIFSTFI 299
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E M++ L ++K R
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLR-- 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 110 --LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 161 IEDNEWTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 211 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE- 267
Query: 507 IKRFIMMNPHYN 518
F P Y
Sbjct: 268 -DYFTSTEPQYQ 278
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 122
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 123 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 175
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 176 GLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 219
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 220 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 277
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 278 MRPSFSELVSRISAIFSTFI 297
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 49/266 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 125
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 126 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 178
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 179 GLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 222
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 223 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 280
Query: 493 QRPSFSS-ICRILRYIKRFIMMNPHY 517
RPSFS + RI FI HY
Sbjct: 281 MRPSFSELVSRISAIFSTFI--GEHY 304
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 49/266 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 124
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 125 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 177
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 178 GLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 221
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 222 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 279
Query: 493 QRPSFSS-ICRILRYIKRFIMMNPHY 517
RPSFS + RI FI HY
Sbjct: 280 MRPSFSELVSRISAIFSTFI--GEHY 303
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G++ + E + SHPN++ L E ++ + DL ++I R
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--------R 129
Query: 326 IPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
P DL+ LQ+A+GM++L SKK H +L N +L + K++ F
Sbjct: 130 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-------FTVKVADF 182
Query: 383 GLS---------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
GL+ SV N ++G P W A ES K++ KSDV+
Sbjct: 183 GLARDMYDKEFDSVHN-------KTGAKLPVKWMA---------LESLQTQKFTTKSDVW 226
Query: 434 SFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPN 492
SFG++ +E++T G P+ D + ++ + G R L P + P + + +CWH
Sbjct: 227 SFGVLLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 284
Query: 493 QRPSFSS-ICRILRYIKRFI 511
RPSFS + RI FI
Sbjct: 285 MRPSFSELVSRISAIFSTFI 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
V Q+ARGMEYL SKK H +L N+L+ TE + KI+ FGL+ +
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDNV-MKIADFGLARDIHHIDY 198
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDA 452
+ P W APE L + Y+ +SDV+SFG++ +EI T G P+
Sbjct: 199 YKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
++ ++ + ++ G R P + + + + CWHA P+QRP+F + L I
Sbjct: 250 PVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRK 324
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++ P
Sbjct: 68 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 125
Query: 325 RIPF----------SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
+ S V Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 179
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 180 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 229
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 230 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 287
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 288 RPTFKQLVEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRK 324
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++ P
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 325 RIPF----------SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
+ S V Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 187
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 188 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 237
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 238 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 295
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
V Q+ARGMEYL SKK H +L N+L+ TE + KI+ FGL+ +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDNV-MKIADFGLARDIHHIDY 205
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDA 452
+ P W APE L + Y+ +SDV+SFG++ +EI T G P+
Sbjct: 206 YKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
++ ++ + ++ G R P + + + + CWHA P+QRP+F + L I
Sbjct: 257 PVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRK 324
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++ P
Sbjct: 65 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 122
Query: 325 RIPF----------SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
+ S V Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 176
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 177 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 226
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 227 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 284
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 285 RPTFKQLVEDLDRI 298
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
+ E S + HPNI+ L G + + + + L ++++ F++
Sbjct: 97 FLSEASIMGQFDHPNIIR-LEGVVTRGRLAMIVTEYMENGSLDTFLRT-----HDGQFTI 150
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
V ++ + GM YL H +L N+L+ + L K+S FGLS V
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV-------DSNLVCKVSDFGLSRVLED 203
Query: 391 GPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVP 448
P + + +G P W APE + + +S SDV+SFG++ +E+L G+ P
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAI---------AFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 449 FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIK 508
+ + + + ++ G R P P + L CWH D QRP FS I +L +
Sbjct: 255 YWN--MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 509 R 509
R
Sbjct: 313 R 313
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 120 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 164
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 165 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 211
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 212 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 271
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 272 VNQRPSFRDLA 282
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
+ E S + HPNI+ L G + + + + L ++++ F++
Sbjct: 97 FLSEASIMGQFDHPNIIR-LEGVVTRGRLAMIVTEYMENGSLDTFLRT-----HDGQFTI 150
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
V ++ + GM YL H +L N+L+ + L K+S FGLS V
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV-------DSNLVCKVSDFGLSRVLED 203
Query: 391 GPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVP 448
P + + +G P W APE + + +S SDV+SFG++ +E+L G+ P
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAI---------AFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 449 FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIK 508
+ + + + ++ G R P P + L CWH D QRP FS I +L +
Sbjct: 255 YWN--MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 509 R 509
R
Sbjct: 313 R 313
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 125 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 169
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 170 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 216
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 217 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 276
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 277 VNQRPSFRDLA 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 152 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 196
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 197 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 243
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 244 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 303
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 304 VNQRPSFRDLA 314
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 119 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 163
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 164 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 210
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 211 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 270
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 271 VNQRPSFRDLA 281
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEISSLLS 280
I S+ Y+ +R LG GS + IL G+ A++ D E L+ E+ L
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNIM F E+K +L+ E+ + EI RKR FS A ++ Q+
Sbjct: 106 LDHPNIMKLYEFF--EDKGYFYLVGEVYTG--GELFDEIIS-RKR--FSEVDAARIIRQV 158
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ Y+H KI H +L P N+LL+ + + +I FGLS+ K + GT
Sbjct: 159 LSGITYMHKNKIVHRDLKPENLLLESKSKDA----NIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APEVL + Y EK DV+S G+I + +L+G PF A+
Sbjct: 215 AY---YIAPEVL----------HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 121 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 165
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 166 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 212
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 272
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 273 VNQRPSFRDLA 283
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 127 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 171
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 172 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 218
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 219 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 278
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 279 VNQRPSFRDLA 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 124 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 168
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 169 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 215
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 216 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 275
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 276 VNQRPSFRDLA 286
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEISSLLS 280
I S+ Y+ +R LG GS + IL G+ A++ D E L+ E+ L
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNIM F E+K +L+ E+ + EI RKR FS A ++ Q+
Sbjct: 107 LDHPNIMKLYEFF--EDKGYFYLVGEVYTG--GELFDEIIS-RKR--FSEVDAARIIRQV 159
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ Y+H KI H +L P N+LL+ + + +I FGLS+ K + GT
Sbjct: 160 LSGITYMHKNKIVHRDLKPENLLLESKSKDA----NIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APEVL + Y EK DV+S G+I + +L+G PF A+
Sbjct: 216 AY---YIAPEVL----------HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 28/238 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVGEYMSKGSLLDFLKGETGKYLR-- 278
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 329
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 330 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 380 VPY--PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEISSLLS 280
I S+ Y+ +R LG GS + IL G+ A++ D E L+ E+ L
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNIM F E+K +L+ E+ + EI RKR FS A ++ Q+
Sbjct: 89 LDHPNIMKLYEFF--EDKGYFYLVGEVYTGG--ELFDEII-SRKR--FSEVDAARIIRQV 141
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ Y+H KI H +L P N+LL+ + + +I FGLS+ K + GT
Sbjct: 142 LSGITYMHKNKIVHRDLKPENLLLESKSKDA----NIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APEVL + Y EK DV+S G+I + +L+G PF A+
Sbjct: 198 AY---YIAPEVL----------HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 45/296 (15%)
Query: 232 IKSEDYQVRRRLGSGSQY----------KEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
I +DY+++ +GSG+ KE + + + L ++ L+ EI ++
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAI-KRINLEKCQTSMDELLKEIQAMSQC 70
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCP--RKRIPFSLPVAVDLML 338
HPNI+ + F K E +L+M+L+S + IK I K ++
Sbjct: 71 HHPNIVSYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
++ G+EYLH H ++ NILL G+ +I+ FG+S+ G +++
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGS-------VQIADFGVSAFLATGG-DITRN 180
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED--- 451
F+ W APEV+E+ Y K+D++SFG+ E+ TG P+
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVR--------GYDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 452 -----AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
LQ D S ++ + + + + C DP +RP+ + + R
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF-RKMISLCLQKDPEKRPTAAELLR 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 126 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 170
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 171 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 217
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 218 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 277
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 278 VNQRPSFRDLA 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 121 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 165
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 166 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 212
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 272
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 273 VNQRPSFRDLA 283
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 139 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 183
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 184 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 230
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 231 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 290
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 291 VNQRPSFRDLA 301
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 128 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 172
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 173 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 219
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 220 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 279
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 280 VNQRPSFRDLA 290
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
D E ++ E + L +P I+ L G E L+ME+ K + R+
Sbjct: 52 ADTEEMMREAQIMHQLDNPYIVR-LIGVCQAEA--LMLVMEMAGGGPLH--KFLVGKREE 106
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
IP S +L+ Q++ GM+YL K H +L N+LL R +AKIS FGLS
Sbjct: 107 IPVS--NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-------YAKISDFGLS 157
Query: 386 SVKNFGPKS---PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
K G ++S P W+APE + + K+S +SDV+S+G+ +E
Sbjct: 158 --KALGADDSYYTARSAGKWPLKWYAPECI---------NFRKFSSRSDVWSYGVTMWEA 206
Query: 443 LT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC 501
L+ G+ P++ ++G ++ I G+R P P + L CW RP F ++
Sbjct: 207 LSYGQKPYK--KMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 264
Query: 502 RILR 505
+ +R
Sbjct: 265 QRMR 268
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 45/296 (15%)
Query: 232 IKSEDYQVRRRLGSGSQY----------KEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
I +DY+++ +GSG+ KE + + + L ++ L+ EI ++
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAI-KRINLEKCQTSMDELLKEIQAMSQC 65
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCP--RKRIPFSLPVAVDLML 338
HPNI+ + F K E +L+M+L+S + IK I K ++
Sbjct: 66 HHPNIVSYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
++ G+EYLH H ++ NILL G+ +I+ FG+S+ G +++
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGS-------VQIADFGVSAFLATG-GDITRN 175
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED--- 451
F+ W APEV+E+ Y K+D++SFG+ E+ TG P+
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVR--------GYDFKADIWSFGITAIELATGAAPYHKYPP 227
Query: 452 -----AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
LQ D S ++ + + + + C DP +RP+ + + R
Sbjct: 228 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF-RKMISLCLQKDPEKRPTAAELLR 282
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD KE K + ++
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 139 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 183
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 184 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 230
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 231 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 290
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 291 VNQRPSFRDLA 301
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFS 329
+ E S + HPNI+H T + K +I E M L ++++ + F+
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLR-----KNDGRFT 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
+ V ++ I GM+YL H +L NIL+ L K+S FG+S V
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN-------LVCKVSDFGMSRVLE 182
Query: 390 FGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKV 447
P++ + G P W APE + + K++ SDV+S+G++ +E+++ G+
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAI---------AYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P+ D Q + + I G R P P + L CW + + RP F I +L +
Sbjct: 234 PYWDMSNQ--DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
Query: 508 KR 509
R
Sbjct: 292 IR 293
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 267 DIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRK 324
D+ L+ E+ + + H NI++ L T + ++I+E S+ +L Y++ P
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL 174
Query: 325 RIPF----------SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY 374
+ S V Q+ARGMEYL SKK H +L N+L+ TE
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV------TEDN 228
Query: 375 LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
+ KI+ FGL+ + + P W APE L + Y+ +SDV+S
Sbjct: 229 V-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---------FDRIYTHQSDVWS 278
Query: 435 FGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQ 493
FG++ +EI T G P+ ++ ++ + ++ G R P + + + + CWHA P+Q
Sbjct: 279 FGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 336
Query: 494 RPSFSSICRILRYI 507
RP+F + L I
Sbjct: 337 RPTFKQLVEDLDRI 350
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFS 329
+ E S + HPNI+H T + K +I E M L ++++ + F+
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLR-----KNDGRFT 114
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
+ V ++ I GM+YL H +L NIL+ L K+S FG+S V
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN-------LVCKVSDFGMSRVLE 167
Query: 390 FGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKV 447
P++ + G P W APE + + K++ SDV+S+G++ +E+++ G+
Sbjct: 168 DDPEAAYTTRGGKIPIRWTAPEAI---------AYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P+ D + + + I G R P P + L CW + + RP F I +L +
Sbjct: 219 PYWD--MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
Query: 508 KR 509
R
Sbjct: 277 IR 278
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFS 329
+ E S + HPNI+H T + K +I E M L ++++ + F+
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLR-----KNDGRFT 108
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
+ V ++ I GM+YL H +L NIL+ L K+S FG+S V
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN-------LVCKVSDFGMSRVLE 161
Query: 390 FGPKSP-SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKV 447
P++ + G P W APE + + K++ SDV+S+G++ +E+++ G+
Sbjct: 162 DDPEAAYTTRGGKIPIRWTAPEAI---------AYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P+ D + + + I G R P P + L CW + + RP F I +L +
Sbjct: 213 PYWD--MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
Query: 508 KR 509
R
Sbjct: 271 IR 272
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 28/238 (11%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + L H ++ ++E +++ E MS+ L ++K R
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLR-- 361
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
LP VD+ QIA GM Y+ H +L +NIL+ L K++ FGL+ +
Sbjct: 362 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------LVCKVADFGLARL 412
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ Q G P W AP E+A +++ KSDV+SFG++ E+ T G+
Sbjct: 413 IEDNEYTARQ-GAKFPIKWTAP---------EAALYGRFTIKSDVWSFGILLTELTTKGR 462
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
VP+ + ++ + G R P P+ + +L +CW +P +RP+F + L
Sbjct: 463 VPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W APE L+
Sbjct: 155 DLAARNCMVAHD-------FTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRWMAPESLK 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 206 D---------GVFTTSSDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 254
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +PN RP+F I +L+
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 101/244 (41%), Gaps = 30/244 (12%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFS 329
+ E S + HPN++H T + +I E M L S++++ F+
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQ-----NDGQFT 133
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
+ V ++ IA GM+YL H +L NIL+ L K+S FGLS
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN-------LVCKVSDFGLSRFLE 186
Query: 388 -KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
P S G P W APE ++ K++ SDV+S+G++ +E+++ G
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYR---------KFTSASDVWSYGIVMWEVMSYG 237
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ D + + I R P P + L CW D N RP F I L
Sbjct: 238 ERPYWD--MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
Query: 506 YIKR 509
+ R
Sbjct: 296 KMIR 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 96 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 155
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
NL N ++ KI FG++ ++ + G P W APE L+
Sbjct: 156 NLAARNCMVAHD-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMAPESLK 206
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ T S SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 207 DGVFTTS---------SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 255
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +PN RP+F I +L+
Sbjct: 256 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
NL N ++ KI FG++ ++ + G P W APE L+
Sbjct: 155 NLAARNCMVAHD-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMAPESLK 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ T S SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 206 DGVFTTS---------SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 254
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +PN RP+F I +L+
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
D E ++ E + L +P I+ L G E L+ME+ K + R+
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVR-LIGVCQAEA--LMLVMEMAGGG--PLHKFLVGKREE 432
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
IP S +L+ Q++ GM+YL K H NL N+LL R +AKIS FGLS
Sbjct: 433 IPVS--NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH-------YAKISDFGLS 483
Query: 386 SVKNFGPKS---PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
K G ++S P W+APE + + K+S +SDV+S+G+ +E
Sbjct: 484 --KALGADDSYYTARSAGKWPLKWYAPECI---------NFRKFSSRSDVWSYGVTMWEA 532
Query: 443 LT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC 501
L+ G+ P++ ++G ++ I G+R P P + L CW RP F ++
Sbjct: 533 LSYGQKPYKK--MKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 590
Query: 502 RILR 505
+ +R
Sbjct: 591 QRMR 594
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI L SL H NI+ + ++ LIME + L Y+++ ++RI
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK---HKERIDHI--K 118
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV----- 387
+ QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 119 LLQYTSQICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLPQDK 171
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 172 EXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFTYIE 218
Query: 448 PFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHADPNQ 493
+ + +M N + G+ +F P P + + CW+ + NQ
Sbjct: 219 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 278
Query: 494 RPSFSSIC 501
RPSF +
Sbjct: 279 RPSFRDLA 286
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP-----K 393
QI +GMEYL S++ H +L NIL+ E H KI+ FGL+ + +
Sbjct: 119 QICKGMEYLGSRRCVHRDLAARNILV-------ESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT---GKVPFE 450
P QS P W+APE L +N +S +SDV+SFG++ +E+ T
Sbjct: 172 EPGQS----PIFWYAPESLSDN---------IFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
Query: 451 DAHLQGDKMSRNIRA----------GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ R++ A G+R P P V L K CW P RPSFS++
Sbjct: 219 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 105/251 (41%), Gaps = 51/251 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS----RDLCSYIKEICCPRKRIPFS 329
EI L SL H NI+ + ++ LIME + RD E K + ++
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
QI +GMEYL +K+ H +L NIL+ E KI FGL+ V
Sbjct: 124 S--------QICKGMEYLGTKRYIHRDLATRNILV-------ENENRVKIGDFGLTKVLP 168
Query: 388 ---KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ K P +S P W+APE L E SK+S SDV+SFG++ +E+ T
Sbjct: 169 QDKEXXKVKEPGES----PIFWYAPESLTE---------SKFSVASDVWSFGVVLYELFT 215
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLF--------------PFHSPKYVTNLTKRCWHAD 490
+ + +M N + G+ +F P P + + CW+ +
Sbjct: 216 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 275
Query: 491 PNQRPSFSSIC 501
NQRPSF +
Sbjct: 276 VNQRPSFRDLA 286
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 30/244 (12%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFS 329
+ E S + HPN++H T + +I E M L S++++ F+
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQ-----NDGQFT 107
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
+ V ++ IA GM+YL H L NIL+ L K+S FGLS
Sbjct: 108 VIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSN-------LVCKVSDFGLSRFLE 160
Query: 388 -KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
P S G P W APE ++ K++ SDV+S+G++ +E+++ G
Sbjct: 161 DDTSDPTYTSALGGKIPIRWTAPEAIQYR---------KFTSASDVWSYGIVMWEVMSYG 211
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ D + + I R P P + L CW D N RP F I L
Sbjct: 212 ERPYWD--MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
Query: 506 YIKR 509
+ R
Sbjct: 270 KMIR 273
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 38/180 (21%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-----KNFGPK 393
QI +GMEYL S++ H +L NIL+ E H KI+ FGL+ + + +
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILV-------ESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT---GKVPFE 450
P QS P W+APE L +N +S +SDV+SFG++ +E+ T
Sbjct: 188 EPGQS----PIFWYAPESLSDN---------IFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
Query: 451 DAHLQGDKMSRNIRA----------GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ R++ A G+R P P V L K CW P RPSFS++
Sbjct: 235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P L + Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLAR 208
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
+ P W APE S + Y+ +SDV+S+G++ +EI + G
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLG 259
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
P+ L K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 260 LNPYPGI-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 38/180 (21%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-----KNFGPK 393
QI +GMEYL S++ H +L NIL+ E H KI+ FGL+ + + +
Sbjct: 123 QICKGMEYLGSRRCVHRDLAARNILV-------ESEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT---GKVPFE 450
P QS P W+APE L +N +S +SDV+SFG++ +E+ T
Sbjct: 176 EPGQS----PIFWYAPESLSDN---------IFSRQSDVWSFGVVLYELFTYCDKSCSPS 222
Query: 451 DAHLQGDKMSRNIRA----------GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ R++ A G+R P P V L K CW P RPSFS++
Sbjct: 223 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 42/182 (23%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-----KNFGPK 393
QI +GMEYL S++ H +L NIL+ E H KI+ FGL+ + + +
Sbjct: 122 QICKGMEYLGSRRCVHRDLAARNILV-------ESEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-----GKVP 448
P QS P W+APE L +N +S +SDV+SFG++ +E+ T
Sbjct: 175 EPGQS----PIFWYAPESLSDN---------IFSRQSDVWSFGVVLYELFTYCDKSCSPS 221
Query: 449 FEDAHLQGDKMSRNIRA----------GERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
E + G + R++ A G+R P P V L K CW P RPSFS
Sbjct: 222 AEFLRMMGSE--RDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 279
Query: 499 SI 500
++
Sbjct: 280 AL 281
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P L + Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLAR 200
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
+ P W APE S + Y+ +SDV+S+G++ +EI + G
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLG 251
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
P+ L K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 252 LNPYPGI-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 48/274 (17%)
Query: 235 EDYQVRRRLGSGS-------------QYKEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
+D+Q+ R LG+GS +Y + L + +R +E E L +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIV 63
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
+HP I+ F D + + F+IM+ + +L S + RK F PVA ++
Sbjct: 64 THPFIIRMWGTFQDAQ--QIFMIMDYIEGGELFSLL------RKSQRFPNPVAKFYAAEV 115
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+EYLHSK I + +L P NILL G H KI+ FG + + P
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNG-------HIKITDFGFAK---YVPDVTYXLCG 165
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
T +I APEV+ S Y++ D +SFG++ +E+L G PF D++ K
Sbjct: 166 TPDYI--APEVV---------STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTY 212
Query: 461 RNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
I E PF + V +L R D +QR
Sbjct: 213 EKILNAELRFPPFFNED-VKDLLSRLITRDLSQR 245
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+ +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLARDIMNDSNYIVKG 224
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S + Y+ +SDV+S+G++ +EI + G P+ L
Sbjct: 225 NARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNS 274
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 45/273 (16%)
Query: 256 GESFALRHFFGDIEP-----LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS- 309
GE A++ D P EI L +L H +I+ + D+ +K L+ME +
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L Y+ PR I L + QI GM YLHS+ H NL N+LL
Sbjct: 103 GSLRDYL-----PRHSI--GLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRL 155
Query: 370 STEGYLHAKISGFGLSSVKNFGPK--SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYS 427
KI FGL+ G + + G + P W+APE L+E K+
Sbjct: 156 -------VKIGDFGLAKAVPEGHEYYRVREDGDS-PVFWYAPECLKE---------YKFY 198
Query: 428 EKSDVYSFGMICFEILTG-------------KVPFEDAHLQGDKMSRNIRAGERPLFPFH 474
SDV+SFG+ +E+LT + + +++ + GER P
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK 258
Query: 475 SPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P V +L K CW + + RP+F ++ IL+ +
Sbjct: 259 CPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+ +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLARDIMNDSNYIVKG 224
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S + Y+ +SDV+S+G++ +EI + G P+ L
Sbjct: 225 NARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNS 274
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+ +
Sbjct: 166 QVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLARDIMNDSNYIVKG 218
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S + Y+ +SDV+S+G++ +EI + G P+ L
Sbjct: 219 NARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNS 268
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEISSLLS 280
I S+ Y+ +R LG GS + IL G+ A++ D E L+ E+ L
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNI F E+K +L+ E+ + EI RKR FS A ++ Q+
Sbjct: 83 LDHPNIXKLYEFF--EDKGYFYLVGEVYTG--GELFDEIIS-RKR--FSEVDAARIIRQV 135
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
G+ Y H KI H +L P N+LL+ + + +I FGLS+ K + GT
Sbjct: 136 LSGITYXHKNKIVHRDLKPENLLLESKSKDA----NIRIIDFGLSTHFEASKKXKDKIGT 191
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APEVL + Y EK DV+S G+I + +L+G PF A+
Sbjct: 192 AY---YIAPEVL----------HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GM +L SK H ++ N+LL T G++ AKI FGL+ +
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLL------TNGHV-AKIGDFGLARDIMNDSNYIVKG 226
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE S + Y+ +SDV+S+G++ +EI + G P+ L
Sbjct: 227 NARLPVKWMAPE---------SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNS 276
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
K + ++ G + P +PK + ++ + CW +P RP+F IC L+
Sbjct: 277 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 45/273 (16%)
Query: 256 GESFALRHFFGDIEP-----LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS- 309
GE A++ D P EI L +L H +I+ + D+ +K L+ME +
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L Y+ PR I L + QI GM YLH++ H NL N+LL
Sbjct: 103 GSLRDYL-----PRHSI--GLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRL 155
Query: 370 STEGYLHAKISGFGLSSVKNFGPK--SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYS 427
KI FGL+ G + + G + P W+APE L+E K+
Sbjct: 156 -------VKIGDFGLAKAVPEGHEYYRVREDGDS-PVFWYAPECLKE---------YKFY 198
Query: 428 EKSDVYSFGMICFEILTG-------------KVPFEDAHLQGDKMSRNIRAGERPLFPFH 474
SDV+SFG+ +E+LT + + +++ + GER P
Sbjct: 199 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK 258
Query: 475 SPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P V +L K CW + + RP+F ++ IL+ +
Sbjct: 259 CPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 92 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 151
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W APE L+
Sbjct: 152 DLAARNCMVAHD-------FTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRWMAPESLK 202
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 203 ---------DGVFTTSSDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 251
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +P RP+F I +L+
Sbjct: 252 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 88 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 147
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 148 DLAARNCMVAED-------FTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRWMSPESLK 198
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 199 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 247
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 248 DNCPDMLLELMRMCWQYNPKMRPSFLEI 275
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W APE L+
Sbjct: 155 DLAARNCMVAHD-------FTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRWMAPESLK 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 206 ---------DGVFTTSSDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 254
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +P RP+F I +L+
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 240 RRRLGSGSQYKEILWLGESFALRHFFGDI---------EPLVPEISSLLSLSHPNIMHFL 290
+R+LGSG+ L S L I E + EI L SL HPNI+
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 291 CGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR-IPFSLPVAVDLMLQIARGMEYLHS 349
F E+ +++ME + + ++ I + R S +LM Q+ + Y HS
Sbjct: 87 EVF--EDYHNMYIVME--TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 350 KKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAP 409
+ + H +L P NIL + T + KI FGL+ + S + +GT ++ AP
Sbjct: 143 QHVVHKDLKPENILFQ----DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA---LYMAP 195
Query: 410 EVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF-----EDAHLQGDKMSRNIR 464
EV + + + K D++S G++ + +LTG +PF E+ + N
Sbjct: 196 EVFKRD----------VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA 245
Query: 465 AGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
RPL P +L K+ DP +RPS + +
Sbjct: 246 VECRPLTP-----QAVDLLKQMLTKDPERRPSAAQV 276
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 236 DYQVRRRLGSGSQYKEI-----LWLGESFALR--HFFGDIEP-----LVPEISSLLSLSH 283
++++ +++G G Q+ E+ L G AL+ F ++ + EI L L+H
Sbjct: 33 NFRIEKKIGRG-QFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
PN++ + F E E +++EL + DL IK ++ IP +Q+
Sbjct: 92 PNVIKYYASFI--EDNELNIVLELADAGDLSRMIKHFKKQKRLIPER--TVWKYFVQLCS 147
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
+E++HS+++ H ++ P+N+ + G K+ GL + F K+ +
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGV-------VKLGDLGLG--RFFSSKTTAAHSLVG 198
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRN 462
+ +PE + EN Y+ KSD++S G + +E+ + PF + + +
Sbjct: 199 TPYYMSPERIHEN---------GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 249
Query: 463 IRAGERPLFPF-HSPKYVTNLTKRCWHADPNQRPSFSSI 500
I + P P H + + L C + DP +RP + +
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E R KE+ +K F + ++A
Sbjct: 73 PNILRLYGYFHDATR--VYLILEYAPRG--EVYKEL---QKLSKFDEQRTATYITELANA 125
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 172
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 173 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 218
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 40/248 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIPFSLPV 332
EI L +L H +I+ + D+ +K L+ME + L Y+ C L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-------VGLAQ 112
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
+ QI GM YLH++ H L N+LL KI FGL+ G
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-------VKIGDFGLAKAVPEGH 165
Query: 393 K--SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT----GK 446
+ + G + P W+APE L+E K+ SDV+SFG+ +E+LT +
Sbjct: 166 EYYRVREDGDS-PVFWYAPECLKE---------CKFYYASDVWSFGVTLYELLTYCDSNQ 215
Query: 447 VPFED-----AHLQGD----KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
P H QG +++ + GER P P + +L K CW + + RP+F
Sbjct: 216 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 275
Query: 498 SSICRILR 505
++ IL+
Sbjct: 276 QNLVPILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 40/248 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIPFSLPV 332
EI L +L H +I+ + D+ +K L+ME + L Y+ C L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-------VGLAQ 113
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
+ QI GM YLH++ H L N+LL KI FGL+ G
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-------VKIGDFGLAKAVPEGH 166
Query: 393 K--SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT----GK 446
+ + G + P W+APE L+E K+ SDV+SFG+ +E+LT +
Sbjct: 167 EYYRVREDGDS-PVFWYAPECLKE---------CKFYYASDVWSFGVTLYELLTYCDSNQ 216
Query: 447 VPFED-----AHLQGD----KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
P H QG +++ + GER P P + +L K CW + + RP+F
Sbjct: 217 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 276
Query: 498 SSICRILR 505
++ IL+
Sbjct: 277 QNLVPILQ 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 157 DLAARNCMVAED-------FTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRWMSPESLK 207
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 208 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 256
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 257 DNCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKFS 107
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 161 MEDSTXXKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 211 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 85 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 137
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 184
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 185 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 230
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 231 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 271
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 70 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 122
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIANFGWSV------HAPSSRRTTLC 169
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 215
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 176 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 224
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + ++CW D + RP F +
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + + G P W APE L+
Sbjct: 155 DLAARNCMVAHD-------FTVKIGDFGMT--RDIYETAYYRKGGKGLLPVRWMAPESLK 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ T S SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 206 DGVFTTS---------SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 254
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +P RP+F I +L+
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIANFGWSV------HAPSSRRTTLC 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 171 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 216
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 217 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 171 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 216
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 217 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 73 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 125
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 172
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE +E + EK D++S G++C+E L GK PFE +
Sbjct: 173 GTLDYLPPEXIE---------GRXHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 218
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 73 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 125
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 172
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 173 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 218
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 134 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 185
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 186 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 234
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + ++CW D + RP F +
Sbjct: 235 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 171 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 216
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 217 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 69 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 121
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSC------HAPSSRRTTLS 168
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 169 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 214
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 215 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 94 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 146
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 193
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 194 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 239
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 240 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 48/282 (17%)
Query: 236 DYQVRRRLGSGSQYKEILWL----GESFALR----------HFFGDIEPLVPEISSLLSL 281
+YQ+ + LG GS K L G+ AL+ G IE EIS L L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLL 61
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+I+ + K E +++E +L YI + R S A QI
Sbjct: 62 RHPHIIKLYD--VIKSKDEIIMVIEYAGNELFDYIVQ------RDKMSEQEARRFFQQII 113
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EY H KI H +L P N+LL + +L+ KI+ FGLS++ G + G+
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLL-------DEHLNVKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ + APEV+ S Y+ + DV+S G+I + +L ++PF+D + +
Sbjct: 167 N---YAAPEVI---------SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLF 212
Query: 461 RNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+NI G L F SP L KR +P R S I +
Sbjct: 213 KNISNGVYTLPKFLSPG-AAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKFS 107
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-------VKLGDFGLSRY 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 211 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 48/282 (17%)
Query: 236 DYQVRRRLGSGSQYKEILWL----GESFALR----------HFFGDIEPLVPEISSLLSL 281
+YQ+ + LG GS K L G+ AL+ G IE EIS L L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLL 65
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+I+ + K E +++E +L YI + R S A QI
Sbjct: 66 RHPHIIKLYD--VIKSKDEIIMVIEYAGNELFDYIVQ------RDKMSEQEARRFFQQII 117
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EY H KI H +L P N+LL + +L+ KI+ FGLS++ G + G+
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLL-------DEHLNVKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ + APEV+ S Y+ + DV+S G+I + +L ++PF+D + +
Sbjct: 171 N---YAAPEVI---------SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLF 216
Query: 461 RNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+NI G L F SP L KR +P R S I +
Sbjct: 217 KNISNGVYTLPKFLSPG-AAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 167
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 168 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 213
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 214 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 33/236 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ RK
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQ----VRK--- 485
Query: 328 FSLPVAVDLML--QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
FSL +A ++ Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLS 538
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT- 444
+ G P W APE S + +++ SDV+ FG+ +EIL
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMH 588
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 589 GVKPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 65 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 117
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 164
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 165 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 210
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 211 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 251
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 178
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 179 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 227
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + ++CW D + RP F +
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 67 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 119
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 166
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 167 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 212
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 213 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 253
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 33/236 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ RK
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQ----VRK--- 485
Query: 328 FSLPVAVDLML--QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
FSL +A ++ Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-------VKLGDFGLS 538
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT- 444
+ G P W APE S + +++ SDV+ FG+ +EIL
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMH 588
Query: 445 GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 589 GVKPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
E + EI+ SL +P+++ F F D++ ++++E+ C + ++R
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI-----CRRRSLLELHKRRKAV 123
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ P A M Q +G++YLH+ ++ H +L N+ L + KI FGL++
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-------MDVKIGDFGLATKI 176
Query: 389 NF-GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
F G + GT + + APEVL +S + D++S G I + +L GK
Sbjct: 177 EFDGERKKDLCGTPN---YIAPEVL---------CKKGHSFEVDIWSLGCILYTLLVGKP 224
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PFE + L+ + I+ E + P H + L +R HADP RPS + +
Sbjct: 225 PFETSCLKETYI--RIKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAEL 274
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKE-----ICC------- 321
E + + +PNI+ L G K C L + DL +++ +C
Sbjct: 100 EAALMAEFDNPNIVKLL-GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 322 PRKRI------PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYL 375
R R+ P S + + Q+A GM YL +K H +L N L+ +
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN-------M 211
Query: 376 HAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSF 435
KI+ FGLS + P W PE + N +Y+ +SDV+++
Sbjct: 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN---------RYTTESDVWAY 262
Query: 436 GMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
G++ +EI + G P+ + +++ +R G P + P + NL + CW P R
Sbjct: 263 GVVLWEIFSYGLQPYYG--MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 320
Query: 495 PSFSSICRILR 505
PSF SI RIL+
Sbjct: 321 PSFCSIHRILQ 331
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 72 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 124
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWSV------HAPSSRRTTLC 171
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 172 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQE 217
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 218 TYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 258
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W APE L+
Sbjct: 155 DLAARNCMVAHD-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMAPESLK 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ T S SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 206 DGVFTTS---------SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 254
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +P RP+F I +L+
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 48/282 (17%)
Query: 236 DYQVRRRLGSGSQYKEILWL----GESFALR----------HFFGDIEPLVPEISSLLSL 281
+YQ+ + LG GS K L G+ AL+ G IE EIS L L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLL 71
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+I+ + K E +++E +L YI + R S A QI
Sbjct: 72 RHPHIIKLYD--VIKSKDEIIMVIEYAGNELFDYIVQ------RDKMSEQEARRFFQQII 123
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EY H KI H +L P N+LL + +L+ KI+ FGLS++ G + G+
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLL-------DEHLNVKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ + APEV+ S Y+ + DV+S G+I + +L ++PF+D + +
Sbjct: 177 N---YAAPEVI---------SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLF 222
Query: 461 RNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+NI G L F SP L KR +P R S I +
Sbjct: 223 KNISNGVYTLPKFLSPG-AAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 30/233 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
E + EI+ SL +P+++ F F D++ ++++E+ C + ++R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI-----CRRRSLLELHKRRKAV 139
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ P A M Q +G++YLH+ ++ H +L N+ L + KI FGL++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-------MDVKIGDFGLATKI 192
Query: 389 NF-GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
F G + + GT + + APEVL +S + D++S G I + +L GK
Sbjct: 193 EFDGERKKTLCGTPN---YIAPEVL---------CKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PFE + L+ + I+ E + P H + L +R HADP RPS + +
Sbjct: 241 PFETSCLKETYI--RIKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAEL 290
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 104
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 157
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 158 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 207
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 208 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 48/282 (17%)
Query: 236 DYQVRRRLGSGSQYKEILWL----GESFALR----------HFFGDIEPLVPEISSLLSL 281
+YQ+ + LG GS K L G+ AL+ G IE EIS L L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLL 70
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+I+ + K E +++E +L YI + R S A QI
Sbjct: 71 RHPHIIKLYD--VIKSKDEIIMVIEYAGNELFDYIVQ------RDKMSEQEARRFFQQII 122
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EY H KI H +L P N+LL + +L+ KI+ FGLS++ G + G+
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLL-------DEHLNVKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ + APEV+ S Y+ + DV+S G+I + +L ++PF+D + +
Sbjct: 176 N---YAAPEVI---------SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLF 221
Query: 461 RNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+NI G L F SP L KR +P R S I +
Sbjct: 222 KNISNGVYTLPKFLSPG-AAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPV 332
E +++ LSHP ++ F G +E +++ E +S L +Y++ + P L
Sbjct: 53 EAQTMMKLSHPKLVKFY-GVCSKEYP-IYIVTEYISNGCLLNYLRS--HGKGLEPSQL-- 106
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
+++ + GM +L S + H +L N L+ L K+S FG++
Sbjct: 107 -LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD-------LCVKVSDFGMTRYV-LDD 157
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFED 451
+ S GT P W APEV KYS KSDV++FG++ +E+ + GK+P++
Sbjct: 158 QYVSSVGTKFPVKWSAPEVFH---------YFKYSSKSDVWAFGILMWEVFSLGKMPYD- 207
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ + G R P + + + CWH P +RP+F +
Sbjct: 208 -LYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 24/236 (10%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA-VDLMLQIA 341
HPN++ + C T + + ++ +EL + +L ++ + + + L+ QIA
Sbjct: 68 HPNVIRYYCSETTD--RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY------LHAKISGFGL-----SSVKNF 390
G+ +LHS KI H +L P NIL+ T L IS FGL S +F
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPF 449
+ SGT+ W APE+LEE+ + + + + D++S G + + IL+ GK PF
Sbjct: 186 RTNLNNPSGTSG---WRAPELLEESNNLQ--TKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 450 EDAHLQGDKMSRNIRAGERPLFPFHSPKYV---TNLTKRCWHADPNQRPSFSSICR 502
D + + + R I + + + H + T+L + DP +RP+ + R
Sbjct: 241 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 51/282 (18%)
Query: 235 EDYQVRRRLGSGSQYKEILWLGES-----FALRHFF-------GDIEPLVPEISSLLSLS 282
ED+++ R LG G ++ + E AL+ F G L E+ L
Sbjct: 8 EDFEIGRPLGKG-KFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
HPNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 67 HPNILRLYGYFHDSTR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELAN 119
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH 402
+ Y HSKK+ H ++ P N+LL G KI+ FG S V + + GT
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRAALCGT-- 169
Query: 403 PFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRN 462
+ PE++E + EK D++S G++C+E L GK PFE A+ D R
Sbjct: 170 -LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQDTYKRI 218
Query: 463 IRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
R F P +VT +L R +P+QRP +
Sbjct: 219 SRV------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
++MELM+ DL SY++ + + P P + M+Q IA GM YL++KK H
Sbjct: 94 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 153
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W APE L+
Sbjct: 154 DLAARNCMVAHD-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMAPESLK 204
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ T S SD++SFG++ +EI + + P++ L +++ + + G P
Sbjct: 205 DGVFTTS---------SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQP 253
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ VT+L + CW +P RP+F I +L+
Sbjct: 254 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 107
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 211 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 107
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 211 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 40/291 (13%)
Query: 235 EDYQVRRRLGSGSQYKEILWLGESFALRHFFGDI----------EPLVPEISSLLSLSHP 284
E Y +++G GS K IL ++ +I E E++ L ++ HP
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 285 NIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
NI+ + F EE +++M+ DL I +K + F +D +QI
Sbjct: 84 NIVQYRESF--EENGSLYIVMDYCEGGDLFKRIN----AQKGVLFQEDQILDWFVQICLA 137
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
++++H +KI H ++ NI L G ++ FG++ V N +++ P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGT-------VQLGDFGIARVLN-STVELARACIGTP 189
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ + +PE+ E N Y+ KSD+++ G + +E+ T K FE ++ + I
Sbjct: 190 Y-YLSPEICE---------NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN--LVLKI 237
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR---ILRYIKRFI 511
+G P H + +L + + +P RPS +SI I + I++F+
Sbjct: 238 ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFL 288
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 71 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 122
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 174
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 175 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 223
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 224 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 70 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 121
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 173
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 174 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 222
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 223 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 73 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 124
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 176
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 177 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 225
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 226 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 164 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 213
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 214 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E R KE+ +K F + ++A
Sbjct: 73 PNILRLYGYFHDATR--VYLILEYAPRG--EVYKEL---QKLSKFDEQRTATYITELANA 125
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRXXLXGT--- 174
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 175 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 220
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 221 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 110 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 163 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 212
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 213 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 71 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGXLLDYVRE-----HKDNIGSQYLLN 122
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 174
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 175 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 223
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 224 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 33/229 (14%)
Query: 231 LIKSEDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLS 280
L+ E++Q ++G G+ YK L GE AL+ D E + EIS L
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L+HPNI+ L E K +L+ E + +DL ++ IP LP+ + Q+
Sbjct: 63 LNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQL 116
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+G+ + HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHE 167
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 VVTLWYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 156 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 207 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 255
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 256 DNCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 69 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 121
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + + GT
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRDTLCGT--- 170
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 171 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 216
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 217 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 156 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 207 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 255
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 256 DNCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 163 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 214 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 262
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P + L + CW +P RPSF I ++
Sbjct: 263 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + P P ++ M+Q IA GM YL++ K H
Sbjct: 93 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 152
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 153 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 203
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 204 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 252
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 253 DNCPDMLFELMRMCWQYNPKMRPSFLEI 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
E + EI+ SL +P+++ F F D++ ++++E+ C + ++R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI-----CRRRSLLELHKRRKAV 139
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ P A M Q +G++YLH+ ++ H +L N+ L + KI FGL++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-------MDVKIGDFGLATKI 192
Query: 389 NF-GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
F G + GT + + APEVL +S + D++S G I + +L GK
Sbjct: 193 EFDGERKKDLCGTPN---YIAPEVL---------CKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PFE + L+ + I+ E + P H + L +R HADP RPS + +
Sbjct: 241 PFETSCLKETYI--RIKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAEL 290
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 72 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 123
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 175
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 176 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 224
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 225 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 94 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 153
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 154 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 204
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 205 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 253
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 254 DNCPDMLFELMRMCWQYNPKMRPSFLEI 281
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 150 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 201 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 249
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 250 DNCPDMLFELMRMCWQYNPKMRPSFLEI 277
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 158 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 209
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 210 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 258
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 259 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 303
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 165
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 166 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 215
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 216 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 74 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 125
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKE 177
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 178 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 226
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 227 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIP 327
E + E ++ HP+I+ + T+ ++IMEL + +L S+++ ++
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV-----RKYS 135
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
L + Q++ + YL SK+ H ++ N+L+ K+ FGLS
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-------VKLGDFGLSRY 188
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
+ G P W APE S + +++ SDV+ FG+ +EIL G
Sbjct: 189 MEDSTYYKASKGKL-PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEILMHGV 238
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF+ D + R I GER P + P + +L +CW DP++RP F+ +
Sbjct: 239 KPFQGVK-NNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + P P ++ M+Q IA GM YL++ K H
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 163 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 214 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 262
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P + L + CW +P RPSF I ++
Sbjct: 263 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 157 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 207
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 208 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 256
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 257 DNCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRAALCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
E + EI+ SL +P+++ F F D++ ++++E+ C + ++R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI-----CRRRSLLELHKRRKAV 139
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ P A M Q +G++YLH+ ++ H +L N+ L + KI FGL++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-------MDVKIGDFGLATKI 192
Query: 389 NF-GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
F G + GT + + APEVL +S + D++S G I + +L GK
Sbjct: 193 EFDGERKKXLCGTPN---YIAPEVL---------CKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PFE + L+ + I+ E + P H + L +R HADP RPS + +
Sbjct: 241 PFETSCLKETYI--RIKKNEYSV-PRHINPVASALIRRMLHADPTLRPSVAEL 290
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA-VDLMLQIA 341
HPN++ + C T + + ++ +EL + +L ++ + + + L+ QIA
Sbjct: 68 HPNVIRYYCSETTD--RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY------LHAKISGFGL-----SSVKNF 390
G+ +LHS KI H +L P NIL+ T L IS FGL S F
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPF 449
+ SGT+ W APE+LEE+ + + + + D++S G + + IL+ GK PF
Sbjct: 186 RXNLNNPSGTSG---WRAPELLEESNNLQ--TKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 450 EDAHLQGDKMSRNIRAGERPLFPFHSPKYV---TNLTKRCWHADPNQRPSFSSICR 502
D + + + R I + + + H + T+L + DP +RP+ + R
Sbjct: 241 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + + GT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRAALCGT--- 172
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 173 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 218
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 169
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 170 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 218
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 219 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 125 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 184
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N ++ KI FG++ ++ + G P W +PE L+
Sbjct: 185 DLAARNCMVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 235
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 236 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 284
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 285 DNCPDMLFELMRMCWQYNPKMRPSFLEI 312
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
D ++ E+ L L HPNIM E+ +++ EL + EI KR
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTG--GELFDEII---KRK 116
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A ++ Q+ G+ Y+H I H +L P NILL+ S E KI FGLS+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE----SKEKDCDIKIIDFGLST 172
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K + GT + + APEVL Y EK DV+S G+I + +L+G
Sbjct: 173 CFQQNTKMKDRIGTAY---YIAPEVL----------RGTYDEKCDVWSAGVILYILLSGT 219
Query: 447 VPF 449
PF
Sbjct: 220 PPF 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
+ARGM+YL K+ H NL NIL+ E Y+ AKI+ FGLS + K ++
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILV------GENYV-AKIADFGLSRGQEVYVK---KTM 197
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDK 458
P W A ES + S Y+ SDV+S+G++ +EI++ G P+ + +
Sbjct: 198 GRLPVRWMA---------IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY--CGMTCAE 246
Query: 459 MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ + G R P + V +L ++CW P +RPSF+ I
Sbjct: 247 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 288
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 69 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 121
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTDLCGT--- 170
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 171 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 216
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 217 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTDLCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 176 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 224
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 176 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 224
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTDLCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 178
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 179 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 227
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 176 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 224
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTELCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 178
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 179 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 227
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 182
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 183 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 231
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 182
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 183 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 231
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 94 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 146
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRDDLCGT--- 195
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 196 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 241
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 242 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKEC----FLIMELMSR-DLCSYI--KEI 319
+IE + E + + SHPN++ L G E + +I+ M DL +Y+ +
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLL-GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL 137
Query: 320 CCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKI 379
K IP L + M+ IA GMEYL ++ H +L N +L+ + +
Sbjct: 138 ETGPKHIP--LQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD-------MTVCV 188
Query: 380 SGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
+ FGLS G P W A ES ++ Y+ KSDV++FG+
Sbjct: 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIA---------IESLADRVYTSKSDVWAFGVTM 239
Query: 440 FEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
+EI T G P+ +Q +M + G R P + + CW DP RP+FS
Sbjct: 240 WEIATRGMTPY--PGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
Query: 499 SI 500
+
Sbjct: 298 VL 299
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 301 CFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQ----IARGMEYLHSKKIYHG 355
+IMELM+R DL SY++ + + P P ++ M+Q IA GM YL++ K H
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTH--PFIWHAPEVLE 413
+L N + KI FG++ ++ + G P W +PE L+
Sbjct: 150 DLAARNCXVAED-------FTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFP 472
+ ++ SDV+SFG++ +EI T + P++ L +++ R + G P
Sbjct: 201 ---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 249
Query: 473 FHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ P + L + CW +P RPSF I
Sbjct: 250 DNCPDMLLELMRMCWQYNPKMRPSFLEI 277
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 182
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 183 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 231
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 149 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 200
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 201 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 249
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 250 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 177
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 178 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 226
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 73 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 125
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTDLCGT--- 174
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 175 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 220
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 221 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 130 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 181
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 182 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 230
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 231 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 70 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 122
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRXXLCGT--- 171
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 172 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 217
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 218 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 72 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 123
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKE 175
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 176 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 224
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + ++CW D + RP F +
Sbjct: 225 IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
D ++ E+ L L HPNIM E+ +++ EL + EI KR
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGG--ELFDEII---KRK 116
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A ++ Q+ G+ Y+H I H +L P NILL+ S E KI FGLS+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE----SKEKDCDIKIIDFGLST 172
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K + GT + + APEVL Y EK DV+S G+I + +L+G
Sbjct: 173 CFQQNTKMKDRIGTAY---YIAPEVL----------RGTYDEKCDVWSAGVILYILLSGT 219
Query: 447 VPF 449
PF
Sbjct: 220 PPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
D ++ E+ L L HPNIM E+ +++ EL + EI KR
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGG--ELFDEII---KRK 116
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A ++ Q+ G+ Y+H I H +L P NILL+ S E KI FGLS+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE----SKEKDCDIKIIDFGLST 172
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K + GT + + APEVL Y EK DV+S G+I + +L+G
Sbjct: 173 CFQQNTKMKDRIGTAY---YIAPEVL----------RGTYDEKCDVWSAGVILYILLSGT 219
Query: 447 VPF 449
PF
Sbjct: 220 PPF 222
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRTXLCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA GM YL +++ H +L N+L+K P+ H KI+ FGL+ + K
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGLAKLLGAEEKEYH 172
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 173 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 221
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 222 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRXXLCGT--- 172
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 173 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 218
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 68 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRXXLCGT--- 169
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 170 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 215
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 216 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 137/321 (42%), Gaps = 58/321 (18%)
Query: 237 YQVRRRLGSGS--------QYKEILWLGESFALRHFF--GDIEPLVP-EISSLLSLSHPN 285
Y +R LG GS YK + F R D+ V EIS L L HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 286 IMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGME 345
I+ T + +++E +L YI E +KR+ + QI +E
Sbjct: 71 IIKLYDVIT--TPTDIVMVIEYAGGELFDYIVE----KKRM--TEDEGRRFFQQIICAIE 122
Query: 346 YLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
Y H KI H +L P N+LL + L+ KI+ FGLS++ G + G+ +
Sbjct: 123 YCHRHKIVHRDLKPENLLL-------DDNLNVKIADFGLSNIMTDGNFLKTSCGSPN--- 172
Query: 406 WHAPEVLEENEQTESASNSKY--SEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ APEV+ N K + DV+S G++ + +L G++PF+D + + + +
Sbjct: 173 YAAPEVI----------NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN--LFKKV 220
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMNPHYNSQ-PD 522
+ + F SP +L +R ADP QR + I R +P +N PD
Sbjct: 221 NSCVYVMPDFLSPG-AQSLIRRMIVADPMQRITIQEIRR-----------DPWFNVNLPD 268
Query: 523 --PPMPLVDYSDIESRLLRKF 541
PM V S +SR++ K
Sbjct: 269 YLRPMEEVQGSYADSRIVSKL 289
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+++ R LG G Q K IL L F + +E L E+ L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 71 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDEQRTATYITELANA 123
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + GT
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAG-------ELKIADFGWS-VHAPSSRRDDLCGT--- 172
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L GK PFE +
Sbjct: 173 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGKPPFE-----ANTYQETY 218
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
+ R F F P +VT +L R +P+QRP +
Sbjct: 219 KRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 111/273 (40%), Gaps = 45/273 (16%)
Query: 256 GESFALRHFFGDIEP-----LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS- 309
GE A++ D P EI L +L H +I+ + D L+ME +
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L Y+ PR I L + QI GM YLH++ H +L N+LL
Sbjct: 120 GSLRDYL-----PRHSI--GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL 172
Query: 370 STEGYLHAKISGFGLSSVKNFGPKS--PSQSGTTHPFIWHAPEVLEENEQTESASNSKYS 427
KI FGL+ G + + G + P W+APE L+E K+
Sbjct: 173 -------VKIGDFGLAKAVPEGHEXYRVREDGDS-PVFWYAPECLKE---------YKFY 215
Query: 428 EKSDVYSFGMICFEILTG-------------KVPFEDAHLQGDKMSRNIRAGERPLFPFH 474
SDV+SFG+ +E+LT + + +++ + GER P
Sbjct: 216 YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK 275
Query: 475 SPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
P V +L K CW + + RP+F ++ IL+ +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E +S DL ++ IP LP+ + Q+ +G+
Sbjct: 65 NIVKLLDVIHTENK--LYLVFEFLSMDLKDFMD--ASALTGIP--LPLIKSYLFQLLQGL 118
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 169
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 170 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + +L HP+I+ L G +EE ++IMEL +L Y++ R +
Sbjct: 54 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 105
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ V LQI + M YL S H ++ NIL+ AS E K+ FGLS
Sbjct: 106 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPEC---VKLGDFGLSRY 158
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S T P W +PE S + +++ SDV+ F + +EIL+ GK
Sbjct: 159 IE-DEDYYKASVTRLPIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILSFGK 208
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF L+ + + G+R P P + L RCW DP+ RP F+ +
Sbjct: 209 QPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 260
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 70 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 123
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 174
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 175 WYRAPEIL--------LGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
+QIA+GM YL ++ H +L N+L+K H KI+ FGL+ + +
Sbjct: 126 MQIAKGMSYLEDVRLVHRDLAARNVLVKSPN-------HVKITDFGLARLLDIDETEYHA 178
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
G P W A ES +++ +SDV+S+G+ +E++T G P++ +
Sbjct: 179 DGGKVPIKWMA---------LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD--GIPA 227
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF----SSICRILRYIKRFIM 512
++ + GER P V + +CW D RP F S R+ R +RF++
Sbjct: 228 REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVV 287
Query: 513 MNPHYNSQPDPPMPL 527
+ N P PL
Sbjct: 288 IQ---NEDLGPASPL 299
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA-VDLMLQIA 341
HPN++ + C T + + ++ +EL + +L ++ + + + L+ QIA
Sbjct: 86 HPNVIRYYCSETTD--RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY------LHAKISGFGL-----SSVKNF 390
G+ +LHS KI H +L P NIL+ T L IS FGL S F
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPF 449
+ SGT+ W APE+LEE ++ + + D++S G + + IL+ GK PF
Sbjct: 204 RXNLNNPSGTSG---WRAPELLEE------STKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 450 EDAHLQGDKMSRNIRAGERPLFPFHSPKYV---TNLTKRCWHADPNQRPSFSSICR 502
D + + + R I + + + H + T+L + DP +RP+ + R
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 64 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 117
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 168
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 169 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E +S DL ++ IP LP+ + Q+ +G+
Sbjct: 64 NIVKLLDVIHTENK--LYLVFEFLSMDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 117
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 168
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 169 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E +S DL ++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEFLSMDLKDFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHXVM 170
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 171 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 219
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA-VDLMLQIA 341
HPN++ + C T + + ++ +EL + +L ++ + + + L+ QIA
Sbjct: 86 HPNVIRYYCSETTD--RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGY------LHAKISGFGL-----SSVKNF 390
G+ +LHS KI H +L P NIL+ T L IS FGL S F
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPF 449
+ SGT+ W APE+LEE ++ + + D++S G + + IL+ GK PF
Sbjct: 204 RXNLNNPSGTSG---WRAPELLEE------STKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 450 EDAHLQGDKMSRNIRAGERPLFPFHSPKYV---TNLTKRCWHADPNQRPSFSSICR 502
D + + + R I + + + H + T+L + DP +RP+ + R
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
+ARGM+YL K+ H +L NIL+ E Y+ AKI+ FGLS + K ++
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILV------GENYV-AKIADFGLSRGQEVYVK---KTM 190
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDK 458
P W A ES + S Y+ SDV+S+G++ +EI++ G P+ + +
Sbjct: 191 GRLPVRWMA---------IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY--CGMTCAE 239
Query: 459 MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ + G R P + V +L ++CW P +RPSF+ I
Sbjct: 240 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 281
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKEYH 177
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 178 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 226
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + ++CW D + RP F +
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 280 SLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQ 339
S HPN++ + C T+++++ ++ +EL + L Y+++ K + L+ Q
Sbjct: 74 SDEHPNVIRYFC--TEKDRQFQYIAIELCAATLQEYVEQ-----KDFAHLGLEPITLLQQ 126
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPS-QS 398
G+ +LHS I H +L P NIL+ A G + A IS FGL G S S +S
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNA--HGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDK 458
G W APE+L E+ N Y+ D++S G + + +++ E +H G
Sbjct: 185 GVPGTEGWIAPEMLSED----CKENPTYT--VDIFSAGCVFYYVIS-----EGSHPFGKS 233
Query: 459 MSR--NIRAGERPLFPFHSPKY----VTNLTKRCWHADPNQRPSFSSICR 502
+ R NI G L H K+ L ++ DP +RPS + +
Sbjct: 234 LQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E +S DL ++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEFLSMDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + +L HP+I+ L G +EE ++IMEL +L Y++ R +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ V LQI + M YL S H ++ NIL+ AS E K+ FGLS
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPEC---VKLGDFGLSRY 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S T P W +PE S + +++ SDV+ F + +EIL+ GK
Sbjct: 163 IE-DEDYYKASVTRLPIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILSFGK 212
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF L+ + + G+R P P + L RCW DP+ RP F+ +
Sbjct: 213 QPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKR 325
G IE + EI+ L L HPN++ + D + +++ EL+++ P
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG----------PVME 127
Query: 326 IPFSLPVAVD----LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
+P P++ D + +G+EYLH +KI H ++ PSN+L+ G H KI+
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-------HIKIAD 180
Query: 382 FGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFE 441
FG+S+ F S T + APE L E + S + DV++ G+ +
Sbjct: 181 FGVSN--EFKGSDALLSNTVGTPAFMAPESLSETRKIFSG------KALDVWAMGVTLYC 232
Query: 442 ILTGKVPFEDAHL 454
+ G+ PF D +
Sbjct: 233 FVFGQCPFMDERI 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 26/235 (11%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
E+ + L HPN++ F+ G ++K+ F+ + L IK + + P+S V+
Sbjct: 57 EVKVMRCLEHPNVLKFI-GVLYKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVS 112
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG-------YLHAKISGFGLSS 386
IA GM YLHS I H +LN N L++ + K GL S
Sbjct: 113 --FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+K P + W APE++ + Y EK DV+SFG++ EI+ G+
Sbjct: 171 LKK--PDRKKRYTVVGNPYWMAPEMI---------NGRSYDEKVDVFSFGIVLCEII-GR 218
Query: 447 VPFEDAHL-QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
V + +L + N+R P + P +T RC DP +RPSF +
Sbjct: 219 VNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
+ARGM+YL K+ H +L NIL+ E Y+ AKI+ FGLS + K ++
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILV------GENYV-AKIADFGLSRGQEVYVK---KTM 200
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDK 458
P W A ES + S Y+ SDV+S+G++ +EI++ G P+ + +
Sbjct: 201 GRLPVRWMA---------IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY--CGMTCAE 249
Query: 459 MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ + G R P + V +L ++CW P +RPSF+ I
Sbjct: 250 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 291
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E + +L HP+I+ L G +EE ++IMEL +L Y++ R +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 121
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ V LQI + M YL S H ++ NIL+ AS E K+ FGLS
Sbjct: 122 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPEC---VKLGDFGLSRY 174
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GK 446
S T P W +PE S + +++ SDV+ F + +EIL+ GK
Sbjct: 175 IE-DEDYYKASVTRLPIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILSFGK 224
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
PF L+ + + G+R P P + L RCW DP+ RP F+ +
Sbjct: 225 QPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 276
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHYVM 170
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 171 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 219
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHXVM 180
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 181 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 229
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 230 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHYVM 174
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 175 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 223
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 224 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 119
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 172
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ + GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 173 RKKTLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 221 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHYVM 170
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 171 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 219
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL +++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEFLHQDLKTFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 74 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 125
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKE 177
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 178 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 226
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 227 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 70 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 123
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 174
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 175 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 119
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 172
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ + GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 173 RKKTLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 221 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHYVM 174
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 175 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 223
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 224 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL +++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEHVHQDLKTFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKDFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 45/287 (15%)
Query: 231 LIKSEDYQVRRRLGSG---SQYKEILWLGES------FALRHFFGDIEP-----LVPEIS 276
++K +++ + LGSG + YK LW+ E A++ P ++ E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFSLPVAVD 335
+ S+ +P++ L G + LIM+LM L Y++E + ++
Sbjct: 72 VMASVDNPHVCRLL-GICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQYLLN 123
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKS 394
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKE 175
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAH 453
G P W A ES + Y+ +SDV+S+G+ +E++T G P++
Sbjct: 176 YHAEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-- 224
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ ++S + GER P V + +CW D + RP F +
Sbjct: 225 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 58/246 (23%)
Query: 237 YQVRRRLGSGSQYKEILW------LGESFALRHFFG------DIEPLVPEISSLLSLS-H 283
Y++ ++LG G+ I+W GE A++ F D + EI L LS H
Sbjct: 11 YELVKKLGKGAY--GIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLML-QIAR 342
NI++ L + ++ +L+ + M DL + I R PV ++ Q+ +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI--------RANILEPVHKQYVVYQLIK 120
Query: 343 GMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS----------------- 385
++YLHS + H ++ PSNILL H K++ FGLS
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAE-------CHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 386 --SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+ +NF P + + APE+L ++KY++ D++S G I EIL
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEIL--------LGSTKYTKGIDMWSLGCILGEIL 225
Query: 444 TGKVPF 449
GK F
Sbjct: 226 CGKPIF 231
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 123
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 124 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 176
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ + GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 177 RKKTLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 225 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 269
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 64 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 117
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 168
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 169 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 64 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 117
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 168
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 169 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
+Q+A GM YL SK+ H +L N+LL R KI FGL ++
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDL-------VKIGDFGLMRALPQNDDHYVM 180
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
Q PF W APE L+ +S SD + FG+ +E+ T G+ P+ L
Sbjct: 181 QEHRKVPFAWCAPESLK---------TRTFSHASDTWMFGVTLWEMFTYGQEPW--IGLN 229
Query: 456 GDKMSRNI-RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 230 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEI-LWLGESFALRHF--FGDIEPLVPEISSLLSLSHPNIMH 288
E + V +LG GS YK I G+ A++ D++ ++ EIS + P+++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 289 FLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
+ + + + +++ME + +I R + +A ++ +G+EYLH
Sbjct: 89 YYGSYF--KNTDLWIVMEYCG---AGSVSDIIRLRNKTLTEDEIAT-ILQSTLKGLEYLH 142
Query: 349 SKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKSPSQSGTTHPFIWH 407
+ H ++ NILL +TEG HAK++ FG++ + + K GT PF W
Sbjct: 143 FMRKIHRDIKAGNILL-----NTEG--HAKLADFGVAGQLTDXMAKRNXVIGT--PF-WM 192
Query: 408 APEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGE 467
APEV++E Y+ +D++S G+ E+ GK P+ D H M
Sbjct: 193 APEVIQE---------IGYNCVADIWSLGITAIEMAEGKPPYADIH----PMRAIFMIPT 239
Query: 468 RPLFPFHSPKY----VTNLTKRCWHADPNQRPSFSSICR 502
P F P+ T+ K+C P QR + + + +
Sbjct: 240 NPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL D E + EIS L L+HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 63 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 116
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 167
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 168 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL D E + EIS L L+HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 62 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 115
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG + +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYTHEVVTL 166
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 167 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 65 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 118
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 169
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 170 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 65 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 118
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 169
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 170 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 65 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 118
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 169
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 170 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 64 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 117
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 168
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 169 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 117
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 170
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 171 RKKVLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 219 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 263
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 67 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 120
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 171
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 172 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEFLHQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 40/233 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI +L HP+I+ + + F++ME +S +L YI C R+
Sbjct: 66 EIQNLKLFRHPHIIKLYQVIS--TPSDIFMVMEYVSGGELFDYI----CKNGRL--DEKE 117
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
+ L QI G++Y H + H +L P N+LL + +++AKI+ FGLS++ + G
Sbjct: 118 SRRLFQQILSGVDYCHRHMVVHRDLKPENVLL-------DAHMNAKIADFGLSNMMSDGE 170
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYS-EKSDVYSFGMICFEILTGKVPFED 451
G+ + + APEV+ S Y+ + D++S G+I + +L G +PF+D
Sbjct: 171 FLRXSCGSPN---YAAPEVI---------SGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKY----VTNLTKRCWHADPNQRPSFSSI 500
H+ + + I G F++P+Y V +L K DP +R + I
Sbjct: 219 DHVP--TLFKKICDG-----IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKEYH 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 176 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 224
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYI-KEICCPRKRIPFSLPVAVD 335
L+ ++HP I+ F E K +LI++ + DL + + KE+ + + F L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---- 133
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK-NFGPKS 394
++A +++LHS I + +L P NILL G H K++ FGLS + K+
Sbjct: 134 ---ELALALDHLHSLGIIYRDLKPENILLDEEG-------HIKLTDFGLSKESIDHEKKA 183
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
S GT + APEV+ T+SA D +SFG++ FE+LTG +PF+
Sbjct: 184 YSFCGTVE---YMAPEVVNRRGHTQSA---------DWWSFGVLMFEMLTGTLPFQ 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 58/282 (20%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFL-C--GF------------------- 293
G+++ +R + E E+ +L L H NI+H+ C GF
Sbjct: 37 GKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPE 96
Query: 294 ----TDEEKKECFLI-MELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
+ K +C I ME + +++ R+ +A++L QI +G++Y+H
Sbjct: 97 NSKNSSRSKTKCLFIQMEFCDK---GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH 153
Query: 349 SKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPSQSGTTHPFIWH 407
SKK+ H +L PSNI L T+ KI FGL +S+KN G ++ S+ GT +
Sbjct: 154 SKKLIHRDLKPSNIFL----VDTK---QVKIGDFGLVTSLKNDGKRTRSK-GTLR---YM 202
Query: 408 APEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGE 467
+PE + S+ Y ++ D+Y+ G+I E+L D + K ++R G
Sbjct: 203 SPEQI---------SSQDYGKEVDLYALGLILAELL----HVCDTAFETSKFFTDLRDG- 248
Query: 468 RPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
+ K L ++ P RP+ S I R L K+
Sbjct: 249 --IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 288
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYI-KEICCPRKRIPFSLPVAVD 335
L+ ++HP I+ F E K +LI++ + DL + + KE+ + + F L
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---- 134
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK-NFGPKS 394
++A +++LHS I + +L P NILL G H K++ FGLS + K+
Sbjct: 135 ---ELALALDHLHSLGIIYRDLKPENILLDEEG-------HIKLTDFGLSKESIDHEKKA 184
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
S GT + APEV+ T+SA D +SFG++ FE+LTG +PF+
Sbjct: 185 YSFCGTVE---YMAPEVVNRRGHTQSA---------DWWSFGVLMFEMLTGTLPFQ 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 45/269 (16%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHF-LC--GF----------TDEEKKECF 302
G+++ ++ + E E+ +L L H NI+H+ C GF + K +C
Sbjct: 36 GKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL 95
Query: 303 LI-MELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSN 361
I ME + +++ R+ +A++L QI +G++Y+HSKK+ + +L PSN
Sbjct: 96 FIQMEFCDK---GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 362 ILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTES 420
I L T+ KI FGL +S+KN G + S+ GT + +PE +
Sbjct: 153 IFL----VDTK---QVKIGDFGLVTSLKNDGKRXRSK-GTLR---YMSPEQI-------- 193
Query: 421 ASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVT 480
S+ Y ++ D+Y+ G+I E+L D + K ++R G + K
Sbjct: 194 -SSQDYGKEVDLYALGLILAELL----HVCDTAFETSKFFTDLRDG---IISDIFDKKEK 245
Query: 481 NLTKRCWHADPNQRPSFSSICRILRYIKR 509
L ++ P RP+ S I R L K+
Sbjct: 246 TLLQKLLSKKPEDRPNTSEILRTLTVWKK 274
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYI-KEICCPRKRIPFSLPVAVD 335
L+ ++HP I+ F E K +LI++ + DL + + KE+ + + F L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---- 133
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK-NFGPKS 394
++A +++LHS I + +L P NILL G H K++ FGLS + K+
Sbjct: 134 ---ELALALDHLHSLGIIYRDLKPENILLDEEG-------HIKLTDFGLSKESIDHEKKA 183
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
S GT + APEV+ T+SA D +SFG++ FE+LTG +PF+
Sbjct: 184 YSFCGTVE---YMAPEVVNRRGHTQSA---------DWWSFGVLMFEMLTGTLPFQ 227
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
+QIA+GM YL +++ H +L N+L+K H KI+ FGL+ + K +
Sbjct: 124 VQIAKGMMYLEERRLVHRDLAARNVLVKSPN-------HVKITDFGLARLLEGDEKEYNA 176
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
G P W A E + K++ +SDV+S+G+ +E++T G P++ +
Sbjct: 177 DGGKMPIKWMALECIH---------YRKFTHQSDVWSYGVTIWELMTFGGKPYDG--IPT 225
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC----RILRYIKRFIM 512
++ + GER P V + +CW D + RP F + R+ R +R+++
Sbjct: 226 REIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLV 285
Query: 513 M 513
+
Sbjct: 286 I 286
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+QIA+GM YL +++ H +L N+L+K P+ H KI+ FG + + K
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--------HVKITDFGRAKLLGAEEKEYH 182
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
G P W A ES + Y+ +SDV+S+G+ +E++T G P++ +
Sbjct: 183 AEGGKVPIKWMA---------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--IP 231
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++S + GER P V + +CW D + RP F +
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L L H N++ + +EEK++ +++ME + + + P KR P A
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVC--QA 111
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGP 392
Q+ G+EYLHS+ I H ++ P N+LL +T G L KIS G++ ++ F
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL-----TTGGTL--KISALGVAEALHPFAA 164
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
++ P + PE+ + ++ K D++S G+ + I TG PFE
Sbjct: 165 DDTCRTSQGSP-AFQPPEI-------ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ K+ NI G + P +++L K +P +R S I
Sbjct: 217 NIY--KLFENIGKGSYAI-PGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 141
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 142 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 194
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 195 RKKVLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 243 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 287
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 44/215 (20%)
Query: 240 RRRLGSGSQYKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHF--LCGF--TD 295
R R+ +G + + + E LRH L + HPN++ +C TD
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRH--------------LETFEHPNVVRLFDVCTVSRTD 89
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
E K L+ E + +DL +Y+ ++ P +P D+M Q+ RG+++LHS ++ H
Sbjct: 90 RETK-LTLVFEHVDQDLTTYLDKV--PEPGVPTE--TIKDMMFQLLRGLDFLHSHRVVHR 144
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH-APEVLEE 414
+L P NIL+ G K++ FGL+ + +F S T +W+ APEVL +
Sbjct: 145 DLKPQNILVTSSG-------QIKLADFGLARIYSFQMALTSVVVT----LWYRAPEVLLQ 193
Query: 415 NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
S Y+ D++S G I E+ K F
Sbjct: 194 ---------SSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS SL+H +++ F F D + F+++EL R + ++R + P A
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELCRRRSLLELH-----KRRKALTEPEA 143
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
+ QI G +YLH ++ H +L N+ L L KI FGL++ V+ G
Sbjct: 144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-------LEVKIGDFGLATKVEYDGE 196
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + + APEVL S +S + DV+S G I + +L GK PFE +
Sbjct: 197 RKKVLCGTPN---YIAPEVL---------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
L+ + I+ E + P H +L ++ DP RP+ + +
Sbjct: 245 CLKETYL--RIKKNEYSI-PKHINPVAASLIQKMLQTDPTARPTINEL 289
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
+QIA+GM YL +++ H +L N+L+K H KI+ FGL+ + K +
Sbjct: 147 VQIAKGMMYLEERRLVHRDLAARNVLVKSPN-------HVKITDFGLARLLEGDEKEYNA 199
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
G P W A E + K++ +SDV+S+G+ +E++T G P++ +
Sbjct: 200 DGGKMPIKWMALECIHYR---------KFTHQSDVWSYGVTIWELMTFGGKPYDG--IPT 248
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC----RILRYIKRFIM 512
++ + GER P V + +CW D + RP F + R+ R +R+++
Sbjct: 249 REIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLV 308
Query: 513 MN 514
+
Sbjct: 309 IQ 310
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 44/215 (20%)
Query: 240 RRRLGSGSQYKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHF--LCGF--TD 295
R R+ +G + + + E LRH L + HPN++ +C TD
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRH--------------LETFEHPNVVRLFDVCTVSRTD 89
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
E K L+ E + +DL +Y+ ++ P +P D+M Q+ RG+++LHS ++ H
Sbjct: 90 RETK-LTLVFEHVDQDLTTYLDKV--PEPGVPTE--TIKDMMFQLLRGLDFLHSHRVVHR 144
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH-APEVLEE 414
+L P NIL+ G K++ FGL+ + +F S T +W+ APEVL +
Sbjct: 145 DLKPQNILVTSSG-------QIKLADFGLARIYSFQMALTSVVVT----LWYRAPEVLLQ 193
Query: 415 NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
S Y+ D++S G I E+ K F
Sbjct: 194 ---------SSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 44/215 (20%)
Query: 240 RRRLGSGSQYKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIMHF--LCGF--TD 295
R R+ +G + + + E LRH L + HPN++ +C TD
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRH--------------LETFEHPNVVRLFDVCTVSRTD 89
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
E K L+ E + +DL +Y+ ++ P +P D+M Q+ RG+++LHS ++ H
Sbjct: 90 RETK-LTLVFEHVDQDLTTYLDKV--PEPGVPTE--TIKDMMFQLLRGLDFLHSHRVVHR 144
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH-APEVLEE 414
+L P NIL+ G K++ FGL+ + +F S T +W+ APEVL +
Sbjct: 145 DLKPQNILVTSSG-------QIKLADFGLARIYSFQMALTSVVVT----LWYRAPEVLLQ 193
Query: 415 NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
S Y+ D++S G I E+ K F
Sbjct: 194 ---------SSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 40/233 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI +L HP+I+ + + F++ME +S +L YI C R+
Sbjct: 61 EIQNLKLFRHPHIIKLYQVIS--TPTDFFMVMEYVSGGELFDYI----CKHGRV--EEME 112
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A L QI ++Y H + H +L P N+LL + +++AKI+ FGLS++ + G
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLL-------DAHMNAKIADFGLSNMMSDGE 165
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFED 451
+ G+ + + APEV+ S Y+ + D++S G+I + +L G +PF+D
Sbjct: 166 FLRTSCGSPN---YAAPEVI---------SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKY----VTNLTKRCWHADPNQRPSFSSI 500
H+ + + IR G F+ P+Y V L DP +R + I
Sbjct: 214 EHVP--TLFKKIRGG-----VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWL-GESFALRHFFGDIEP------LVPEISSLLSLSHP 284
E++Q ++G G+ YK L GE AL+ D E + EIS L L+HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ L E K +L+ E + +DL ++ IP LP+ + Q+ +G+
Sbjct: 66 NIVKLLDVIHTENK--LYLVFEHVDQDLKKFMD--ASALTGIP--LPLIKSYLFQLLQGL 119
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ HS ++ H +L P N+L+ GA K++ FGL+ + FG +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGA-------IKLADFGLA--RAFGVPVRTYXHEVVTL 170
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L YS D++S G I E++T + F
Sbjct: 171 WYRAPEIL--------LGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWLGESFALRHFFGDIE------PLVPEISSLLSLSHPN 285
E YQ ++G G+ YK G AL+ D E + EIS L L HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 286 IMHFLCGFTDEEKKECF-LIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
I+ + E C L+ E M +DL + E + + + Q+ RG+
Sbjct: 81 IVSLIDVIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-----YLYQLLRGV 132
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ H +I H +L P N+L+ GA K++ FGL+ + FG S +
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGA-------LKLADFGLA--RAFGIPVRSYTHEVVTL 183
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ AP+VL + KYS D++S G I E++TGK F
Sbjct: 184 WYRAPDVL--------MGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+ + R LG G Q K IL L F + +E L E+ L H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 72 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSRFDEQRTATYITELANA 124
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT-- 401
+ Y HSK++ H ++ P N+LL G KI+ FG S +PS TT
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNG-------ELKIADFGWSV------HAPSSRRTTLC 171
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E + EK D++S G++C+E L G PFE AH + R
Sbjct: 172 GTLDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGMPPFE-AHTYQETYRR 221
Query: 462 NIRAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
R F P +VT +L R + +QR + + +
Sbjct: 222 ISRV------EFTFPDFVTEGARDLISRLLKHNASQRLTLAEV 258
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 40/233 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI +L HP+I+ + + F++ME +S +L YI C R+
Sbjct: 61 EIQNLKLFRHPHIIKLYQVIS--TPTDFFMVMEYVSGGELFDYI----CKHGRV--EEME 112
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A L QI ++Y H + H +L P N+LL + +++AKI+ FGLS++ + G
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLL-------DAHMNAKIADFGLSNMMSDGE 165
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGKVPFED 451
G+ + + APEV+ S Y+ + D++S G+I + +L G +PF+D
Sbjct: 166 FLRDSCGSPN---YAAPEVI---------SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKY----VTNLTKRCWHADPNQRPSFSSI 500
H+ + + IR G F+ P+Y V L DP +R + I
Sbjct: 214 EHVP--TLFKKIRGG-----VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWLGESFALRHFFGDIE------PLVPEISSLLSLSHPN 285
E YQ ++G G+ YK G AL+ D E + EIS L L HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 286 IMHFLCGFTDEEKKECF-LIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
I+ + E C L+ E M +DL + E + + + Q+ RG+
Sbjct: 81 IVSLIDVIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-----YLYQLLRGV 132
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ H +I H +L P N+L+ GA K++ FGL+ + FG S +
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGA-------LKLADFGLA--RAFGIPVRSYTHEVVTL 183
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ AP+VL + KYS D++S G I E++TGK F
Sbjct: 184 WYRAPDVL--------MGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 31/176 (17%)
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYI-KEICCPRKRIPFSLPVAVD 335
L ++HP ++ F E K +LI++ + DL + + KE+ + + F L
Sbjct: 84 LADVNHPFVVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---- 137
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKS 394
++A G+++LHS I + +L P NILL G H K++ FGLS + K+
Sbjct: 138 ---ELALGLDHLHSLGIIYRDLKPENILLDEEG-------HIKLTDFGLSKEAIDHEKKA 187
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
S GT + APEV+ + SA D +S+G++ FE+LTG +PF+
Sbjct: 188 YSFCGTVE---YMAPEVVNRQGHSHSA---------DWWSYGVLMFEMLTGSLPFQ 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
QI++GM+YL K+ H +L NIL+ EG KIS FGLS +S
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILV------AEGR-KMKISDFGLSRDVYEEDSXVKRS 210
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W A ES + Y+ +SDV+SFG++ +EI+T G P+ + +
Sbjct: 211 QGRIPVKWMA---------IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPE 259
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ ++ G R P + + + L +CW +P++RP F+ I + L
Sbjct: 260 RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L ++H NI+ L FT EE ++ +L+MELM +LC I + +R+ +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSY- 128
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 129 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 171
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S + P++ + APEV+ Y E D++S G I E++ G
Sbjct: 172 ---RTASTNFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGELVKG 219
Query: 446 KVPFE 450
V F+
Sbjct: 220 SVIFQ 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 34/238 (14%)
Query: 281 LSHPNIMHFLCGFTDEEKKEC------------FLIMELMSRDLCSYIKEICCPRKRIPF 328
L HPN++ L T ++ FL+M D+ S + P
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP- 144
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
P V L+ QIA GMEYL S + H +L N+L+ + L+ KIS GL
Sbjct: 145 --PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREV 195
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKV 447
+ P W APE + K+S SD++S+G++ +E+ + G
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAI---------MYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
P+ + IR + P P +V L CW+ P++RP F I LR
Sbjct: 247 PY--CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 34/238 (14%)
Query: 281 LSHPNIMHFLCGFTDEEKKEC------------FLIMELMSRDLCSYIKEICCPRKRIPF 328
L HPN++ L T ++ FL+M D+ S + P
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP- 127
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
P V L+ QIA GMEYL S + H +L N+L+ + L+ KIS GL
Sbjct: 128 --PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREV 178
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKV 447
+ P W APE + K+S SD++S+G++ +E+ + G
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAI---------MYGKFSIDSDIWSYGVVLWEVFSYGLQ 229
Query: 448 PFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
P+ + IR + P P +V L CW+ P++RP F I LR
Sbjct: 230 PY--CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 30/244 (12%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFS 329
+ E S + HPNI+ T+ ++ E M L S+++ F+
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTN--SMPVMILTEFMENGALDSFLR-----LNDGQFT 116
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
+ V ++ IA GM YL H +L NIL+ L K+S FGLS
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN-------LVCKVSDFGLSRFLE 169
Query: 390 FGPKSPSQS---GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
P+++ G P W APE + + K++ SD +S+G++ +E+++ G
Sbjct: 170 ENSSDPTETSSLGGKIPIRWTAPEAI---------AFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ D + + I R P P + L CW D N RP F + L
Sbjct: 221 ERPYWD--MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
Query: 506 YIKR 509
+ R
Sbjct: 279 KMIR 282
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
QI++GM+YL K+ H +L NIL+ EG KIS FGLS +S
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILV------AEGR-KMKISDFGLSRDVYEEDSYVKRS 210
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W A ES + Y+ +SDV+SFG++ +EI+T G P+ + +
Sbjct: 211 QGRIPVKWMA---------IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPE 259
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ ++ G R P + + + L +CW +P++RP F+ I + L
Sbjct: 260 RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 235 EDYQVRRRLGSGS----------QYKEILWLGESFALRHFFGDIE-PLVPEISSLLSLSH 283
ED+ + R LG G Q K IL L F + +E L E+ L H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ F D + +LI+E L + +E+ +K F + ++A
Sbjct: 72 PNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSRFDEQRTATYITELANA 124
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y HSK++ H ++ P N+LL G KI+ FG S V + + GT
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNG-------ELKIADFGWS-VHAPSSRRDTLCGT--- 173
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ PE++E + EK D++S G++C+E L G PFE AH + R
Sbjct: 174 LDYLPPEMIE---------GRMHDEKVDLWSLGVLCYEFLVGMPPFE-AHTYQETYRRIS 223
Query: 464 RAGERPLFPFHSPKYVT----NLTKRCWHADPNQRPSFSSI 500
R F P +VT +L R + +QR + + +
Sbjct: 224 RV------EFTFPDFVTEGARDLISRLLKHNASQRLTLAEV 258
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 50/285 (17%)
Query: 233 KSEDYQVRRRLGSGS---QYK-EILWLGESFALRHF-------FGDIEPLVPEISSLLSL 281
K ED++V LG GS Y+ E + G A++ G ++ + E+ L
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMEL-----MSRDLCSYIKEICCPRKRIPFSLPVAVDL 336
HP+I+ F E+ +L++E+ M+R L + +K PFS A
Sbjct: 69 KHPSILELYNYF--EDSNYVYLVLEMCHNGEMNRYLKNRVK---------PFSENEARHF 117
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKSP 395
M QI GM YLHS I H +L SN+LL ++ KI+ FGL++ +K K
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRN-------MNIKIADFGLATQLKMPHEKHY 170
Query: 396 SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQ 455
+ GT + + +PE+ A+ S + +SDV+S G + + +L G+ PF+ ++
Sbjct: 171 TLCGTPN---YISPEI---------ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK 218
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ E P F K +L + +P R S SS+
Sbjct: 219 NTLNKVVLADYEMPSFLSIEAK---DLIHQLLRRNPADRLSLSSV 260
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
+QIA+GM YL + H NL N+LLK +++ FG++ + K
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-------QVQVADFGVADLLPPDDKQLLY 192
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
S P W A ES KY+ +SDV+S+G+ +E++T G P+ A L+
Sbjct: 193 SEAKTPIKWMA---------LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY--AGLRL 241
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC----RILRYIKRFIM 512
++ + GER P V + +CW D N RP+F + R+ R R+++
Sbjct: 242 AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLV 301
Query: 513 M----NPHYNSQPDP 523
+ P P+P
Sbjct: 302 IKRESGPGIAPGPEP 316
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 30/244 (12%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRD-LCSYIKEICCPRKRIPFS 329
+ E S + HPNI+ T+ ++ E M L S+++ F+
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTN--SMPVMILTEFMENGALDSFLR-----LNDGQFT 114
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV-- 387
+ V ++ IA GM YL H +L NIL+ L K+S FGLS
Sbjct: 115 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN-------LVCKVSDFGLSRFLE 167
Query: 388 -KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-G 445
+ P S G P W APE + + K++ SD +S+G++ +E+++ G
Sbjct: 168 ENSSDPTYTSSLGGKIPIRWTAPEAI---------AFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+ P+ D + + I R P P + L CW D N RP F + L
Sbjct: 219 ERPYWD--MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
Query: 506 YIKR 509
+ R
Sbjct: 277 KMIR 280
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 237 YQVRRRLGSGSQYKEILWL----GESFALRHFFGDIEP-----LVPEISSLLSLSHPNIM 287
++++ RLG+G + W+ GE A++ ++ P EI + L+HPN++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 288 ---HFLCGFTDEEKKEC-FLIMELM-SRDLCSYIK--EICCPRKRIPFSLPVAVDLMLQI 340
G + L ME DL Y+ E CC K P L+ I
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDI 131
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+ + YLH +I H +L P NI+L+P + +H KI G + + G GT
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQP---GPQRLIH-KIIDLGYAKELDQGELCTEFVGT 187
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+LE+ KY+ D +SFG + FE +TG PF
Sbjct: 188 LQ---YLAPELLEQ---------KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 237 YQVRRRLGSGSQYKEILWL----GESFALRHFFGDIEP-----LVPEISSLLSLSHPNIM 287
++++ RLG+G + W+ GE A++ ++ P EI + L+HPN++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 288 ---HFLCGFTDEEKKEC-FLIMELM-SRDLCSYIK--EICCPRKRIPFSLPVAVDLMLQI 340
G + L ME DL Y+ E CC K P L+ I
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDI 130
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+ + YLH +I H +L P NI+L+P + +H KI G + + G GT
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQP---GPQRLIH-KIIDLGYAKELDQGELCTEFVGT 186
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+LE+ KY+ D +SFG + FE +TG PF
Sbjct: 187 LQ---YLAPELLEQ---------KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
+QIA+GM YL + H NL N+LLK +++ FG++ + K
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-------QVQVADFGVADLLPPDDKQLLY 174
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQG 456
S P W A ES KY+ +SDV+S+G+ +E++T G P+ A L+
Sbjct: 175 SEAKTPIKWMA---------LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY--AGLRL 223
Query: 457 DKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC----RILRYIKRFIM 512
++ + GER P V + +CW D N RP+F + R+ R R+++
Sbjct: 224 AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLV 283
Query: 513 M----NPHYNSQPDP 523
+ P P+P
Sbjct: 284 IKRESGPGIAPGPEP 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 233 KSEDYQVRRRLGSGS-----------QYKEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
++EDY+V +G+GS K ++W + + + LV E++ L L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG-SMTEAEKQMLVSEVNLLREL 62
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
HPNI+ + D +++ME DL S I + R+ + + V M Q+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV--MTQL 120
Query: 341 ARGMEYLHSKK-----IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSP 395
++ H + + H +L P+N+ L +G + K+ FGL+ + N S
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFL-------DGKQNVKLGDFGLARILNH-DTSF 172
Query: 396 SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQ 455
+++ P+ + +PE + + Y+EKSD++S G + +E+ PF
Sbjct: 173 AKTFVGTPY-YMSPEQM---------NRMSYNEKSDIWSLGCLLYELCALMPPF--TAFS 220
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+++ IR G+ P+ + + R + RPS I
Sbjct: 221 QKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 233 KSEDYQVRRRLGSGS-----------QYKEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
++EDY+V +G+GS K ++W + + + LV E++ L L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG-SMTEAEKQMLVSEVNLLREL 62
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
HPNI+ + D +++ME DL S I + R+ + + V M Q+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV--MTQL 120
Query: 341 ARGMEYLHSKK-----IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSP 395
++ H + + H +L P+N+ L +G + K+ FGL+ + N S
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFL-------DGKQNVKLGDFGLARILNH-DTSF 172
Query: 396 SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQ 455
+++ P+ + +PE + + Y+EKSD++S G + +E+ PF
Sbjct: 173 AKAFVGTPY-YMSPEQM---------NRMSYNEKSDIWSLGCLLYELCALMPPF--TAFS 220
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+++ IR G+ P+ + + R + RPS I
Sbjct: 221 QKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
Q+A+GME+L K H +L N+L+ T G + KI FGL+ +
Sbjct: 180 QVAKGMEFLEFKSCVHRDLAARNVLV------THGKV-VKICDFGLARDIMSDSNYVVRG 232
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W APE L E Y+ KSDV+S+G++ +EI + G P+ + +
Sbjct: 233 NARLPVKWMAPESLFE---------GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
+ I+ G + PF++ + + + + CW D +RPSF ++ L
Sbjct: 284 -FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
QI++GM+YL + H +L NIL+ EG KIS FGLS +S
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILV------AEGR-KMKISDFGLSRDVYEEDSXVKRS 210
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGD 457
P W A ES + Y+ +SDV+SFG++ +EI+T G P+ + +
Sbjct: 211 QGRIPVKWMA---------IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPE 259
Query: 458 KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
++ ++ G R P + + + L +CW +P++RP F+ I + L
Sbjct: 260 RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 39/268 (14%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
++ L E+ + L+HPNI+ E +K +L+ME S ++ Y+ +++
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK- 106
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 107 -----EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSN 154
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTG 445
FG K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 155 EFTFGNKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSG 202
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 203 SLPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI----- 254
Query: 506 YIKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 255 -MKDRWMNVGHEDDELKPYVEPLPDYKD 281
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 EKEARAK--FRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSNE 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
FG K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 163 FTFGNKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 211 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI------ 261
Query: 507 IKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 262 MKDRWMNVGHEDDELKPYVAPLPDYKD 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 EKEARAK--FRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSNE 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
FG K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 163 FTFGNKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 211 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI------ 261
Query: 507 IKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 262 MKDRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 40/285 (14%)
Query: 233 KSEDYQVRRRLGSGS-----------QYKEILWLGESFALRHFFGDIEPLVPEISSLLSL 281
++EDY+V +G+GS K ++W + + + LV E++ L L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG-SMTEAEKQMLVSEVNLLREL 62
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
HPNI+ + D +++ME DL S I + R+ + + V M Q+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV--MTQL 120
Query: 341 ARGMEYLHSKK-----IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSP 395
++ H + + H +L P+N+ L +G + K+ FGL+ + N
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFL-------DGKQNVKLGDFGLARILNHDEDFA 173
Query: 396 SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQ 455
+ T P+ + +PE + + Y+EKSD++S G + +E+ PF
Sbjct: 174 KEFVGT-PY-YMSPEQM---------NRMSYNEKSDIWSLGCLLYELCALMPPF--TAFS 220
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+++ IR G+ P+ + + R + RPS I
Sbjct: 221 QKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 EKEARAK--FRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSNE 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
FG K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 163 FTFGNKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 211 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI------ 261
Query: 507 IKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 262 MKDRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G+I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGVIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F++MELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 124 FILMELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 181
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 182 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 235
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 236 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 286
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 287 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 EKEARAK--FRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSNE 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
FG K + G + APE+ + KY + DV+S G+I + +++G
Sbjct: 163 FTFGNKLDAFCGAPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 211 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI------ 261
Query: 507 IKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 262 MKDRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 132
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 133 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 175
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S PF+ + APEV+ Y E D++S G I E++ G
Sbjct: 176 ---RTAGTSFMMVPFVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 223
Query: 446 KVPF 449
V F
Sbjct: 224 GVLF 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 109/251 (43%), Gaps = 38/251 (15%)
Query: 274 EISSLLSLSHPNIMHF--LCGFTDEEKKECFLIMELMSR-DLCSYIKE------ICC--- 321
E L +L H +I+ F +CG D ++ E M DL +++ I
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDP----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 322 PRK-RIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKIS 380
PR+ + L + + QIA GM YL S+ H +L N L+ GA+ L KI
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GAN----LLVKIG 175
Query: 381 GFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICF 440
FG+S T P W PE S K++ +SDV+SFG+I +
Sbjct: 176 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---------SIMYRKFTTESDVWSFGVILW 226
Query: 441 EILT-GKVP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFS 498
EI T GK P F+ ++ + + R ERP PK V ++ CW +P QR +
Sbjct: 227 EIFTYGKQPWFQLSNTEVIECITQGRVLERPRV---CPKEVYDVMLGCWQREPQQRLNIK 283
Query: 499 SICRILRYIKR 509
I +IL + +
Sbjct: 284 EIYKILHALGK 294
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI GFGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILGFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F++MELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 109 FILMELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 166
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 167 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 220
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 221 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 271
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 272 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G+I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGVIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 EKEARAK--FRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADMNIKIADFGFSNE 162
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
FG K G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 163 FTFGNKLDEFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I
Sbjct: 211 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQI------ 261
Query: 507 IKRFIMMNPHYNSQPDPPM-PLVDYSD 532
+K M H + + P + PL DY D
Sbjct: 262 MKDRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWLGESFALRHFFGDIE------PLVPEISSLLSLSHPN 285
E Y ++G G+ YK GE+FAL+ + E + EIS L L H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 IMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGME 345
I+ KK L+ E + +DL + ++C A +LQ+ G+
Sbjct: 62 IVKLYDVI--HTKKRLVLVFEHLDQDLKKLL-DVC----EGGLESVTAKSFLLQLLNGIA 114
Query: 346 YLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
Y H +++ H +L P N+L+ G KI+ FGL+ + FG +
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREG-------ELKIADFGLA--RAFGIPVRKYTHEVVTLW 165
Query: 406 WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR 464
+ AP+VL + KYS D++S G I E++ G P + D++ R R
Sbjct: 166 YRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFR 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWLGESFALRHFFGDIE------PLVPEISSLLSLSHPN 285
E Y ++G G+ YK GE+FAL+ + E + EIS L L H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 IMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGME 345
I+ KK L+ E + +DL + ++C A +LQ+ G+
Sbjct: 62 IVKLYDVI--HTKKRLVLVFEHLDQDLKKLL-DVC----EGGLESVTAKSFLLQLLNGIA 114
Query: 346 YLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
Y H +++ H +L P N+L+ G KI+ FGL+ + FG +
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREG-------ELKIADFGLA--RAFGIPVRKYTHEVVTLW 165
Query: 406 WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR 464
+ AP+VL + KYS D++S G I E++ G P + D++ R R
Sbjct: 166 YRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-APLFPGVSEADQLMRIFR 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 24/231 (10%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM-- 337
L+H NI+ C + F+++ELM+ DL S+++E PR P SL + +DL+
Sbjct: 91 LNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHV 146
Query: 338 -LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
IA G +YL H ++ N LL G AKI FG++
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRK 202
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
P W PE E ++ K+D +SFG++ +EI + G +P+ Q
Sbjct: 203 GGCAMLPVKWMPPEAFMEG---------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
++ + +G R P + P V + +CW P RP+F+ I + Y
Sbjct: 254 --EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 302
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM-- 337
L+H NI+ C + F+++ELM+ DL S+++E PR P SL + +DL+
Sbjct: 105 LNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHV 160
Query: 338 -LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
IA G +YL H ++ N LL G AKI FG++
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRK 216
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQ 455
P W PE E ++ K+D +SFG++ +EI + G +P+ Q
Sbjct: 217 GGCAMLPVKWMPPEAFMEG---------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
++ + +G R P + P V + +CW P RP+F+ I + Y +
Sbjct: 268 --EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +LIME S + + R+
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYAS---GGEVFDYLVAHGRM- 108
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K+I H +L N+LL + ++ KI+ FG S+
Sbjct: 109 -KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-------DADMNIKIADFGFSNE 160
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
G K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 161 FTVGGKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 208
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+PF+ +L+ + R +R R PF+ NL KR +P +R + I +
Sbjct: 209 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-------ELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIP 327
E L E S L HP+I+ L ++ + +++ E M DLC I +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI--VKRADAGFV 126
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-S 386
+S VA M QI + Y H I H ++ P N+LL AS E K+ FG++
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLL----ASKENSAPVKLGDFGVAIQ 182
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G + + GT H + APEV++ Y + DV+ G+I F +L+G
Sbjct: 183 LGESGLVAGGRVGTPH---FMAPEVVK---------REPYGKPVDVWGCGVILFILLSGC 230
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
+PF + +++ I G+ + P H + +L +R DP +R
Sbjct: 231 LPF---YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAER 278
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 235 EDYQVRRRLGSGSQ---YKEILWLGESFALRHFFGDIE------PLVPEISSLLSLSHPN 285
E Y ++G G+ YK GE+FAL+ + E + EIS L L H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 IMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGME 345
I+ KK L+ E + +DL + ++C A +LQ+ G+
Sbjct: 62 IVKLYDVI--HTKKRLVLVFEHLDQDLKKLL-DVC----EGGLESVTAKSFLLQLLNGIA 114
Query: 346 YLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
Y H +++ H +L P N+L+ G KI+ FGL+ + FG +
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREG-------ELKIADFGLA--RAFGIPVRKYTHEIVTLW 165
Query: 406 WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR 464
+ AP+VL + KYS D++S G I E++ G P + D++ R R
Sbjct: 166 YRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFR 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL+ H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 130
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 131 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTS-------DLKICDFGLARVAD- 177
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 178 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 227 RPIFPGKH 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
AV L +ARGM +LH+ + L P + L R + + A+IS ++ VK F
Sbjct: 113 AVKFALDMARGMAFLHTLE----PLIPRHAL-NSRSVMIDEDMTARIS---MADVK-FSF 163
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+SP G + W APE L++ + + +D++SF ++ +E++T +VPF D
Sbjct: 164 QSP---GRMYAPAWVAPEALQKKPEDTN------RRSADMWSFAVLLWELVTREVPFADL 214
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIK 508
M + G RP P +V+ L K C + DP +RP F I IL ++
Sbjct: 215 SNMEIGMKVALE-GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 174
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 222
Query: 446 KVPF 449
V F
Sbjct: 223 GVLF 226
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 110 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 167
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 168 AARNCLLTCPGPGRV----AKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 221
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 222 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 272
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 273 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
HP+I+ + + E FL+ +LM + +L Y+ E ++ S +M +
Sbjct: 158 GHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTE------KVALSEKETRSIMRSL 209
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+ +LH+ I H +L P NILL + + ++S FG S G K GT
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILL-------DDNMQIRLSDFGFSCHLEPGEKLRELCGT 262
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
+ APE+L + + ++ Y ++ D+++ G+I F +L G PF H + M
Sbjct: 263 PG---YLAPEIL---KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF--WHRRQILML 314
Query: 461 RNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
R I G+ + F SP++ V +L R DP R
Sbjct: 315 RMIMEGQ---YQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 136 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 193
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 194 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 247
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 248 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 298
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 299 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 328
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L L H N++ L FT E+ E +L+ LM DL + +K + + F
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ RG++Y+HS I H +L PSN+ + +I FGL+ +
Sbjct: 136 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-------ELRILDFGLARQAD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+L GK F
Sbjct: 183 -----EEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 124 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 181
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 182 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--- 234
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 235 ------GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 286
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 287 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 316
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 126 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 183
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 184 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 237
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 238 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 288
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 289 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 318
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 110 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 167
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 168 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 221
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 222 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 272
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 273 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 302
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 116 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 173
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 174 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 227
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 228 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 278
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 279 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 308
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 274 EISSL-LSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLP 331
EI++L L HPNI+ F D+ FL+MEL++ +L IK K+ FS
Sbjct: 55 EITALKLCEGHPNIVKLHEVFHDQ--LHTFLVMELLNGGELFERIK------KKKHFSET 106
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
A +M ++ + ++H + H +L P N+L + E KI FG + +K
Sbjct: 107 EASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLE----IKIIDFGFARLK--- 159
Query: 392 PKSPSQSGTTHPFIWH--APEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+Q T F H APE+L +N Y E D++S G+I + +L+G+VPF
Sbjct: 160 -PPDNQPLKTPCFTLHYAAPELLNQN---------GYDESCDLWSLGVILYTMLSGQVPF 209
Query: 450 E--DAHLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQRPSFSSI 500
+ D L ++ ++ F F + +L + DPN+R S +
Sbjct: 210 QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +LIME S + + R+
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYAS---GGEVFDYLVAHGRM- 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K+I H +L N+LL + ++ KI+ FG S+
Sbjct: 112 -KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-------DADMNIKIADFGFSNE 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
G K + G + APE+ + KY + DV+S G+I + +++G
Sbjct: 164 FTVGGKLDAFCGAPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 211
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
+PF+ +L+ + R +R R PF+ NL KR +P +R + I +
Sbjct: 212 LPFDGQNLK-ELRERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 101 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 158
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 159 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 212
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 213 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 263
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 264 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 296
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 128
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 129 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKIXDFGLARVAD- 175
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 176 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 225 RPIFPGKH 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 109 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 166
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 167 AARNCLLTCPGPGRV----AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG-- 220
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 221 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 271
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 272 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 124
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 167
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 215
Query: 446 KVPF 449
K+ F
Sbjct: 216 KILF 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 127 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 184
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 185 AARNCLLTCPGPGRV----AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG-- 238
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 239 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 289
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRY 506
V + +CW P RP+F+ I + Y
Sbjct: 290 GPVYRIMTQCWQHQPEDRPNFAIILERIEY 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 124
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 167
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 215
Query: 446 KVPF 449
K+ F
Sbjct: 216 KILF 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 130 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 172
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 173 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 220
Query: 446 KVPF 449
K+ F
Sbjct: 221 KILF 224
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 38/203 (18%)
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSK---KIYHGNLNPSNILLKPRGASTEGYLHAK 378
P + P P + L ARG+ YLH KI H ++ +NILL A
Sbjct: 122 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE-------FEAV 174
Query: 379 ISGFGLSSVKNFGPKSPSQSGTTHPFIWH-APEVLEENEQTESASNSKYSEKSDVYSFGM 437
+ FGL+ + ++ K I H APE L S K SEK+DV+ +G+
Sbjct: 175 VGDFGLAKLMDY--KDXHVXXAVRGXIGHIAPEYL---------STGKSSEKTDVFGYGV 223
Query: 438 ICFEILTGKVPFEDAHLQGD----------------KMSRNIRAGERPLFPFHSPKYVTN 481
+ E++TG+ F+ A L D K+ + + + + +
Sbjct: 224 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ 283
Query: 482 LTKRCWHADPNQRPSFSSICRIL 504
+ C + P +RP S + R+L
Sbjct: 284 VALLCTQSSPMERPKMSEVVRML 306
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 123
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 124 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 166
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 167 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 214
Query: 446 KVPF 449
K+ F
Sbjct: 215 KILF 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 174
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 222
Query: 446 KVPF 449
K+ F
Sbjct: 223 KILF 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 174
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 222
Query: 446 KVPF 449
K+ F
Sbjct: 223 KILF 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL+ H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 130
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 131 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 177
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 178 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 227 RPIFPGKH 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 28/225 (12%)
Query: 234 SEDYQVRRRLGSGSQ---YKEI-LWLGESFALRHFFGDIEPLVP-----EISSLLSLSHP 284
S ++ +LG+G+ YK + G AL+ D E P EIS + L H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
NI+ E K L+ E M DL Y+ L + Q+ +G+
Sbjct: 64 NIVRLYDVIHTENK--LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ H KI H +L P N+L+ RG K+ FGL+ + FG + S
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRG-------QLKLGDFGLA--RAFGIPVNTFSSEVVTL 172
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ AP+VL + YS D++S G I E++TGK F
Sbjct: 173 WYRAPDVL--------MGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM---LQIARGMEYLHSKKIYHGNL 357
F+++ELM+ DL S+++E PR P SL + +DL+ IA G +YL H ++
Sbjct: 150 FILLELMAGGDLKSFLRETR-PRPSQPSSLAM-LDLLHVARDIACGCQYLEENHFIHRDI 207
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
N LL G AKI FG++ P W PE E
Sbjct: 208 AARNCLLTCPGPGRV----AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG-- 261
Query: 418 TESASNSKYSEKSDVYSFGMICFEILT-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSP 476
++ K+D +SFG++ +EI + G +P+ Q ++ + +G R P + P
Sbjct: 262 -------IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCP 312
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKR 509
V + +CW P RP+F+ I + Y +
Sbjct: 313 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 47/204 (23%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
PF ++ +I +G++YLHS+K H ++ +N+LL +G K++ FG++
Sbjct: 116 PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-------DVKLADFGVAG 168
Query: 387 -VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
+ + K + GT PF W APEV+++ S Y K+D++S G+ E+ G
Sbjct: 169 QLTDTQIKRNTFVGT--PF-WMAPEVIQQ---------SAYDSKADIWSLGITAIELAKG 216
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPF---HSPKYVTNLTKR-------CWHADPNQRP 495
+ P D H R LF + P V + TK C + DP+ RP
Sbjct: 217 EPPNSDMHPM------------RVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRP 264
Query: 496 SFSSICRILRYIKRFIMMNPHYNS 519
+ + + +FI+ N S
Sbjct: 265 TAKELLK-----HKFIVKNSKKTS 283
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 244 GSGSQYKEI-LWLGESFALRHFFGDIEP----LVPEISSLLSLSHPNIMHFLCGFTDEEK 298
SG+ Y + + G+ A+R +P ++ EI + +PNI+++L + +
Sbjct: 33 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD- 91
Query: 299 KECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNL 357
E +++ME L L + E C +I + + + +E+LHS ++ H N+
Sbjct: 92 -ELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHSNQVIHRNI 143
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
NILL G+ K++ FG + P+ +S W APEV+
Sbjct: 144 KSDNILLGMDGS-------VKLTDFGFCA--QITPEQSKRSTMVGTPYWMAPEVV----- 189
Query: 418 TESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ Y K D++S G++ E++ G+ P+
Sbjct: 190 ----TRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-------ELKILDFGLCRHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 115/245 (46%), Gaps = 33/245 (13%)
Query: 266 GDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRK 324
++ + E+ + L HP +++ F DEE + F++++L+ DL ++++
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLLLGGDLRYHLQQ------ 108
Query: 325 RIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL 384
+ F + ++ ++YL +++I H ++ P NILL G H I+ F +
Sbjct: 109 NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-------HVHITDFNI 161
Query: 385 SSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+++ + + +GT P++ APE+ S + YS D +S G+ +E+L
Sbjct: 162 AAMLPRETQITTMAGTK-PYM--APEMF------SSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 445 GKVPFEDAHLQGDKMSRNI-RAGERPLFPFHSP--KYVTNLTKRCWHADPNQRPSFSSIC 501
G+ P+ H++ S+ I E + + S + + +L K+ +P+QR FS +
Sbjct: 213 GRRPY---HIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR--FSQLS 267
Query: 502 RILRY 506
+ +
Sbjct: 268 DVQNF 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 39/185 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L ++H NI+ L FT EE ++ +L+MELM +LC I + +R+ +
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + P++ + APEV+ Y+ D++S G I E++ G
Sbjct: 174 ---RTACTNFMMTPYVVTRYYRAPEVI---------LGMGYAANVDIWSVGCIMGELVKG 221
Query: 446 KVPFE 450
V F+
Sbjct: 222 CVIFQ 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 128
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 129 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKICDFGLARVAD- 175
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 176 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 225 RPIFPGKH 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 49/236 (20%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGESFALRHFFGDIEPLVP-------------EISSL 278
I +E Y++ +LG G ++L E L +P E+ +
Sbjct: 8 IINERYKIVDKLGGGGM--STVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 279 LSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLM 337
LSH NI+ + DEE +L+ME + L YI+ P S+ A++
Sbjct: 66 SQLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIE------SHGPLSVDTAINFT 117
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
QI G+++ H +I H ++ P NIL+ KI FG++ K S +Q
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKT-------LKIFDFGIA--KALSETSLTQ 168
Query: 398 S----GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ GT F +P E A E +D+YS G++ +E+L G+ PF
Sbjct: 169 TNHVLGTVQYF---SP---------EQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 166
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 167 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 214
Query: 448 PF 449
PF
Sbjct: 215 PF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 109
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 166
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 167 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 214
Query: 448 PF 449
PF
Sbjct: 215 PF 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIP 327
E L E S L HP+I+ L ++ + +++ E M DLC I +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI--VKRADAGFV 126
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-S 386
+S VA M QI + Y H I H ++ P +LL AS E K+ GFG++
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL----ASKENSAPVKLGGFGVAIQ 182
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G + + GT H + APEV++ Y + DV+ G+I F +L+G
Sbjct: 183 LGESGLVAGGRVGTPH---FMAPEVVKRE---------PYGKPVDVWGCGVILFILLSGC 230
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
+PF + +++ I G+ + P H + +L +R DP +R
Sbjct: 231 LPF---YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAER 278
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-------ELKILDFGLARHTD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 183 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIP 327
E L E S L HP+I+ L ++ + +++ E M DLC I +
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI--VKRADAGFV 128
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-S 386
+S VA M QI + Y H I H ++ P +LL AS E K+ GFG++
Sbjct: 129 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL----ASKENSAPVKLGGFGVAIQ 184
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G + + GT H + APEV++ Y + DV+ G+I F +L+G
Sbjct: 185 LGESGLVAGGRVGTPH---FMAPEVVKRE---------PYGKPVDVWGCGVILFILLSGC 232
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
+PF + +++ I G+ + P H + +L +R DP +R
Sbjct: 233 LPF---YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAER 280
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 168
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 169 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 211
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 212 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 259
Query: 446 KVPF 449
K+ F
Sbjct: 260 KILF 263
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +L+ LM DL +K I +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-- 148
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 149 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKICDFGLARVAD- 195
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 196 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 245 RPIFPGKH 252
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 128
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 129 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKICDFGLARVAD- 175
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 176 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 225 RPIFPGKH 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKE---ICCPRKRIPFSL 330
EI L LSHPNI+ L F K L+ + M DL IK+ + P +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFG--HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAY-- 117
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
ML +G+EYLH I H +L P+N+LL G K++ FGL+ K+F
Sbjct: 118 ------MLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-------LKLADFGLA--KSF 162
Query: 391 GPKSPSQSGTTHPFI---WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G SP+++ H + + APE+L Y D+++ G I E+L +V
Sbjct: 163 G--SPNRA-YXHQVVTRWYRAPELL--------FGARMYGVGVDMWAVGCILAELLL-RV 210
Query: 448 PFEDAHLQGDKMSR 461
PF D+++R
Sbjct: 211 PFLPGDSDLDQLTR 224
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 48/289 (16%)
Query: 242 RLGSGSQYKEILWLGESFALRHF------FGDIEPLVPEISSLLSLSHPNIMHFLCGFTD 295
R G G YK L G A++ G+++ E+ + H N++ L GF
Sbjct: 48 RGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ-FQTEVEMISMAVHRNLLR-LRGFCM 105
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK---KI 352
+ + + + + S ++E P + P P + L ARG+ YLH KI
Sbjct: 106 TPTERLLVYPYMANGSVASCLRE--RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 353 YHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH-APEV 411
H ++ +NILL A + FGL+ + ++ K I H APE
Sbjct: 164 IHRDVKAANILLDEE-------FEAVVGDFGLAKLMDY--KDXHVXXAVRGTIGHIAPEY 214
Query: 412 LEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD-------------- 457
L S K SEK+DV+ +G++ E++TG+ F+ A L D
Sbjct: 215 L---------STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 458 --KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
K+ + + + + + + C + P +RP S + R+L
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-------ELKILDFGLARHTD 178
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 179 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD-------LKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT F+ APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTP-AFV--APEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI+EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 126
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 127 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 173
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 174 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 222
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 223 RPIFPGKH 230
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +LC I ++ +R+ +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSY- 168
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 169 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 211
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 212 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 259
Query: 446 KVPF 449
K+ F
Sbjct: 260 KILF 263
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 128
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 129 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 175
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 176 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 225 RPIFPGKH 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLAR--- 180
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 181 --HTADEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-------ELKILDFGLARHTD 181
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 182 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 136
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 137 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 183
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 184 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 232
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 233 RPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 128
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 129 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 175
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 176 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 225 RPIFPGKH 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 130
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 131 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 177
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 178 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 227 RPIFPGKH 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 126
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 127 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 173
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 174 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 222
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 223 RPIFPGKH 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 140
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 141 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------XELKILDFGLARHTD 187
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 188 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF- 125
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 172
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 173 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLAR--- 180
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 181 --HTADEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-------ELKILDFGLARHTD 181
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 182 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 133
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 134 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 180
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 181 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 229
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 230 RPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 134
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 135 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 181
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 182 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 230
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 231 RPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 125
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 126 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 172
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 173 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 221
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 222 RPIFPGKH 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLAR--- 180
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 181 --HTADEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGXVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 148
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 149 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 195
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 196 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 245 RPIFPGKH 252
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAG 177
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ T + + APEV+ Y E D++S G I E++ G V F
Sbjct: 178 TSFMMTPEVVTRY---YRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAV--DLMLQIA 341
P I+ F E +C++ MELMS + K + + +P + + L
Sbjct: 81 PYIVQFYGALFRE--GDCWICMELMSTSFDKFYKYVYSVLDDV---IPEEILGKITLATV 135
Query: 342 RGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
+ + +L KI H ++ PSNILL G + K+ FG+S + + ++
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDRSG-------NIKLCDFGISG-QLVDSIAKTRDAG 187
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMS 460
P++ APE ++ SAS Y +SDV+S G+ +E+ TG+ P+ + D+++
Sbjct: 188 CRPYM--APERIDP-----SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT 240
Query: 461 RNIRAGERPLFPFH-----SPKYVTNLTKRCWHADPNQRPSFSSICR---ILRYIKRFI 511
+ ++ G+ P SP ++ N C D ++RP + + + IL Y +R +
Sbjct: 241 QVVK-GDPPQLSNSEEREFSPSFI-NFVNLCLTKDESKRPKYKELLKHPFILMYEERAV 297
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 139
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 140 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 186
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 187 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 188
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 189 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 188
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 189 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 181
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 182 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 128
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 129 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 175
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 176 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKE----------CFLIMELMSR-DLCSYIK 317
E ++ E+ +L L HP I+ + + ++ E ++ M+L + +L ++
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107
Query: 318 EICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHA 377
C +R V + + LQIA +E+LHSK + H +L PSNI
Sbjct: 108 GRCTIEER---ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-------V 157
Query: 378 KISGFGL----------SSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYS 427
K+ FGL +V P +G ++ +PE + N YS
Sbjct: 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN---------SYS 208
Query: 428 EKSDVYSFGMICFEIL 443
K D++S G+I FE+L
Sbjct: 209 HKVDIFSLGLILFELL 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 188
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 189 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 183
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 184 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 140
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 141 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 187
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 188 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 178
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 179 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
+ ++ E+ L L HPN + + + E +L+ME ++ P + +
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYCLGSASDLLEVHKKPLQEVEI 117
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ L +G+ YLHS + H ++ NILL G K+ FG +S+
Sbjct: 118 AAVTHGAL-----QGLAYLHSHNMIHRDVKAGNILLSEPGL-------VKLGDFGSASI- 164
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+P+ P+ W APEV+ ++ +Y K DV+S G+ C E+ K P
Sbjct: 165 ----MAPANXFVGTPY-WMAPEVILAMDE------GQYDGKVDVWSLGITCIELAERKPP 213
Query: 449 FEDAHLQGDKMSRNIRAGERP-LFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
++ +I E P L H +Y N C P RP+ S + R++
Sbjct: 214 L--FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT-SEVLLKHRFV 270
Query: 508 KR 509
R
Sbjct: 271 LR 272
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L L H N++ L FT E+ E +L+ LM DL + +K + + F
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ RG++Y+HS I H +L PSN+ + +I FGL+ +
Sbjct: 136 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-------ELRILDFGLARQAD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+L GK F
Sbjct: 183 -----EEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 183 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKS 394
++ +I +G++YLHS+K H ++ +N+LL G K++ FG++ + + K
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-------EVKLADFGVAGQLTDTQIKR 181
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHL 454
+ GT PF W APEV+++ S Y K+D++S G+ E+ G+ P + H
Sbjct: 182 NTFVGT--PF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHSELHP 229
Query: 455 QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR---ILRYIKR 509
K+ I P + K + + C + +P+ RP+ + + ILR K+
Sbjct: 230 M--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 178
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 179 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 178
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 179 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 27/185 (14%)
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKS 394
++ +I +G++YLHS+K H ++ +N+LL G K++ FG++ + + K
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-------EVKLADFGVAGQLTDTQIKR 161
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHL 454
+ GT PF W APEV+++ S Y K+D++S G+ E+ G+ P + H
Sbjct: 162 NTFVGT--PF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHSELHP 209
Query: 455 QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMN 514
K+ I P + K + + C + +P+ RP+ + + +FI+ N
Sbjct: 210 M--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK-----HKFILRN 262
Query: 515 PHYNS 519
S
Sbjct: 263 AKKTS 267
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 148
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 149 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 195
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 196 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 181
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 182 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 126
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 127 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 173
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 174 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 126
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 127 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 173
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 174 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 196
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 197 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 172
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 173 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 148
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 149 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 195
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 196 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 196
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 197 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 152
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 153 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 199
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 200 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 183 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 127
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 128 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 174
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 175 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 25/229 (10%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
+PL EI+ L H NI+ +L F++ + F+ ++ L + ++ P K
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQ 108
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
++ QI G++YLH +I H ++ N+L+ + G L KIS FG S K
Sbjct: 109 TIGFYTK---QILEGLKYLHDNQIVHRDIKGDNVLIN----TYSGVL--KISDFGTS--K 157
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+P T + APE++++ + Y + +D++S G E+ TGK P
Sbjct: 158 RLAGINPCTETFTGTLQYMAPEIIDKGPRG-------YGKAADIWSLGCTIIEMATGKPP 210
Query: 449 FEDAHLQGDKMSRNIRAGE---RPLFPFHSPKYVTNLTKRCWHADPNQR 494
F + G+ + + G P P +C+ DP++R
Sbjct: 211 FYEL---GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMAGFVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 25/229 (10%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
+PL EI+ L H NI+ +L F++ + F+ ++ L + ++ P K
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQ 122
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
++ QI G++YLH +I H ++ N+L+ + G L KIS FG S K
Sbjct: 123 TIGFYTK---QILEGLKYLHDNQIVHRDIKGDNVLIN----TYSGVL--KISDFGTS--K 171
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+P T + APE++++ + Y + +D++S G E+ TGK P
Sbjct: 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRG-------YGKAADIWSLGCTIIEMATGKPP 224
Query: 449 FEDAHLQGDKMSRNIRAGE---RPLFPFHSPKYVTNLTKRCWHADPNQR 494
F + G+ + + G P P +C+ DP++R
Sbjct: 225 FYEL---GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 172
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 173 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMAGFVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 182
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 183 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 244 GSGSQYKEI-LWLGESFALRHFFGDIEP----LVPEISSLLSLSHPNIMHFLCGFTDEEK 298
SG+ Y + + G+ A+R +P ++ EI + +PNI+++L + +
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD- 90
Query: 299 KECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNL 357
E +++ME L L + E C +I + + + +E+LHS ++ H ++
Sbjct: 91 -ELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHSNQVIHRDI 142
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
NILL G+ K++ FG + P+ +S W APEV+
Sbjct: 143 KSDNILLGMDGS-------VKLTDFGFCA--QITPEQSKRSTMVGTPYWMAPEVV----- 188
Query: 418 TESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ Y K D++S G++ E++ G+ P+
Sbjct: 189 ----TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I G+E++H++ + + +L P+NILL G H +IS GL+ +F K P S
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHG-------HVRISDLGLAC--DFSKKKPHAS 350
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
TH ++ APEVL++ Y +D +S G + F++L G PF
Sbjct: 351 VGTHGYM--APEVLQK--------GVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I G+E++H++ + + +L P+NILL G H +IS GL+ +F K P S
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHG-------HVRISDLGLAC--DFSKKKPHAS 350
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
TH ++ APEVL++ Y +D +S G + F++L G PF
Sbjct: 351 VGTHGYM--APEVLQK--------GVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 124
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 167
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDLWSVGCIMGEMVCH 215
Query: 446 KVPF 449
K+ F
Sbjct: 216 KILF 219
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 272 VPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLP 331
+ E+S L L H NI+ E K L+ E + +DL Y+ + C ++
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTE--KSLTLVFEYLDKDLKQYLDD--CGN---IINMH 100
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
+ Q+ RG+ Y H +K+ H +L P N+L+ RG K++ FGL+ K+
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-------ELKLADFGLARAKSIP 153
Query: 392 PKSPSQSGTTHPFIWHA-PEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
K+ T +W+ P++L ++ YS + D++ G I +E+ TG+ F
Sbjct: 154 TKTYDNEVVT---LWYRPPDIL--------LGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 30/242 (12%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPF 328
+ ++ E+ L L HPN + + + E +L+ME ++ P + +
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYCLGSASDLLEVHKKPLQEVEI 156
Query: 329 SLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ L +G+ YLHS + H ++ NILL G K+ FG +S+
Sbjct: 157 AAVTHGAL-----QGLAYLHSHNMIHRDVKAGNILLSEPGL-------VKLGDFGSASI- 203
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+P+ P+ W APEV+ ++ +Y K DV+S G+ C E+ K P
Sbjct: 204 ----MAPANXFVGTPY-WMAPEVILAMDE------GQYDGKVDVWSLGITCIELAERKPP 252
Query: 449 FEDAHLQGDKMSRNIRAGERP-LFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
++ +I E P L H +Y N C P RP+ S + R++
Sbjct: 253 L--FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT-SEVLLKHRFV 309
Query: 508 KR 509
R
Sbjct: 310 LR 311
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 244 GSGSQYKEI-LWLGESFALRHFFGDIEP----LVPEISSLLSLSHPNIMHFLCGFTDEEK 298
SG+ Y + + G+ A+R +P ++ EI + +PNI+++L + +
Sbjct: 33 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD- 91
Query: 299 KECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNL 357
E +++ME L L + E C +I + + + +E+LHS ++ H ++
Sbjct: 92 -ELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHSNQVIHRDI 143
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
NILL G+ K++ FG + P+ +S W APEV+
Sbjct: 144 KSDNILLGMDGS-------VKLTDFGFCA--QITPEQSKRSXMVGTPYWMAPEVV----- 189
Query: 418 TESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ Y K D++S G++ E++ G+ P+
Sbjct: 190 ----TRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L L H N++ L FT E+ E +L+ LM DL + +K + + F
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 127
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ RG++Y+HS I H +L PSN+ + +I FGL+ +
Sbjct: 128 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED-------CELRILDFGLARQAD 174
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+L GK F
Sbjct: 175 -----EEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 135
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 136 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 178
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 179 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDLWSVGCIMGEMVCH 226
Query: 446 KVPF 449
K+ F
Sbjct: 227 KILF 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI+ L P I + + K ++IME + ++ P P
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTK--LWIIMEYLG---GGSALDLLKPG---PLEETYI 118
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGP 392
++ +I +G++YLHS++ H ++ +N+LL +G K++ FG++ + +
Sbjct: 119 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-------DVKLADFGVAGQLTDTQI 171
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
K GT PF W APEV+++ S Y K+D++S G+ E+ G+ P D
Sbjct: 172 KRNXFVGT--PF-WMAPEVIKQ---------SAYDFKADIWSLGITAIELAKGEPPNSDL 219
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR---ILRYIKR 509
H ++ I P K + C + DP RP+ + + I RY K+
Sbjct: 220 HPM--RVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK 277
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 244 GSGSQYKEI-LWLGESFALRHFFGDIEP----LVPEISSLLSLSHPNIMHFLCGFTDEEK 298
SG+ Y + + G+ A+R +P ++ EI + +PNI+++L + +
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD- 90
Query: 299 KECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNL 357
E +++ME L L + E C +I + + + +E+LHS ++ H ++
Sbjct: 91 -ELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHSNQVIHRDI 142
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
NILL G+ K++ FG + P+ +S W APEV+
Sbjct: 143 KSDNILLGMDGS-------VKLTDFGFCA--QITPEQSKRSXMVGTPYWMAPEVV----- 188
Query: 418 TESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ Y K D++S G++ E++ G+ P+
Sbjct: 189 ----TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 172
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 173 -----DEMAGFVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G ++ + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLTEYVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 196
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 197 -----DEMXGXVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECF----LIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT +E + F L+M M DL +K RI F
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF- 132
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ +G+ Y+H+ I H +L P N+ + KI FGL+ +
Sbjct: 133 ------LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED-------CELKILDFGLARQAD 179
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
G + APEV+ + +Y++ D++S G I E++TGK F
Sbjct: 180 -----SEMXGXVVTRWYRAPEVI--------LNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
Query: 450 E 450
+
Sbjct: 227 K 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I G+E++H++ + + +L P+NILL G H +IS GL+ +F K P S
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHG-------HVRISDLGLAC--DFSKKKPHAS 350
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
TH ++ APEVL++ Y +D +S G + F++L G PF
Sbjct: 351 VGTHGYM--APEVLQK--------GVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I G+E++H++ + + +L P+NILL G H +IS GL+ +F K P S
Sbjct: 299 EIILGLEHMHNRFVVYRDLKPANILLDEHG-------HVRISDLGLAC--DFSKKKPHAS 349
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
TH ++ APEVL++ Y +D +S G + F++L G PF
Sbjct: 350 VGTHGYM--APEVLQK--------GVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 244 GSGSQYKEI-LWLGESFALRHFFGDIEP----LVPEISSLLSLSHPNIMHFLCGFTDEEK 298
SG+ Y + + G+ A+R +P ++ EI + +PNI+++L + +
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD- 90
Query: 299 KECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNL 357
E +++ME L L + E C +I + + + +E+LHS ++ H ++
Sbjct: 91 -ELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHSNQVIHRDI 142
Query: 358 NPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ 417
NILL G+ K++ FG + P+ +S W APEV+
Sbjct: 143 KSDNILLGMDGS-------VKLTDFGFCA--QITPEQSKRSEMVGTPYWMAPEVV----- 188
Query: 418 TESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ Y K D++S G++ E++ G+ P+
Sbjct: 189 ----TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPN++ + E K + LI EL++ +L ++ E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILIGELVAGGELFDFLAE------KES 110
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + + QI G+ YLHS +I H +L P NI+L R KI FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP---RIKIIDFGLAHK 167
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
+FG + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 168 IDFGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 215
Query: 448 PF 449
PF
Sbjct: 216 PF 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +L I ++ +R+ +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QMELDHERMSY- 123
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 124 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-------LKILDFGLA---- 166
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 167 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 214
Query: 446 KVPF 449
K+ F
Sbjct: 215 KILF 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 152
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 153 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 199
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 200 -----DEMXGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKS 394
++ +I +G++YLHS+K H ++ +N+LL G K++ FG++ + + K
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-------EVKLADFGVAGQLTDTQIKR 161
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHL 454
GT PF W APEV+++ S Y K+D++S G+ E+ G+ P + H
Sbjct: 162 NXFVGT--PF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHSELHP 209
Query: 455 QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYIKRFIMMN 514
K+ I P + K + + C + +P+ RP+ + + +FI+ N
Sbjct: 210 M--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK-----HKFILRN 262
Query: 515 PHYNS 519
S
Sbjct: 263 AKKTS 267
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 132
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 133 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 179
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G + + APE++ NSK Y++ D++S G I E+L+
Sbjct: 180 --PDHDHTGFLXEXVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 229 RPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 34/188 (18%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H NI+ + T E+ K+ +++ +LM DL +K I +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-- 133
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+LL KI FGL+ V +
Sbjct: 134 -----FLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-------CDLKICDFGLARVAD- 180
Query: 391 GPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTG 445
+G + + APE++ NSK Y++ D++S G I E+L+
Sbjct: 181 --PDHDHTGFLXEXVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSN 229
Query: 446 KVPFEDAH 453
+ F H
Sbjct: 230 RPIFPGKH 237
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIK-EICCPRKRIPFSLPV 332
EI+ L L HPN++ F ++ +L+ + DL IK + P LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 333 AV--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ L+ QI G+ YLH+ + H +L P+NIL+ G KI+ G + + N
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG---RVKIADMGFARLFN- 183
Query: 391 GPKSP--SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
P P F + APE+L Y++ D+++ G I E+LT +
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELL--------LGARHYTKAIDIWAIGCIFAELLTSEPI 235
Query: 449 F 449
F
Sbjct: 236 F 236
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS-VKNFGPKS 394
++ +I +G++YLHS+K H ++ +N+LL G K++ FG++ + + K
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-------EVKLADFGVAGQLTDTQIKR 176
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHL 454
GT PF W APEV+++ S Y K+D++S G+ E+ G+ P + H
Sbjct: 177 NXFVGT--PF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHSELHP 224
Query: 455 QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR---ILRYIKR 509
K+ I P + K + + C + +P+ RP+ + + ILR K+
Sbjct: 225 M--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 280
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 128/308 (41%), Gaps = 54/308 (17%)
Query: 238 QVRRRLGSGS----QYKEILWLGESFALRHFFGDIE----PLVPEISSLLSLS-HPNIMH 288
+VRR L G + + G +AL+ + E ++ E+ + LS HPNI+
Sbjct: 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 289 FLCGFT------DEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIAR 342
F + D + E L+ EL L ++K++ R P S + + Q R
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM---ESRGPLSCDTVLKIFYQTCR 147
Query: 343 GMEYLHSKK--IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK------- 393
++++H +K I H +L N+LL +G K+ FG ++ + P
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGT-------IKLCDFGSATTISHYPDYSWSAQR 200
Query: 394 ----SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ T P ++ PE+++ SN EK D+++ G I + + + PF
Sbjct: 201 RALVEEEITRNTTP-MYRTPEIID------LYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
Query: 450 EDAHLQGDKMSRNIRAGERPLFPFHSPKYVT--NLTKRCWHADPNQRPSFSSICRILRYI 507
ED G K+ I G+ + P H +Y +L + +P +R S + + L+ I
Sbjct: 254 ED----GAKL--RIVNGKYSI-PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306
Query: 508 KRFIMMNP 515
+NP
Sbjct: 307 AAARNVNP 314
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 45/279 (16%)
Query: 235 EDYQVRRRLGSGSQYKEILWLGES-----FALRHFF-------GDIEPLVPEISSLLSLS 282
+D+++ R LG G ++ + E AL+ F G L EI L
Sbjct: 23 DDFEIGRPLGKG-KFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HPNI+ F D ++ +LI+E R +L +++ C F +M ++A
Sbjct: 82 HPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCT------FDEQRTATIMEELA 133
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+ Y H KK+ H ++ P N KI+ FG S V + + GT
Sbjct: 134 DALMYCHGKKVIHRDIKPEN-------LLLGLKGELKIADFGWS-VHAPSLRRKTMCGT- 184
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
+ PE++E ++EK D++ G++C+E+L G PFE A + R
Sbjct: 185 --LDYLPPEMIE---------GRMHNEKVDLWCIGVLCYELLVGNPPFESAS-HNETYRR 232
Query: 462 NIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
++ + FP P +L + +P++R + +
Sbjct: 233 IVKVDLK--FPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI LL LSHPNI+ F E E L++EL++ +L I E + +S
Sbjct: 98 EIGVLLRLSHPNIIKLKEIF--ETPTEISLVLELVTGGELFDRIVE------KGYYSERD 149
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A D + QI + YLH I H +L P N+L A+ KI+ FGLS +
Sbjct: 150 AADAVKQILEAVAYLHENGIVHRDLKPENLLY----ATPAPDAPLKIADFGLSKIVEHQV 205
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + APE+L Y + D++S G+I + +L G PF D
Sbjct: 206 LMKTVCGTPG---YCAPEILR---------GCAYGPEVDMWSVGIITYILLCGFEPFYDE 253
Query: 453 HLQGDK-MSRNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
+GD+ M R I E + F SP + +L ++ DP +R
Sbjct: 254 --RGDQFMFRRILNCE---YYFISPWWDEVSLNAKDLVRKLIVLDPKKR 297
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI +GL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDYGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 45/250 (18%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI + H N++ L GF+ + C + + + + L + + C P S +
Sbjct: 80 EIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMR 135
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ A G+ +LH H ++ +NILL AKIS FGL+ +
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEA-------FTAKISDFGLARASEKFAQ 188
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ S + APE L + + KSD+YSFG++ EI+TG +P D H
Sbjct: 189 TVMXSRIVGTTAYMAPEALR----------GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
Query: 454 LQ------------------GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRP 495
+ D + + + + S + + ++ +C H N+RP
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRP 292
Query: 496 SFSSICRILR 505
+ ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 274 EISSLLSLSHPNIM---HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSL 330
EI LL H N++ L T E ++ +++ +LM DL +K I +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-- 148
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
+ QI RG++Y+HS + H +L PSN+L+ KI FGL+ + +
Sbjct: 149 -----FLYQILRGLKYIHSANVLHRDLKPSNLLINTT-------CDLKICDFGLARIAD- 195
Query: 391 GPKSPSQSGTTHPFI---WHAPEVLEENEQTESASNSK-YSEKSDVYSFGMICFEILTGK 446
P+ T + APE++ NSK Y++ D++S G I E+L+ +
Sbjct: 196 -PEHDHTGFLTEXVATRWYRAPEIM---------LNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 447 VPFEDAH 453
F H
Sbjct: 246 PIFPGKH 252
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++ G
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMIKG 221
Query: 446 KVPF 449
V F
Sbjct: 222 GVLF 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAG 177
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ T + + APEV+ Y E D++S G I E++ K+ F
Sbjct: 178 TSFMMEPEVVTRY---YRAPEVI---------LGMGYKENVDIWSVGCIMGEMVCHKILF 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +L+MELM +L I ++ +R+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-------LKILDFGLA---- 173
Query: 390 FGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ S P++ + APEV+ Y E D++S G I E++
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVI---------LGMGYKENVDIWSVGCIMGEMVRH 221
Query: 446 KVPF 449
K+ F
Sbjct: 222 KILF 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + HPNI+ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 39/193 (20%)
Query: 278 LLSLSHPNIMHFL--CGF--TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
L + HPN++ + C TD E K L+ E + +DL +Y+ K P LP
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLD------KAPPPGLPAE 120
Query: 334 V--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
DLM Q RG+++LH+ I H +L P NIL+ G K++ FGL+ + ++
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-------VKLADFGLARIYSY- 172
Query: 392 PKSPSQSGTTHPFI---WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
Q T + + APEVL + S Y+ D++S G I E+ K P
Sbjct: 173 -----QMALTPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFAEMFRRK-P 217
Query: 449 FEDAHLQGDKMSR 461
+ + D++ +
Sbjct: 218 LFCGNSEADQLGK 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 33/190 (17%)
Query: 278 LLSLSHPNIMHFL--CGF--TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
L + HPN++ + C TD E K L+ E + +DL +Y+ K P LP
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLD------KAPPPGLPAE 112
Query: 334 V--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
DLM Q RG+++LH+ I H +L P NIL+ G K++ FGL+ + ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-------VKLADFGLARIYSY- 164
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
+ + + APEVL + S Y+ D++S G I E+ K P
Sbjct: 165 --QMALAPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFAEMFRRK-PLFC 212
Query: 452 AHLQGDKMSR 461
+ + D++ +
Sbjct: 213 GNSEADQLGK 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + ++H NI+ L FT EE ++ +++MELM +LC I ++ +R+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-QMELDHERMSY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ G+++LHS I H +L PSNI++K KI FGL+
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAG 177
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ T + + APEV+ Y E D++S G I E++ K+ F
Sbjct: 178 TSFMMEPEVVTRY---YRAPEVI---------LGMGYKENVDLWSVGCIMGEMVCHKILF 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 40/241 (16%)
Query: 274 EISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLP 331
EI LL HPNI+ + D K +++ ELM +L I R++ FS
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDD--GKYVYVVTELMKGGELLDKIL-----RQKF-FSER 116
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
A ++ I + +EYLH++ + H +L PSNIL + E +I FG F
Sbjct: 117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES---IRICDFG------FA 167
Query: 392 PKSPSQSGT------THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
+ +++G T F+ APEVLE Y D++S G++ + +LTG
Sbjct: 168 KQLRAENGLLMTPCYTANFV--APEVLERQ---------GYDAACDIWSLGVLLYTMLTG 216
Query: 446 KVPFEDA-HLQGDKMSRNIRAGERPLFPFH---SPKYVTNLTKRCWHADPNQRPSFSSIC 501
PF + +++ I +G+ L + +L + H DP+QR + + +
Sbjct: 217 YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVL 276
Query: 502 R 502
R
Sbjct: 277 R 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI+ L + HPNI+ + E +LIM+L+S +L I E +R
Sbjct: 66 EIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTER------D 117
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A L+ Q+ ++YLH I H +L P N+L ++ IS FGLS +++ G
Sbjct: 118 ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK----IMISDFGLSKMEDPGS 173
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + APEVL + YS+ D +S G+I + +L G PF D
Sbjct: 174 VLSTACGTPG---YVAPEVL---------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
+ K+ I E + F SP + + + DP +R
Sbjct: 222 N--DAKLFEQILKAE---YEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 158
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI FGL+ +
Sbjct: 159 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFGLARHTD 205
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y+ D++S G I E+LTG+ F
Sbjct: 206 -----DEMTGYVATRWYRAPEIM--------LNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 33/190 (17%)
Query: 278 LLSLSHPNIMHFL--CGF--TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
L + HPN++ + C TD E K L+ E + +DL +Y+ K P LP
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLD------KAPPPGLPAE 112
Query: 334 V--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
DLM Q RG+++LH+ I H +L P NIL+ G K++ FGL+ + ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-------VKLADFGLARIYSY- 164
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
+ + APEVL + S Y+ D++S G I E+ K P
Sbjct: 165 --QMALDPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFAEMFRRK-PLFC 212
Query: 452 AHLQGDKMSR 461
+ + D++ +
Sbjct: 213 GNSEADQLGK 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI+ L + HPNI+ + E +LIM+L+S +L I E +R
Sbjct: 66 EIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTER------D 117
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A L+ Q+ ++YLH I H +L P N+L ++ IS FGLS +++ G
Sbjct: 118 ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK----IMISDFGLSKMEDPGS 173
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + APEVL + YS+ D +S G+I + +L G PF D
Sbjct: 174 VLSTACGTPG---YVAPEVL---------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
+ K+ I E + F SP + + + DP +R
Sbjct: 222 N--DAKLFEQILKAE---YEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPV 332
EI+ L + HPNI+ + E +LIM+L+S +L I E +R
Sbjct: 66 EIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTER------D 117
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
A L+ Q+ ++YLH I H +L P N+L ++ IS FGLS +++ G
Sbjct: 118 ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSK----IMISDFGLSKMEDPGS 173
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ GT + APEVL + YS+ D +S G+I + +L G PF D
Sbjct: 174 VLSTACGTPG---YVAPEVL---------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 453 HLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
+ K+ I E + F SP + + + DP +R
Sbjct: 222 N--DAKLFEQILKAE---YEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E++ L + HPNI+ F E K + LI+EL+S +L ++ E +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + QI G+ YLHSK+I H +L P NI+L + K+ FG++
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHK 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEAGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 274 EISSLLSLSHPNIMHFLCGF--TDEEKKECFLIMEL-MSRDLCSYIKEICCPRKRIPFSL 330
E L L HPNI+ F + T + KK L+ EL S L +Y+K + +
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK------I 128
Query: 331 PVAVDLMLQIARGMEYLHSKK--IYHGNLNPSNILLK-PRGASTEGYLHAKISGFGLSSV 387
V QI +G+++LH++ I H +L NI + P G+ KI GL+++
Sbjct: 129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS-------VKIGDLGLATL 181
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
K + + GT + APE EE KY E DVY+FG E T +
Sbjct: 182 KR-ASFAKAVIGTPE---FXAPEXYEE----------KYDESVDVYAFGXCXLEXATSEY 227
Query: 448 PFEDAHLQGDKMSRNIRAGERPL-FPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
P+ + ++ R + +G +P F + V + + C + ++R S +
Sbjct: 228 PYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 45/250 (18%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI + H N++ L GF+ + C + + + + L + + C P S +
Sbjct: 80 EIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMR 135
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ A G+ +LH H ++ +NILL AKIS FGL+ +
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEA-------FTAKISDFGLARASEKFAQ 188
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + APE L + + KSD+YSFG++ EI+TG +P D H
Sbjct: 189 TVMXXRIVGTTAYMAPEALR----------GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
Query: 454 LQ------------------GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRP 495
+ D + + + + S + + ++ +C H N+RP
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRP 292
Query: 496 SFSSICRILR 505
+ ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E++ L + HPNI+ F E K + LI+EL+S +L ++ E +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 104
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + QI G+ YLHSK+I H +L P NI+L + K+ FG++
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHK 161
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 162 IEAGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 209
Query: 448 PF 449
PF
Sbjct: 210 PF 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 39/268 (14%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
++ L E+ L+HPNI+ E +K +L+ E S ++ Y+ +++
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK- 113
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
A QI ++Y H K I H +L N+LL + + KI+ FG S+
Sbjct: 114 -----EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL-------DADXNIKIADFGFSN 161
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTG 445
FG K + G + APE+ + KY + DV+S G+I + +++G
Sbjct: 162 EFTFGNKLDAFCGAPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSG 209
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILR 505
+PF+ +L+ + R +R R PF+ NL K+ +P++R + I +
Sbjct: 210 SLPFDGQNLK-ELRERVLRGKYR--IPFYXSTDCENLLKKFLILNPSKRGTLEQIXK--- 263
Query: 506 YIKRFIMMNPHYNSQPDPPM-PLVDYSD 532
R+ + H + + P + PL DY D
Sbjct: 264 --DRWXNVG-HEDDELKPYVEPLPDYKD 288
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 30/178 (16%)
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
N++H L FT + + EL+S +L IK+ K FSLP+ I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLYELIKK----NKFQGFSLPLVRKFAHSILQCL 213
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ LH +I H +L P NILLK +G S K+ FG S ++ + QS
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG-----IKVIDFGSSCYEHQRVYTXIQS-----R 263
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK--VPFEDAHLQGDKMS 460
+ APEV+ ++Y D++S G I E+LTG +P ED +GD+++
Sbjct: 264 FYRAPEVI---------LGARYGMPIDMWSLGCILAELLTGYPLLPGED---EGDQLA 309
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E++ L + HPNI+ F E K + LI+EL+S +L ++ E +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 125
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
+ A + QI G+ YLHSK+I H +L P NI+L + K+ FG++
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHK 182
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 183 IEAGNEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 230
Query: 448 PF 449
PF
Sbjct: 231 PF 232
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 49/276 (17%)
Query: 237 YQVRRRLGSGSQYKEILWLGES-----------FALRHFFGDIEPLVPEISSLLSLSHPN 285
Y R LG+G+ + E++ L E A + G + EI+ L + HPN
Sbjct: 20 YDFRDVLGTGA-FSEVI-LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 286 IMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
I+ + E +LIM+L+S +L I E +R A L+ Q+ +
Sbjct: 78 IVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD------ASRLIFQVLDAV 129
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+YLH I H +L P N+L ++ IS FGLS +++ G + GT
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSK----IMISDFGLSKMEDPGSVLSTACGTPG-- 183
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIR 464
+ APEVL + YS+ D +S G+I + +L G PF D + K+ I
Sbjct: 184 -YVAPEVL---------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN--DAKLFEQIL 231
Query: 465 AGERPLFPFHSPKY------VTNLTKRCWHADPNQR 494
E + F SP + + + DP +R
Sbjct: 232 KAE---YEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 300 ECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK-KIYHGNLN 358
+ F+ MELM C+ E R + P + + + I + + YL K + H ++
Sbjct: 98 DVFIAMELMG--TCA---EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152
Query: 359 PSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQT 418
PSNILL RG K+ FG+S + K+ +S ++ APE ++ + T
Sbjct: 153 PSNILLDERG-------QIKLCDFGISG-RLVDDKAKDRSAGCAAYM--APERIDPPDPT 202
Query: 419 ESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHS--P 476
+ Y ++DV+S G+ E+ TG+ P+++ + +++ ++ E PL P H
Sbjct: 203 KP----DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPLLPGHMGFS 257
Query: 477 KYVTNLTKRCWHADPNQRPSFSSICRILRYIKRF 510
+ K C D +RP ++ + +IKR+
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKLLE-HSFIKRY 290
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI GL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDAGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 30/178 (16%)
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
N++H L FT + + EL+S +L IK+ K FSLP+ I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLYELIKK----NKFQGFSLPLVRKFAHSILQCL 213
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ LH +I H +L P NILLK +G S K+ FG S ++ + QS
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG-----IKVIDFGSSCYEHQRVYTXIQS-----R 263
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK--VPFEDAHLQGDKMS 460
+ APEV+ ++Y D++S G I E+LTG +P ED +GD+++
Sbjct: 264 FYRAPEVI---------LGARYGMPIDMWSLGCILAELLTGYPLLPGED---EGDQLA 309
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 41/194 (21%)
Query: 278 LLSLSHPNIMHFL--CGF--TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
L + HPN++ + C TD E K L+ E + +DL +Y+ K P LP
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLD------KAPPPGLPAE 112
Query: 334 V--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
DLM Q RG+++LH+ I H +L P NIL+ G K++ FGL+ + ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-------VKLADFGLARIYSY- 164
Query: 392 PKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
P + + APEVL + S Y+ D++S G I E+ K
Sbjct: 165 ------QMALFPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFAEMFRRK- 208
Query: 448 PFEDAHLQGDKMSR 461
P + + D++ +
Sbjct: 209 PLFCGNSEADQLGK 222
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI F L+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDFYLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI GL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDGGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTD----EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT EE + +L+ LM DL + +K + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ QI RG++Y+HS I H +L PSN+ + KI GL+ +
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-------CELKILDRGLARHTD 176
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APE++ + Y++ D++S G I E+LTG+ F
Sbjct: 177 -----DEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 45/282 (15%)
Query: 237 YQVRRRLGSGSQYKEILW----LGESFALR-----HFFGDIEPLVPEISSLLSLSHPNIM 287
++ + LG+G+ + +L G+ FA++ G + EI+ L + H NI+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 288 HFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEY 346
+ E +L+M+L+S +L I E + ++ A L+ Q+ + Y
Sbjct: 84 ALEDIY--ESPNHLYLVMQLVSGGELFDRIVE------KGFYTEKDASTLIRQVLDAVYY 135
Query: 347 LHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIW 406
LH I H +L P N+L + ++ IS FGLS ++ G + GT +
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESK----IMISDFGLSKMEGKGDVMSTACGTPG---Y 188
Query: 407 HAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAG 466
APEVL + YS+ D +S G+I + +L G PF D + K+ I
Sbjct: 189 VAPEVL---------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN--DSKLFEQILKA 237
Query: 467 ERPLFPFHSPKY------VTNLTKRCWHADPNQRPSFSSICR 502
E + F SP + + + DPN+R + R
Sbjct: 238 E---YEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLK----PRGASTEGYLHAKISGFGLSSVKNF 390
DL+LQ+ RG+ Y+HS + H ++ PSNI + P AS EG S + + +
Sbjct: 115 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 174
Query: 391 GP----KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
G SP F+ A EVL+E N + K+D+++ + G
Sbjct: 175 GHVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALALTVVXA-AGA 223
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
P GD+ IR G P P + T L K H DP +RPS ++ +
Sbjct: 224 EPLPR---NGDQW-HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 275
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLK----PRGASTEGYLHAKISGFGLSSVKNF 390
DL+LQ+ RG+ Y+HS + H ++ PSNI + P AS EG S + + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 391 GP----KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
G SP F+ A EVL+E N + K+D+++ + G
Sbjct: 177 GHVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALALTVV-CAAGA 225
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
P GD+ IR G P P + T L K H DP +RPS ++ +
Sbjct: 226 EPLPR---NGDQW-HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 45/250 (18%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI + H N++ L GF+ + C + + + + L + + C P S +
Sbjct: 74 EIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMR 129
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ A G+ +LH H ++ +NILL AKIS FGL+ +
Sbjct: 130 CKIAQGAANGINFLHENHHIHRDIKSANILLDEA-------FTAKISDFGLARASEKFAQ 182
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ APE L + + KSD+YSFG++ EI+TG +P D H
Sbjct: 183 XVMXXRIVGTTAYMAPEALR----------GEITPKSDIYSFGVVLLEIITG-LPAVDEH 231
Query: 454 LQ------------------GDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRP 495
+ D + + + + S + + ++ +C H N+RP
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-----SVEAMYSVASQCLHEKKNKRP 286
Query: 496 SFSSICRILR 505
+ ++L+
Sbjct: 287 DIKKVQQLLQ 296
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 285 NIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGM 344
N++H L FT + + EL+S +L IK+ K FSLP+ I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLYELIKK----NKFQGFSLPLVRKFAHSILQCL 213
Query: 345 EYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF 404
+ LH +I H +L P NILLK +G S K+ FG S ++ QS
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG-----IKVIDFGSSCYEHQRVYXXIQS-----R 263
Query: 405 IWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK--VPFEDAHLQGDKMS 460
+ APEV+ ++Y D++S G I E+LTG +P ED +GD+++
Sbjct: 264 FYRAPEVI---------LGARYGMPIDMWSLGCILAELLTGYPLLPGED---EGDQLA 309
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLC 313
G SF+ E + E+ L +S HPNI+ T E FL+ +LM + +L
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL--KDTYETNTFFFLVFDLMKKGELF 112
Query: 314 SYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
Y+ E ++ S +M + + LH I H +L P NILL +
Sbjct: 113 DYLTE------KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL-------DD 159
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
++ K++ FG S + G K S GT + APE++E + + ++ Y ++ D++
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLRSVCGTPS---YLAPEIIE---CSMNDNHPGYGKEVDMW 213
Query: 434 SFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCW 487
S G+I + +L G PF H + M R I +G + F SP++ V +L R
Sbjct: 214 STGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGN---YQFGSPEWDDYSDTVKDLVSRFL 268
Query: 488 HADPNQR 494
P +R
Sbjct: 269 VVQPQKR 275
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 230 ILIKSEDYQVRRRLGSGS----QYKEILWLGESFALR----HFFGDIEPLVPEISSLLSL 281
++I ++ Y ++LG G E L G +AL+ H D E E
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF 83
Query: 282 SHPNIMHFL--CGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVD-LML 338
+HPNI+ + C K E +L++ R + EI + + F + L+L
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRG--TLWNEIERLKDKGNFLTEDQILWLLL 141
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPR--------GASTEGYLHAKISGFGLSSVKNF 390
I RG+E +H+K H +L P+NILL G+ + +H + S L +++++
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL-TLQDW 200
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + S + APE+ S+ E++DV+S G + + ++ G+ P++
Sbjct: 201 AAQRCTIS-------YRAPELF------SVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
Query: 451 DAHLQGDKMSRNIRAG-ERPLFPFHSPKYVTNLTKRCWHADPNQRP 495
+GD ++ ++ P P HS + L DP+QRP
Sbjct: 248 MVFQKGDSVALAVQNQLSIPQSPRHSSA-LWQLLNSMMTVDPHQRP 292
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLK----PRGASTEGYLHAKISGFGLSSVKNF 390
DL+LQ+ RG+ Y+HS + H ++ PSNI + P AS EG S + + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 391 GP----KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
G SP F+ A EVL+E N + K+D+++ + G
Sbjct: 177 GHVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALALTVV-CAAGA 225
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
P GD+ IR G P P + T L K H DP +RPS ++ +
Sbjct: 226 EPLPR---NGDQW-HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLK----PRGASTEGYLHAKISGFGLSSVKNF 390
DL+LQ+ RG+ Y+HS + H ++ PSNI + P AS EG S + + +
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 178
Query: 391 GP----KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
G SP F+ A EVL+E N + K+D+++ + G
Sbjct: 179 GHVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALALTVV-CAAGA 227
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICR 502
P GD+ IR G P P + T L K H DP +RPS ++ +
Sbjct: 228 EPLPR---NGDQW-HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L HPNI+ F D +K +L++E R KE+ +K F +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRG--ELYKEL---QKHGRFDEQRS 116
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
M ++A + Y H +K+ H ++ P N+L+ +G KI+ FG SV +
Sbjct: 117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-------LKIADFGW-SVHAPSLR 168
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
GT + PE++E + EK D++ G++C+E L G PF+
Sbjct: 169 RRXMCGT---LDYLPPEMIE---------GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L HPNI+ F D +K +L++E R KE+ +K F +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRG--ELYKEL---QKHGRFDEQRS 116
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
M ++A + Y H +K+ H ++ P N+L+ +G KI+ FG SV +
Sbjct: 117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-------LKIADFGW-SVHAPSLR 168
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
GT + PE++E + EK D++ G++C+E L G PF+
Sbjct: 169 RRXMCGT---LDYLPPEMIE---------GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L HPNI+ F D +K +L++E R KE+ +K F +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRG--ELYKEL---QKHGRFDEQRS 117
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
M ++A + Y H +K+ H ++ P N+L+ +G KI+ FG SV +
Sbjct: 118 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-------LKIADFGW-SVHAPSLR 169
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
GT + PE++E + EK D++ G++C+E L G PF+
Sbjct: 170 RRXMCGT---LDYLPPEMIE---------GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 237 YQVRRRLGSGS----QYKEILWLGESFALRHFF----GDIEPLVPEISSLLSLSHPNIMH 288
Y + LG+G+ G +FA + D E + EI ++ L HP +++
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 289 FLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
F D+ E +I E MS +++ ++ S AV+ M Q+ +G+ ++H
Sbjct: 113 LHDAFEDD--NEMVMIYEFMSG--GELFEKVADEHNKM--SEDEAVEYMRQVCKGLCHMH 166
Query: 349 SKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHA 408
H +L P NI+ +T+ K+ FGL++ + PK S TT + A
Sbjct: 167 ENNYVHLDLKPENIMF-----TTKRSNELKLIDFGLTA--HLDPKQ-SVKVTTGTAEFAA 218
Query: 409 PEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRA 465
PEV A +D++S G++ + +L+G PF D+ RN+++
Sbjct: 219 PEV---------AEGKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVKS 264
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
AV L ARG +LH+ + L P + L R + A+IS + VK F
Sbjct: 113 AVKFALDXARGXAFLHTLE----PLIPRHAL-NSRSVXIDEDXTARIS---XADVK-FSF 163
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+SP G + W APE L++ + + +D +SF ++ +E++T +VPF D
Sbjct: 164 QSP---GRXYAPAWVAPEALQKKPEDTN------RRSADXWSFAVLLWELVTREVPFAD- 213
Query: 453 HLQGDKMSRNIR-AGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
L ++ + G RP P +V+ L K C + DP +RP F I IL
Sbjct: 214 -LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 92/238 (38%), Gaps = 31/238 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI------ 326
E L L H +I+ F T E + ++ E M DL +++ K +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 127
Query: 327 ---PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFG 383
P L + + Q+A GM YL H +L N L+ +G L KI FG
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG------QG-LVVKIGDFG 180
Query: 384 LSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+S T P W PE S K++ +SDV+SFG++ +EI
Sbjct: 181 MSRDIYSTDYYRVGGRTMLPIRWMPPE---------SILYRKFTTESDVWSFGVVLWEIF 231
Query: 444 T-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
T GK P+ L + I G P P V + + CW +P QR S +
Sbjct: 232 TYGKQPW--YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLC 313
G SF+ E + E+ L +S HPNI+ T E FL+ +LM + +L
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL--KDTYETNTFFFLVFDLMKKGELF 99
Query: 314 SYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
Y+ E ++ S +M + + LH I H +L P NILL +
Sbjct: 100 DYLTE------KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL-------DD 146
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
++ K++ FG S + G K GT + APE++E + + ++ Y ++ D++
Sbjct: 147 DMNIKLTDFGFSCQLDPGEKLREVCGTPS---YLAPEIIE---CSMNDNHPGYGKEVDMW 200
Query: 434 SFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCW 487
S G+I + +L G PF H + M R I +G + F SP++ V +L R
Sbjct: 201 STGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGN---YQFGSPEWDDYSDTVKDLVSRFL 255
Query: 488 HADPNQR 494
P +R
Sbjct: 256 VVQPQKR 262
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 92/238 (38%), Gaps = 31/238 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI------ 326
E L L H +I+ F T E + ++ E M DL +++ K +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 121
Query: 327 ---PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFG 383
P L + + Q+A GM YL H +L N L+ +G L KI FG
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG------QG-LVVKIGDFG 174
Query: 384 LSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+S T P W PE S K++ +SDV+SFG++ +EI
Sbjct: 175 MSRDIYSTDYYRVGGRTMLPIRWMPPE---------SILYRKFTTESDVWSFGVVLWEIF 225
Query: 444 T-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
T GK P+ L + I G P P V + + CW +P QR S +
Sbjct: 226 TYGKQPW--YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 90 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 142
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 196 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 232
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 237 YQVRRRLGSGS----QYKEILWLGESFALRHFF----GDIEPLVPEISSLLSLSHPNIMH 288
Y + LG+G+ G +FA + D E + EI ++ L HP +++
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 289 FLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
F D+ E +I E MS +++ ++ S AV+ M Q+ +G+ ++H
Sbjct: 219 LHDAFEDD--NEMVMIYEFMSG--GELFEKVADEHNKM--SEDEAVEYMRQVCKGLCHMH 272
Query: 349 SKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHA 408
H +L P NI+ + ++ K+ FGL++ + PK S TT + A
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSN-----ELKLIDFGLTA--HLDPKQ-SVKVTTGTAEFAA 324
Query: 409 PEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRA 465
PEV A +D++S G++ + +L+G PF D+ RN+++
Sbjct: 325 PEV---------AEGKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVKS 370
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 233 KSEDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-L 281
+ ED++ + LG GS +L +A+ RH + + P V ++S L
Sbjct: 7 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 66
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP + F D+EK F + + +L YI++I F +I
Sbjct: 67 DHPFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIV 119
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 120 SALEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFV 172
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 173 GTAQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 233 KSEDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-L 281
+ ED++ + LG GS +L +A+ RH + + P V ++S L
Sbjct: 5 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 64
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP + F D+EK F + + +L YI++I F +I
Sbjct: 65 DHPFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIV 117
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 118 SALEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFV 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 171 GTAQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 233 KSEDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-L 281
+ ED++ + LG GS +L +A+ RH + + P V ++S L
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 67
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP + F D+EK F + + +L YI++I F +I
Sbjct: 68 DHPFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIV 120
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 121 SALEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFV 173
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 174 GTAQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 50/245 (20%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGESFALRH----------FFGDIEPLVPEISSLL-- 279
+K+EDY V + +G G+ GE +RH E + S+
Sbjct: 72 MKAEDYDVVKVIGRGA-------FGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWE 124
Query: 280 ------SLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPV 332
+ P ++ C F D+ K +++ME M DL + + P K F
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDD--KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF---- 178
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFG 391
++ ++ +HS + H ++ P N+LL G H K++ FG + G
Sbjct: 179 ---YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG-------HLKLADFGTCMKMDETG 228
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
+ T +I +PEVL+ + Y + D +S G+ FE+L G PF
Sbjct: 229 MVHCDTAVGTPDYI--SPEVLKS-----QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281
Query: 452 AHLQG 456
L G
Sbjct: 282 DSLVG 286
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 66/305 (21%)
Query: 274 EISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLP 331
EI LL HPNI+ + D K +L+ ELM +L I R++ FS
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKIL-----RQKF-FSER 121
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
A ++ I + +EYLHS+ + H +L PSNIL + E +I FG F
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL---RICDFG------FA 172
Query: 392 PKSPSQSGT------THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
+ +++G T F+ APEVL+ Y E D++S G++ + +L G
Sbjct: 173 KQLRAENGLLMTPCYTANFV--APEVLKRQ---------GYDEGCDIWSLGILLYTMLAG 221
Query: 446 KVPFEDAHLQG-DKMSRNIRAGERPLFPFHSPKYVT------NLTKRCWHADPNQRPSFS 498
PF + +++ I +G+ F + T +L + H DP+QR +
Sbjct: 222 YTPFANGPSDTPEEILTRIGSGK---FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
Query: 499 SIC------------------RILRYIKRFIMM--NPHYNSQPDPPMPLVDYSDIESRLL 538
+ + L+ +K + + +S+P P + ++ S + R +
Sbjct: 279 QVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKPIESSILAQRRV 338
Query: 539 RKFPS 543
RK PS
Sbjct: 339 RKLPS 343
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 233 KSEDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-L 281
+ ED++ + LG GS +L +A+ RH + + P V ++S L
Sbjct: 6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 65
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP + F D+EK F + + +L YI++I F +I
Sbjct: 66 DHPFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIV 118
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 119 SALEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFV 171
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 172 GTAQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 90 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 142
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 196 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 232
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 46/261 (17%)
Query: 234 SEDYQVRRRLGSG--SQYKEIL--WLGESFALRHFFG------DIEPLVPEISSLLSLSH 283
S++Y V+ LG G S + + G FA + D + L E L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ +E +L+ +L++ ++I R +S A + QI
Sbjct: 64 PNIVRLHDSIQEESFH--YLVFDLVTGG--ELFEDIVA---REFYSEADASHCIQQILES 116
Query: 344 MEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+ Y HS I H NL P N+LL K +GA+ K++ FGL+ N +GT
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAV------KLADFGLAIEVNDSEAWHGFAGTP 170
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQGDKM 459
+ +PEVL+++ YS+ D+++ G+I + +L G PF ED H ++
Sbjct: 171 G---YLSPEVLKKD---------PYSKPVDIWACGVILYILLVGYPPFWDEDQH----RL 214
Query: 460 SRNIRAGERPLFPFHSPKYVT 480
I+AG + + SP++ T
Sbjct: 215 YAQIKAGA---YDYPSPEWDT 232
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 46/261 (17%)
Query: 234 SEDYQVRRRLGSG--SQYKEIL--WLGESFALRHFFG------DIEPLVPEISSLLSLSH 283
S++Y V+ LG G S + + G FA + D + L E L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ +E +L+ +L++ ++I R +S A + QI
Sbjct: 65 PNIVRLHDSIQEESFH--YLVFDLVTGG--ELFEDIVA---REFYSEADASHCIQQILES 117
Query: 344 MEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+ Y HS I H NL P N+LL K +GA+ K++ FGL+ N +GT
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAV------KLADFGLAIEVNDSEAWHGFAGTP 171
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQGDKM 459
+ +PEVL+++ YS+ D+++ G+I + +L G PF ED H ++
Sbjct: 172 G---YLSPEVLKKD---------PYSKPVDIWACGVILYILLVGYPPFWDEDQH----RL 215
Query: 460 SRNIRAGERPLFPFHSPKYVT 480
I+AG + + SP++ T
Sbjct: 216 YAQIKAGA---YDYPSPEWDT 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + H N++ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 22/180 (12%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI H N++ L GF+ + C + + + L + + C P S
Sbjct: 71 EIKVXAKCQHENLVELL-GFSSDGDDLCLVYVYXPNGSL---LDRLSCLDGTPPLSWHXR 126
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ A G+ +LH H ++ +NILL AKIS FGL+ +
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLDEA-------FTAKISDFGLARASEKFAQ 179
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
S + APE L + + KSD+YSFG++ EI+TG +P D H
Sbjct: 180 XVXXSRIVGTTAYXAPEALR----------GEITPKSDIYSFGVVLLEIITG-LPAVDEH 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 93 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 145
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 199 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMSR-DLC 313
G SF+ E + E+ L +S HPNI+ T E FL+ +LM + +L
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL--KDTYETNTFFFLVFDLMKKGELF 112
Query: 314 SYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
Y+ E ++ S +M + + LH I H +L P NILL +
Sbjct: 113 DYLTE------KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL-------DD 159
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
++ K++ FG S + G K GT + APE++E + + ++ Y ++ D++
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPS---YLAPEIIE---CSMNDNHPGYGKEVDMW 213
Query: 434 SFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY------VTNLTKRCW 487
S G+I + +L G PF H + M R I +G + F SP++ V +L R
Sbjct: 214 STGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGN---YQFGSPEWDDYSDTVKDLVSRFL 268
Query: 488 HADPNQR 494
P +R
Sbjct: 269 VVQPQKR 275
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
D + L E L HPNI+ +E +L+ +L++ ++I R
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFH--YLVFDLVTGG--ELFEDIVA---RE 100
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGL 384
+S A + QI + Y HS I H NL P N+LL K +GA+ K++ FGL
Sbjct: 101 FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV------KLADFGL 154
Query: 385 SSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ N +GT + +PEVL+++ YS+ D+++ G+I + +L
Sbjct: 155 AIEVNDSEAWHGFAGTPG---YLSPEVLKKD---------PYSKPVDIWACGVILYILLV 202
Query: 445 GKVPF--EDAHLQGDKMSRNIRAGERPLFPFHSPKYVT 480
G PF ED H ++ I+AG + + SP++ T
Sbjct: 203 GYPPFWDEDQH----RLYAQIKAGA---YDYPSPEWDT 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 89 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 141
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 195 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 90/238 (37%), Gaps = 31/238 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI------ 326
E L L H +I+ F T E + ++ E M DL +++ K +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCT--EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 327 ---PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFG 383
P L + + Q+A GM YL H +L N L+ L KI FG
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG-------LVVKIGDFG 203
Query: 384 LSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+S T P W PE S K++ +SDV+SFG++ +EI
Sbjct: 204 MSRDIYSTDYYRVGGRTMLPIRWMPPE---------SILYRKFTTESDVWSFGVVLWEIF 254
Query: 444 T-GKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
T GK P+ L + I G P P V + + CW +P QR S +
Sbjct: 255 TYGKQPW--YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 274 EISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLP 331
EI LL HPNI+ + D K +L+ ELM +L I R++ FS
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKIL-----RQKF-FSER 121
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
A ++ I + +EYLHS+ + H +L PSNIL + E +I FG F
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL---RICDFG------FA 172
Query: 392 PKSPSQSGT------THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
+ +++G T F+ APEVL+ Y E D++S G++ + +L G
Sbjct: 173 KQLRAENGLLMTPCYTANFV--APEVLKRQ---------GYDEGCDIWSLGILLYTMLAG 221
Query: 446 KVPFEDAHLQG-DKMSRNIRAGERPLFPFH---SPKYVTNLTKRCWHADPNQR 494
PF + +++ I +G+ L + + +L + H DP+QR
Sbjct: 222 YTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQR 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + H N++ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 90 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 142
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 196 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTEKSAXKS---------SDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + H N++ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
++E + EI L S HPNI+ L F E ++++E + + + +R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCA---GGAVDAVMLELER- 130
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P + + Q + YLH KI H +L NIL G K++ FG+S+
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-------DIKLADFGVSA 183
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
KN S P+ W APEV+ E++ + Y K+DV+S G+ E+
Sbjct: 184 -KNTRTIQRRDSFIGTPY-WMAPEVV----MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 93 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 145
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 199 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 90 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 142
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 196 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + H N++ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLC-------SYIKEICCPRKRI 326
EI L L+HP I+ + F D E + ++++ELM +KE C ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATC---KL 118
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F Q+ ++YLH I H +L P N+LL +S E KI+ FG S
Sbjct: 119 YF---------YQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G S ++ P + APEVL S + Y+ D +S G+I F L+G
Sbjct: 166 I--LGETSLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
PF + H + I +G+ P + +L K+ DP R
Sbjct: 217 PPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 74 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 126
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 180 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 274 EISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLP 331
EI LL HPNI+ + D K +++ EL +L I R++ FS
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDD--GKYVYVVTELXKGGELLDKIL-----RQKF-FSER 116
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
A ++ I + +EYLH++ + H +L PSNIL + E +I FG F
Sbjct: 117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES---IRICDFG------FA 167
Query: 392 PKSPSQSGT------THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
+ +++G T F+ APEVLE Y D++S G++ + LTG
Sbjct: 168 KQLRAENGLLXTPCYTANFV--APEVLERQ---------GYDAACDIWSLGVLLYTXLTG 216
Query: 446 KVPFEDA-HLQGDKMSRNIRAGERPLFPFH---SPKYVTNLTKRCWHADPNQRPSFSSIC 501
PF + +++ I +G+ L + +L + H DP+QR + + +
Sbjct: 217 YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVL 276
Query: 502 R 502
R
Sbjct: 277 R 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLC-------SYIKEICCPRKRI 326
EI L L+HP I+ + F D E + ++++ELM +KE C ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATC---KL 118
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F Q+ ++YLH I H +L P N+LL +S E KI+ FG S
Sbjct: 119 YF---------YQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G S ++ P + APEVL S + Y+ D +S G+I F L+G
Sbjct: 166 I--LGETSLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
PF + H + I +G+ P + +L K+ DP R
Sbjct: 217 PPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLC-------SYIKEICCPRKRI 326
EI L L+HP I+ + F D E + ++++ELM +KE C ++
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATC---KL 117
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F Q+ ++YLH I H +L P N+LL +S E KI+ FG S
Sbjct: 118 YF---------YQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSK 164
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G S ++ P + APEVL S + Y+ D +S G+I F L+G
Sbjct: 165 I--LGETSLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGY 215
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
PF + H + I +G+ P + +L K+ DP R
Sbjct: 216 PPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 265
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLC-------SYIKEICCPRKRI 326
EI L L+HP I+ + F D E + ++++ELM +KE C ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATC---KL 118
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F Q+ ++YLH I H +L P N+LL +S E KI+ FG S
Sbjct: 119 YF---------YQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G S ++ P + APEVL S + Y+ D +S G+I F L+G
Sbjct: 166 I--LGETSLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
PF + H + I +G+ P + +L K+ DP R
Sbjct: 217 PPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 269 EPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIP 327
E + E+S L + H N++ + E + + LI+EL+S +L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
S A + QI G+ YLH+KKI H +L P NI+L + H K+ FGL+
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP---HIKLIDFGLAHE 168
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV 447
G + + GT + APE++ + ++D++S G+I + +L+G
Sbjct: 169 IEDGVEFKNIFGTPE---FVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 448 PF 449
PF
Sbjct: 217 PF 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L L+HP I+ + F D E + ++++ELM + + KR+ +
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG---GELFDKVVGNKRLKEA--TC 241
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
Q+ ++YLH I H +L P N+LL +S E KI+ FG S + G
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSKI--LGET 295
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
S ++ P + APEVL S + Y+ D +S G+I F L+G PF + H
Sbjct: 296 SLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-H 347
Query: 454 LQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
+ I +G+ P + +L K+ DP R
Sbjct: 348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 391
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
++E + EI L S HPNI+ L F E ++++E + + + +R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCA---GGAVDAVMLELER- 130
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P + + Q + YLH KI H +L NIL G K++ FG+S+
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-------DIKLADFGVSA 183
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
KN S P+ W APEV+ E++ + Y K+DV+S G+ E+
Sbjct: 184 -KNTRXIQRRDSFIGTPY-WMAPEVV----MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIP 327
++ L E+ + L+HPNI+ E +K +L+ME S + + R+
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVI--ETEKTLYLVMEYAS---GGEVFDYLVAHGRMK 112
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
A QI ++Y H K I H +L N+LL +G ++ KI+ FG S+
Sbjct: 113 EKEARAK--FRQIVSAVQYCHQKYIVHRDLKAENLLL-------DGDMNIKIADFGFSNE 163
Query: 388 KNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSE-KSDVYSFGMICFEILTGK 446
G K + G+ + APE+ + KY + DV+S G+I + +++G
Sbjct: 164 FTVGNKLDTFCGSPP---YAAPELFQ---------GKKYDGPEVDVWSLGVILYTLVSGS 211
Query: 447 VPFEDAHLQ 455
+PF+ +L+
Sbjct: 212 LPFDGQNLK 220
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 89 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 141
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 195 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L L+HP I+ + F D E + ++++ELM + + KR+ +
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG---GELFDKVVGNKRLKEA--TC 255
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
Q+ ++YLH I H +L P N+LL +S E KI+ FG S + G
Sbjct: 256 KLYFYQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSKI--LGET 309
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
S ++ P + APEVL S + Y+ D +S G+I F L+G PF + H
Sbjct: 310 SLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-H 361
Query: 454 LQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
+ I +G+ P + +L K+ DP R
Sbjct: 362 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 405
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 95 PFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 147
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 201 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 237
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + L YI++I F +I
Sbjct: 92 PFFVKLYFTFQDDEKL-YFGLSYAKNGCLLKYIRKIGS------FDETCTRFYTAEIVSA 144
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +SAS S SD+++ G I ++++ G PF
Sbjct: 198 AQYVSPELLTE----KSASKS-----SDLWALGCIIYQLVAGLPPF 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 46/261 (17%)
Query: 234 SEDYQVRRRLGSG--SQYKEIL--WLGESFALRHFFG------DIEPLVPEISSLLSLSH 283
S++Y V+ LG G S + + G FA + D + L E L H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
PNI+ +E +L+ +L++ ++I R +S A + QI
Sbjct: 88 PNIVRLHDSIQEESFH--YLVFDLVTGG--ELFEDIVA---REFYSEADASHCIQQILES 140
Query: 344 MEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+ Y HS I H NL P N+LL K +GA+ K++ FGL+ N +GT
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAV------KLADFGLAIEVNDSEAWHGFAGTP 194
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQGDKM 459
+ +PEVL+++ YS+ D+++ G+I + +L G PF ED H ++
Sbjct: 195 G---YLSPEVLKKD---------PYSKPVDIWACGVILYILLVGYPPFWDEDQH----RL 238
Query: 460 SRNIRAGERPLFPFHSPKYVT 480
I+AG + + SP++ T
Sbjct: 239 YAQIKAGA---YDYPSPEWDT 256
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
K C LI ME M +L S I+E R F+ A ++M I +++LHS I H +
Sbjct: 98 KRCLLIIMECMEGGELFSRIQE----RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 153
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ P N+L S E K++ FG + ++ Q+ P+ + APEVL
Sbjct: 154 VKPENLLY----TSKEKDAVLKLTDFGFAKETT---QNALQTPCYTPY-YVAPEVL---- 201
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQG--DKMSRNIRAGERPLFPFH 474
KY + D++S G+I + +L G PF Q M R IR G+ + F
Sbjct: 202 -----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YGFP 253
Query: 475 SPKY------VTNLTKRCWHADPNQRPSFS 498
+P++ L + DP +R + +
Sbjct: 254 NPEWSEVSEDAKQLIRLLLKTDPTERLTIT 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
K C LI ME M +L S I+E R F+ A ++M I +++LHS I H +
Sbjct: 79 KRCLLIIMECMEGGELFSRIQE----RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 134
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ P N+L S E K++ FG + ++ Q+ P+ + APEVL
Sbjct: 135 VKPENLLY----TSKEKDAVLKLTDFGFAKETT---QNALQTPCYTPY-YVAPEVL---- 182
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQG--DKMSRNIRAGERPLFPFH 474
KY + D++S G+I + +L G PF Q M R IR G+ + F
Sbjct: 183 -----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YGFP 234
Query: 475 SPKY------VTNLTKRCWHADPNQRPSFS 498
+P++ L + DP +R + +
Sbjct: 235 NPEWSEVSEDAKQLIRLLLKTDPTERLTIT 264
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFAL-----RHFFGDIE-PLVPEISSLLS-LSH 283
ED++ + LG GS +L +A+ RH + + P V ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 284 PNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARG 343
P + F D+EK F + + +L YI++I F +I
Sbjct: 97 PFFVKLYFCFQDDEKL-YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSA 149
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+EYLH K I H +L P NILL +H +I+ FG + V + K +
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNED-------MHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +PE+L E +S SD+++ G I ++++ G PF
Sbjct: 203 AQYVSPELLTEKSACKS---------SDLWALGCIIYQLVAGLPPF 239
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAK--ISGFGLSSVKNF--GPKS 394
+I +GM YLH+K I H +L N+ Y + K I+ FGL S+ +
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVF----------YDNGKVVITDFGLFSISGVLQAGRR 187
Query: 395 PSQSGTTHPFIWH-APEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ + ++ H APE++ + +S+ SDV++ G I +E+ + PF+
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ- 246
Query: 454 LQGDKMSRNIRAGERP-LFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRIL 504
+ + + G +P L K ++++ CW + +RP+F+ + +L
Sbjct: 247 -PAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLC-------SYIKEICCPRKRI 326
EI L L+HP I+ + F D E + ++++ELM +KE C ++
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATC---KL 124
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F Q+ ++YLH I H +L P N+LL +S E KI+ FG S
Sbjct: 125 YF---------YQMLLAVQYLHENGIIHRDLKPENVLL----SSQEEDCLIKITDFGHSK 171
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ G S ++ P + APEVL S + Y+ D +S G+I F L+G
Sbjct: 172 I--LGETSLMRTLCGTP-TYLAPEVL------VSVGTAGYNRAVDCWSLGVILFICLSGY 222
Query: 447 VPFEDAHLQGDKMSRNIRAGERPLFP---FHSPKYVTNLTKRCWHADPNQR 494
PF + H + I +G+ P + +L K+ DP R
Sbjct: 223 PPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
++E + EI L S HPNI+ L F E ++++E + + + +R
Sbjct: 50 ELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAG---GAVDAVMLELER- 103
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P + + Q + YLH KI H +L NIL G K++ FG+S+
Sbjct: 104 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-------DIKLADFGVSA 156
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
S P+ W APEV+ E++ + Y K+DV+S G+ E+
Sbjct: 157 KNTRTXIQRRDSFIGTPY-WMAPEVV----MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQ- 339
+HPNI+ + F + E +++ M+ K++ C + +A+ +LQ
Sbjct: 67 FNHPNIVPYRATFIAD--NELWVVTSFMAY---GSAKDLICTHFMDGMN-ELAIAYILQG 120
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
+ + ++Y+H H ++ S+IL+ G L + +S + P S
Sbjct: 121 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
P W +PEVL++N Q Y KSD+YS G+ E+ G VPF+D
Sbjct: 181 KVLP--WLSPEVLQQNLQ-------GYDAKSDIYSVGITACELANGHVPFKD 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQ- 339
+HPNI+ + F + E +++ M+ K++ C + +A+ +LQ
Sbjct: 83 FNHPNIVPYRATFIAD--NELWVVTSFMAY---GSAKDLICTHFMDGMN-ELAIAYILQG 136
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
+ + ++Y+H H ++ S+IL+ G L + +S + P S
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
P W +PEVL++N Q Y KSD+YS G+ E+ G VPF+D
Sbjct: 197 KVLP--WLSPEVLQQNLQ-------GYDAKSDIYSVGITACELANGHVPFKD 239
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+++ L GF DE + E LI + M +L ++ P + S +++ + A
Sbjct: 94 HPHLVS-LIGFCDE-RNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAA 149
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
RG+ YLH++ I H ++ NILL E ++ KI+ FG+S K ++ G T
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD------ENFV-PKITDFGIS-------KKGTELGQT 195
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
H + + E + +EKSDVYSFG++ FE+L +
Sbjct: 196 H--LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 26/122 (21%)
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL------- 384
V + + +QIA +E+LHSK + H +L PSNI K+ FGL
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-------VKVGDFGLVTAMDQD 217
Query: 385 ---SSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFE 441
+V P + G ++ +PE + N YS K D++S G+I FE
Sbjct: 218 EEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN---------NYSHKVDIFSLGLILFE 268
Query: 442 IL 443
+L
Sbjct: 269 LL 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 274 EISSLLSLSHPNIMHFL-------CGFTDE-----EKKECFLIMELMSRDLCSYIKEICC 321
EI + L H NI+ TD+ E +++ E M DL + +++
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-- 115
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
P A M Q+ RG++Y+HS + H +L P+N+ + +TE L KI
Sbjct: 116 -----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI-----NTED-LVLKIGD 164
Query: 382 FGLSSVKN--FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMIC 439
FGL+ + + + K G + + +P +L S + Y++ D+++ G I
Sbjct: 165 FGLARIMDPHYSHKGHLSEGLVTKW-YRSPRLL--------LSPNNYTKAIDMWAAGCIF 215
Query: 440 FEILTGKVPFEDAH 453
E+LTGK F AH
Sbjct: 216 AEMLTGKTLFAGAH 229
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 35/220 (15%)
Query: 282 SHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP ++ L F +E L L ++DL YI E + P + Q+
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE------KGPLGEGPSRCFFGQVV 149
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
+++ HS+ + H ++ NIL+ R AK+ FG ++ + P + GT
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGC------AKLIDFGSGALLHDEPYT-DFDGTR 202
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSR 461
++ PE + ++ ++ + V+S G++ ++++ G +PFE R
Sbjct: 203 ---VYSPPEWISRHQY--------HALPATVWSLGILLYDMVCGDIPFE----------R 241
Query: 462 NIRAGERPL-FPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
+ E L FP H L +RC P+ RPS I
Sbjct: 242 DQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEI 281
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 228 SRILIKSEDYQVRRRLGSGSQYKEIL----WLGESFALRHFF-------GDIEPLVPEIS 276
+R + D+ + LG G+ K IL G +A++ ++ V E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 277 SLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDL 336
L + HP + F ++ CF++ +L ++ R+R+ F+ A
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRL-CFVMEYANGGELFFHLS-----RERV-FTEERARFY 113
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGIS 160
Query: 397 QSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 161 DGATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 85 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 141 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTEPCYTPYYVAPEVL- 189
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 190 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 238
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI 326
++E + EI L S HPNI+ L F E ++++E + + + +R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCA---GGAVDAVMLELER- 130
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
P + + Q + YLH KI H +L NIL G K++ FG+S+
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-------DIKLADFGVSA 183
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
KN P+ W APEV+ E++ + Y K+DV+S G+ E+
Sbjct: 184 -KNTRXIQRRDXFIGTPY-WMAPEVV----MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 39/186 (20%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFL----------IMELMSRDLCSYI 316
++E + EI L + HP I+ L + + K + IM + R L
Sbjct: 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 317 KEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLH 376
++ C Q+ + +LHSK+I H +L N+L+ G
Sbjct: 119 IQVVCR----------------QMLEALNFLHSKRIIHRDLKAGNVLMTLEG-------D 155
Query: 377 AKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFG 436
+++ FG+S+ KN S P+ W APEV+ E+ ++ Y K+D++S G
Sbjct: 156 IRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAPEVV----MCETMKDTPYDYKADIWSLG 209
Query: 437 MICFEI 442
+ E+
Sbjct: 210 ITLIEM 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 131 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 187 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 235
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 236 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 284
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 317
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 39/186 (20%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFL----------IMELMSRDLCSYI 316
++E + EI L + HP I+ L + + K + IM + R L
Sbjct: 51 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 110
Query: 317 KEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLH 376
++ C Q+ + +LHSK+I H +L N+L+ G
Sbjct: 111 IQVVCR----------------QMLEALNFLHSKRIIHRDLKAGNVLMTLEG-------D 147
Query: 377 AKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFG 436
+++ FG+S+ KN S P+ W APEV+ E+ ++ Y K+D++S G
Sbjct: 148 IRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAPEVV----MCETMKDTPYDYKADIWSLG 201
Query: 437 MICFEI 442
+ E+
Sbjct: 202 ITLIEM 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
AV +I G+E LH ++I + +L P NILL G H +IS GL+ P
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-------HIRISDLGLAV---HVP 337
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + G + APEV++ N +Y+ D ++ G + +E++ G+ PF+
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVK---------NERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 143 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 191
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 192 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 240
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 273
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME + +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 85 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 141 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 189
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 190 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 238
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 271
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 143 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 191
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 192 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 240
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 273
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME + +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 92 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 148 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 196
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 197 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 245
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 246 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 278
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME + +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 86 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 142 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 190
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 191 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 239
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 240 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 272
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 159
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICC 321
++F D++ EI + SL HPNI+ F E+ + +L+MEL + + +
Sbjct: 44 KYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGG--ELFERVV- 98
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
KR+ F A +M + + Y H + H +L P N L + K+
Sbjct: 99 -HKRV-FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLID 152
Query: 382 FGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFE 441
FGL++ F P ++ P+ + +P+VLE Y + D +S G++ +
Sbjct: 153 FGLAA--RFKPGKMMRTKVGTPY-YVSPQVLE----------GLYGPECDEWSAGVMMYV 199
Query: 442 ILTGKVPF 449
+L G PF
Sbjct: 200 LLCGYPPF 207
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 91 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 147 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 195
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 196 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 244
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 245 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 277
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 137 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 193 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 241
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 242 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 290
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 291 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 323
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 164
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 93 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 149 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 197
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 198 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 246
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 247 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 279
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
AV +I G+E LH ++I + +L P NILL G H +IS GL+ P
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-------HIRISDLGLAV---HVP 337
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + G + APEV++ N +Y+ D ++ G + +E++ G+ PF+
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVK---------NERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 21/125 (16%)
Query: 340 IARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPSQS 398
+ + + YLH++ + H ++ +ILL G K+S FG + + PK
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDG-------RVKLSDFGFCAQISKDVPKRKXLV 202
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQGD 457
GT + W APEV+ S S Y+ + D++S G++ E++ G+ P F D+ +Q
Sbjct: 203 GTPY---WMAPEVI---------SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250
Query: 458 KMSRN 462
K R+
Sbjct: 251 KRLRD 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 51/270 (18%)
Query: 243 LGSGSQYKEILWL-----GESFALRHF-----FGDIEPLVPEISSLLSLSHPNIMHFLCG 292
LGSG+ + E+ + G+ FAL+ F D L EI+ L + H NI+
Sbjct: 17 LGSGA-FSEVFLVKQRLTGKLFALKCIKKSPAFRD-SSLENEIAVLKKIKHENIVTLEDI 74
Query: 293 FTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKK 351
+ E +L+M+L+S +L I E R ++ A ++ Q+ ++YLH
Sbjct: 75 Y--ESTTHYYLVMQLVSGGELFDRILE------RGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 352 IYHGNLNPSNIL-LKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPE 410
I H +L P N+L L P S I+ FGLS ++ G S + GT + APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSK-----IMITDFGLSKMEQNGIMS-TACGTPG---YVAPE 177
Query: 411 VLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPL 470
VL + YS+ D +S G+I + +L G PF + K+ I+ G
Sbjct: 178 VL---------AQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEG---Y 223
Query: 471 FPFHSPKY------VTNLTKRCWHADPNQR 494
+ F SP + + DPN+R
Sbjct: 224 YEFESPFWDDISESAKDFICHLLEKDPNER 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 159
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 262 RHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICC 321
++F D++ EI + SL HPNI+ F E+ + +L+MEL + + +
Sbjct: 61 KYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGG--ELFERVV- 115
Query: 322 PRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISG 381
KR+ F A +M + + Y H + H +L P N L + K+
Sbjct: 116 -HKRV-FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLID 169
Query: 382 FGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFE 441
FGL++ F P ++ P+ + +P+VLE Y + D +S G++ +
Sbjct: 170 FGLAA--RFKPGKMMRTKVGTPY-YVSPQVLE----------GLYGPECDEWSAGVMMYV 216
Query: 442 ILTGKVPF 449
+L G PF
Sbjct: 217 LLCGYPPF 224
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 159
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 299 KECFLI-MELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME + +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 101 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 156
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 157 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 205
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLF 471
KY + D++S G+I + +L G PF H M IR G+ +
Sbjct: 206 --------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 254
Query: 472 PFHSPKY------VTNLTKRCWHADPNQRPSFS 498
F +P++ V L + +P QR + +
Sbjct: 255 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 287
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 159
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I +EYLHS+ + + ++ N++L G H KI+ FGL + S
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-------HIKITDFGLCK------EGISDG 159
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
T F + APEVLE+N+ Y D + G++ +E++ G++PF
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 43/277 (15%)
Query: 237 YQVRRRLGSGSQYKEIL----WLGESFALR-----HFFGDIEPLVPEISSLLSLSHPNIM 287
Y++ +G+G K L GE A++ D+ + EI +L +L H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 288 HFLCGFTDEEKKECFLIMELM-SRDLCSYI---KEICCPRKRIPFSLPVAVDLMLQIARG 343
E + F+++E +L YI + R+ F QI
Sbjct: 72 QLY--HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---------QIVSA 120
Query: 344 MEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHP 403
+ Y+HS+ H +L P N+L + Y K+ FGL + K G K
Sbjct: 121 VAYVHSQGYAHRDLKPENLLF-------DEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGS 172
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNI 463
+ APE+++ S ++DV+S G++ + ++ G +PF+D ++ + + I
Sbjct: 173 LAYAAPELIQ--------GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA--LYKKI 222
Query: 464 RAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSI 500
G+ + + SP + L ++ DP +R S ++
Sbjct: 223 MRGKYDVPKWLSPSSIL-LLQQMLQVDPKKRISMKNL 258
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 261 LRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTD-----------EEKKECFLIMELM- 308
+RH + ++ E+ L SL+H ++ + + + ++K F+ ME
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 309 SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRG 368
+R L I ++R + L QI + Y+HS+ I H +L P NI +
Sbjct: 99 NRTLYDLIHSENLNQQRDEYW-----RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR 153
Query: 369 ASTEGYLHAKISGFGLS------------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ KI FGL+ +N S + + ++ A EVL+
Sbjct: 154 -------NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD--- 203
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD--KMSRNIRAGERPLFPFH 474
Y+EK D+YS G+I FE++ PF + + K R++ P F +
Sbjct: 204 -----GTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 475 SPKYVTNLTKRCWHADPNQRPSFSSIC 501
K + + DPN+RP ++
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 227 PSRILIK-SEDYQVRRRLGSGSQYKEILW-----LGESFALRHFFGDIEPLVP-----EI 275
P RI+ S D+Q++ LG G+ Y + GE A++ +PL EI
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGA-YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 276 SSLLSLSHPNIMH-FLCGFTD--EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPV 332
L H NI+ F D E E ++I ELM DL I I +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL------SS 386
+ Q R ++ LH + H +L PSN+L+ K+ FGL S+
Sbjct: 117 ---FIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-------SNCDLKVCDFGLARIIDESA 166
Query: 387 VKNFGPKSPSQSGTTHPFI---WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
N P QSG T + APEV+ +++KYS DV+S G I E+
Sbjct: 167 ADNSEPTG-QQSGMTEXVATRWYRAPEVM--------LTSAKYSRAMDVWSCGCILAELF 217
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 96/243 (39%), Gaps = 52/243 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L +ME S + E C R
Sbjct: 65 EIINHRSLRHPNIVRF---------KEVILTPTHLAIVMEYAS---GGELFERICNAGR- 111
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y H+ ++ H +L N LL A KI+ FG S
Sbjct: 112 -FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAP-----RLKIADFGYSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ S GT + APEVL + E Y K +DV+S G+ + +L G
Sbjct: 166 ASVLHSQPKSAVGTP---AYIAPEVLLKKE---------YDGKVADVWSCGVTLYVMLVG 213
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLF--PFHSPKYV------TNLTKRCWHADPNQRPSF 497
PFED + +N R + + P YV +L R + ADP +R S
Sbjct: 214 AYPFEDP-----EEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 498 SSI 500
I
Sbjct: 269 PEI 271
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EIS + L HP +++ F E+K E LI+E +S I ++ S
Sbjct: 98 EISIMNQLHHPKLINLHDAF--EDKYEMVLILEFLSG--GELFDRIAAEDYKM--SEAEV 151
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
++ M Q G++++H I H ++ P NI+ + + AS+ KI FGL++ N
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-----VKIIDFGLATKLNPDEI 206
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ T + APE+++ +D+++ G++ + +L+G PF
Sbjct: 207 VKVTTATAE---FAAPEIVD---------REPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 53/221 (23%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM---------------SRD 311
D+E + E+ + L HPNI + DE+ L+MEL S
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQY--ICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 312 LCS--YIKEICCP----------------RKRIPFSL--PVAVDLMLQIARGMEYLHSKK 351
C+ +K CP R+ + F + ++M QI + YLH++
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 352 IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS---VKNFGPKSPSQSGTTHPFIWHA 408
I H ++ P N L ST K+ FGLS N G + P+ + A
Sbjct: 189 ICHRDIKPENFLF-----STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY-FVA 242
Query: 409 PEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
PEVL + +N Y K D +S G++ +L G VPF
Sbjct: 243 PEVL-------NTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 155
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 156 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 324 KRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGF 382
KR F+ A ++ +A +++LH+K I H +L P NIL + P S KI F
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP-----VKICDF 158
Query: 383 GL-SSVKNFGPKSP-------SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
GL S +K G SP + G+ + APEV+E S S Y ++ D++S
Sbjct: 159 GLGSGIKLNGDCSPISTPELLTPCGSAE---YMAPEVVE----AFSEEASIYDKRCDLWS 211
Query: 435 FGMICFEILTGKVPF 449
G+I + +L+G PF
Sbjct: 212 LGVILYILLSGYPPF 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP+++ L GF DE + E LI + M +L ++ P + S +++ + A
Sbjct: 94 HPHLVS-LIGFCDE-RNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAA 149
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTT 401
RG+ YLH++ I H ++ NILL E ++ KI+ FG+S ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD------ENFV-PKITDFGISKKGTELDQTHLXXVVK 202
Query: 402 HPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
+ PE + TE KSDVYSFG++ FE+L +
Sbjct: 203 GTLGYIDPEYFIKGRLTE---------KSDVYSFGVVLFEVLCAR 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSP--SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ ++ T P++ APE+L+ E ++E DV+S G++ +L G++P
Sbjct: 158 NNRERLLNKMXGTLPYV--APELLKRREF--------HAEPVDVWSCGIVLTAMLAGELP 207
Query: 449 FE 450
++
Sbjct: 208 WD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 24/202 (11%)
Query: 300 ECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK-KIYHGNLN 358
+ ++ MELM L + K++ + IP + + + I + +E+LHSK + H ++
Sbjct: 80 DVWICMELMDTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKLSVIHRDVK 137
Query: 359 PSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQT 418
PSN+L+ G K+ FG+S +G P++ APE +
Sbjct: 138 PSNVLINALG-------QVKMCDFGISGYLVDDVAKDIDAGC-KPYM--APERI-----N 182
Query: 419 ESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY 478
+ YS KSD++S G+ E+ + P++ G + + E P + K+
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFPYDS---WGTPFQQLKQVVEEPSPQLPADKF 239
Query: 479 ---VTNLTKRCWHADPNQRPSF 497
+ T +C + +RP++
Sbjct: 240 SAEFVDFTSQCLKKNSKERPTY 261
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPS 360
+ +ME ++ DL +I+++ F P AV +IA G+ +L SK I + +L
Sbjct: 97 YFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLD 150
Query: 361 NILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTES 420
N++L G H KI+ FG+ + + T +I APE++
Sbjct: 151 NVMLDSEG-------HIKIADFGMCKENIWDGVTTKXFCGTPDYI--APEII-------- 193
Query: 421 ASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ Y + D ++FG++ +E+L G+ PFE
Sbjct: 194 -AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 227 PSRILIK-SEDYQVRRRLGSGSQYKEILW-----LGESFALRHFFGDIEPLVP-----EI 275
P RI+ S D+Q++ LG G+ Y + GE A++ +PL EI
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGA-YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 276 SSLLSLSHPNIMH-FLCGFTD--EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPV 332
L H NI+ F D E E ++I ELM DL I I +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL------SS 386
+ Q R ++ LH + H +L PSN+L+ K+ FGL S+
Sbjct: 117 ---FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN-------CDLKVCDFGLARIIDESA 166
Query: 387 VKNFGPKSPSQSGTTHPFI---WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
N P QSG T + APEV+ +++KYS DV+S G I E+
Sbjct: 167 ADNSEPTG-QQSGMTEYVATRWYRAPEVM--------LTSAKYSRAMDVWSCGCILAELF 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 296 EEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYH 354
E K + L+M +M+ D+ +I + F P A+ QI G+E+LH + I +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 355 GNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLE 413
+L P N+LL G + +IS GL+ +K K+ +GT + APE+L
Sbjct: 313 RDLKPENVLLDDDG-------NVRISDLGLAVELKAGQTKTKGYAGTPG---FMAPELLL 362
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
E Y D ++ G+ +E++ + PF
Sbjct: 363 GEE---------YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 296 EEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYH 354
E K + L+M +M+ D+ +I + F P A+ QI G+E+LH + I +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 355 GNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLE 413
+L P N+LL G + +IS GL+ +K K+ +GT + APE+L
Sbjct: 313 RDLKPENVLLDDDG-------NVRISDLGLAVELKAGQTKTKGYAGTPG---FMAPELLL 362
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
E Y D ++ G+ +E++ + PF
Sbjct: 363 GEE---------YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 296 EEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYH 354
E K + L+M +M+ D+ +I + F P A+ QI G+E+LH + I +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 355 GNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLE 413
+L P N+LL G + +IS GL+ +K K+ +GT + APE+L
Sbjct: 313 RDLKPENVLLDDDG-------NVRISDLGLAVELKAGQTKTKGYAGTPG---FMAPELLL 362
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
E Y D ++ G+ +E++ + PF
Sbjct: 363 GEE---------YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 296 EEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYH 354
E K + L+M +M+ D+ +I + F P A+ QI G+E+LH + I +
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 355 GNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQSGTTHPFIWHAPEVLE 413
+L P N+LL G + +IS GL+ +K K+ +GT + APE+L
Sbjct: 313 RDLKPENVLLDDDG-------NVRISDLGLAVELKAGQTKTKGYAGTPG---FMAPELLL 362
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
E Y D ++ G+ +E++ + PF
Sbjct: 363 GEE---------YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPS 360
+ +ME ++ DL +I+++ F P AV +IA G+ +L SK I + +L
Sbjct: 418 YFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLD 471
Query: 361 NILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTES 420
N++L G H KI+ FG+ + + T +I APE++
Sbjct: 472 NVMLDSEG-------HIKIADFGMCKENIWDGVTTKXFCGTPDYI--APEII-------- 514
Query: 421 ASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ Y + D ++FG++ +E+L G+ PFE
Sbjct: 515 -AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I RG+ +LH K+ H ++ N+LL K+ FG+S+ +
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENA-------EVKLVDFGVSA------QLDRTV 183
Query: 399 GTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
G + FI W APEV+ +E ++ Y KSD++S G+ E+ G P D H
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDAT----YDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 157
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 331 PVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF 390
P A Q+ G+ YLH I H ++ P N+LL R + KIS FGL++V +
Sbjct: 104 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-------NLKISDFGLATVFRY 156
Query: 391 GPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ + + APE+L+ E ++E DV+S G++ +L G++P++
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 43/231 (18%)
Query: 235 EDYQVRRRLGSGSQYKEILW----LGESFALRHF-------FGDIEPLVPEISSL-LSLS 282
++++ R LG GS K +L G+ +A++ D+E + E L L+ +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 283 HPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIA 341
HP + C F ++ F +ME ++ DL +I+ K F A +I
Sbjct: 83 HPFLTQLFCCFQTPDR--LFFVMEFVNGGDLMFHIQ------KSRRFDEARARFYAAEII 134
Query: 342 RGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL--SSVKNFGPKSPSQSG 399
+ +LH K I + +L N+LL G H K++ FG+ + N G + + G
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEG-------HCKLADFGMCKEGICN-GVTTATFCG 186
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
T + APE+L+E Y D ++ G++ +E+L G PFE
Sbjct: 187 TPD---YIAPEILQE---------MLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 24/202 (11%)
Query: 300 ECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK-KIYHGNLN 358
+ ++ MELM L + K++ + IP + + + I + +E+LHSK + H ++
Sbjct: 124 DVWICMELMDTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKLSVIHRDVK 181
Query: 359 PSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQT 418
PSN+L+ G K+ FG+S +G P++ APE +
Sbjct: 182 PSNVLINALG-------QVKMCDFGISGYLVDSVAKTIDAGC-KPYM--APERI-----N 226
Query: 419 ESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY 478
+ YS KSD++S G+ E+ + P++ G + + E P + K+
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDS---WGTPFQQLKQVVEEPSPQLPADKF 283
Query: 479 ---VTNLTKRCWHADPNQRPSF 497
+ T +C + +RP++
Sbjct: 284 SAEFVDFTSQCLKKNSKERPTY 305
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 46/243 (18%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGESFALRH----------FFGDIEPLVPEISSLLSL 281
+K+EDY+V + +G G+ GE +RH E ++ S
Sbjct: 66 MKAEDYEVVKVIGRGA-------FGEVQLVRHKSTRKVYAMKLLSKFE-MIKRSDSAFFW 117
Query: 282 SHPNIMHFLCG-------FTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVA 333
+IM F + ++ + +++ME M DL + + P K F
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF----- 172
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
++ ++ +HS H ++ P N+LL G H K++ FG N
Sbjct: 173 --YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------HLKLADFGTCMKMNKEGM 223
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ P + +PEVL+ + Y + D +S G+ +E+L G PF
Sbjct: 224 VRCDTAVGTP-DYISPEVLK-----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
Query: 454 LQG 456
L G
Sbjct: 278 LVG 280
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 46/243 (18%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGESFALRH----------FFGDIEPLVPEISSLLSL 281
+K+EDY+V + +G G+ GE +RH E ++ S
Sbjct: 71 MKAEDYEVVKVIGRGA-------FGEVQLVRHKSTRKVYAMKLLSKFE-MIKRSDSAFFW 122
Query: 282 SHPNIMHFLCG-------FTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVA 333
+IM F + ++ + +++ME M DL + + P K F
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-- 180
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
++ ++ +HS H ++ P N+LL G H K++ FG N
Sbjct: 181 -----EVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------HLKLADFGTCMKMNKEGM 228
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
+ P + +PEVL+ + Y + D +S G+ +E+L G PF
Sbjct: 229 VRCDTAVGTP-DYISPEVLK-----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
Query: 454 LQG 456
L G
Sbjct: 283 LVG 285
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 60/254 (23%)
Query: 274 EISSLLSLSHPNIMHFL--CGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLP 331
EI L L H N+++ L C ++KK +L+ E + + ++ P L
Sbjct: 74 EIKLLKQLRHENLVNLLEVC----KKKKRWYLVFEFVDHTILDDLE-------LFPNGLD 122
Query: 332 VAV--DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
V + QI G+ + HS I H ++ P NIL+ G K+ FG + +
Sbjct: 123 YQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV-------VKLCDFGFA--RT 173
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ APE+L + KY + DV++ G + E+ G+ F
Sbjct: 174 LAAPGEVYDDEVATRWYRAPELL--------VGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
Query: 450 -EDAHLQ---------GDKMSRN--------IRAG-------ERPLFPFHSPK---YVTN 481
D+ + G+ + R+ + AG ER PK V +
Sbjct: 226 PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVID 285
Query: 482 LTKRCWHADPNQRP 495
L K+C H DP++RP
Sbjct: 286 LAKKCLHIDPDKRP 299
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKR 325
D E + EIS + L H N++ F E K + L+ME + +L I +
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAF--ESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
+ L M QI G+ ++H I H +L P NIL R A KI FGL+
Sbjct: 187 LDTIL-----FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK-----QIKIIDFGLA 236
Query: 386 SVKNFGPKSPSQSGTTHP-FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ + P+ + P F+ APEV+ + S +D++S G+I + +L+
Sbjct: 237 --RRYKPREKLKVNFGTPEFL--APEVVNYD---------FVSFPTDMWSVGVIAYMLLS 283
Query: 445 GKVPF 449
G PF
Sbjct: 284 GLSPF 288
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECF----LIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT F L+M M DL I + ++I +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQK-IMGLKFSEEKIQY- 130
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ +G++Y+HS + H +L P N+ + KI FGL+ +
Sbjct: 131 ------LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED-------CELKILDFGLARHAD 177
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APEV+ S Y++ D++S G I E+LTGK F
Sbjct: 178 -----AEMTGYVVTRWYRAPEVI--------LSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
Query: 450 E 450
+
Sbjct: 225 K 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 48/244 (19%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGESFALRH----------FFGDIEPLVPEISSLL-- 279
+K+EDY+V + +G G+ GE +RH E + S+
Sbjct: 71 MKAEDYEVVKVIGRGA-------FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 280 ------SLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPV 332
+ P ++ F D+ + +++ME M DL + + P K F
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDD--RYLYMVMEYMPGGDLVNLMSNYDVPEKWARF---- 177
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGP 392
++ ++ +HS H ++ P N+LL G H K++ FG N
Sbjct: 178 ---YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------HLKLADFGTCMKMNKEG 227
Query: 393 KSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDA 452
+ P + +PEVL+ + Y + D +S G+ +E+L G PF
Sbjct: 228 MVRCDTAVGTP-DYISPEVLK-----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 453 HLQG 456
L G
Sbjct: 282 SLVG 285
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 102/267 (38%), Gaps = 49/267 (18%)
Query: 261 LRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEE---------KKECFLIMELM--- 308
+RH + ++ E+ L SL+H ++ + + + KK+ L ++
Sbjct: 39 IRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCE 98
Query: 309 SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRG 368
+R L I ++R + L QI + Y+HS+ I H NL P NI +
Sbjct: 99 NRTLYDLIHSENLNQQRDEYW-----RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESR 153
Query: 369 ASTEGYLHAKISGFGLS------------SVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ KI FGL+ +N S + + + A EVL+
Sbjct: 154 -------NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLD--- 203
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD--KMSRNIRAGERPLFPFH 474
Y+EK D YS G+I FE + PF + + K R++ P F +
Sbjct: 204 -----GTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIEFPPDFDDN 255
Query: 475 SPKYVTNLTKRCWHADPNQRPSFSSIC 501
K + + DPN+RP ++
Sbjct: 256 KXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 32/181 (17%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECF----LIMELMSRDLCSYIKEICCPRKRIPFS 329
E+ L + H N++ L FT F L+M M DL + + FS
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG--------MEFS 142
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKN 389
L+ Q+ +G++Y+HS + H +L P N+ + KI FGL+ +
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED-------CELKILDFGLARHAD 195
Query: 390 FGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+G + APEV+ S Y++ D++S G I E+LTGK F
Sbjct: 196 -----AEMTGYVVTRWYRAPEVI--------LSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
Query: 450 E 450
+
Sbjct: 243 K 243
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS--VKNFGPKSPS 396
+I +E+LH I + ++ NILL G H ++ FGLS V + ++
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNG-------HVVLTDFGLSKEFVADETERAYD 219
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQG 456
GT + AP+++ +S + + D +S G++ +E+LTG PF + G
Sbjct: 220 FCGTIE---YMAPDIVR-------GGDSGHDKAVDWWSLGVLMYELLTGASPFT---VDG 266
Query: 457 DK-----MSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
+K +SR I E P +P +L +R DP +R
Sbjct: 267 EKNSQAEISRRILKSEPP-YPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 97/241 (40%), Gaps = 49/241 (20%)
Query: 227 PSRILIK-SEDYQVRRRLGSGSQYKEILW-----LGESFALRHFFGDIEPLVP-----EI 275
P RI+ S D+Q++ LG G+ Y + GE A++ +PL EI
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGA-YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 276 SSLLSLSHPNIMH-FLCGFTD--EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPV 332
L H NI+ F D E E ++I ELM DL I I +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY---- 116
Query: 333 AVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL------SS 386
+ Q R ++ LH + H +L PSN+L+ K+ FGL S+
Sbjct: 117 ---FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN-------CDLKVCDFGLARIIDESA 166
Query: 387 VKNFGPKSPSQSGTTHPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
N P QSG F+ + APEV+ +++KYS DV+S G I E+
Sbjct: 167 ADNSEPTG-QQSGMVE-FVATRWYRAPEVM--------LTSAKYSRAMDVWSCGCILAEL 216
Query: 443 L 443
Sbjct: 217 F 217
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ KRIP
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKEAKRIPEE 114
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + RG+ YL K +I H ++ PSNIL+ RG K+ FG+S +
Sbjct: 115 ILGKVSI--AVLRGLAYLREKHQIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 164
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + APE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 165 LIDSMANSFVGTRS---YMAPERLQ---------GTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 449 F 449
Sbjct: 213 I 213
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME M D+ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + K++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIKVADFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME M D+ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + K++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIKVADFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 39/286 (13%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 67 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 119
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS-- 394
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 120 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 168
Query: 395 -PSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 169 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 226 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 95/243 (39%), Gaps = 52/243 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L +ME S + IC +
Sbjct: 65 EIINHRSLRHPNIVRF---------KEVILTPTHLAIVMEYASGG--ELFERICNAGR-- 111
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y H+ ++ H +L N LL A KI FG S
Sbjct: 112 -FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-----RLKICAFGYSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ S GT + APEVL + E Y K +DV+S G+ + +L G
Sbjct: 166 SSVLHSQPKSTVGTP---AYIAPEVLLKKE---------YDGKVADVWSCGVTLYVMLVG 213
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLF--PFHSPKYV------TNLTKRCWHADPNQRPSF 497
PFED + +N R + + P YV +L R + ADP +R S
Sbjct: 214 AYPFEDP-----EEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 498 SSI 500
I
Sbjct: 269 PEI 271
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 39/286 (13%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 111 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 163
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS-- 394
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 164 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 212
Query: 395 -PSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 213 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 270 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 39/286 (13%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 63 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 115
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS-- 394
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 116 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 164
Query: 395 -PSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 165 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 222 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 58/202 (28%)
Query: 266 GDIEPLVPEISSLLSLS-HPNIMHFLCGFTDEEKKECFLIMELMS--------------- 309
G + LV + S+L+++ H NI+H F E +E +I E +S
Sbjct: 42 GTDQVLVKKEISILNIARHRNILHLHESF--ESMEELVMIFEFISGLDIFERINTSAFEL 99
Query: 310 --RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPR 367
R++ SY+ ++C +++LHS I H ++ P NI+ + R
Sbjct: 100 NEREIVSYVHQVC---------------------EALQFLHSHNIGHFDIRPENIIYQTR 138
Query: 368 GASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYS 427
+ST KI FG + P + T P ++APEV + + S
Sbjct: 139 RSST-----IKIIEFG--QARQLKPGDNFRLLFTAPE-YYAPEVHQHD---------VVS 181
Query: 428 EKSDVYSFGMICFEILTGKVPF 449
+D++S G + + +L+G PF
Sbjct: 182 TATDMWSLGTLVYVLLSGINPF 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 74/186 (39%), Gaps = 39/186 (20%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L IME S + E C R
Sbjct: 66 EIINHRSLRHPNIVRF---------KEVILTPTHLAIIMEYASG---GELYERICNAGR- 112
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y HS +I H +L N LL A KI FG S
Sbjct: 113 -FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP-----RLKICDFGYSK 166
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ S GT + APEVL E Y K +DV+S G+ + +L G
Sbjct: 167 SSVLHSQPKSTVGTP---AYIAPEVLLRQE---------YDGKIADVWSCGVTLYVMLVG 214
Query: 446 KVPFED 451
PFED
Sbjct: 215 AYPFED 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS---------- 385
L QI + Y+HS+ I H +L P NI + + KI FGL+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESR-------NVKIGDFGLAKNVHRSLDIL 173
Query: 386 --SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+N S + + ++ A EVL+ Y+EK D+YS G+I FE++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLD--------GTGHYNEKIDMYSLGIIFFEMI 225
Query: 444 TGKVPFEDAHLQGD--KMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC 501
PF + + K R++ P F + K + + DPN+RP ++
Sbjct: 226 ---YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + R + YLH++ + H ++ +ILL G K+S FG + V PK
Sbjct: 148 LSVLRALSYLHNQGVIHRDIKSDSILLTSDG-------RIKLSDFGFCAQVSKEVPKRKX 200
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
GT + W APEV+ S Y + D++S G++ E++ G+ P+
Sbjct: 201 LVGTPY---WMAPEVI---------SRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 52/239 (21%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWL--------GESFALRHF--------FGDIEPLVPEI 275
I+ E +++ R LG G Y ++ + G+ FA++ D E
Sbjct: 14 IRPECFELLRVLGKGG-YGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 276 SSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVD 335
+ L + HP I+ + F K +LI+E +S E R+ I F A
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGK--LYLILEYLSGGELFMQLE----REGI-FMEDTACF 125
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSP 395
+ +I+ + +LH K I + +L P NI+L +G H K++ FGL K
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-------HVKLTDFGLC-------KES 171
Query: 396 SQSGT-THPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
GT TH F + APE+L S ++ D +S G + +++LTG PF
Sbjct: 172 IHDGTVTHTFCGTIEYMAPEIL---------MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 239 VRRRLGSGSQYKEILWLGESFALRH------FFGDIEPLVPEISSLLS-LSHPNIM--HF 289
VRR +G Q E L + H FF E +S++S LSH +++ +
Sbjct: 28 VRREVGDYGQLHETEVLLKVLDKAHRNYSESFF--------EAASMMSKLSHKHLVLNYG 79
Query: 290 LCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
+C DE L+ E + L +Y+K + + ++ +++ Q+A M +L
Sbjct: 80 VCVCGDEN----ILVQEFVKFGSLDTYLK-----KNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 349 SKKIYHGNLNPSNILL---KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
+ HGN+ NILL + R ++ G ++ + PK Q
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL----PKDILQERIP---- 182
Query: 406 WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRA 465
W PE +E + A +D +SFG +EI +G D L R ++
Sbjct: 183 WVPPECIENPKNLNLA--------TDKWSFGTTLWEICSGG----DKPLSALDSQRKLQF 230
Query: 466 GE-RPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
E R P + NL C +P+ RPSF +I R L +
Sbjct: 231 YEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 95/243 (39%), Gaps = 52/243 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L +ME S + IC +
Sbjct: 64 EIINHRSLRHPNIVRF---------KEVILTPTHLAIVMEYASGG--ELFERICNAGR-- 110
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y H+ ++ H +L N LL A KI FG S
Sbjct: 111 -FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-----RLKICDFGYSK 164
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ S GT + APEVL + E Y K +DV+S G+ + +L G
Sbjct: 165 SSVLHSQPKSTVGTP---AYIAPEVLLKKE---------YDGKVADVWSCGVTLYVMLVG 212
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLF--PFHSPKYV------TNLTKRCWHADPNQRPSF 497
PFED + +N R + + P YV +L R + ADP +R S
Sbjct: 213 AYPFEDP-----EEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 267
Query: 498 SSI 500
I
Sbjct: 268 PEI 270
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 324 KRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLK-PRGASTEGYLHAKISGF 382
KR F+ A ++ +A +++LH+K I H +L P NIL + P S KI F
Sbjct: 104 KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP-----VKICDF 158
Query: 383 GL-SSVKNFGPKSP-------SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYS 434
L S +K G SP + G+ + APEV+E S S Y ++ D++S
Sbjct: 159 DLGSGIKLNGDCSPISTPELLTPCGSAE---YMAPEVVE----AFSEEASIYDKRCDLWS 211
Query: 435 FGMICFEILTGKVPF 449
G+I + +L+G PF
Sbjct: 212 LGVILYILLSGYPPF 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 95/243 (39%), Gaps = 52/243 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L +ME S + IC +
Sbjct: 65 EIINHRSLRHPNIVRF---------KEVILTPTHLAIVMEYASGG--ELFERICNAGR-- 111
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y H+ ++ H +L N LL A KI FG S
Sbjct: 112 -FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-----RLKICDFGYSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ S GT + APEVL + E Y K +DV+S G+ + +L G
Sbjct: 166 SSVLHSQPKSTVGTP---AYIAPEVLLKKE---------YDGKVADVWSCGVTLYVMLVG 213
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLF--PFHSPKYV------TNLTKRCWHADPNQRPSF 497
PFED + +N R + + P YV +L R + ADP +R S
Sbjct: 214 AYPFEDP-----EEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 498 SSI 500
I
Sbjct: 269 PEI 271
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 52/239 (21%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWL--------GESFALRHF--------FGDIEPLVPEI 275
I+ E +++ R LG G Y ++ + G+ FA++ D E
Sbjct: 14 IRPECFELLRVLGKGG-YGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 276 SSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVD 335
+ L + HP I+ + F K +LI+E +S E R+ I F A
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGK--LYLILEYLSGGELFMQLE----REGI-FMEDTACF 125
Query: 336 LMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSP 395
+ +I+ + +LH K I + +L P NI+L +G H K++ FGL K
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-------HVKLTDFGLC-------KES 171
Query: 396 SQSGT-THPFI----WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
GT TH F + APE+L S ++ D +S G + +++LTG PF
Sbjct: 172 IHDGTVTHXFCGTIEYMAPEIL---------MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 58/313 (18%)
Query: 234 SEDYQVRRRLGSGSQYKEIL---WLGESFALRHFFGDIEP---LVPEISSLLSLSHPNIM 287
+ D + +G G +Y E+ W GE+ A++ F E E+ + + L H NI+
Sbjct: 7 ARDITLLECVGKG-RYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 288 HFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYL 347
F+ L + ++ S + + + ++L IA G+ +L
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 348 HSK--------KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-----SVKNFGPKS 394
H + I H +L NIL+K G I+ GL+ S +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC-------IADLGLAVMHSQSTNQLDVGN 174
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV------- 447
+ GT + APEVL+E Q + + K + D+++FG++ +E+ V
Sbjct: 175 NPRVGTKR---YMAPEVLDETIQVDCFDSYK---RVDIWAFGLVLWEVARRMVSNGIVED 228
Query: 448 ---PFEDAHLQGDKMSRNIRA-----GERPLFP---FHSPKYVT--NLTKRCWHADPNQR 494
PF D + D ++R +RP P F P + L K CW+ +P+ R
Sbjct: 229 YKPPFYDV-VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 495 PSFSSICRILRYI 507
+ I + L I
Sbjct: 288 LTALRIKKTLTKI 300
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 43/215 (20%)
Query: 299 KECFLIME--LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI+ L +L S I++ R F+ A ++ I ++YLHS I H +
Sbjct: 131 RKCLLIVXECLDGGELFSRIQD----RGDQAFTEREASEIXKSIGEAIQYLHSINIAHRD 186
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPF---IWHAPEVLE 413
+ P N+L + + K++ FG F ++ S + T P + APEVL
Sbjct: 187 VKPENLLYTSKRPNA----ILKLTDFG------FAKETTSHNSLTTPCYTPYYVAPEVL- 235
Query: 414 ENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMS----RNIRAGERP 469
KY + D +S G+I + +L G PF H G +S IR G+
Sbjct: 236 --------GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH--GLAISPGXKTRIRXGQ-- 283
Query: 470 LFPFHSPKY------VTNLTKRCWHADPNQRPSFS 498
+ F +P++ V L + +P QR + +
Sbjct: 284 -YEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTIT 317
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 39/286 (13%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 64 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 116
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS-- 394
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 117 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 165
Query: 395 -PSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 166 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 223 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISSLL 279
+K Y + +++GSG K L E +A+++ D + L + ++ L
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 280 SLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDLML 338
S I + TD+ +++ME + DL S++K+ +K I P+ ML
Sbjct: 85 QHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNML 137
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS---P 395
+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 138 E---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVVKD 186
Query: 396 SQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 187 SQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 244 NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 58/304 (19%)
Query: 243 LGSGSQYKEIL---WLGESFALRHFFGDIEP---LVPEISSLLSLSHPNIMHFLCGFTDE 296
+G G +Y E+ W GE+ A++ F E E+ + + L H NI+ F+
Sbjct: 16 VGKG-RYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK------ 350
L + ++ S + + + ++L IA G+ +LH +
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 351 --KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-----SVKNFGPKSPSQSGTTHP 403
I H +L NIL+K G I+ GL+ S + + GT
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCC-------IADLGLAVMHSQSTNQLDVGNNPRVGTKR- 182
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV----------PFEDAH 453
+ APEVL+E Q + + K + D+++FG++ +E+ V PF D
Sbjct: 183 --YMAPEVLDETIQVDCFDSYK---RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV- 236
Query: 454 LQGDKMSRNIRA-----GERPLFP---FHSPKYVT--NLTKRCWHADPNQRPSFSSICRI 503
+ D ++R +RP P F P + L K CW+ +P+ R + I +
Sbjct: 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296
Query: 504 LRYI 507
L I
Sbjct: 297 LTKI 300
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 33/283 (11%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 111 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 163
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPS 396
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 164 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 212
Query: 397 QSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHL 454
+ + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 455 QGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 39/286 (13%)
Query: 230 ILIKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISS 277
I +K Y + +++GSG K L E +A+++ D + L + ++
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 278 LLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDL 336
L S I + TD+ +++ME + DL S++K+ +K I P+
Sbjct: 111 LQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKN 163
Query: 337 MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS-- 394
ML+ + +H I H +L P+N L+ +G L K+ FG+++ S
Sbjct: 164 MLE---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIANQMQPDTTSVV 212
Query: 395 -PSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 213 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 270 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 239 VRRRLGSGSQYKEILWLGESFALRH------FFGDIEPLVPEISSLLS-LSHPNIM--HF 289
VRR +G Q E L + H FF E +S++S LSH +++ +
Sbjct: 28 VRREVGDYGQLHETEVLLKVLDKAHRNYSESFF--------EAASMMSKLSHKHLVLNYG 79
Query: 290 LCGFTDEEKKECFLIMELMS-RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLH 348
+C DE L+ E + L +Y+K + + ++ +++ Q+A M +L
Sbjct: 80 VCFCGDEN----ILVQEFVKFGSLDTYLK-----KNKNCINILWKLEVAKQLAWAMHFLE 130
Query: 349 SKKIYHGNLNPSNILL---KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI 405
+ HGN+ NILL + R ++ G ++ + PK Q
Sbjct: 131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL----PKDILQERIP---- 182
Query: 406 WHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRA 465
W PE +E + A +D +SFG +EI +G D L R ++
Sbjct: 183 WVPPECIENPKNLNLA--------TDKWSFGTTLWEICSGG----DKPLSALDSQRKLQF 230
Query: 466 GE-RPLFPFHSPKYVTNLTKRCWHADPNQRPSFSSICRILRYI 507
E R P + NL C +P+ RPSF +I R L +
Sbjct: 231 YEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
E E LI+E + I +C P S + L+ QI G+ YLH I H
Sbjct: 99 ENTSEIILILEYAAG---GEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL 155
Query: 356 NLNPSNILLK---PRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVL 412
+L P NILL P G KI FG+S + GT + APE+L
Sbjct: 156 DLKPQNILLSSIYPLG-------DIKIVDFGMSRKIGHACELREIMGTPE---YLAPEIL 205
Query: 413 EENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQGDKMSR-NIRAGERP 469
+ T + +D+++ G+I + +LT PF ED +S+ N+ E
Sbjct: 206 NYDPITTA---------TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 470 LFPFHSPKYVTNLTKRCWHADPNQRPSFSSIC 501
+ T+ + +P +RP+ + IC
Sbjct: 257 FSSV--SQLATDFIQSLLVKNPEKRPT-AEIC 285
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 41/224 (18%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNI+ ++E +L+ +L++ ++I R +S A + QI
Sbjct: 87 LKHPNIVRLHDSISEEGFH--YLVFDLVTGG--ELFEDIVA---REYYSEADASHCIHQI 139
Query: 341 ARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+ ++H I H +L P N+LL K +GA+ K++ FGL +++ G +
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAV------KLADFGL-AIEVQGEQQAWFG 192
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQG 456
P + +PEVL ++ Y + D+++ G+I + +L G PF ED H
Sbjct: 193 FAGTPG-YLSPEVLRKD---------PYGKPVDIWACGVILYILLVGYPPFWDEDQH--- 239
Query: 457 DKMSRNIRAGERPLFPFHSPKYVT------NLTKRCWHADPNQR 494
K+ + I+AG + F SP++ T NL + +P +R
Sbjct: 240 -KLYQQIKAGA---YDFPSPEWDTVTPEAKNLINQMLTINPAKR 279
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 94/243 (38%), Gaps = 52/243 (21%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFL-------IMELMSRDLCSYIKEICCPRKRI 326
EI + SL HPNI+ F KE L +ME S + IC +
Sbjct: 65 EIINHRSLRHPNIVRF---------KEVILTPTHLAIVMEYASGG--ELFERICNAGR-- 111
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS A Q+ G+ Y H+ ++ H +L N LL A KI FG S
Sbjct: 112 -FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-----RLKICAFGYSK 165
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK-SDVYSFGMICFEILTG 445
+ GT + APEVL + E Y K +DV+S G+ + +L G
Sbjct: 166 SSVLHSQPKDTVGTP---AYIAPEVLLKKE---------YDGKVADVWSCGVTLYVMLVG 213
Query: 446 KVPFEDAHLQGDKMSRNIRAGERPLF--PFHSPKYV------TNLTKRCWHADPNQRPSF 497
PFED + +N R + + P YV +L R + ADP +R S
Sbjct: 214 AYPFEDP-----EEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 498 SSI 500
I
Sbjct: 269 PEI 271
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
P + A++++ + + + H I H ++ P+NIL+ A K+ FG++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNA-------VKVVDFGIAR 164
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + G + + +PE A +SDVYS G + +E+LTG
Sbjct: 165 AIADSGNSVXQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 446 KVPF 449
+ PF
Sbjct: 216 EPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKEC----FLIMELMS----RDLCSYIKEICCPRKR 325
E + +L+HP I+ T E + +++ME + RD+ + + P++
Sbjct: 62 EAQNAAALNHPAIVAVYA--TGEAETPAGPLPYIVMEYVDGVTLRDIV-HTEGPMTPKR- 117
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
A++++ + + + H I H ++ P+NI++ A K+ FG++
Sbjct: 118 -------AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------VKVMDFGIA 163
Query: 386 -SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
++ + G + + +PE A +SDVYS G + +E+LT
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLT 214
Query: 445 GKVPF 449
G+ PF
Sbjct: 215 GEPPF 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 45 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPET 104
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 162
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 163 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 207
Query: 434 SFGMICFEILTGK 446
S G + E+L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 57/342 (16%)
Query: 237 YQVRRRLGSGS----QYKEILWLGESFALRHFFGDIEPLVPEIS---SLLSLSHPNIMHF 289
+QV R G G+ Q + G S A++ D E+ L L HPNI+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 290 LCGF---TDEEKKECFL--IMELMSRDLCSYIKEICCPR--KRIPFSLPVAVDLML-QIA 341
F + ++++ +L +ME + L CC +R P+ + + L Q+
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTL-----HRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 342 RGMEYLH--SKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSG 399
R + LH S + H ++ P N+L+ +G L K+ FG S K P P+ +
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVN----EADGTL--KLCDFG--SAKKLSPSEPNVAY 191
Query: 400 TTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD-- 457
+ + APE++ N Y+ D++S G I E++ G+ F + G
Sbjct: 192 ICSRY-YRAPELI--------FGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242
Query: 458 KMSRNI----RAGERPLFPFHSPKYVTNLTKRCW------HADPNQRPSFSSICRILRYI 507
++ R + R R L P H+ + N W H+ + + ++ + +L+Y+
Sbjct: 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYL 302
Query: 508 KRFIM------MNPHYNSQPDPPMPLVDYSDIESRLLRKFPS 543
M +P+++ DP L + D+ L R P+
Sbjct: 303 PEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLPN 344
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 58/304 (19%)
Query: 243 LGSGSQYKEIL---WLGESFALRHFFGDIEP---LVPEISSLLSLSHPNIMHFLCGFTDE 296
+G G +Y E+ W GE+ A++ F E E+ + + L H NI+ F+
Sbjct: 45 VGKG-RYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK------ 350
L + ++ S + + + ++L IA G+ +LH +
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 351 --KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-----SVKNFGPKSPSQSGTTHP 403
I H +L NIL+K G I+ GL+ S + + GT
Sbjct: 160 KPAIAHRDLKSKNILVKKNG-------QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 211
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKV----------PFEDAH 453
+ APEVL+E Q + + K + D+++FG++ +E+ V PF D
Sbjct: 212 --YMAPEVLDETIQVDCFDSYK---RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV- 265
Query: 454 LQGDKMSRNIRA-----GERPLFP---FHSPKYVT--NLTKRCWHADPNQRPSFSSICRI 503
+ D ++R +RP P F P + L K CW+ +P+ R + I +
Sbjct: 266 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 325
Query: 504 LRYI 507
L I
Sbjct: 326 LTKI 329
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 302 FLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPS 360
+ +ME ++ DL +I+++ F P AV +I+ G+ +LH + I + +L
Sbjct: 96 YFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLD 149
Query: 361 NILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTES 420
N++L G H KI+ FG+ + + T +I APE++
Sbjct: 150 NVMLDSEG-------HIKIADFGMCKEHMMDGVTTREFCGTPDYI--APEII-------- 192
Query: 421 ASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+ Y + D +++G++ +E+L G+ PF+
Sbjct: 193 -AYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 43/286 (15%)
Query: 232 IKSEDYQVRRRLGSGSQYKEILWLGES---FALRHFF---GDIEPL------VPEISSLL 279
+K Y + +++GSG K L E +A+++ D + L + ++ L
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 280 SLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRI-PFSLPVAVDLML 338
S I + TD+ +++ME + DL S++K+ +K I P+ ML
Sbjct: 85 QHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNML 137
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK----- 393
+ + +H I H +L P+N L+ +G L K+ FG+++ P
Sbjct: 138 E---AVHTIHQHGIVHSDLKPANFLI------VDGML--KLIDFGIAN--QMQPDXXXVV 184
Query: 394 SPSQSGTTHPFIWHAPEVLEE--NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFED 451
SQ GT + + PE +++ + + S SK S KSDV+S G I + + GK PF+
Sbjct: 185 KDSQVGTVN---YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 452 AHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQRPSF 497
Q K+ I FP K + ++ K C DP QR S
Sbjct: 242 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
P + A++++ + + + H I H ++ P+NI++ A K+ FG++
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------VKVMDFGIAR 181
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + G + + +PE A +SDVYS G + +E+LTG
Sbjct: 182 AIADSGNSVTQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLTG 232
Query: 446 KVPF 449
+ PF
Sbjct: 233 EPPF 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 24/191 (12%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L L H NI+ ++K L+ E +DL Y C P +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLT--LVFEFCDQDLKKYFDS--CNGDLDP---EIV 103
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ Q+ +G+ + HS+ + H +L P N+L+ G K++ FGL+ + FG
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-------ELKLADFGLA--RAFGIP 154
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
S + P+VL YS D++S G I E+ P +
Sbjct: 155 VRCYSAEVVTLWYRPPDVL--------FGAKLYSTSIDMWSAGCIFAELANAARPLFPGN 206
Query: 454 LQGDKMSRNIR 464
D++ R R
Sbjct: 207 DVDDQLKRIFR 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
P + A++++ + + + H I H ++ P+NI++ A K+ FG++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------VKVMDFGIAR 164
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + G + + +PE A +SDVYS G + +E+LTG
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 446 KVPF 449
+ PF
Sbjct: 216 EPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
P + A++++ + + + H I H ++ P+NI++ A K+ FG++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------VKVMDFGIAR 164
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + G + + +PE A +SDVYS G + +E+LTG
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 446 KVPF 449
+ PF
Sbjct: 216 EPPF 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 20/172 (11%)
Query: 272 VPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLP 331
+ E+S L L H NI+ + LI E DL Y+ K S+
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHR--LHLIFEYAENDLKKYMD------KNPDVSMR 132
Query: 332 VAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
V + Q+ G+ + HS++ H +L P N+LL AS L KI FGL+ + FG
Sbjct: 133 VIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL--KIGDFGLA--RAFG 188
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEIL 443
+ + PE+L + YS D++S I E+L
Sbjct: 189 IPIRQFTHEIITLWYRPPEIL--------LGSRHYSTSVDIWSIACIWAEML 232
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS- 385
P + A++++ + + + H I H ++ P+NI++ A K+ FG++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------VKVMDFGIAR 164
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ + G + + +PE A +SDVYS G + +E+LTG
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPE---------QARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 446 KVPF 449
+ PF
Sbjct: 216 EPPF 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 24/191 (12%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
EI L L H NI+ ++K L+ E +DL Y C P +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLT--LVFEFCDQDLKKYFDS--CNGDLDP---EIV 103
Query: 334 VDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK 393
+ Q+ +G+ + HS+ + H +L P N+L+ G K++ FGL+ + FG
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-------ELKLANFGLA--RAFGIP 154
Query: 394 SPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH 453
S + P+VL YS D++S G I E+ P +
Sbjct: 155 VRCYSAEVVTLWYRPPDVL--------FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
Query: 454 LQGDKMSRNIR 464
D++ R R
Sbjct: 207 DVDDQLKRIFR 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 53/265 (20%)
Query: 234 SEDYQVRRRLG--------------SGSQYKEILWLGESFALRHFFGDIEPLVPEISSLL 279
+E+YQ+ LG +G +Y ++ + + R D + L E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR----DHQKLEREARICR 65
Query: 280 SLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQ 339
L HPNI+ ++E +LI +L++ ++I R +S A + Q
Sbjct: 66 LLKHPNIVRLHDSISEEGHH--YLIFDLVTGG--ELFEDIVA---REYYSEADASHCIQQ 118
Query: 340 IARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQ 397
I + + H + H NL P N+LL K +GA+ K++ FGL +++ G +
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAV------KLADFGL-AIEVEGEQQAWF 171
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQ 455
P + +PEVL ++ Y + D+++ G+I + +L G PF ED H
Sbjct: 172 GFAGTPG-YLSPEVLRKD---------PYGKPVDLWACGVILYILLVGYPPFWDEDQH-- 219
Query: 456 GDKMSRNIRAGERPLFPFHSPKYVT 480
++ + I+AG + F SP++ T
Sbjct: 220 --RLYQQIKAGA---YDFPSPEWDT 239
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
E K +++++LM DL I P +L + Q+ RG++Y+HS ++ H +
Sbjct: 130 EFKSVYVVLDLMESDLHQII------HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI--WHAPEVLEE 414
L PSN+L+ KI FG++ P T + + APE++
Sbjct: 184 LKPSNLLVNEN-------CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM-- 234
Query: 415 NEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
S +Y++ D++S G I E+L + F
Sbjct: 235 ------LSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 64 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 123
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 124 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 181
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 182 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 226
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 227 SAGCVLAELLLGQPIF 242
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 123
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 124 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 173
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 174 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 449 F 449
Sbjct: 222 I 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 45 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 162
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 163 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 207
Query: 434 SFGMICFEILTGK 446
S G + E+L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 53 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 112
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 113 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 170
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 171 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 215
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 216 SAGCVLAELLLGQPIF 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 45 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 162
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 163 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 207
Query: 434 SFGMICFEILTGK 446
S G + E+L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 57 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 174
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 175 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 219
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 220 SAGCVLAELLLGQPIF 235
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 46 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 105
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 106 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 163
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 164 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 208
Query: 434 SFGMICFEILTGK 446
S G + E+L G+
Sbjct: 209 SAGCVLAELLLGQ 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 239 VRRRLGSGSQYKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIM---HFLCGFTD 295
++R + S + + L +SF + ++ EI L HPNI+ F +
Sbjct: 51 IKRVFNTVSDGRTVNILSDSFLCKR-------VLREIRLLNHFHHPNILGLRDIFVHFEE 103
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
+ +L+ ELM DL I + +RI S M I G+ LH + H
Sbjct: 104 PAMHKLYLVTELMRTDLAQVIHD-----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHR 158
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH----APEV 411
+L+P NILL T I F N + + + TH ++ H APE+
Sbjct: 159 DLHPGNILLADNNDIT-------ICDF------NLAREDTADANKTH-YVTHRWYRAPEL 204
Query: 412 LEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ + + +++ D++S G + E+ K F
Sbjct: 205 VMQFK--------GFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ +GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLAGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 239 VRRRLGSGSQYKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNIM---HFLCGFTD 295
++R + S + + L +SF + ++ EI L HPNI+ F +
Sbjct: 51 IKRVFNTVSDGRTVNILSDSFLCKR-------VLREIRLLNHFHHPNILGLRDIFVHFEE 103
Query: 296 EEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHG 355
+ +L+ ELM DL I + +RI S M I G+ LH + H
Sbjct: 104 PAMHKLYLVTELMRTDLAQVIHD-----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHR 158
Query: 356 NLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWH----APEV 411
+L+P NILL T I F N + + + TH ++ H APE+
Sbjct: 159 DLHPGNILLADNNDIT-------ICDF------NLAREDTADANKTH-YVTHRWYRAPEL 204
Query: 412 LEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ + + +++ D++S G + E+ K F
Sbjct: 205 VMQFK--------GFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 57 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 174
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 175 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 219
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 220 SAGCVLAELLLGQPIF 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
E K +++++LM DL I P +L + Q+ RG++Y+HS ++ H +
Sbjct: 131 EFKSVYVVLDLMESDLHQII------HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI--WHAPEVLEE 414
L PSN+L+ KI FG++ P T + + APE++
Sbjct: 185 LKPSNLLVNEN-------CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM-- 235
Query: 415 NEQTESASNSKYSEKSDVYSFGMICFEILT 444
S +Y++ D++S G I E+L
Sbjct: 236 ------LSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 49 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 108
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 109 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 166
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 167 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 211
Query: 434 SFGMICFEILTGK 446
S G + E+L G+
Sbjct: 212 SAGCVLAELLLGQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 45 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 162
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 163 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 207
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 208 SAGCVLAELLLGQPIF 223
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKR 325
+IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG----- 136
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
FS P A QI EYLHS + + +L P N+++ +G + K++ FGL+
Sbjct: 137 -RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGLA 188
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 --KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAG 234
Query: 446 KVP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 235 YPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 131
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 132 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 181
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 182 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 449 F 449
Sbjct: 230 I 230
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 58 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 117
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 118 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 175
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 176 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 220
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 221 SAGCVLAELLLGQPIF 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 79 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 196
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 197 ----KLCDFG--SAKQLVRGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVW 241
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 242 SAGCVLAELLLGQPIF 257
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 282 SHPNIMHFLCGFTDEEKKECFLIME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
+ NI+ + F D+ + +L+ E L + ++I+ K+ F+ A ++ +
Sbjct: 69 GNKNILELIEFFEDDTR--FYLVFEKLQGGSILAHIQ------KQKHFNEREASRVVRDV 120
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK-----SP 395
A +++LH+K I H +L P NIL + S E KI F L S +P
Sbjct: 121 AAALDFLHTKGIAHRDLKPENILCE----SPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 396 SQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ + APEV+E + + Y ++ D++S G++ + +L+G PF
Sbjct: 177 ELTTPCGSAEYMAPEVVE----VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 104
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 105 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 154
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 155 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 449 F 449
Sbjct: 203 I 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 104
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 105 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 154
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 155 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 449 F 449
Sbjct: 203 I 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLXGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 71 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 122
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 123 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 174
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ + GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 175 -KRVKGRTWTLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 221
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 222 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + K++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIKVADFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
E+ + L H NI+ F +K+ + + L+ + + + + R +LPV
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 334 -VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
V L M Q+ R + Y+HS I H ++ P N+LL P A K+ FG S K
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL------KLCDFG--SAKQLV 174
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
P+ S + + APE++ + Y+ DV+S G + E+L G+
Sbjct: 175 RGEPNVSXICSRY-YRAPELI--------FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 72 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 123
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 124 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQG-------YIQVTDFGFA- 175
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 176 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 222
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 223 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 50 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 109
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 110 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 167
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 168 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 212
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 213 SAGCVLAELLLGQPIF 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPEAL---APEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 104
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 105 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 154
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 155 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 449 F 449
Sbjct: 203 I 203
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADEPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 73 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 132
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 133 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 190
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 191 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 235
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 236 SAGCVLAELLLGQPIF 251
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 104
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 105 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 154
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 155 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 449 F 449
Sbjct: 203 I 203
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ + GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWTLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 79 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 196
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 197 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 241
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 242 SAGCVLAELLLGQPIF 257
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 166
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 167 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 216
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 217 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 264
Query: 449 F 449
Sbjct: 265 I 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 104
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 105 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 154
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ S GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 155 LIDSMANSFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 449 F 449
Sbjct: 203 I 203
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 35/204 (17%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNI+ ++E +L+ +L++ ++I R +S A + QI
Sbjct: 60 LKHPNIVRLHDSISEEGFH--YLVFDLVTGG--ELFEDIVA---REYYSEADASHCIQQI 112
Query: 341 ARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+ + H I H +L P N+LL K +GA+ K++ FGL+ ++
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAV------KLADFGLAIEVQGDQQAWFGF 166
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQG 456
T ++ +PEVL ++ Y + D+++ G+I + +L G PF ED H
Sbjct: 167 AGTPGYL--SPEVLRKD---------PYGKPVDMWACGVILYILLVGYPPFWDEDQH--- 212
Query: 457 DKMSRNIRAGERPLFPFHSPKYVT 480
++ + I+AG + F SP++ T
Sbjct: 213 -RLYQQIKAGA---YDFPSPEWDT 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 81 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 140
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 141 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 198
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 199 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 243
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 244 SAGCVLAELLLGQPIF 259
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 132 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 184
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 185 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
Query: 456 GDKMSRN 462
KM R+
Sbjct: 233 AMKMIRD 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 35/204 (17%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNI+ ++E +L+ +L++ ++I R +S A + QI
Sbjct: 60 LKHPNIVRLHDSISEEGFH--YLVFDLVTGG--ELFEDIVA---REYYSEADASHCIQQI 112
Query: 341 ARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+ + H I H +L P N+LL K +GA+ K++ FGL+ ++
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAV------KLADFGLAIEVQGDQQAWFGF 166
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQG 456
T ++ +PEVL ++ Y + D+++ G+I + +L G PF ED H
Sbjct: 167 AGTPGYL--SPEVLRKD---------PYGKPVDMWACGVILYILLVGYPPFWDEDQH--- 212
Query: 457 DKMSRNIRAGERPLFPFHSPKYVT 480
++ + I+AG + F SP++ T
Sbjct: 213 -RLYQQIKAGA---YDFPSPEWDT 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 83 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 142
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 143 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 200
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 201 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 245
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 246 SAGCVLAELLLGQPIF 261
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 46/281 (16%)
Query: 227 PSRILIKSEDYQVRRRLGSGSQYKEILW----LGESFALRHF-------FGDIEPLVPEI 275
P++ + ++ + LG+GS + +L G FA++ IE + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 276 SSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAV 334
L +++ P ++ F D +++ME + ++ S+++ I FS P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------RFSEPHAR 144
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS 394
QI EYLHS + + +L P N+L+ +G + +++ FG + K ++
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA--KRVKGRT 195
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAH 453
GT + APE++ + Y++ D ++ G++ +E+ G P F D
Sbjct: 196 WXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
+Q + I +G + FP H + +L + D +R
Sbjct: 244 IQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 256 GESFALRHFFGDIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSY 315
GE A++ D E+ + L H NI+ F +K+ + + L+ +
Sbjct: 124 GELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 183
Query: 316 IKEICCPRKRIPFSLPVA-VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEG 373
+ + R +LPV V L M Q+ R + Y+HS I H ++ P N+LL P A
Sbjct: 184 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-- 241
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
K+ FG S K P+ S + + APE++ + Y+ DV+
Sbjct: 242 ----KLCDFG--SAKQLVRGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVW 286
Query: 434 SFGMICFEILTGKVPF 449
S G + E+L G+ F
Sbjct: 287 SAGCVLAELLLGQPIF 302
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 46/281 (16%)
Query: 227 PSRILIKSEDYQVRRRLGSGSQYKEILW----LGESFALRHF-------FGDIEPLVPEI 275
P++ + ++ + LG+GS + +L G FA++ IE + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 276 SSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAV 334
L +++ P ++ F D +++ME + ++ S+++ I FS P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------RFSEPHAR 144
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS 394
QI EYLHS + + +L P N+L+ +G + +++ FG + K ++
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA--KRVKGRT 195
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAH 453
GT + APE++ + Y++ D ++ G++ +E+ G P F D
Sbjct: 196 WXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
+Q + I +G + FP H + +L + D +R
Sbjct: 244 IQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 267 DIEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKR 325
+IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG----- 136
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS 385
FS P A QI EYLHS + + +L P N+++ +G + +++ FGL+
Sbjct: 137 -RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIQVTDFGLA 188
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 --KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAG 234
Query: 446 KVP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 235 YPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 123 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 175
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 176 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
Query: 456 GDKMSRN 462
KM R+
Sbjct: 224 AMKMIRD 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 157
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 158 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 209
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K + + GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 210 -KRVKGATWTLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 256
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 257 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 134 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 186
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 187 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
Query: 456 GDKMSRN 462
KM R+
Sbjct: 235 AMKMIRD 241
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 26/205 (12%)
Query: 256 GESFALRHFFGDIEPLVP------EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS 309
G+ FA++ F +I L P E L L+H NI+ + + LIME
Sbjct: 34 GDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLML--QIARGMEYLHSKKIYHGNLNPSNILLKPR 367
C + + + LP + L++ + GM +L I H N+ P NI+ R
Sbjct: 93 ---CGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM---R 145
Query: 368 GASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT---THPFIWHAPEVLEENEQTESASNS 424
+G K++ FG + + S GT HP ++ VL ++ Q
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA-VLRKDHQ------K 198
Query: 425 KYSEKSDVYSFGMICFEILTGKVPF 449
KY D++S G+ + TG +PF
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 129
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 130 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 181
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 182 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 228
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 229 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 46/281 (16%)
Query: 227 PSRILIKSEDYQVRRRLGSGSQYKEILW----LGESFALRHF-------FGDIEPLVPEI 275
P++ + ++ + LG+GS + +L G FA++ IE + E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 276 SSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAV 334
L +++ P ++ F D +++ME + ++ S+++ I FS P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------RFSEPHAR 144
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS 394
QI EYLHS + + +L P N+L+ +G + +++ FG + K ++
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA--KRVKGRT 195
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAH 453
GT + APE++ + Y++ D ++ G++ +E+ G P F D
Sbjct: 196 WXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 454 LQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
+Q + I +G + FP H + +L + D +R
Sbjct: 244 IQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 281 LSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
L HPNI+ ++E +LI +L++ ++I R +S A + QI
Sbjct: 78 LKHPNIVRLHDSISEEGHH--YLIFDLVTGG--ELFEDIVA---REYYSEADASHCIQQI 130
Query: 341 ARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+ + H + H +L P N+LL K +GA+ K++ FGL +++ G +
Sbjct: 131 LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAV------KLADFGL-AIEVEGEQQAWFG 183
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF--EDAHLQG 456
P + +PEVL ++ Y + D+++ G+I + +L G PF ED H
Sbjct: 184 FAGTPG-YLSPEVLRKD---------PYGKPVDLWACGVILYILLVGYPPFWDEDQH--- 230
Query: 457 DKMSRNIRAGERPLFPFHSPKYVT 480
++ + I+AG + F SP++ T
Sbjct: 231 -RLYQQIKAGA---YDFPSPEWDT 250
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------ISKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F+ P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
E+ + L H NI+ F +K+ + + L+ + + + R +LPV
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 334 -VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
V L M Q+ R + Y+HS I H ++ P N+LL P A K+ FG S K
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL------KLCDFG--SAKQLV 174
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
P+ S + + APE++ + Y+ DV+S G + E+L G+
Sbjct: 175 RGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
+ K +IME + L +K + IP +L +++ + Q+ R + ++HS I H +
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNL-ISI-YIYQLFRAVGFIHSLGICHRD 166
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ P N+L+ + + K+ FG S K P PS + F + APE++
Sbjct: 167 IKPQNLLVNSKDNT------LKLCDFG--SAKKLIPSEPSVAXICSRF-YRAPELM---- 213
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERP 469
++Y+ D++S G + E++ GK P D++ R I+ P
Sbjct: 214 ----LGATEYTPSIDLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQIMGTP 261
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 274 EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVA 333
E+ + L H NI+ F +K+ + + L+ + + + R +LPV
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 334 -VDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFG 391
V L M Q+ R + Y+HS I H ++ P N+LL P A K+ FG S K
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL------KLCDFG--SAKQLV 174
Query: 392 PKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
P+ S + + APE++ + Y+ DV+S G + E+L G+
Sbjct: 175 RGEPNVSYICSRY-YRAPELI--------FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 127 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 179
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 180 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
Query: 456 GDKMSRN 462
KM R+
Sbjct: 228 AMKMIRD 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +++ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYQMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 157
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 158 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 209
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 210 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 256
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 257 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 300 ECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK-KIYHGNLN 358
+ ++ EL L + K++ + IP + + + I + +E+LHSK + H ++
Sbjct: 107 DVWICXELXDTSLDKFYKQVIDKGQTIPED--ILGKIAVSIVKALEHLHSKLSVIHRDVK 164
Query: 359 PSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQT 418
PSN+L+ G K FG+S +G + APE +
Sbjct: 165 PSNVLINALG-------QVKXCDFGISGYLVDDVAKDIDAGCKP---YXAPERI-----N 209
Query: 419 ESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKY 478
+ YS KSD++S G+ E+ + P++ G + + E P + K+
Sbjct: 210 PELNQKGYSVKSDIWSLGITXIELAILRFPYDS---WGTPFQQLKQVVEEPSPQLPADKF 266
Query: 479 ---VTNLTKRCWHADPNQRPSF 497
+ T +C + +RP++
Sbjct: 267 SAEFVDFTSQCLKKNSKERPTY 288
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 254 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 306
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 307 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354
Query: 456 GDKMSRN 462
KM R+
Sbjct: 355 AMKMIRD 361
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGL-SSVKNFGPKSPS 396
L + + + LH++ + H ++ +ILL G K+S FG + V P+
Sbjct: 177 LAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------RVKLSDFGFCAQVSKEVPRRKX 229
Query: 397 QSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQ 455
GT + W APE++ S Y + D++S G++ E++ G+ P F + L+
Sbjct: 230 LVGTPY---WMAPELI---------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
Query: 456 GDKMSRN 462
KM R+
Sbjct: 278 AMKMIRD 284
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 34/177 (19%)
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILL--KPRGASTEGYLHAKISGFGLS 385
+S A + QI + + H + H +L P N+LL K +GA+ K++ FGL+
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAV------KLADFGLA 153
Query: 386 SVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTG 445
++ T ++ +PEVL + Y + D+++ G+I + +L G
Sbjct: 154 IEVQGDQQAWFGFAGTPGYL--SPEVLRKE---------AYGKPVDIWACGVILYILLVG 202
Query: 446 KVPF--EDAHLQGDKMSRNIRAGERPLFPFHSPKYVT------NLTKRCWHADPNQR 494
PF ED H K+ + I+AG + F SP++ T NL + +P +R
Sbjct: 203 YPPFWDEDQH----KLYQQIKAGA---YDFPSPEWDTVTPEAKNLINQMLTINPAKR 252
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 30/183 (16%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VPF 449
PF
Sbjct: 236 PPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 80 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 131
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 132 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 183
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 184 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 230
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 231 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 274 EISSLLSLSHPNIMHFLCGF--TDEEKKECFL--IMELMSRDLCSYIKEICCPRKRIPFS 329
E+ + + HPN++ F ++K E FL ++E + + + ++ +P
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 330 LPVAVDL-MLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
L + L M Q+ R + Y+HS I H ++ P N+LL P G L K+ FG + +
Sbjct: 142 L---IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP----PSGVL--KLIDFGSAKIL 192
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
G + S + + + APE++ + Y+ D++S G + E++ G+
Sbjct: 193 IAGEPNVSXICSRY---YRAPELI--------FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 274 EISSLLSLSHPNIMHFL--CGFTDEEKKEC----FLIMELMSRDLCSYIKEICCPRKRIP 327
EI L L H N+++ + C C +L+ + DL + + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VK 121
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+L +M + G+ Y+H KI H ++ +N+L+ G K++ FGL+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-------LKLADFGLARA 174
Query: 388 KNFGPKS-PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ S P++ +W+ P L E+ Y D++ G I E+ T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERD-------YGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 274 EISSLLSLSHPNIMHFL--CGFTDEEKKEC----FLIMELMSRDLCSYIKEICCPRKRIP 327
EI L L H N+++ + C C +L+ + DL + + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VK 121
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+L +M + G+ Y+H KI H ++ +N+L+ G K++ FGL+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-------LKLADFGLARA 174
Query: 388 KNFGPKS-PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ S P++ +W+ P L E+ Y D++ G I E+ T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERD-------YGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 274 EISSLLSLSHPNIMHFL--CGFTDEEKKEC----FLIMELMSRDLCSYIKEICCPRKRIP 327
EI L L H N+++ + C C +L+ + DL + + +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VK 120
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+L +M + G+ Y+H KI H ++ +N+L+ G K++ FGL+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-------LKLADFGLARA 173
Query: 388 KNFGPKS-PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ S P++ +W+ P L E+ Y D++ G I E+ T
Sbjct: 174 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERD-------YGPPIDLWGAGCIMAEMWT 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 285 NIMH-FLCG--FTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRIPFSLPVAVDLMLQI 340
N+ H FL G F+ + + + +++ ++ +L +++ C F P A +I
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC------FLEPRARFYAAEI 148
Query: 341 ARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT 400
A + YLHS I + +L P NILL +G H ++ FGL +N S + +
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQG-------HIVLTDFGLCK-ENIEHNSTTSTFC 200
Query: 401 THPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
P + APEVL + Y D + G + +E+L G PF
Sbjct: 201 GTP-EYLAPEVLHK---------QPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 271 LVPEISSLLSLSHPNIMHFLCGF-TDEEKKECFLIMELMSRDLCSYIKEICCPRKRIPFS 329
++ E+ L + P I+ F F +D E C M+ S D ++ RIP
Sbjct: 54 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD------QVLKKAGRIPEQ 107
Query: 330 LPVAVDLMLQIARGMEYLHSK-KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVK 388
+ V + + +G+ YL K KI H ++ PSNIL+ RG K+ FG+S +
Sbjct: 108 ILGKVSI--AVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------EIKLCDFGVSG-Q 157
Query: 389 NFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP 448
+ GT + +PE L+ + YS +SD++S G+ E+ G+ P
Sbjct: 158 LIDEMANEFVGTRS---YMSPERLQ---------GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 274 EISSLLSLSHPNIMHFL--CGFTDEEKKEC----FLIMELMSRDLCSYIKEICCPRKRIP 327
EI L L H N+++ + C C +L+ + DL + + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VK 121
Query: 328 FSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSV 387
F+L +M + G+ Y+H KI H ++ +N+L+ G K++ FGL+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-------LKLADFGLARA 174
Query: 388 KNFGPKS-PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILT 444
+ S P++ +W+ P L E+ Y D++ G I E+ T
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGER-------DYGPPIDLWGAGCIMAEMWT 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P + F D +++ME ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P + F D +++ME ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 138 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 292 GFTDEEKKEC-FLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK 350
G D+ K F+IM+ DL I E R FS + L L+I +EY+H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDL-QKIYEANAKR----FSRKTVLQLSLRILDILEYIHEH 171
Query: 351 KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPE 410
+ HG++ SN+LL + + +GL+ + P+ ++ P H
Sbjct: 172 EYVHGDIKASNLLLNYKNPD-----QVYLVDYGLAY--RYCPEGVHKAYAADPKRCHDGT 224
Query: 411 VLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPL 470
+ E ++ + S + D+ G + LTG +P+ED +L+ K R+ + R
Sbjct: 225 I--EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRYR-- 279
Query: 471 FPFHSPKYVTNLTKRCWHA--DPNQRPSFSSICRILRYIKRFIMMN 514
+ + +L +C+ A P + + ++L Y ++ + N
Sbjct: 280 ------ENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + AP ++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPAII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 323 RKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGF 382
R++ P + P AV ++ QI ++ H+ H ++ P NIL+ S + + A + F
Sbjct: 126 RRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV-----SADDF--AYLVDF 178
Query: 383 GLSSVKNFGPKSPSQSGTTHPFIWH-APEVLEENEQTESASNSKYSEKSDVYSFGMICFE 441
G++S + +Q G T +++ APE E+ T ++D+Y+ + +E
Sbjct: 179 GIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATY---------RADIYALTCVLYE 227
Query: 442 ILTGKVPFEDAHLQGDKMS 460
LTG P+ QGD++S
Sbjct: 228 CLTGSPPY-----QGDQLS 241
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 26/205 (12%)
Query: 256 GESFALRHFFGDIEPLVP------EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS 309
G+ FA++ F +I L P E L L+H NI+ + + LIME
Sbjct: 34 GDLFAIK-VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLML--QIARGMEYLHSKKIYHGNLNPSNILLKPR 367
C + + + LP + L++ + GM +L I H N+ P NI+ R
Sbjct: 93 ---CGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM---R 145
Query: 368 GASTEGYLHAKISGFGLSSVKNFGPKSPSQSGT---THPFIWHAPEVLEENEQTESASNS 424
+G K++ FG + + GT HP ++ VL ++ Q
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA-VLRKDHQ------K 198
Query: 425 KYSEKSDVYSFGMICFEILTGKVPF 449
KY D++S G+ + TG +PF
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMSR-DLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ ++ S+++ I
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIG------ 157
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 158 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 209
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 210 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 256
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 257 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 129
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 130 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 181
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 182 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 228
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 229 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
FS P A QI EYLHS + + +L P N+++ +G + +++ FG +
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 138 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME + ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+L+ +G + +++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-------YIQVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P ++ F D +++ME ++ S+++ I
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIG------ 136
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 137 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 188
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 189 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 236 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 335 DLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKS 394
D +L +A +LHS+ + H ++ P+NI L PRG K+ FGL
Sbjct: 165 DTLLALA----HLHSQGLVHLDVKPANIFLGPRG-------RCKLGDFGLLVELGTAGAG 213
Query: 395 PSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
Q G + APE+L+ Y +DV+S G+ E+
Sbjct: 214 EVQEGDPR---YMAPELLQ----------GSYGTAADVFSLGLTILEV 248
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQ 397
++ ++ +H H ++ P N+LL G H +++ FG + + G S
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNG-------HIRLADFGSCLKMNDDGTVQSSV 235
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD 457
+ T +I +PE+L+ E KY + D +S G+ +E+L G+ PF L +
Sbjct: 236 AVGTPDYI--SPEILQAMED----GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-E 288
Query: 458 KMSRNIRAGERPLFPFH 474
+ + ER FP H
Sbjct: 289 TYGKIMNHEERFQFPSH 305
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 33/204 (16%)
Query: 293 FTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKK 351
F+ ++ ++++E ++ S+++ I FS P A QI EYLHS
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 352 IYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEV 411
+ + +L P N+L+ +G + K++ FG + K ++ GT + APE+
Sbjct: 163 LIYRDLKPENLLIDQQG-------YIKVADFGFA--KRVKGRTWXLCGTPE---YLAPEI 210
Query: 412 LEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVP-FEDAHLQGDKMSRNIRAGERPL 470
+ + Y++ D ++ G++ +E+ G P F D +Q + I +G +
Sbjct: 211 I---------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---IYEKIVSG-KVR 257
Query: 471 FPFHSPKYVTNLTKRCWHADPNQR 494
FP H + +L + D +R
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 303 LIMELM-SRDLCSYIKE-ICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPS 360
+ MEL+ L +KE C P R + L A++ G+EYLHS++I HG++
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALE-------GLEYLHSRRILHGDVKAD 195
Query: 361 NILLKPRGASTEGYLHAKISGFG 383
N+LL G+ HA + FG
Sbjct: 196 NVLLSSDGS------HAALCDFG 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 303 LIMELM-SRDLCSYIKE-ICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPS 360
+ MEL+ L +KE C P R + L A++ G+EYLHS++I HG++
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALE-------GLEYLHSRRILHGDVKAD 214
Query: 361 NILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTES 420
N+LL G+ HA + FG + P +S T +I E + E
Sbjct: 215 NVLLSSDGS------HAALCDFGHAVC--LQPDGLGKSLLTGDYI----PGTETHMAPEV 262
Query: 421 ASNSKYSEKSDVYSFGMICFEILTGKVPF 449
K DV+S + +L G P+
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLS-SVKNFGPKSPSQ 397
++ ++ +H H ++ P N+LL G H +++ FG + + G S
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNG-------HIRLADFGSCLKMNDDGTVQSSV 251
Query: 398 SGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGD 457
+ T +I +PE+L+ E KY + D +S G+ +E+L G+ PF L +
Sbjct: 252 AVGTPDYI--SPEILQAMED----GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-E 304
Query: 458 KMSRNIRAGERPLFPFH 474
+ + ER FP H
Sbjct: 305 TYGKIMNHEERFQFPSH 321
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 37/219 (16%)
Query: 243 LGSGSQYKEI---LWLGESFALRHFFGDIEP---LVPEISSLLSLSHPNIMHFLCGFTDE 296
+G G +Y E+ LW GES A++ F E EI + + L H NI+ F+
Sbjct: 16 VGKG-RYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 297 EKKECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK------ 350
L + + S + +R +A+ L + A G+ +LH +
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 351 --KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPK-----SPSQSGTTHP 403
I H + N+L+K L I+ GL+ + + G + + GT
Sbjct: 131 KPAIAHRDFKSRNVLVKSN-------LQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR- 182
Query: 404 FIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEI 442
+ APEVL+E +T+ + K+ +D+++FG++ +EI
Sbjct: 183 --YMAPEVLDEQIRTDCFESYKW---TDIWAFGLVLWEI 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I+ + YLH + I + +L N+LL G H K++ +G+ + P + +
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLLDSEG-------HIKLTDYGMCK-EGLRPGDTTST 212
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
P + APE+L Y D ++ G++ FE++ G+ PF+
Sbjct: 213 FCGTP-NYIAPEILR---------GEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 35/229 (15%)
Query: 268 IEPLVPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEICCPRKRI 326
IE + E L +++ P + F D +++ME ++ S+++ I
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIG------ 137
Query: 327 PFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSS 386
F P A QI EYLHS + + +L P N+++ +G + K++ FG +
Sbjct: 138 RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG-------YIKVTDFGFA- 189
Query: 387 VKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGK 446
K ++ GT + APE++ + Y++ D ++ G++ +E+ G
Sbjct: 190 -KRVKGRTWXLCGTPE---YLAPEII---------LSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 447 VP-FEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTNLTKRCWHADPNQR 494
P F D +Q + I +G + FP H + +L + D +R
Sbjct: 237 PPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I+ + YLH + I + +L N+LL G H K++ +G+ + P +
Sbjct: 129 EISLALNYLHERGIIYRDLKLDNVLLDSEG-------HIKLTDYGMCK-EGLRPGDTTSX 180
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
P + APE+L Y D ++ G++ FE++ G+ PF+
Sbjct: 181 FCGTP-NYIAPEILR---------GEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 54/210 (25%)
Query: 299 KECFLI-ME-LMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGN 356
++C LI ME L +L S I++ R F+ A ++M I ++YLHS I H +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 357 LNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENE 416
+ P N+L + + K++ FG +
Sbjct: 143 VKPENLLYTSKRPNA----ILKLTDFGFA------------------------------- 167
Query: 417 QTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAH--LQGDKMSRNIRAGERPLFPFH 474
+ + KY + D++S G+I + +L G PF H M IR G+ + F
Sbjct: 168 --KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---YEFP 222
Query: 475 SPKY------VTNLTKRCWHADPNQRPSFS 498
+P++ V L + +P QR + +
Sbjct: 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 272 VPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEI-CCPRKRIPFS 329
V E+ + LS P I+ E + MEL+ L IK++ C P R +
Sbjct: 112 VEELVACAGLSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 169
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L A++ G+EYLH+++I HG++ N+LL G+
Sbjct: 170 LGQALE-------GLEYLHTRRILHGDVKADNVLLSSDGS 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 272 VPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEI-CCPRKRIPFS 329
V E+ + LS P I+ E + MEL+ L IK++ C P R +
Sbjct: 98 VEELVACAGLSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 155
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L A++ G+EYLH+++I HG++ N+LL G+
Sbjct: 156 LGQALE-------GLEYLHTRRILHGDVKADNVLLSSDGS 188
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I+ + YLH + I + +L N+LL G H K++ +G+ + P +
Sbjct: 114 EISLALNYLHERGIIYRDLKLDNVLLDSEG-------HIKLTDYGMCK-EGLRPGDTTSX 165
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
P + APE+L Y D ++ G++ FE++ G+ PF+
Sbjct: 166 FCGTP-NYIAPEILR---------GEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 272 VPEISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELM-SRDLCSYIKEI-CCPRKRIPFS 329
V E+ + LS P I+ E + MEL+ L IK++ C P R +
Sbjct: 114 VEELVACAGLSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 171
Query: 330 LPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
L A++ G+EYLH+++I HG++ N+LL G+
Sbjct: 172 LGQALE-------GLEYLHTRRILHGDVKADNVLLSSDGS 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 339 QIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQS 398
+I+ + YLH + I + +L N+LL G H K++ +G+ + P +
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLLDSEG-------HIKLTDYGMCK-EGLRPGDTTSX 169
Query: 399 GTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFE 450
P + APE+L Y D ++ G++ FE++ G+ PF+
Sbjct: 170 FCGTP-NYIAPEILR---------GEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 292 GFTDEEKKEC-FLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSK 350
G D+ K F+IM+ DL I E R FS + L L+I +EY+H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDL-QKIYEANAKR----FSRKTVLQLSLRILDILEYIHEH 171
Query: 351 KIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPE 410
+ HG++ SN+LL + + +GL+ + P+ + P H
Sbjct: 172 EYVHGDIKASNLLLNYKNPD-----QVYLVDYGLAY--RYCPEGVHKEYKEDPKRCHDGT 224
Query: 411 VLEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPL 470
+ E ++ + S + D+ G + LTG +P+ED +L+ K R+ + R
Sbjct: 225 I--EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRYR-- 279
Query: 471 FPFHSPKYVTNLTKRCW--HADPNQRPSFSSICRILRYIKRFIMMN 514
+ + +L +C+ P + + ++L Y ++ + N
Sbjct: 280 ------ENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 302 FLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSN 361
F+IM+ DL I E R FS + L L+I +EY+H + HG++ SN
Sbjct: 128 FMIMDRFGSDL-QKIYEANAKR----FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN 182
Query: 362 ILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESA 421
+LL + + +GL+ + P+ + P H + E ++
Sbjct: 183 LLLNYKNPD-----QVYLVDYGLAY--RYCPEGVHKEYKEDPKRCHDGTI--EFTSIDAH 233
Query: 422 SNSKYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTN 481
+ S + D+ G + LTG +P+ED +L+ K R+ + R + + +
Sbjct: 234 NGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRYR--------ENIAS 284
Query: 482 LTKRCW--HADPNQRPSFSSICRILRYIKRFIMMN 514
L +C+ P + + ++L Y ++ + N
Sbjct: 285 LMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 75/254 (29%)
Query: 237 YQVRRRLGSGSQ----------YKEILWLGESFALRHFFGDIEPLVPEISSLLSLSHPNI 286
Y++R +G+GS K ++ + + + D + ++ EI+ L L+H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 287 MHFLCGFT--DEEK-KECFLIMELMSRDLCSYIKEICCPRKRIPFSLPVAVD------LM 337
+ L D EK E ++++E+ D K++ F PV + L+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDF-----------KKL-FRTPVYLTELHIKTLL 162
Query: 338 LQIARGMEYLHSKKIYHGNLNPSNILLKPRGASTEGYLHAKISGFGLSSVKNF------- 390
+ G++Y+HS I H +L P+N L+ + K+ FGL+ ++
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLVNQDCS-------VKVCDFGLARTVDYPENGNSQ 215
Query: 391 ---GPKSPSQSGTTHPFI---------------WHAPE--VLEENEQTESASNSKYSEKS 430
P+ + T P + APE +L+EN Y+E
Sbjct: 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN----------YTEAI 265
Query: 431 DVYSFGMICFEILT 444
DV+S G I E+L
Sbjct: 266 DVWSIGCIFAELLN 279
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 32/232 (13%)
Query: 256 GESFALRHFF-GDIEPLVP-----EISSLLSLSHPNIMHFLCGFTDEEKKECFLIMELMS 309
G+ A++ F + +P++ EI L L HPN+++ L F K+ L+ E
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF--RRKRRLHLVFEYCD 85
Query: 310 RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILLKPRGA 369
+ + E+ ++ +P L ++ Q + + + H H ++ P NIL+
Sbjct: 86 H---TVLHELDRYQRGVPEHLVKSI--TWQTLQAVNFCHKHNCIHRDVKPENILITKHSV 140
Query: 370 STEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEK 429
K+ FG + + GP + + +PE+L +++Y
Sbjct: 141 -------IKLCDFGFARLLT-GPSDYYDDEVATRW-YRSPELL--------VGDTQYGPP 183
Query: 430 SDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHSPKYVTN 481
DV++ G + E+L+G VP D++ IR L P H + TN
Sbjct: 184 VDVWAIGCVFAELLSG-VPLWPGKSDVDQLYL-IRKTLGDLIPRHQQVFSTN 233
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 28/158 (17%)
Query: 303 LIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNI 362
++ EL+ +IKE +PF L + QI + + +LHS K+ H +L P NI
Sbjct: 94 IVFELLGLSTYDFIKE----NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENI 149
Query: 363 LLKPRGASTEGY-----------LHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEV 411
L + TE Y ++ I S + T H + APEV
Sbjct: 150 LF-VQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH---YRAPEV 205
Query: 412 LEENEQTESASNSKYSEKSDVYSFGMICFEILTGKVPF 449
+ +S+ DV+S G I E G F
Sbjct: 206 I---------LALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 37/211 (17%)
Query: 303 LIMELMS---RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNP 359
++MEL+ DL ++ C RK FSL + L Q+ +EY+HSK H ++ P
Sbjct: 80 MVMELLGPSLEDLFNF-----CSRK---FSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 131
Query: 360 SNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI-WHAPEVLEENEQT 418
N L+ G +G L + +FG + TH I + + L +
Sbjct: 132 DNFLM---GLGKKG---------NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179
Query: 419 ESASNS---KYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHS 475
S + + S + D+ S G + G +P+ QG K + + ER S
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERI-----S 229
Query: 476 PKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
K ++ + P++ ++ + CR LR+
Sbjct: 230 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRF 260
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 37/211 (17%)
Query: 303 LIMELMS---RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNP 359
++MEL+ DL ++ C RK FSL + L Q+ +EY+HSK H ++ P
Sbjct: 82 MVMELLGPSLEDLFNF-----CSRK---FSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 133
Query: 360 SNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI-WHAPEVLEENEQT 418
N L+ G +G L + +FG + TH I + + L +
Sbjct: 134 DNFLM---GLGKKG---------NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181
Query: 419 ESASNS---KYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHS 475
S + + S + D+ S G + G +P+ QG K + + ER S
Sbjct: 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERI-----S 231
Query: 476 PKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
K ++ + P++ ++ + CR LR+
Sbjct: 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRF 262
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 326 IPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNILL------------KPRGASTEG 373
+P+ + + Q+ + +++LH K+ H +L P NIL K R +
Sbjct: 132 LPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVK 191
Query: 374 YLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQTESASNSKYSEKSDVY 433
++ FG ++ F + S +T + APEV+ E +S+ DV+
Sbjct: 192 STAVRVVDFGSAT---FDHEHHSTIVSTRHY--RAPEVILE---------LGWSQPCDVW 237
Query: 434 SFGMICFEILTGKVPFE 450
S G I FE G F+
Sbjct: 238 SIGCIIFEYYVGFTLFQ 254
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 8/149 (5%)
Query: 303 LIMELMSRDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNPSNI 362
+ EL+ ++ ++KE P+ LP + Q+ + +LH ++ H +L P NI
Sbjct: 99 IAFELLGKNTFEFLKE----NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENI 154
Query: 363 LLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFIWHAPEVLEENEQ-TESA 421
L T L+ + SVKN + T H V + + E
Sbjct: 155 LFVNSEFET---LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVI 211
Query: 422 SNSKYSEKSDVYSFGMICFEILTGKVPFE 450
+++ DV+S G I FE G F+
Sbjct: 212 LELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 37/211 (17%)
Query: 303 LIMELMS---RDLCSYIKEICCPRKRIPFSLPVAVDLMLQIARGMEYLHSKKIYHGNLNP 359
++MEL+ DL ++ C RK FSL + L Q+ +EY+HSK H ++ P
Sbjct: 82 MVMELLGPSLEDLFNF-----CSRK---FSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 133
Query: 360 SNILLKPRGASTEGYLHAKISGFGLSSVKNFGPKSPSQSGTTHPFI-WHAPEVLEENEQT 418
N L+ G +G L + +FG + TH I + + L +
Sbjct: 134 DNFLM---GLGKKG---------NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181
Query: 419 ESASNS---KYSEKSDVYSFGMICFEILTGKVPFEDAHLQGDKMSRNIRAGERPLFPFHS 475
S + + S + D+ S G + G +P+ QG K + + ER S
Sbjct: 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW-----QGLKAATKRQKYERI-----S 231
Query: 476 PKYVTNLTKRCWHADPNQRPSFSSICRILRY 506
K ++ + P++ ++ + CR LR+
Sbjct: 232 EKKMSTPIEVLCKGYPSEFSTYLNFCRSLRF 262
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,133,797
Number of Sequences: 62578
Number of extensions: 845455
Number of successful extensions: 4080
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 1825
Number of HSP's gapped (non-prelim): 1189
length of query: 683
length of database: 14,973,337
effective HSP length: 105
effective length of query: 578
effective length of database: 8,402,647
effective search space: 4856729966
effective search space used: 4856729966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)