BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038698
         (283 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1YH3|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain
 pdb|1YH3|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain
          Length = 256

 Score = 29.3 bits (64), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 2  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 61

Query: 92 YTP 94
          Y P
Sbjct: 62 YQP 64


>pdb|3ROK|A Chain A, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-27
 pdb|3ROK|B Chain B, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-27
 pdb|3ROM|A Chain A, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-48
 pdb|3ROM|B Chain B, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-48
 pdb|3ROQ|A Chain A, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-46
 pdb|3ROQ|B Chain B, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-46
 pdb|3ROP|A Chain A, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-50b
 pdb|3ROP|B Chain B, Crystal Structure Of Human Cd38 In Complex With Compound
          Cz-50b
          Length = 254

 Score = 28.9 bits (63), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 4  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 63

Query: 92 YTP 94
          Y P
Sbjct: 64 YQP 66


>pdb|3DZJ|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain
          E226q Mutant, Nmn Complex
 pdb|3DZJ|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain
          E226q Mutant, Nmn Complex
          Length = 262

 Score = 28.9 bits (63), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|2HCT|A Chain A, Acidic Residues At The Active Sites Of Cd38 And
          Adp-Ribosyl Cyclase Determine Naapd Synthesis And
          Hydrolysis Activities
 pdb|2HCT|B Chain B, Acidic Residues At The Active Sites Of Cd38 And
          Adp-Ribosyl Cyclase Determine Naapd Synthesis And
          Hydrolysis Activities
          Length = 262

 Score = 28.9 bits (63), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|3OFS|A Chain A, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
 pdb|3OFS|B Chain B, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
 pdb|3OFS|C Chain C, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
 pdb|3OFS|D Chain D, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
 pdb|3OFS|E Chain E, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
 pdb|3OFS|F Chain F, Dynamic Conformations Of The Cd38-Mediated Nad
          Cyclization Captured Using Multi-Copy Crystallography
          Length = 257

 Score = 28.9 bits (63), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 3  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 62

Query: 92 YTP 94
          Y P
Sbjct: 63 YQP 65


>pdb|2O3S|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3S|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
          Length = 262

 Score = 28.9 bits (63), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|2I65|A Chain A, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2I65|B Chain B, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2O3Q|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3Q|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3T|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3T|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3U|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3U|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2PGL|A Chain A, Catalysis Associated Conformational Changes Revealed By
          Human Cd38 Complexed With A Non-Hydrolyzable Substrate
          Analog
 pdb|2PGL|B Chain B, Catalysis Associated Conformational Changes Revealed By
          Human Cd38 Complexed With A Non-Hydrolyzable Substrate
          Analog
          Length = 262

 Score = 28.9 bits (63), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|2I66|A Chain A, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2I66|B Chain B, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2I67|A Chain A, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2I67|B Chain B, Structural Basis For The Mechanistic Understanding Human
          Cd38 Controlled Multiple Catalysis
 pdb|2PGJ|A Chain A, Catalysis Associated Conformational Changes Revealed By
          Human Cd38 Complexed With A Non-Hydrolyzable Substrate
          Analog
 pdb|2PGJ|B Chain B, Catalysis Associated Conformational Changes Revealed By
          Human Cd38 Complexed With A Non-Hydrolyzable Substrate
          Analog
 pdb|3DZF|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZF|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZF|C Chain C, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZF|D Chain D, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZF|E Chain E, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZF|F Chain F, Crystal Structure Of Human Cd38 Extracellular Domain
          Complexed With A Covalent Intermediate,
          Ara-F-Ribose-5'-Phosphate
 pdb|3DZG|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
          Ara-F- Ribose-5'-PhosphateNICOTINAMIDE COMPLEX
 pdb|3DZG|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
          Ara-F- Ribose-5'-PhosphateNICOTINAMIDE COMPLEX
 pdb|3DZH|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
          Gtp Complex
 pdb|3DZH|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
          Gtp Complex
 pdb|3DZI|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
          Ribose-5'-phosphate Intermediate/gtp Complex
 pdb|3DZI|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
          Ribose-5'-phosphate Intermediate/gtp Complex
 pdb|3DZK|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
          Nmn Complex
 pdb|3DZK|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
          Nmn Complex
 pdb|3I9M|A Chain A, Crystal Structure Of Human Cd38 Complexed With An Analog
          Ara-2'f-Adpr
 pdb|3I9M|B Chain B, Crystal Structure Of Human Cd38 Complexed With An Analog
          Ara-2'f-Adpr
 pdb|3I9N|A Chain A, Crystal Structure Of Human Cd38 Complexed With An Analog
          Ribo-2'f-Adp Ribose
 pdb|3I9N|B Chain B, Crystal Structure Of Human Cd38 Complexed With An Analog
          Ribo-2'f-Adp Ribose
 pdb|3U4H|A Chain A, Cd38 Structure-Based Inhibitor Design Using The
          N1-Cyclic Inosine 5'- Diphosphate Ribose Template
 pdb|3U4H|B Chain B, Cd38 Structure-Based Inhibitor Design Using The
          N1-Cyclic Inosine 5'- Diphosphate Ribose Template
 pdb|3U4I|A Chain A, Cd38 Structure-Based Inhibitor Design Using The
          N1-Cyclic Inosine 5'- Diphosphate Ribose Template
 pdb|3U4I|B Chain B, Cd38 Structure-Based Inhibitor Design Using The
          N1-Cyclic Inosine 5'- Diphosphate Ribose Template
          Length = 262

 Score = 28.9 bits (63), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|3RAJ|A Chain A, Crystal Structure Of Human Cd38 In Complex With The Fab
          Fragment Of Antibody Hb7
          Length = 257

 Score = 28.9 bits (63), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 3  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 62

Query: 92 YTP 94
          Y P
Sbjct: 63 YQP 65


>pdb|3F6Y|A Chain A, Conformational Closure Of The Catalytic Site Of Human
          Cd38 Induced By Calcium
          Length = 262

 Score = 28.9 bits (63), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|2O3R|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
 pdb|2O3R|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
          Messenger Cyclic Adp-Ribose By Human Cd38
          Length = 262

 Score = 28.9 bits (63), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 8  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 67

Query: 92 YTP 94
          Y P
Sbjct: 68 YQP 70


>pdb|1ZVM|A Chain A, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
          SynthetaseNAD+ Glycohydrolase
 pdb|1ZVM|B Chain B, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
          SynthetaseNAD+ Glycohydrolase
 pdb|1ZVM|C Chain C, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
          SynthetaseNAD+ Glycohydrolase
 pdb|1ZVM|D Chain D, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
          SynthetaseNAD+ Glycohydrolase
          Length = 256

 Score = 28.5 bits (62), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W++   G G T     T  A C  +T++  E  H D + V  +   A + K PCD+   D
Sbjct: 2  WRQQWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEED 61

Query: 92 YTP 94
          Y P
Sbjct: 62 YQP 64


>pdb|4H6B|A Chain A, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|D Chain D, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|C Chain C, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|B Chain B, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|E Chain E, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|F Chain F, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|G Chain G, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|H Chain H, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|I Chain I, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|J Chain J, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|K Chain K, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6B|L Chain L, Structural Basis For Allene Oxide Cyclization In Moss
 pdb|4H6C|A Chain A, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|D Chain D, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|C Chain C, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|B Chain B, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|E Chain E, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|F Chain F, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|G Chain G, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|H Chain H, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|I Chain I, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|J Chain J, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|K Chain K, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
 pdb|4H6C|L Chain L, Crystal Structure Of The Allene Oxide Cyclase 1 From
           Physcomitrella Patens
          Length = 195

 Score = 28.1 bits (61), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 13/79 (16%)

Query: 169 QGNVFKFPGGGTMFPQGADAYIDELASVIP----IKDGSVRTALDTGCGVASWGAYLLKR 224
           +G+    P GG   P G DA+++ L  ++P    I DGS++T L    G+ +  ++  ++
Sbjct: 30  RGSPVFLPFGGKKQP-GTDAHVNSLGDLVPFSNKIYDGSLKTRLGITAGLCTLISHSDQK 88

Query: 225 NVLTMSFAPRDNHEAQVQF 243
           N         D +EA   F
Sbjct: 89  N--------GDRYEALYSF 99


>pdb|2EF1|A Chain A, Crystal Structure Of The Extracellular Domain Of Human
          Cd38
 pdb|2EF1|B Chain B, Crystal Structure Of The Extracellular Domain Of Human
          Cd38
          Length = 256

 Score = 27.3 bits (59), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 33 WQKSGFGKGDTIASQITKQADCNIFTDLSFETHHNDVEIVEPSEPKAKVFK-PCDVKYSD 91
          W+++  G G T     T  A C  +T++  E  H D + V  +   A + K PC++   D
Sbjct: 2  WRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCNITEED 61

Query: 92 YTP 94
          Y P
Sbjct: 62 YQP 64


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.137    0.441 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,407,827
Number of Sequences: 62578
Number of extensions: 421035
Number of successful extensions: 774
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 14
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)