Query 038702
Match_columns 154
No_of_seqs 299 out of 1100
Neff 12.2
Searched_HMMs 29240
Date Mon Mar 25 03:20:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.9E-31 6.4E-36 172.8 18.2 149 1-154 96-245 (344)
2 3ow8_A WD repeat-containing pr 100.0 5.4E-31 1.9E-35 169.2 16.9 141 1-153 179-319 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 9.4E-31 3.2E-35 169.2 18.1 142 1-152 199-340 (340)
4 4gqb_B Methylosome protein 50; 100.0 1.5E-30 5E-35 168.6 17.4 145 1-154 142-288 (344)
5 2ynn_A Coatomer subunit beta'; 100.0 3.4E-30 1.1E-34 164.3 18.1 142 1-153 28-170 (304)
6 3iz6_a 40S ribosomal protein R 100.0 3.5E-30 1.2E-34 168.7 17.7 148 1-154 221-374 (380)
7 2pbi_B Guanine nucleotide-bind 100.0 4.3E-30 1.5E-34 166.9 17.7 142 1-152 213-354 (354)
8 2ynn_A Coatomer subunit beta'; 100.0 1.1E-29 3.7E-34 162.0 19.1 143 1-154 112-258 (304)
9 1vyh_C Platelet-activating fac 100.0 8.6E-30 2.9E-34 168.4 17.9 141 1-153 123-263 (410)
10 1got_B GT-beta; complex (GTP-b 100.0 1.6E-29 5.6E-34 163.4 18.7 143 1-153 157-299 (340)
11 3ow8_A WD repeat-containing pr 100.0 1.6E-29 5.6E-34 162.3 17.5 142 1-154 137-278 (321)
12 2w18_A PALB2, fancn, partner a 100.0 2.3E-29 8E-34 160.4 15.8 146 1-154 196-356 (356)
13 3frx_A Guanine nucleotide-bind 100.0 4.8E-29 1.6E-33 160.0 17.4 141 1-154 80-226 (319)
14 1vyh_C Platelet-activating fac 100.0 5.6E-29 1.9E-33 164.5 18.0 142 1-154 249-410 (410)
15 4ery_A WD repeat-containing pr 100.0 1.8E-28 6E-33 156.7 19.0 142 1-154 38-179 (312)
16 4g56_B MGC81050 protein; prote 100.0 8E-29 2.7E-33 161.2 17.4 149 1-154 108-257 (357)
17 1erj_A Transcriptional repress 100.0 1.2E-28 4.1E-33 162.1 18.3 141 1-154 138-286 (393)
18 2pbi_B Guanine nucleotide-bind 100.0 3.1E-28 1.1E-32 158.2 18.9 143 1-153 169-313 (354)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-28 4.6E-33 159.4 16.9 146 1-153 76-223 (345)
20 4ery_A WD repeat-containing pr 100.0 4.8E-28 1.7E-32 154.6 19.2 143 1-154 80-222 (312)
21 4h5i_A Guanine nucleotide-exch 100.0 1.3E-28 4.6E-33 160.5 16.7 143 2-153 151-341 (365)
22 1nr0_A Actin interacting prote 100.0 1.8E-28 6.3E-33 169.0 18.0 145 1-154 163-354 (611)
23 2xzm_R RACK1; ribosome, transl 100.0 4.8E-28 1.6E-32 156.7 18.7 142 1-153 91-242 (343)
24 2hes_X YDR267CP; beta-propelle 100.0 2.4E-28 8.3E-33 157.4 17.0 149 1-153 73-228 (330)
25 2hes_X YDR267CP; beta-propelle 100.0 1.6E-28 5.3E-33 158.3 16.0 145 1-153 27-182 (330)
26 4g56_B MGC81050 protein; prote 100.0 1.6E-28 5.6E-33 159.7 16.0 145 1-154 154-300 (357)
27 2pm7_B Protein transport prote 100.0 1.2E-27 4.1E-32 152.1 18.5 147 1-154 70-237 (297)
28 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-28 3.7E-33 167.2 14.3 142 1-153 280-426 (524)
29 4e54_B DNA damage-binding prot 100.0 1E-28 3.4E-33 164.3 13.5 146 1-154 135-281 (435)
30 3vl1_A 26S proteasome regulato 100.0 1.8E-27 6.3E-32 157.1 19.1 148 1-154 154-321 (420)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-28 1.8E-32 156.6 16.2 145 1-153 31-179 (345)
32 3frx_A Guanine nucleotide-bind 100.0 1.8E-27 6.3E-32 152.6 17.1 141 1-153 169-315 (319)
33 1erj_A Transcriptional repress 100.0 1.3E-27 4.3E-32 157.2 16.5 145 1-153 222-387 (393)
34 3dm0_A Maltose-binding peripla 100.0 1E-27 3.4E-32 167.3 16.8 145 1-154 445-591 (694)
35 2ymu_A WD-40 repeat protein; u 100.0 2.2E-27 7.4E-32 162.2 17.8 137 1-152 441-577 (577)
36 3iz6_a 40S ribosomal protein R 100.0 2.7E-27 9.3E-32 155.1 17.4 142 1-153 173-327 (380)
37 2pm7_B Protein transport prote 100.0 8.9E-27 3E-31 148.1 18.9 146 1-153 24-187 (297)
38 2aq5_A Coronin-1A; WD40 repeat 100.0 6.6E-27 2.3E-31 154.1 18.8 149 1-154 97-253 (402)
39 4aow_A Guanine nucleotide-bind 100.0 4.3E-27 1.5E-31 151.4 17.1 139 2-153 189-335 (340)
40 2aq5_A Coronin-1A; WD40 repeat 100.0 7.8E-27 2.7E-31 153.7 18.0 145 2-154 51-206 (402)
41 2xzm_R RACK1; ribosome, transl 100.0 2.1E-26 7.2E-31 149.0 19.6 144 1-153 42-201 (343)
42 3dwl_C Actin-related protein 2 100.0 1.4E-27 4.6E-32 155.9 13.4 145 1-153 26-175 (377)
43 3vl1_A 26S proteasome regulato 100.0 3.5E-27 1.2E-31 155.8 15.1 143 1-154 112-277 (420)
44 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-26 5.4E-31 156.7 18.5 150 1-154 228-385 (524)
45 3bg1_A Protein SEC13 homolog; 100.0 1.4E-27 4.8E-32 153.0 12.0 148 1-154 74-246 (316)
46 1nr0_A Actin interacting prote 100.0 1.1E-26 3.9E-31 160.1 16.3 145 1-154 463-610 (611)
47 3lrv_A PRE-mRNA-splicing facto 100.0 3E-26 1E-30 148.2 17.3 146 1-154 88-243 (343)
48 3f3f_A Nucleoporin SEH1; struc 99.9 1.4E-26 4.6E-31 148.9 14.9 149 1-154 74-336 (351)
49 3gre_A Serine/threonine-protei 99.9 6E-26 2.1E-30 150.7 18.0 152 1-154 79-244 (437)
50 1sq9_A Antiviral protein SKI8; 99.9 4.1E-26 1.4E-30 149.7 16.8 146 1-154 200-394 (397)
51 3dm0_A Maltose-binding peripla 99.9 3.3E-26 1.1E-30 159.7 17.1 142 1-154 534-692 (694)
52 3dwl_C Actin-related protein 2 99.9 4E-27 1.4E-31 153.7 11.6 145 1-154 70-235 (377)
53 3lrv_A PRE-mRNA-splicing facto 99.9 3.9E-26 1.3E-30 147.7 16.0 142 1-153 142-290 (343)
54 3ei3_B DNA damage-binding prot 99.9 6.3E-26 2.1E-30 148.4 17.1 142 1-153 89-234 (383)
55 4gq1_A NUP37; propeller, trans 99.9 6.8E-27 2.3E-31 153.8 12.4 145 1-153 104-284 (393)
56 4aow_A Guanine nucleotide-bind 99.9 1.6E-25 5.4E-30 144.1 18.6 149 1-154 54-245 (340)
57 4gga_A P55CDC, cell division c 99.9 9.3E-26 3.2E-30 149.4 17.8 144 1-153 245-393 (420)
58 2ymu_A WD-40 repeat protein; u 99.9 8.8E-26 3E-30 154.3 17.8 138 1-153 400-537 (577)
59 3ei3_B DNA damage-binding prot 99.9 7.5E-26 2.6E-30 148.0 16.5 149 1-154 220-381 (383)
60 2oaj_A Protein SNI1; WD40 repe 99.9 1.2E-25 4E-30 160.6 18.4 147 1-153 450-659 (902)
61 3gre_A Serine/threonine-protei 99.9 2.2E-26 7.4E-31 152.9 13.3 144 1-154 185-358 (437)
62 3zwl_B Eukaryotic translation 99.9 3.8E-25 1.3E-29 143.4 18.7 142 1-154 190-345 (369)
63 4ggc_A P55CDC, cell division c 99.9 2.5E-25 8.7E-30 142.0 17.5 144 1-153 165-313 (318)
64 3mmy_A MRNA export factor; mRN 99.9 3E-25 1E-29 143.9 18.1 109 1-118 57-168 (368)
65 3f3f_A Nucleoporin SEH1; struc 99.9 1.7E-25 5.9E-30 143.8 16.7 148 1-153 26-247 (351)
66 1gxr_A ESG1, transducin-like e 99.9 8.7E-25 3E-29 140.3 20.0 146 1-154 66-213 (337)
67 1r5m_A SIR4-interacting protei 99.9 1.8E-25 6E-30 147.4 16.8 143 1-154 262-424 (425)
68 3i2n_A WD repeat-containing pr 99.9 6.4E-26 2.2E-30 146.7 14.2 144 1-154 183-352 (357)
69 4e54_B DNA damage-binding prot 99.9 6.3E-26 2.2E-30 150.9 14.1 151 1-154 266-429 (435)
70 3jrp_A Fusion protein of prote 99.9 3E-25 1E-29 144.4 17.0 146 1-154 72-239 (379)
71 3k26_A Polycomb protein EED; W 99.9 1E-25 3.5E-30 146.0 14.5 142 1-153 88-258 (366)
72 1gxr_A ESG1, transducin-like e 99.9 8.5E-25 2.9E-29 140.4 18.3 140 1-154 156-295 (337)
73 3dw8_B Serine/threonine-protei 99.9 3.6E-25 1.2E-29 147.2 16.9 147 1-154 192-372 (447)
74 1k8k_C P40, ARP2/3 complex 41 99.9 5.1E-25 1.8E-29 143.2 17.3 146 1-153 23-171 (372)
75 3vu4_A KMHSV2; beta-propeller 99.9 1.3E-24 4.5E-29 141.2 19.1 146 4-153 155-334 (355)
76 3zwl_B Eukaryotic translation 99.9 9.4E-25 3.2E-29 141.6 18.0 143 1-154 47-205 (369)
77 3sfz_A APAF-1, apoptotic pepti 99.9 5.2E-25 1.8E-29 161.3 18.5 141 1-153 630-772 (1249)
78 2pm9_A Protein WEB1, protein t 99.9 4.7E-25 1.6E-29 145.3 16.6 144 1-154 181-336 (416)
79 3bg1_A Protein SEC13 homolog; 99.9 1.1E-25 3.9E-30 144.2 13.0 147 1-153 120-291 (316)
80 3jrp_A Fusion protein of prote 99.9 4.9E-25 1.7E-29 143.4 16.1 146 1-153 26-189 (379)
81 1sq9_A Antiviral protein SKI8; 99.9 8.3E-25 2.8E-29 143.5 17.1 148 1-154 141-321 (397)
82 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-24 4E-29 141.5 17.5 144 2-154 75-270 (355)
83 4a11_B DNA excision repair pro 99.9 2.2E-24 7.5E-29 141.6 18.9 145 1-154 159-364 (408)
84 2xyi_A Probable histone-bindin 99.9 1.2E-24 4E-29 144.6 17.6 146 1-153 197-351 (430)
85 1pgu_A Actin interacting prote 99.9 1.5E-25 5.1E-30 153.9 13.7 142 1-154 459-613 (615)
86 3mkq_A Coatomer beta'-subunit; 99.9 6.5E-25 2.2E-29 155.0 17.0 142 1-153 28-170 (814)
87 3k26_A Polycomb protein EED; W 99.9 1.2E-24 4E-29 141.1 16.9 141 2-154 38-191 (366)
88 1r5m_A SIR4-interacting protei 99.9 2.9E-24 9.8E-29 141.6 18.3 140 1-153 220-359 (425)
89 1k8k_C P40, ARP2/3 complex 41 99.9 2.8E-24 9.7E-29 139.7 17.8 146 1-153 67-231 (372)
90 4aez_A CDC20, WD repeat-contai 99.9 1.3E-24 4.4E-29 143.2 16.1 141 1-154 232-379 (401)
91 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.3E-24 1.1E-28 143.1 18.2 139 2-154 119-270 (450)
92 2pm9_A Protein WEB1, protein t 99.9 6.8E-25 2.3E-29 144.6 14.6 152 1-154 82-248 (416)
93 2xyi_A Probable histone-bindin 99.9 3.9E-24 1.3E-28 142.1 18.2 150 1-154 144-308 (430)
94 2oaj_A Protein SNI1; WD40 repe 99.9 1.2E-24 4.2E-29 155.4 16.6 146 1-153 72-240 (902)
95 3dw8_B Serine/threonine-protei 99.9 1.9E-24 6.6E-29 143.6 15.9 149 1-154 110-314 (447)
96 3i2n_A WD repeat-containing pr 99.9 2.4E-24 8.1E-29 139.3 15.9 141 1-153 132-289 (357)
97 3v7d_B Cell division control p 99.9 2.2E-24 7.4E-29 144.2 16.1 143 1-154 176-340 (464)
98 4aez_A CDC20, WD repeat-contai 99.9 1E-23 3.4E-28 139.0 18.9 142 1-154 149-292 (401)
99 4a11_B DNA excision repair pro 99.9 1.2E-23 4.2E-28 138.0 19.0 145 1-153 59-216 (408)
100 3odt_A Protein DOA1; ubiquitin 99.9 1E-23 3.6E-28 134.1 17.0 137 1-154 158-295 (313)
101 3jro_A Fusion protein of prote 99.9 2.7E-24 9.4E-29 151.3 15.5 147 1-154 70-237 (753)
102 3jro_A Fusion protein of prote 99.9 6E-24 2E-28 149.6 15.1 146 1-153 24-187 (753)
103 1yfq_A Cell cycle arrest prote 99.9 1.9E-23 6.3E-28 134.6 16.0 143 1-154 115-281 (342)
104 3v7d_B Cell division control p 99.9 3.2E-23 1.1E-27 138.6 17.5 138 1-154 283-420 (464)
105 2j04_A TAU60, YPL007P, hypothe 99.9 3E-23 1E-27 140.0 17.1 137 1-154 100-253 (588)
106 3mkq_A Coatomer beta'-subunit; 99.9 3.2E-23 1.1E-27 146.5 18.2 144 1-154 70-216 (814)
107 4gq1_A NUP37; propeller, trans 99.9 3.9E-24 1.3E-28 140.7 12.4 148 1-154 159-347 (393)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.7E-23 1.9E-27 137.2 17.9 147 1-153 164-337 (450)
109 4ggc_A P55CDC, cell division c 99.9 8.4E-23 2.9E-27 130.3 17.5 138 2-153 39-179 (318)
110 3odt_A Protein DOA1; ubiquitin 99.9 5.8E-23 2E-27 130.7 16.4 141 1-153 32-172 (313)
111 3mmy_A MRNA export factor; mRN 99.9 1.6E-23 5.5E-28 135.8 13.9 143 1-151 101-342 (368)
112 1yfq_A Cell cycle arrest prote 99.9 1.5E-23 5.3E-28 135.0 13.7 142 1-154 26-178 (342)
113 1p22_A F-BOX/WD-repeat protein 99.9 7.3E-23 2.5E-27 136.1 17.2 139 1-154 186-324 (435)
114 3sfz_A APAF-1, apoptotic pepti 99.9 9E-23 3.1E-27 149.6 17.4 146 1-153 716-911 (1249)
115 4gga_A P55CDC, cell division c 99.9 2E-22 6.7E-27 133.6 17.2 139 3-153 120-259 (420)
116 1p22_A F-BOX/WD-repeat protein 99.9 2.2E-22 7.6E-27 133.8 16.8 138 1-153 226-363 (435)
117 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-23 1.5E-27 137.3 12.8 147 2-154 52-222 (434)
118 2j04_A TAU60, YPL007P, hypothe 99.9 6.2E-23 2.1E-27 138.5 12.7 116 30-154 83-210 (588)
119 2w18_A PALB2, fancn, partner a 99.9 2.3E-22 7.9E-27 128.5 14.2 138 6-154 155-313 (356)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6.2E-22 2.1E-26 131.9 16.6 136 1-154 212-347 (445)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.3E-21 4.4E-26 130.4 17.5 143 1-154 292-441 (445)
122 1pgu_A Actin interacting prote 99.9 6.5E-22 2.2E-26 135.9 16.4 145 1-154 176-327 (615)
123 4h5i_A Guanine nucleotide-exch 99.9 1.9E-21 6.6E-26 126.8 16.8 144 2-154 98-299 (365)
124 1l0q_A Surface layer protein; 99.9 5.7E-21 1.9E-25 125.2 18.8 139 1-154 5-146 (391)
125 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-21 6E-26 129.6 15.1 144 3-153 113-276 (434)
126 1l0q_A Surface layer protein; 99.9 8.1E-20 2.8E-24 119.7 19.5 138 2-154 132-274 (391)
127 3bws_A Protein LP49; two-domai 99.9 4.6E-20 1.6E-24 122.3 15.0 145 1-154 137-291 (433)
128 3bws_A Protein LP49; two-domai 99.8 1.8E-19 6.1E-24 119.5 17.1 141 1-154 184-333 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 9.7E-19 3.3E-23 115.9 18.0 131 8-153 159-298 (415)
130 1nir_A Nitrite reductase; hemo 99.8 1E-17 3.6E-22 114.3 19.8 142 1-153 152-309 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.3E-17 4.4E-22 110.6 16.9 139 1-154 193-343 (415)
132 1ri6_A Putative isomerase YBHE 99.8 2.4E-17 8.1E-22 106.0 13.1 143 2-154 9-159 (343)
133 1xfd_A DIP, dipeptidyl aminope 99.7 7.7E-17 2.6E-21 113.0 14.4 132 4-145 33-193 (723)
134 2ojh_A Uncharacterized protein 99.7 8.2E-17 2.8E-21 101.3 12.6 136 3-153 17-158 (297)
135 1z68_A Fibroblast activation p 99.7 3.5E-17 1.2E-21 114.8 11.9 130 3-145 31-189 (719)
136 3u4y_A Uncharacterized protein 99.7 3.7E-16 1.3E-20 100.3 15.7 139 1-154 13-159 (331)
137 1pby_B Quinohemoprotein amine 99.7 1.9E-16 6.5E-21 101.6 13.5 143 1-154 4-162 (337)
138 3o4h_A Acylamino-acid-releasin 99.7 9.7E-17 3.3E-21 110.3 11.9 131 6-153 130-274 (582)
139 2ecf_A Dipeptidyl peptidase IV 99.7 2.8E-16 9.7E-21 110.5 13.1 132 1-146 51-230 (741)
140 1ri6_A Putative isomerase YBHE 99.7 5.2E-15 1.8E-19 95.1 16.9 147 3-154 101-261 (343)
141 3scy_A Hypothetical bacterial 99.7 6.6E-15 2.3E-19 95.7 17.4 148 2-153 171-335 (361)
142 2z3z_A Dipeptidyl aminopeptida 99.7 4.7E-16 1.6E-20 108.9 12.7 142 6-154 99-292 (706)
143 3vgz_A Uncharacterized protein 99.7 8.9E-15 3.1E-19 94.5 16.9 139 5-154 161-302 (353)
144 3vgz_A Uncharacterized protein 99.7 2E-14 6.7E-19 92.9 18.0 143 2-154 105-261 (353)
145 1jmx_B Amine dehydrogenase; ox 99.7 1.4E-15 4.7E-20 98.1 12.4 141 1-153 14-173 (349)
146 1pby_B Quinohemoprotein amine 99.7 6.4E-15 2.2E-19 94.5 15.3 136 6-154 113-309 (337)
147 1nir_A Nitrite reductase; hemo 99.7 2.1E-14 7.3E-19 98.1 17.4 145 1-154 193-354 (543)
148 3u4y_A Uncharacterized protein 99.7 1.5E-14 5.3E-19 92.8 15.6 135 9-154 109-251 (331)
149 1k32_A Tricorn protease; prote 99.7 4.4E-15 1.5E-19 108.1 14.4 137 2-153 352-500 (1045)
150 2ojh_A Uncharacterized protein 99.7 9.6E-15 3.3E-19 91.8 14.2 138 6-154 106-257 (297)
151 3hfq_A Uncharacterized protein 99.6 4.6E-14 1.6E-18 91.2 17.2 148 2-153 156-315 (347)
152 2ecf_A Dipeptidyl peptidase IV 99.6 9E-15 3.1E-19 102.9 14.4 147 2-154 124-320 (741)
153 3hfq_A Uncharacterized protein 99.6 2.4E-14 8.1E-19 92.6 15.3 143 7-153 62-216 (347)
154 1k32_A Tricorn protease; prote 99.6 6.9E-15 2.4E-19 107.1 13.5 133 7-154 316-460 (1045)
155 1jmx_B Amine dehydrogenase; ox 99.6 5.3E-14 1.8E-18 90.7 15.5 137 7-154 124-324 (349)
156 2z3z_A Dipeptidyl aminopeptida 99.6 1E-14 3.6E-19 102.1 12.8 126 2-143 39-199 (706)
157 1xfd_A DIP, dipeptidyl aminope 99.6 2.5E-14 8.4E-19 100.4 12.9 143 7-154 90-288 (723)
158 3scy_A Hypothetical bacterial 99.6 8.5E-13 2.9E-17 85.8 19.0 148 3-154 115-290 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.9E-12 6.6E-17 84.4 18.9 141 6-153 117-289 (365)
160 4a5s_A Dipeptidyl peptidase 4 99.6 3.8E-14 1.3E-18 100.0 10.4 125 7-144 35-190 (740)
161 1q7f_A NHL, brain tumor CG1071 99.5 4.1E-12 1.4E-16 80.1 18.3 139 2-153 136-278 (286)
162 3o4h_A Acylamino-acid-releasin 99.5 1E-13 3.5E-18 95.3 10.7 131 8-153 175-313 (582)
163 1jof_A Carboxy-CIS,CIS-muconat 99.5 4E-13 1.4E-17 87.6 12.7 143 2-153 55-222 (365)
164 1z68_A Fibroblast activation p 99.5 7.6E-14 2.6E-18 98.1 8.3 138 7-152 89-284 (719)
165 3azo_A Aminopeptidase; POP fam 99.5 6.9E-13 2.3E-17 92.4 12.8 115 31-153 128-272 (662)
166 1qks_A Cytochrome CD1 nitrite 99.5 4.9E-11 1.7E-15 82.0 20.1 141 2-153 171-327 (567)
167 1q7f_A NHL, brain tumor CG1071 99.4 8.5E-11 2.9E-15 74.0 18.1 136 7-154 99-237 (286)
168 3azo_A Aminopeptidase; POP fam 99.4 2.5E-12 8.7E-17 89.6 12.1 132 8-152 161-320 (662)
169 3fvz_A Peptidyl-glycine alpha- 99.4 1.3E-10 4.3E-15 74.9 19.1 141 8-154 69-226 (329)
170 3no2_A Uncharacterized protein 99.4 3.8E-11 1.3E-15 75.6 15.8 141 1-154 8-154 (276)
171 1xip_A Nucleoporin NUP159; bet 99.4 1.1E-11 3.8E-16 81.2 12.8 132 1-153 52-189 (388)
172 4a5s_A Dipeptidyl peptidase 4 99.4 3.5E-12 1.2E-16 90.1 10.7 115 33-154 17-140 (740)
173 2oiz_A Aromatic amine dehydrog 99.4 1E-11 3.4E-16 81.0 11.4 136 6-153 29-180 (361)
174 3fvz_A Peptidyl-glycine alpha- 99.4 4.5E-11 1.5E-15 77.0 13.5 137 6-153 164-320 (329)
175 2oiz_A Aromatic amine dehydrog 99.3 1.1E-10 3.7E-15 76.2 14.3 64 85-154 259-333 (361)
176 2dg1_A DRP35, lactonase; beta 99.3 5.5E-10 1.9E-14 71.7 16.7 136 5-153 24-169 (333)
177 1xip_A Nucleoporin NUP159; bet 99.3 1.4E-10 4.9E-15 76.0 13.8 121 2-141 101-230 (388)
178 2gop_A Trilobed protease; beta 99.3 1.6E-10 5.4E-15 74.6 14.0 117 7-145 42-190 (347)
179 3dsm_A Uncharacterized protein 99.3 1.8E-10 6.1E-15 74.2 14.2 138 6-154 150-301 (328)
180 3pe7_A Oligogalacturonate lyas 99.3 2.5E-10 8.4E-15 74.7 14.4 140 3-153 52-223 (388)
181 2dg1_A DRP35, lactonase; beta 99.3 1.6E-09 5.6E-14 69.5 17.8 140 2-153 60-211 (333)
182 3c5m_A Oligogalacturonate lyas 99.3 3.3E-10 1.1E-14 74.1 14.5 136 5-154 165-328 (396)
183 2xdw_A Prolyl endopeptidase; a 99.3 1.7E-10 5.8E-15 81.3 13.9 116 31-153 123-266 (710)
184 3pe7_A Oligogalacturonate lyas 99.3 5.2E-11 1.8E-15 77.9 10.6 110 26-141 24-141 (388)
185 3dsm_A Uncharacterized protein 99.3 5.9E-10 2E-14 71.8 14.9 141 2-154 58-211 (328)
186 2xdw_A Prolyl endopeptidase; a 99.3 4.9E-10 1.7E-14 79.0 15.6 135 9-154 152-319 (710)
187 3e5z_A Putative gluconolactona 99.3 1.1E-09 3.8E-14 69.3 15.5 140 2-153 44-200 (296)
188 2bkl_A Prolyl endopeptidase; m 99.3 1.2E-10 4.2E-15 81.8 11.8 117 31-153 119-259 (695)
189 1rwi_B Serine/threonine-protei 99.2 1.4E-09 4.8E-14 67.8 14.0 139 4-154 125-263 (270)
190 2bkl_A Prolyl endopeptidase; m 99.2 2.2E-09 7.6E-14 75.5 15.9 141 3-154 142-303 (695)
191 3no2_A Uncharacterized protein 99.2 4.8E-09 1.6E-13 66.1 14.7 139 5-154 53-194 (276)
192 1rwi_B Serine/threonine-protei 99.2 4.4E-09 1.5E-13 65.5 14.5 137 5-154 43-179 (270)
193 3e5z_A Putative gluconolactona 99.1 3.3E-09 1.1E-13 67.2 13.3 134 4-154 86-245 (296)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 5.2E-08 1.8E-12 61.9 17.0 123 28-154 167-298 (314)
195 3c5m_A Oligogalacturonate lyas 99.0 1.5E-08 5E-13 66.3 13.6 129 8-151 216-378 (396)
196 3hrp_A Uncharacterized protein 99.0 7.2E-08 2.5E-12 64.0 16.9 143 3-154 147-297 (409)
197 1yr2_A Prolyl oligopeptidase; 99.0 5.6E-09 1.9E-13 74.1 12.1 115 31-153 161-301 (741)
198 3sjl_D Methylamine dehydrogena 99.0 1E-08 3.5E-13 67.3 12.2 133 7-153 58-206 (386)
199 2hz6_A Endoplasmic reticulum t 99.0 1.5E-11 5E-16 80.5 -1.1 136 1-153 12-147 (369)
200 2mad_H Methylamine dehydrogena 99.0 7E-08 2.4E-12 63.3 15.3 130 9-153 48-194 (373)
201 2z2n_A Virginiamycin B lyase; 99.0 4.6E-07 1.6E-11 57.0 18.1 136 4-153 116-253 (299)
202 2gop_A Trilobed protease; beta 99.0 2.2E-08 7.6E-13 64.5 12.2 123 9-152 86-250 (347)
203 3dr2_A Exported gluconolactona 99.0 1E-07 3.5E-12 60.7 14.8 139 2-153 61-222 (305)
204 3g4e_A Regucalcin; six bladed 99.0 6E-07 2.1E-11 56.9 18.0 137 3-153 30-178 (297)
205 1yr2_A Prolyl oligopeptidase; 99.0 4.6E-08 1.6E-12 69.4 14.0 135 8-154 189-349 (741)
206 1qks_A Cytochrome CD1 nitrite 98.9 3.5E-07 1.2E-11 63.1 17.3 146 2-154 212-372 (567)
207 2z2n_A Virginiamycin B lyase; 98.9 1E-06 3.5E-11 55.4 18.4 134 6-153 34-169 (299)
208 2iwa_A Glutamine cyclotransfer 98.9 3.1E-07 1.1E-11 57.4 14.1 142 3-153 81-235 (266)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 6.4E-07 2.2E-11 56.9 15.3 137 4-153 42-205 (314)
210 2ghs_A AGR_C_1268P; regucalcin 98.8 1.9E-06 6.5E-11 55.4 17.4 136 3-153 66-208 (326)
211 3iuj_A Prolyl endopeptidase; h 98.8 1.2E-07 4.1E-12 66.9 12.3 115 31-153 127-266 (693)
212 2hz6_A Endoplasmic reticulum t 98.8 6.8E-10 2.3E-14 72.7 1.0 134 2-153 53-190 (369)
213 3iuj_A Prolyl endopeptidase; h 98.8 3E-07 1E-11 64.9 14.2 140 4-154 151-313 (693)
214 3g4e_A Regucalcin; six bladed 98.8 1.8E-06 6.2E-11 54.7 16.4 111 29-144 145-262 (297)
215 2qc5_A Streptogramin B lactona 98.8 2.8E-06 9.5E-11 53.4 17.1 134 6-153 81-216 (300)
216 3c75_H MADH, methylamine dehyd 98.8 3.2E-07 1.1E-11 61.1 13.1 104 8-119 99-218 (426)
217 3hrp_A Uncharacterized protein 98.8 1.8E-06 6.1E-11 57.4 16.6 138 9-153 195-352 (409)
218 3sjl_D Methylamine dehydrogena 98.8 4.5E-07 1.5E-11 59.6 13.3 108 39-154 39-168 (386)
219 2qc5_A Streptogramin B lactona 98.7 7.9E-06 2.7E-10 51.4 19.7 135 5-153 38-174 (300)
220 2ece_A 462AA long hypothetical 98.7 4E-06 1.4E-10 56.1 16.1 146 2-152 100-286 (462)
221 1mda_H Methylamine dehydrogena 98.7 4.7E-07 1.6E-11 59.3 10.5 99 9-118 47-163 (368)
222 3nok_A Glutaminyl cyclase; bet 98.6 1.4E-05 4.9E-10 49.7 15.7 136 4-148 112-259 (268)
223 3nok_A Glutaminyl cyclase; bet 98.6 7.3E-06 2.5E-10 51.0 14.3 134 2-153 69-208 (268)
224 2mad_H Methylamine dehydrogena 98.6 2.1E-05 7.3E-10 51.6 17.2 113 38-154 218-349 (373)
225 3nol_A Glutamine cyclotransfer 98.6 1.3E-05 4.3E-10 49.9 14.7 135 4-147 103-248 (262)
226 1kb0_A Quinohemoprotein alcoho 98.6 4.1E-06 1.4E-10 59.1 14.2 81 54-141 457-537 (677)
227 1yiq_A Quinohemoprotein alcoho 98.5 2.8E-06 9.7E-11 60.0 12.4 84 53-143 454-537 (689)
228 3nol_A Glutamine cyclotransfer 98.5 8.5E-06 2.9E-10 50.7 12.4 136 3-153 58-199 (262)
229 2qe8_A Uncharacterized protein 98.5 1.6E-05 5.5E-10 51.5 14.2 121 33-154 17-153 (343)
230 2iwa_A Glutamine cyclotransfer 98.5 3.8E-05 1.3E-09 48.1 15.0 132 7-153 43-179 (266)
231 3dr2_A Exported gluconolactona 98.5 4.1E-05 1.4E-09 48.7 15.4 111 31-153 186-304 (305)
232 3mbr_X Glutamine cyclotransfer 98.4 5.1E-05 1.8E-09 46.8 15.9 136 4-148 81-228 (243)
233 3q7m_A Lipoprotein YFGL, BAMB; 98.4 7.9E-05 2.7E-09 48.7 16.6 134 2-153 243-376 (376)
234 2ece_A 462AA long hypothetical 98.4 3.1E-05 1.1E-09 51.9 14.2 141 7-153 163-350 (462)
235 1fwx_A Nitrous oxide reductase 98.4 3.4E-05 1.2E-09 53.3 14.0 136 6-153 173-359 (595)
236 3c75_H MADH, methylamine dehyd 98.4 1.6E-05 5.3E-10 53.2 12.1 105 42-154 82-208 (426)
237 2ghs_A AGR_C_1268P; regucalcin 98.3 0.00013 4.5E-09 46.9 17.1 110 30-145 176-293 (326)
238 3mbr_X Glutamine cyclotransfer 98.3 0.00011 3.9E-09 45.2 15.7 131 8-153 43-177 (243)
239 1fwx_A Nitrous oxide reductase 98.3 1.1E-05 3.9E-10 55.6 10.1 130 8-143 254-406 (595)
240 1yiq_A Quinohemoprotein alcoho 98.3 0.00023 7.8E-09 50.6 16.7 51 100-154 454-504 (689)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00022 7.7E-09 46.5 16.1 137 2-153 57-205 (376)
242 2xe4_A Oligopeptidase B; hydro 98.3 0.0002 6.8E-09 51.3 16.4 134 8-153 201-352 (751)
243 2xe4_A Oligopeptidase B; hydro 98.3 5.5E-05 1.9E-09 54.1 13.5 110 34-153 175-302 (751)
244 2qe8_A Uncharacterized protein 98.3 0.00013 4.5E-09 47.2 14.3 120 30-152 64-223 (343)
245 3tc9_A Hypothetical hydrolase; 98.2 0.00042 1.4E-08 46.5 16.4 132 8-153 159-299 (430)
246 1mda_H Methylamine dehydrogena 98.2 5.4E-05 1.9E-09 49.7 11.0 91 55-153 47-156 (368)
247 4hw6_A Hypothetical protein, I 98.1 0.00046 1.6E-08 46.3 15.1 134 8-153 162-302 (433)
248 2fp8_A Strictosidine synthase; 98.1 0.00056 1.9E-08 43.8 15.5 113 33-154 185-312 (322)
249 1npe_A Nidogen, entactin; glyc 98.0 0.0006 2.1E-08 42.4 19.2 138 5-154 55-197 (267)
250 1flg_A Protein (quinoprotein e 98.0 0.00067 2.3E-08 47.3 14.0 83 53-142 465-547 (582)
251 2ad6_A Methanol dehydrogenase 98.0 0.00096 3.3E-08 46.4 14.5 62 53-120 443-504 (571)
252 3hxj_A Pyrrolo-quinoline quino 97.9 0.00041 1.4E-08 44.2 11.8 132 2-153 111-242 (330)
253 1kb0_A Quinohemoprotein alcoho 97.9 0.00035 1.2E-08 49.5 12.2 146 2-153 132-344 (677)
254 2fp8_A Strictosidine synthase; 97.8 0.0017 5.9E-08 41.5 15.8 116 33-154 80-215 (322)
255 3hxj_A Pyrrolo-quinoline quino 97.8 0.001 3.6E-08 42.3 11.8 132 2-153 151-282 (330)
256 1k3i_A Galactose oxidase precu 97.8 0.0011 3.9E-08 46.7 12.5 113 37-153 190-321 (656)
257 1npe_A Nidogen, entactin; glyc 97.8 0.0022 7.5E-08 39.8 16.0 140 8-154 10-154 (267)
258 1kv9_A Type II quinohemoprotei 97.7 0.0024 8.2E-08 45.3 13.6 62 53-120 437-498 (668)
259 1w6s_A Methanol dehydrogenase 97.6 0.0074 2.5E-07 42.3 14.8 62 53-120 452-513 (599)
260 2p9w_A MAL S 1 allergenic prot 97.6 0.0048 1.7E-07 39.9 12.4 118 34-153 14-166 (334)
261 3v65_B Low-density lipoprotein 97.6 0.0066 2.3E-07 40.1 13.8 114 34-154 160-276 (386)
262 2p9w_A MAL S 1 allergenic prot 97.5 0.0067 2.3E-07 39.2 15.9 143 5-154 32-214 (334)
263 3amr_A 3-phytase; beta-propell 97.5 0.0073 2.5E-07 39.4 15.2 139 7-153 98-261 (355)
264 1kv9_A Type II quinohemoprotei 97.5 0.003 1E-07 44.8 11.4 148 2-153 121-331 (668)
265 3kya_A Putative phosphatase; s 97.5 0.011 3.7E-07 40.5 15.8 134 8-153 162-339 (496)
266 3v65_B Low-density lipoprotein 97.5 0.009 3.1E-07 39.5 16.6 136 7-154 95-233 (386)
267 3v64_C Agrin; beta propeller, 97.3 0.014 5E-07 37.9 16.7 115 33-154 116-233 (349)
268 3tc9_A Hypothetical hydrolase; 97.3 0.016 5.4E-07 38.9 12.6 111 34-154 138-256 (430)
269 2p4o_A Hypothetical protein; p 97.3 0.013 4.6E-07 37.2 16.9 112 33-153 32-145 (306)
270 1ijq_A LDL receptor, low-densi 97.3 0.015 5E-07 37.3 18.1 137 6-154 8-151 (316)
271 3v64_C Agrin; beta propeller, 97.2 0.019 6.6E-07 37.3 17.1 135 8-154 53-190 (349)
272 1ijq_A LDL receptor, low-densi 97.0 0.026 8.8E-07 36.2 18.2 115 33-154 77-194 (316)
273 3p5b_L Low density lipoprotein 97.0 0.036 1.2E-06 36.8 17.7 135 7-153 91-232 (400)
274 2ad6_A Methanol dehydrogenase 97.0 0.049 1.7E-06 38.0 16.2 50 100-153 443-492 (571)
275 1n7d_A LDL receptor, low-densi 96.9 0.012 4E-07 42.1 9.8 113 35-154 455-570 (699)
276 4hw6_A Hypothetical protein, I 96.8 0.053 1.8E-06 36.5 16.1 118 35-154 275-432 (433)
277 1k3i_A Galactose oxidase precu 96.8 0.037 1.3E-06 39.2 11.5 105 36-144 402-530 (656)
278 3qqz_A Putative uncharacterize 96.8 0.038 1.3E-06 34.4 16.4 142 4-154 45-203 (255)
279 3kya_A Putative phosphatase; s 96.8 0.063 2.2E-06 36.8 12.5 115 34-153 140-276 (496)
280 3sov_A LRP-6, low-density lipo 96.8 0.047 1.6E-06 35.1 16.4 115 33-154 79-196 (318)
281 3pbp_A Nucleoporin NUP82; beta 96.8 0.06 2.1E-06 36.2 16.3 114 34-150 67-207 (452)
282 1n7d_A LDL receptor, low-densi 96.7 0.028 9.7E-07 40.2 10.2 113 33-153 496-612 (699)
283 3m0c_C LDL receptor, low-densi 96.6 0.11 3.9E-06 37.8 16.5 116 32-154 470-588 (791)
284 1w6s_A Methanol dehydrogenase 96.6 0.11 3.8E-06 36.6 13.2 144 2-153 125-340 (599)
285 1flg_A Protein (quinoprotein e 96.5 0.11 3.8E-06 36.4 16.4 51 100-154 465-515 (582)
286 2p4o_A Hypothetical protein; p 96.5 0.074 2.5E-06 33.7 17.6 137 6-154 51-197 (306)
287 3p5b_L Low density lipoprotein 96.5 0.095 3.3E-06 34.8 18.7 117 31-154 157-276 (400)
288 3m0c_C LDL receptor, low-densi 96.5 0.16 5.4E-06 37.1 17.2 134 8-153 404-544 (791)
289 3sbq_A Nitrous-oxide reductase 96.5 0.13 4.4E-06 36.1 12.7 98 10-110 300-408 (638)
290 3sre_A PON1, serum paraoxonase 96.3 0.11 3.9E-06 34.0 16.9 141 6-154 81-251 (355)
291 4a2l_A BT_4663, two-component 96.3 0.2 6.8E-06 36.3 15.7 115 32-153 405-524 (795)
292 2ism_A Putative oxidoreductase 96.3 0.12 4.1E-06 33.7 14.3 107 32-142 30-152 (352)
293 3a9g_A Putative uncharacterize 95.8 0.21 7.2E-06 32.6 13.8 106 32-142 28-152 (354)
294 3qqz_A Putative uncharacterize 95.8 0.17 5.8E-06 31.6 14.5 116 30-151 24-149 (255)
295 2xzh_A Clathrin heavy chain 1; 95.7 0.23 7.7E-06 32.5 13.0 103 8-120 87-198 (365)
296 3s94_A LRP-6, low-density lipo 95.3 0.49 1.7E-05 33.5 15.2 115 33-154 84-201 (619)
297 1bpo_A Protein (clathrin); cla 95.1 0.49 1.7E-05 32.3 13.4 103 8-120 86-197 (494)
298 3pbp_A Nucleoporin NUP82; beta 94.9 0.55 1.9E-05 31.8 14.7 110 40-154 28-157 (452)
299 1tl2_A L10, protein (tachylect 94.8 0.37 1.3E-05 29.6 11.0 106 33-149 41-157 (236)
300 3sre_A PON1, serum paraoxonase 94.6 0.59 2E-05 30.7 12.1 100 33-143 165-285 (355)
301 4gq2_M Nucleoporin NUP120; bet 94.5 1.1 3.7E-05 33.6 13.8 36 83-118 239-274 (950)
302 3amr_A 3-phytase; beta-propell 94.5 0.62 2.1E-05 30.6 16.2 137 4-152 46-207 (355)
303 2be1_A Serine/threonine-protei 94.4 0.19 6.6E-06 32.7 6.7 115 1-119 13-139 (339)
304 1cru_A Protein (soluble quinop 94.1 0.86 3E-05 31.0 13.6 34 32-65 26-59 (454)
305 3v9f_A Two-component system se 93.9 1.3 4.3E-05 32.2 16.1 114 32-153 449-566 (781)
306 3sov_A LRP-6, low-density lipo 93.2 1 3.5E-05 28.9 18.3 133 7-153 100-236 (318)
307 4a2l_A BT_4663, two-component 93.0 1.9 6.4E-05 31.4 17.0 117 32-153 309-434 (795)
308 4a0p_A LRP6, LRP-6, low-densit 93.0 1.8 6E-05 30.9 16.7 136 6-153 13-153 (628)
309 2xzh_A Clathrin heavy chain 1; 92.8 1.3 4.6E-05 29.0 14.0 133 7-149 179-326 (365)
310 1tl2_A L10, protein (tachylect 92.7 1 3.5E-05 27.7 7.2 64 84-153 45-114 (236)
311 3ii7_A Kelch-like protein 7; p 92.6 1.2 4E-05 28.1 12.9 101 43-153 149-270 (306)
312 4gq2_M Nucleoporin NUP120; bet 92.3 1.1 3.9E-05 33.5 8.4 37 33-69 236-272 (950)
313 2g8s_A Glucose/sorbosone dehyd 92.2 1.6 5.3E-05 28.5 13.6 31 32-62 17-47 (353)
314 4a0p_A LRP6, LRP-6, low-densit 92.1 2.3 7.9E-05 30.3 18.4 114 33-154 80-196 (628)
315 2vpj_A Kelch-like protein 12; 91.7 1.6 5.3E-05 27.4 13.3 103 43-153 159-276 (301)
316 3ei3_A DNA damage-binding prot 91.7 3.7 0.00013 31.7 15.5 139 5-151 901-1058(1158)
317 2xn4_A Kelch-like protein 2; s 91.6 1.6 5.5E-05 27.4 12.1 104 43-154 155-275 (302)
318 3das_A Putative oxidoreductase 91.6 1.9 6.6E-05 28.2 14.6 35 31-65 30-64 (347)
319 2be1_A Serine/threonine-protei 91.6 0.36 1.2E-05 31.5 4.7 108 45-153 11-128 (339)
320 3s94_A LRP-6, low-density lipo 91.5 2.7 9.4E-05 29.8 16.5 115 33-154 392-509 (619)
321 3sbq_A Nitrous-oxide reductase 91.0 2.2 7.4E-05 30.3 8.1 69 85-154 328-407 (638)
322 4fhn_B Nucleoporin NUP120; pro 90.9 0.93 3.2E-05 34.6 6.9 34 85-118 243-276 (1139)
323 1xi4_A Clathrin heavy chain; a 90.6 5.6 0.00019 31.8 10.8 139 7-154 124-288 (1630)
324 2zwa_A Leucine carboxyl methyl 90.4 3.8 0.00013 29.6 11.7 70 42-112 499-579 (695)
325 3a9g_A Putative uncharacterize 90.4 2.6 8.7E-05 27.6 12.5 64 33-98 73-153 (354)
326 1xi4_A Clathrin heavy chain; a 90.1 4.5 0.00016 32.2 9.7 76 32-111 105-189 (1630)
327 2vpj_A Kelch-like protein 12; 90.0 2.4 8.2E-05 26.6 14.8 103 43-153 112-229 (301)
328 3v9f_A Two-component system se 89.9 4.4 0.00015 29.5 16.8 114 32-153 362-476 (781)
329 3ei3_A DNA damage-binding prot 89.5 6.1 0.00021 30.6 17.3 112 34-153 515-634 (1158)
330 3ii7_A Kelch-like protein 7; p 89.0 2.9 0.0001 26.3 13.6 65 43-112 55-129 (306)
331 1bpo_A Protein (clathrin); cla 89.0 4.2 0.00014 28.0 16.8 133 7-149 178-325 (494)
332 2xn4_A Kelch-like protein 2; s 88.5 3.2 0.00011 26.0 12.5 103 43-153 108-227 (302)
333 2woz_A Kelch repeat and BTB do 87.8 3.7 0.00013 26.0 11.8 65 43-112 158-233 (318)
334 1zgk_A Kelch-like ECH-associat 87.6 3.8 0.00013 25.9 11.5 101 43-153 121-238 (308)
335 4asc_A Kelch repeat and BTB do 87.6 3.8 0.00013 25.9 12.9 95 43-145 148-253 (315)
336 2wg3_C Hedgehog-interacting pr 86.1 6.4 0.00022 27.0 13.6 31 32-62 13-44 (463)
337 3f7f_A Nucleoporin NUP120; nuc 85.1 1.2 4.1E-05 32.2 4.1 31 89-119 229-259 (729)
338 1cru_A Protein (soluble quinop 85.0 7.1 0.00024 26.6 8.8 59 83-142 30-98 (454)
339 2ism_A Putative oxidoreductase 84.6 6.4 0.00022 25.6 8.8 68 83-153 34-112 (352)
340 1zgk_A Kelch-like ECH-associat 84.3 5.8 0.0002 25.0 12.5 103 43-153 168-285 (308)
341 2woz_A Kelch repeat and BTB do 83.0 6.8 0.00023 24.8 10.4 103 43-153 109-229 (318)
342 2uvk_A YJHT; unknown function, 82.7 7.5 0.00026 25.0 12.8 54 43-100 65-128 (357)
343 4fhn_B Nucleoporin NUP120; pro 82.2 1.4 4.9E-05 33.7 3.8 37 34-70 239-275 (1139)
344 4asc_A Kelch repeat and BTB do 81.9 7.6 0.00026 24.5 11.8 101 43-153 98-219 (315)
345 2zwa_A Leucine carboxyl methyl 81.0 13 0.00046 26.8 12.8 107 43-153 451-575 (695)
346 3f7f_A Nucleoporin NUP120; nuc 78.3 5.6 0.00019 29.0 5.4 35 34-70 223-257 (729)
347 2xbg_A YCF48-like protein; pho 77.8 11 0.00038 24.1 14.9 111 30-148 160-272 (327)
348 2g8s_A Glucose/sorbosone dehyd 77.5 12 0.00042 24.3 11.7 15 84-98 134-148 (353)
349 3zwu_A Alkaline phosphatase PH 73.7 22 0.00075 25.4 8.5 57 84-142 480-548 (592)
350 1q47_A Semaphorin 3A; beta pro 73.5 9.1 0.00031 26.5 5.3 29 30-58 459-487 (495)
351 2xbg_A YCF48-like protein; pho 67.2 22 0.00074 22.8 16.8 115 31-152 203-319 (327)
352 3zwu_A Alkaline phosphatase PH 67.2 32 0.0011 24.6 8.3 58 36-97 479-548 (592)
353 3nvq_A Semaphorin-7A; beta-pro 66.8 8.6 0.00029 27.4 4.1 57 2-58 384-444 (590)
354 1olz_A Semaphorin 4D; developm 64.8 9.6 0.00033 27.5 4.2 56 2-58 419-477 (663)
355 4gz8_A Semaphorin-3A; multi-do 64.0 11 0.00036 27.4 4.2 29 30-58 467-495 (667)
356 3das_A Putative oxidoreductase 60.9 32 0.0011 22.6 10.3 51 83-133 35-89 (347)
357 3s25_A Hypothetical 7-bladed b 59.8 31 0.0011 22.0 11.5 61 39-109 59-137 (302)
358 3ol2_B Plexin-B1; beta-propell 58.9 31 0.001 24.3 5.7 56 2-58 404-461 (528)
359 3al9_A Plexin-A2; beta-propell 56.6 8 0.00027 27.1 2.6 57 2-58 417-476 (539)
360 3s25_A Hypothetical 7-bladed b 54.3 40 0.0014 21.5 10.7 65 38-111 150-217 (302)
361 4a9v_A PHOX; hydrolase, beta-p 46.9 78 0.0027 22.8 8.0 57 84-142 480-548 (592)
362 2uvk_A YJHT; unknown function, 43.8 62 0.0021 20.7 11.6 96 43-145 19-128 (357)
363 3oky_B Putative uncharacterize 39.3 1E+02 0.0035 22.1 5.8 27 32-58 469-495 (565)
364 3oky_A Plexin-A2; transmembran 35.0 77 0.0026 23.2 4.8 57 2-58 416-475 (681)
365 3mwp_A Nucleoprotein; structur 34.4 10 0.00035 25.9 0.4 19 96-114 162-180 (577)
366 1xks_A Nuclear pore complex pr 28.8 1.4E+02 0.005 20.5 11.2 55 4-62 114-171 (450)
367 3q6k_A 43.2 kDa salivary prote 25.7 1.5E+02 0.0053 19.8 14.2 106 33-143 220-342 (381)
368 3al9_A Plexin-A2; beta-propell 23.4 2E+02 0.0069 20.4 7.0 71 34-105 401-476 (539)
369 2wg3_C Hedgehog-interacting pr 23.1 1.9E+02 0.0064 19.9 10.8 17 84-100 143-159 (463)
370 1ukf_A Avirulence protein AVRP 22.8 94 0.0032 18.5 2.9 34 32-65 118-152 (188)
371 4a9v_A PHOX; hydrolase, beta-p 22.5 2.2E+02 0.0077 20.6 9.7 62 33-98 476-549 (592)
372 4hvt_A Ritya.17583.B, post-pro 21.4 84 0.0029 23.1 3.1 29 86-114 136-169 (711)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-31 Score=172.75 Aligned_cols=149 Identities=13% Similarity=0.123 Sum_probs=117.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||+|++||+.+++..........+|.+.|++++|+|++++|++++.|++|++||+++++....+. .+..
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~---~h~~-- 170 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR---AHAA-- 170 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSS--
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc---CcCC--
Confidence 57899999999999988764211112233899999999999999999999999999999999887665443 1222
Q ss_pred eEEEEEEcCCCc-EEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDS-CIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+..++|+|++. ++++++.|+.|++||+++++....+..+.......+++|+|.++.+|++|+.||+|++||+.
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 234678999875 78999999999999999999888876544444447899999778899999999999999973
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.98 E-value=5.4e-31 Score=169.18 Aligned_cols=141 Identities=16% Similarity=0.192 Sum_probs=119.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+++++. ...+.+|..+|.+++|+|++++|++++.|+.|++||+++.+....+. .+..
T Consensus 179 lasg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~-- 249 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS---GHAS-- 249 (321)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---CCSS--
T ss_pred EEEEcCCCeEEEEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---CCCC--
Confidence 57899999999999987763 34445899999999999999999999999999999998876554432 1222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++.+|++++.|+.|++||+++++++.++.+|...+ ..++|+| ++.+|++++.|+.|++||+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v--~~v~~s~-~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV--WGVKYNG-NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECT-TSSEEEEEETTCCEEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcE--EEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence 24467899999999999999999999999999999998776554 5789999 8899999999999999996
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=9.4e-31 Score=169.17 Aligned_cols=142 Identities=15% Similarity=0.194 Sum_probs=120.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||++++.. ...+.+|...|.+++|+|++++|++++.|++|++||+++.+....+.+.... .
T Consensus 199 l~sg~~d~~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~-~-- 271 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII-C-- 271 (340)
T ss_dssp EEEEETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-S--
T ss_pred EEEEeCCCcEEEEECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcc-c--
Confidence 47899999999999987663 3444589999999999999999999999999999999987665544433211 1
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
....++|+|++++|++|+.|+.|++||+.+++.+..+.+|...+ .+++|+| ++.+|++|+.|++|++||
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v--~~~~~s~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV--SCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcE--EEEEEcC-CCCEEEEEcCCccEEecC
Confidence 23467899999999999999999999999999999998876554 5789999 889999999999999997
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.98 E-value=1.5e-30 Score=168.56 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=115.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.|++|++||+++++. ...+.+|.+.|.+++|+|++. .|++++.|++|++||+++.+....+.... .+.
T Consensus 142 l~sgs~d~~i~iwd~~~~~~----~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~~- 215 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVV----LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA-PGY- 215 (344)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CC-
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecce-eec-
Confidence 57899999999999988763 444558999999999999874 78999999999999999887665443221 111
Q ss_pred EeEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++|+|+ ++++++|+.|+.|++||+++++++.++.+|...+ .+++|+|....+|++|+.|++|++||++
T Consensus 216 -~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v--~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 216 -LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV--TGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp -CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE--EEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred -cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE--EEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 2346789985 5688999999999999999999999999876655 5789999444689999999999999974
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=3.4e-30 Score=164.33 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=117.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||+|++||+.++.. ...+..|..+|.+++|+|++++|++++.|++|++||+.+++....+.. +..
T Consensus 28 l~s~~~dg~v~lWd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~---h~~-- 98 (304)
T 2ynn_A 28 VLTTLYSGRVELWNYETQVE----VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA---HPD-- 98 (304)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC---CSS--
T ss_pred EEEEcCCCcEEEEECCCCce----eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC---CCC--
Confidence 57899999999999987653 445558999999999999999999999999999999998876654432 222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCcc-ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR-SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++++|++++.|++|++||++++. ....+.+|...+ .+++|+|.++.+|++|+.|++|++||+
T Consensus 99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV--MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE--EEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE--EEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 23467899999999999999999999999874 445566655444 578999977789999999999999997
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=3.5e-30 Score=168.73 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=117.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCC--CCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQ--TGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~--~~~ 78 (154)
|++|+.|++|++||++.... ....+.+|.+.|.+++|+|++++|++++.|++|++||++++.....+..... ...
T Consensus 221 l~sgs~D~~v~~wd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSR---AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp EEEEETTSCEEEEETTTTCC---CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred EEEEECCCeEEEEECCCCCc---ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 57899999999999975432 1334458999999999999999999999999999999998876655432111 111
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEE----eCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATL----QSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
...+..++|+|+++++++|+.||.|++||+..++.+..+ .+|...+ .+++|+| ++.+|++|+.|++|++|+++
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v--~~l~~s~-dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI--SCLGLSS-DGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC--CEEEECS-SSSEEEEECTTSCEEEEECC
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce--EEEEECC-CCCEEEEeeCCCCEEEEecC
Confidence 111236789999999999999999999999998887776 3344333 5789999 88999999999999999974
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=4.3e-30 Score=166.94 Aligned_cols=142 Identities=18% Similarity=0.262 Sum_probs=119.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+++++. ...+.+|...|.+++|+|+++.|++++.|++|++||++.......+..... ..
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~---~~ 285 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI---IF 285 (354)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---CS
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc---cc
Confidence 57899999999999988763 344458999999999999999999999999999999988765544432211 11
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
....++|+|++.+|++++.|+.|++||+.+++.+..+.+|...+ .+++|+| ++.+|++|+.|++|++|+
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v--~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV--STLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE--EEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE--EEEEECC-CCCEEEEEcCCCCEEecC
Confidence 23467899999999999999999999999999998888776554 5789999 889999999999999996
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.1e-29 Score=162.01 Aligned_cols=143 Identities=18% Similarity=0.274 Sum_probs=116.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCce-eecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTK-VLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|++|++||++.+.. ... +.+|...|.+++|+| ++..|++++.|++|++||++............ ..
T Consensus 112 l~sgs~D~~v~lWd~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~--~~ 185 (304)
T 2ynn_A 112 VLSGSDDLTVKLWNWENNWA----LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ--ER 185 (304)
T ss_dssp EEEEETTSCEEEEEGGGTTE----EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCC--TT
T ss_pred EEEECCCCeEEEEECCCCcc----hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCC--cC
Confidence 57999999999999987642 333 348999999999999 67899999999999999998776554443221 12
Q ss_pred eEeEEEEEEcC--CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 79 WISSFRAIWGW--DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 79 ~~~~~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+. .+.|.| ++.+|++++.|+.|++||+++++++.++.+|...+ ..++|+| ++.+|++|+.||+|++||++
T Consensus 186 ~v~--~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v--~~~~~~p-~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 186 GVN--YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV--SFAVFHP-TLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp CEE--EEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE--EEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred cEE--EEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE--EEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence 233 335554 77899999999999999999999999999876554 5788999 77899999999999999973
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=8.6e-30 Score=168.37 Aligned_cols=141 Identities=21% Similarity=0.249 Sum_probs=120.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|++|++||+.+++. ...+.+|.+.|.+++|+|++++|++|+.|++|++||+.+.+....+. .+..
T Consensus 123 l~s~s~Dg~i~vwd~~~~~~----~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~---~h~~-- 193 (410)
T 1vyh_C 123 MVSASEDATIKVWDYETGDF----ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDH-- 193 (410)
T ss_dssp EEEEESSSCEEEEETTTCCC----CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC---CCSS--
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc---CCCC--
Confidence 57899999999999988764 44555899999999999999999999999999999998776543332 1222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++.++++++.|+.|++||+++++++..+.+|...+ ..+.++| ++.+|++|+.|+.|++||+
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~~~-~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV--RMVRPNQ-DGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE--EEEEECC-CCCEEEEEcCCCeEEEEEC
Confidence 24467899999999999999999999999999999998776554 5678998 8899999999999999997
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.6e-29 Score=163.39 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=117.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++++.|++|++||+++++. ...+.+|.+.|.+++|+|+++++++++.|+.|++||+++......+.. +..
T Consensus 157 l~s~s~d~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~---h~~-- 227 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQ----TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG---HES-- 227 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC---CSS--
T ss_pred EEEEECCCcEEEEECCCCcE----EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC---CcC--
Confidence 47899999999999988763 444558999999999999999999999999999999988765544421 122
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++.+|++++.|+.|++||+++++.+..+..+........++|+| ++.+|++|+.|+.|++||+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEc
Confidence 23467899999999999999999999999988877765332222336889999 8899999999999999996
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=162.30 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=120.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++|+++.++. ...+..|...|.+++|+|++++|++++.|+.|++||+++.+....+.. +...+
T Consensus 137 l~~g~~dg~v~i~~~~~~~~----~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~---h~~~v 209 (321)
T 3ow8_A 137 LATGTHVGKVNIFGVESGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG---HAMPI 209 (321)
T ss_dssp EEEECTTSEEEEEETTTCSE----EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSCC
T ss_pred EEEEcCCCcEEEEEcCCCce----eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc---cCCce
Confidence 57899999999999987764 445558889999999999999999999999999999998766544431 11222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..++|+|++++|++++.|+.|++||+++++.+..+.+|...+ ..++|+| ++.+|++++.|++|++||++
T Consensus 210 --~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v--~~~~~sp-~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 210 --RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV--LNVAFCP-DDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp --CEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred --eEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce--EEEEECC-CCCEEEEEeCCCcEEEEeCC
Confidence 357899999999999999999999999999998888776554 5789999 78999999999999999973
No 12
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.3e-29 Score=160.43 Aligned_cols=146 Identities=12% Similarity=0.057 Sum_probs=106.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecc---cCCeEEEEEcCCCCEE------------EEeeCCCeEEEEeccccc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSH---KRAVHSAYFSPSGSSL------------ATTSFDDTIGIWSGVNFE 65 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l------------~~~~~d~~v~~~~~~~~~ 65 (154)
|++|+.|++|+|||+.+++. ...+.+| ...+.+++|+|+|.++ ++|+.|+++++||..+++
T Consensus 196 LaSgS~D~TIkIWDl~TGk~----l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQL----LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred EEEecCCCcEEEEECCCCcE----EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 47899999999999998873 3333344 3478888999999876 567889999999998887
Q ss_pred cceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC
Q 038702 66 NTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
....+....+.++....+...+ ++.++++++.|++|+|||+.+++++.++.+|...+. ..++|+| ++++|++|+.|
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv-s~vafSP-DG~~LaSGS~D 347 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW-SFVKWSG-TDSHLLAGQKD 347 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC-CEEEECS-SSSEEEEECTT
T ss_pred EEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE-EEEEECC-CCCEEEEEECC
Confidence 6544321111121111222223 378899999999999999999999999988776655 4579999 88999999999
Q ss_pred CeEEEeeCC
Q 038702 146 GQVYVWTSD 154 (154)
Q Consensus 146 ~~i~~wd~~ 154 (154)
++|++||+.
T Consensus 348 ~TIklWd~~ 356 (356)
T 2w18_A 348 GNIFVYHYS 356 (356)
T ss_dssp SCEEEEEEC
T ss_pred CcEEEecCC
Confidence 999999963
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=4.8e-29 Score=159.98 Aligned_cols=141 Identities=21% Similarity=0.273 Sum_probs=116.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|++|++||+.+++. ...+.+|...|.+++|+|++++|++++.|++|++||++.........|.. .+
T Consensus 80 l~s~s~D~~v~~wd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~----~v 151 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGET----YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHND----WV 151 (319)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSS----CE
T ss_pred EEEEeCCCEEEEEECCCCCe----eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCC----cE
Confidence 57899999999999988764 45556999999999999999999999999999999997543333333322 23
Q ss_pred eEEEEEEcCC------CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWD------DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~------~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..+.+.|. +.++++++.|+.|++||+++.+....+.+|...+ ..++|+| ++.+|++++.||.|++||+.
T Consensus 152 --~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~sp-~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 152 --SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNI--NTLTASP-DGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp --EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCE--EEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred --EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcE--EEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 35567774 4589999999999999999998888888776554 5789999 88999999999999999973
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=5.6e-29 Score=164.49 Aligned_cols=142 Identities=18% Similarity=0.269 Sum_probs=118.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--------------------CCEEEEeeCCCeEEEEe
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--------------------GSSLATTSFDDTIGIWS 60 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~v~~~~ 60 (154)
|++|+.|++|++||+.+... ...+.+|...|.+++|+|+ +.+|++|+.|+.|++||
T Consensus 249 l~s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd 324 (410)
T 1vyh_C 249 IASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324 (410)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEE
Confidence 47899999999999987663 4445589999999999996 67899999999999999
Q ss_pred ccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEE
Q 038702 61 GVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLA 140 (154)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (154)
++++.....+.. +... +..++|+|++++|++++.|+.|++||+.+++++..+.+|...+ .+++|+| ++.+|+
T Consensus 325 ~~~~~~~~~~~~---h~~~--v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~-~~~~l~ 396 (410)
T 1vyh_C 325 VSTGMCLMTLVG---HDNW--VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV--TSLDFHK-TAPYVV 396 (410)
T ss_dssp TTTTEEEEEEEC---CSSC--EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE--EEEEECS-SSSCEE
T ss_pred CCCCceEEEEEC---CCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE--EEEEEcC-CCCEEE
Confidence 998776544431 2222 3367899999999999999999999999999999998776554 5789999 788999
Q ss_pred EEcCCCeEEEeeCC
Q 038702 141 GATGGGQVYVWTSD 154 (154)
Q Consensus 141 ~~~~d~~i~~wd~~ 154 (154)
+|+.|++|++||+.
T Consensus 397 sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 397 TGSVDQTVKVWECR 410 (410)
T ss_dssp EEETTSEEEEEC--
T ss_pred EEeCCCcEEEEeCC
Confidence 99999999999974
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.8e-28 Score=156.68 Aligned_cols=142 Identities=17% Similarity=0.244 Sum_probs=119.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++|++.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+.. +..
T Consensus 38 l~s~~~dg~i~iw~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~~~-- 108 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKF----EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG---HSN-- 108 (312)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSS--
T ss_pred EEEeeCCCeEEEEeCCCccc----chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC---CCC--
Confidence 57899999999999987653 344458999999999999999999999999999999998776554432 111
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+..+.|+|+++++++++.|+.|++||+++++.+..+..|...+ ..++|+| ++.+|++++.|+.|++||+.
T Consensus 109 ~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV--SAVHFNR-DGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE--EEEEEcC-CCCEEEEEeCCCcEEEEECC
Confidence 23467899999999999999999999999999988888665443 5789999 78999999999999999973
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=8e-29 Score=161.16 Aligned_cols=149 Identities=11% Similarity=0.104 Sum_probs=113.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++++.||+|++||+.+++..........+|.+.|.+++|+|++++|++++.|+.|++||+++++....+.. +..
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~---h~~-- 182 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA---HSS-- 182 (357)
T ss_dssp EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC---CSS--
T ss_pred EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC---CCC--
Confidence 467899999999999887643333334458999999999999999999999999999999998776654431 222
Q ss_pred eEEEEEEcCCCc-EEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDS-CIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+..++|+|++. ++++++.|+.|++||+++++....+..........+++|+|..+.+|++|+.|+.|++||+.
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 234678999875 78999999999999999998877766444444457899999667899999999999999973
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.2e-28 Score=162.10 Aligned_cols=141 Identities=19% Similarity=0.239 Sum_probs=116.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|++|++||+++.+....+.+..
T Consensus 138 l~s~~~d~~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~------ 207 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKI----VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED------ 207 (393)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------
T ss_pred EEEEcCCCeEEEEECCCCcE----EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC------
Confidence 57899999999999987653 34445899999999999999999999999999999999877665554322
Q ss_pred eEEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEe-------CCCcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 81 SSFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQ-------SPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
....++|+| +++++++++.|+.|++||+++++.+..+. +|.. .+ .+++|+| ++.+|++|+.|+.|++||
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v-~~v~~~~-~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SV-YSVVFTR-DGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CE-EEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC-CE-EEEEECC-CCCEEEEEeCCCEEEEEE
Confidence 234568898 89999999999999999999998877763 3332 22 6789999 889999999999999999
Q ss_pred CC
Q 038702 153 SD 154 (154)
Q Consensus 153 ~~ 154 (154)
++
T Consensus 285 ~~ 286 (393)
T 1erj_A 285 LQ 286 (393)
T ss_dssp C-
T ss_pred CC
Confidence 73
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=3.1e-28 Score=158.21 Aligned_cols=143 Identities=16% Similarity=0.160 Sum_probs=116.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC--CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP--SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|++|++||+++++. ...+.+|...|.+++|+| +++.|++++.|++|++||+++.+....+. .+..
T Consensus 169 l~t~s~D~~v~lwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~---~h~~ 241 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQL----LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE---THES 241 (354)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC---CCSS
T ss_pred EEEEeCCCcEEEEeCCCCeE----EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCC
Confidence 57899999999999988763 445558999999999988 56899999999999999999877654442 1222
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. +..++|+|++.+|++++.|++|++||++.++.+..+..+........++|+| ++.+|++|+.|+.|++||+
T Consensus 242 ~--v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 242 D--VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp C--EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred C--eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEEC
Confidence 2 3467899999999999999999999999888776665443333336789999 8899999999999999997
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.4e-28 Score=159.39 Aligned_cols=146 Identities=22% Similarity=0.332 Sum_probs=115.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+++++|++...... ....+.+|...|.+++|+|++++|++++.|++|++||++.............+...+
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFE--CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred EEEEECCCcEEEEEccCCCeE--EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 578999999999998765310 023344899999999999999999999999999999998765443333222233333
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCcc--ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR--SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..++|+|++.+|++++.|+.|++||.++++ +...+.+|...+ .+++|+| ++++|++++.|++|++||.
T Consensus 154 --~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v--~~l~~sp-~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 154 --KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTV--WSLAFDP-SGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp --EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred --EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCce--EEEEECC-CCCEEEEEeCCCeEEEecc
Confidence 467899999999999999999999998765 345676665444 6889999 8899999999999999984
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=4.8e-28 Score=154.64 Aligned_cols=143 Identities=18% Similarity=0.243 Sum_probs=119.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+.. +...
T Consensus 80 l~s~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~- 151 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKC----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA---HSDP- 151 (312)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC---CSSC-
T ss_pred EEEECCCCEEEEEECCCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC---CCCc-
Confidence 57899999999999987763 445558999999999999999999999999999999998766544432 1222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
...++|+|+++++++++.|+.|++||+++++.+..+..++...+ ..++|+| ++++|++++.|+.|++||+.
T Consensus 152 -v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 152 -VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV-SFVKFSP-NGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp -EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCE-EEEEECT-TSSEEEEEETTTEEEEEETT
T ss_pred -EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCce-EEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence 34678999999999999999999999999988887765444444 6789999 88999999999999999973
No 21
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.3e-28 Score=160.54 Aligned_cols=143 Identities=12% Similarity=0.092 Sum_probs=106.0
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeE-----------
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMI----------- 70 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~----------- 70 (154)
++++.|++|++||+++.+ ......|...|.+++|+|+|+++++++.++ +.+|+..+.+.....
T Consensus 151 as~~~d~~i~iwd~~~~~-----~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLT-----EKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EESCSSCEEEEEETTTTE-----EEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EECCCCCEEEEeECCCCc-----EEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEE
Confidence 456789999999998766 444557888999999999999999998665 445544432211000
Q ss_pred --ee-----------cCC-----------------------CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccce
Q 038702 71 --HH-----------NNQ-----------------------TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV 114 (154)
Q Consensus 71 --~~-----------~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 114 (154)
.. ... .++...+.+++|+|++++|++|+.|+.|+|||+++++++
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 00 000 000011335789999999999999999999999999999
Q ss_pred eEE-eCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 115 ATL-QSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 115 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+ .+|...+ .+++|+| ++++|++|+.|++|+|||+
T Consensus 305 ~~~~~gH~~~V--~~v~fSp-dg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 305 KIFKQAHSFAI--TEVTISP-DSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEETTSSSSCE--EEEEECT-TSCEEEEEETTSEEEEEEC
T ss_pred EEecCcccCCE--EEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 886 4554443 6899999 8999999999999999997
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=1.8e-28 Score=168.98 Aligned_cols=145 Identities=23% Similarity=0.325 Sum_probs=115.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec----CCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN----NQT 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~----~~~ 76 (154)
|++|+.|++|++||....+. ...+.+|...|.+++|+|++++|++++.|++|++||+.+++....+... ..+
T Consensus 163 l~s~s~D~~v~lwd~~~~~~----~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKF----KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAH 238 (611)
T ss_dssp EEEEETTSCEEEEETTTBEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSS
T ss_pred EEEEeCCCeEEEEECCCCeE----eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccccccc
Confidence 57899999999999876542 3344589999999999999999999999999999999887665444210 012
Q ss_pred CceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEe--------------------------------------
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQ-------------------------------------- 118 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------------------------------------- 118 (154)
.. .+..++|+|++++|++++.|++|++||+++++.+.++.
T Consensus 239 ~~--~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 239 SG--SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp SS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred CC--CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCc
Confidence 22 34577999999999999999999999999877655443
Q ss_pred -----CCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 119 -----SPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 119 -----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+|.. . ..+++|+| ++++|++++.|++|++||++
T Consensus 317 ~~~~~gh~~-~-v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 317 DQVRYGHNK-A-ITALSSSA-DGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEEECCCSS-C-EEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred ceEEcCCCC-C-EEEEEEeC-CCCEEEEEeCCCcEEEEECC
Confidence 2322 2 26789999 88999999999999999973
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=4.8e-28 Score=156.66 Aligned_cols=142 Identities=16% Similarity=0.227 Sum_probs=112.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.|++|++||+++++. ...+.+|...|.+++|+|++++|++++.|++|++||+....... ......+...+
T Consensus 91 l~s~s~D~~v~lwd~~~~~~----~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~v 165 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTT----YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS-SAEKENHSDWV 165 (343)
T ss_dssp EEEEETTSEEEEEETTSSCE----EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE-CCTTTSCSSCE
T ss_pred EEEEcCCCcEEEEECCCCcE----EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee-eecccCCCcee
Confidence 47899999999999988763 44556999999999999999999999999999999997432211 11111222233
Q ss_pred eEEEEEEcCCC----------cEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEE
Q 038702 81 SSFRAIWGWDD----------SCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYV 150 (154)
Q Consensus 81 ~~~~~~~~~~~----------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 150 (154)
..++|+|++ .++++++.|+.|++||. ..+....+.+|...+ ..++|+| ++.+|++|+.|+.|++
T Consensus 166 --~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v--~~~~~s~-~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 166 --SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNV--NHLSISP-NGKYIATGGKDKKLLI 239 (343)
T ss_dssp --EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCE--EEEEECT-TSSEEEEEETTCEEEE
T ss_pred --eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccc--eEEEECC-CCCEEEEEcCCCeEEE
Confidence 356788876 78999999999999994 456666777665544 5789999 8899999999999999
Q ss_pred eeC
Q 038702 151 WTS 153 (154)
Q Consensus 151 wd~ 153 (154)
||+
T Consensus 240 wd~ 242 (343)
T 2xzm_R 240 WDI 242 (343)
T ss_dssp EES
T ss_pred EEC
Confidence 997
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-28 Score=157.35 Aligned_cols=149 Identities=21% Similarity=0.237 Sum_probs=106.9
Q ss_pred CeeecCCCcEEEEEccCCCCC--CCCCc-eeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccc-cceeEeecCCC
Q 038702 1 MATSSTDGTACIWDLRSMATD--KPEPT-KVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFE-NTAMIHHNNQT 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~--~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~-~~~~~~~~~~~ 76 (154)
|++|+.|++|++||+...... ..... .+.+|...|.+++|+|++++|++++.|++|++||++... ..........+
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h 152 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH 152 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC
Confidence 578999999999998643211 11122 334899999999999999999999999999999995432 22222222222
Q ss_pred CceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCc--cceeEEeCCCcCCcceEEEecCCC-ccEEEEEcCCCeEEEeeC
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQR--RSVATLQSPYISAIPCRFHAHPHQ-VGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~wd~ 153 (154)
... +..++|+|++.+|++++.|++|++||..++ +++..+.+|...+ ..++|+|.. +.+|++++.|++|++||+
T Consensus 153 ~~~--v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 153 SQD--VKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV--WSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp SSC--EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE--EEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred CCc--eEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcE--EEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 223 346789999999999999999999998765 6777888776554 578899832 568999999999999986
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=158.26 Aligned_cols=145 Identities=21% Similarity=0.287 Sum_probs=107.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCce-e-ec-ccCCeEEEEEcCCCCEEEEeeCCCeEEEEecccccc----ceeEeec
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTK-V-LS-HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFEN----TAMIHHN 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~-~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~----~~~~~~~ 73 (154)
|++|+.|++|++||+..+... ... + .+ |...|.+++|+|++++|++++.|++|++||++.... .......
T Consensus 27 las~~~D~~i~lw~~~~~~~~---~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 103 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFT---LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII 103 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCE---EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE
T ss_pred EEEEcCCCEEEEEEecCCCeE---EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE
Confidence 589999999999999764321 222 2 23 999999999999999999999999999999864321 1111111
Q ss_pred CCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCc----cceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 74 NQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQR----RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
..+.. .+..++|+|++++|++++.|++|++||++.. +++..+.+|...+ ..++|+| ++.+|++++.|++|+
T Consensus 104 ~~h~~--~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v--~~v~~~p-~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 104 EGHEN--EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV--KHVIWHP-SEALLASSSYDDTVR 178 (330)
T ss_dssp C------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE--EEEEECS-SSSEEEEEETTSCEE
T ss_pred cCCCC--cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce--EEEEECC-CCCEEEEEcCCCeEE
Confidence 12222 3446789999999999999999999999532 4556676665444 5789999 789999999999999
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
+||+
T Consensus 179 iW~~ 182 (330)
T 2hes_X 179 IWKD 182 (330)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9985
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=1.6e-28 Score=159.69 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=117.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.|+.|++||+++++. ...+.+|...|.+++|+|++. .+++++.|++|++||+++++.......... .
T Consensus 154 l~sgs~dg~v~iwd~~~~~~----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~-- 226 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAV----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS-D-- 226 (357)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC-C--
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccc-c--
Confidence 57899999999999988763 444558999999999999875 789999999999999998776554432211 1
Q ss_pred EeEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.....++|+|+ +.+|++|+.|+.|++||+++++.+..+.++...+ ..++|+|..+.+|++|+.|++|++||++
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v--~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI--TGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE--EEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE--EEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 12346789997 4688999999999999999999999998776554 5789999555789999999999999974
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.2e-27 Score=152.09 Aligned_cols=147 Identities=18% Similarity=0.196 Sum_probs=111.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|++|++||++++... ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.......... ..+..
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~ 146 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAI 146 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBC--CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSS
T ss_pred EEEEcCCCEEEEEEcCCCceE--EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccC
Confidence 579999999999999875321 13344579999999999997 88999999999999999987642211111 11111
Q ss_pred eEeEEEEEEcCC-------------CcEEEEEccCCeEEEecCCCcc----ceeEEeCCCcCCcceEEEecCCC--ccEE
Q 038702 79 WISSFRAIWGWD-------------DSCIFIGNMTRTVEVISPAQRR----SVATLQSPYISAIPCRFHAHPHQ--VGTL 139 (154)
Q Consensus 79 ~~~~~~~~~~~~-------------~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~l 139 (154)
.+..++|+|+ +++|++++.|+.|++||+++++ ....+.+|...+ .+++|+|.. +.+|
T Consensus 147 --~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V--~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 147 --GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV--RDVAWSPTVLLRSYM 222 (297)
T ss_dssp --CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE--EEEEECCCCSSSEEE
T ss_pred --ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce--EEEEECCCCCCceEE
Confidence 2346789986 5799999999999999998765 456677665544 578999932 5899
Q ss_pred EEEcCCCeEEEeeCC
Q 038702 140 AGATGGGQVYVWTSD 154 (154)
Q Consensus 140 ~~~~~d~~i~~wd~~ 154 (154)
++++.|++|++||++
T Consensus 223 as~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQD 237 (297)
T ss_dssp EEEETTSCEEEEEES
T ss_pred EEEECCCcEEEEEeC
Confidence 999999999999863
No 28
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-28 Score=167.16 Aligned_cols=142 Identities=11% Similarity=0.101 Sum_probs=116.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCc-eeecccCCeEEE--EEcCCC-CEEEEeeCCCeEEEEeccccccceeEe-ecCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPT-KVLSHKRAVHSA--YFSPSG-SSLATTSFDDTIGIWSGVNFENTAMIH-HNNQ 75 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~-~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~ 75 (154)
|++|+.||+|++||++++.. +. .+.+|...|.++ .|+|++ ++|++++.|++|++||+++.+....+. +...
T Consensus 280 lasgs~DgtV~lWD~~~~~~----~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV----PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS----CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred EEEEeCCCEEEEEECCCCCC----ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 58999999999999987543 33 355899999999 578887 899999999999999999877654432 3221
Q ss_pred CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 76 TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. .+..++|+|+++.+++++.|++|++||++++.++.++.+|...+ .+++|+| ++.+|++|+.|++|++||+
T Consensus 356 ~----~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V--~sva~Sp-~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 356 S----NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI--TAIGVSR-LHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp C----SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE--EEEECCS-SCCBCEEEETTTEEECCBS
T ss_pred C----cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce--EEEEeCC-CCCeEEEEECCCEEEEEec
Confidence 0 12356899999999999999999999999999888888776554 5889999 7889999999999999996
No 29
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1e-28 Score=164.31 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=113.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
||+|+.||.|+|||+...+.. ......+|.+.|++++|+| ++++|++++.|++|++||+++.......... ...
T Consensus 135 lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~-- 209 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD-TIN-- 209 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS-SCS--
T ss_pred EEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC-CCC--
Confidence 578999999999999876531 1223448999999999998 7899999999999999999865443333221 111
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.....++|+|++.+|++|+.||.|++||++. +.+..+.+|...+ .+++|+|....+|++++.|+.|++||+.
T Consensus 210 ~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v--~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 210 IWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKV--THVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp CCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCE--EEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred ccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceE--EeeeecCCCceEEEEecCcceeeEEecc
Confidence 2233568999999999999999999999864 5566777665544 5789999656689999999999999973
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.8e-27 Score=157.11 Aligned_cols=148 Identities=15% Similarity=0.275 Sum_probs=119.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+.........+
T Consensus 154 l~s~s~d~~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 154 LISSSQDMQLKIWSVKDGSN----PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp EEEEETTSEEEEEETTTCCC----CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred EEEEeCCCeEEEEeCCCCcC----ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 57899999999999988764 55556899999999999999999999999999999999887665554222222222
Q ss_pred eEE-------------------EEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEE
Q 038702 81 SSF-------------------RAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLA 140 (154)
Q Consensus 81 ~~~-------------------~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 140 (154)
..+ .++|+|+++++++++.||.|++||+++++.+..+...+...+ .+++|+| ++. +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~-~~~~~l~ 307 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC-NSLTVDG-NNANYIY 307 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE-EEEEECS-SCTTEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc-eeEEEeC-CCCCEEE
Confidence 221 235789999999999999999999999988888765444444 7899999 555 999
Q ss_pred EEcCCCeEEEeeCC
Q 038702 141 GATGGGQVYVWTSD 154 (154)
Q Consensus 141 ~~~~d~~i~~wd~~ 154 (154)
+|+.||.|++||+.
T Consensus 308 ~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 308 AGYENGMLAQWDLR 321 (420)
T ss_dssp EEETTSEEEEEETT
T ss_pred EEeCCCeEEEEEcC
Confidence 99999999999973
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=5.4e-28 Score=156.59 Aligned_cols=145 Identities=21% Similarity=0.234 Sum_probs=111.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee-ecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV-LSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.|++|++||+....... .... .+|...|.+++|+|++++|++++.|+++++|++.......... ...+...
T Consensus 31 las~~~D~~i~iw~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~-~~~h~~~ 107 (345)
T 3fm0_A 31 LASCGGDRRIRIWGTEGDSWIC--KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT-LEGHENE 107 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEE--EEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE-ECCCSSC
T ss_pred EEEEcCCCeEEEEEcCCCccee--eeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE-ccCCCCC
Confidence 5789999999999997654200 1112 3799999999999999999999999999999987654322111 1112222
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCcc---ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR---SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+..++|+|++++|++++.|+.|++||+++++ .+..+.+|...+ ..++|+| ++.+|++++.|+.|++||+
T Consensus 108 --v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v--~~~~~~p-~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 108 --VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV--KHVVWHP-SQELLASASYDDTVKLYRE 179 (345)
T ss_dssp --EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE--EEEEECS-SSSCEEEEETTSCEEEEEE
T ss_pred --ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe--EEEEECC-CCCEEEEEeCCCcEEEEEe
Confidence 3467899999999999999999999998764 345555554443 5789999 7899999999999999985
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=1.8e-27 Score=152.64 Aligned_cols=141 Identities=14% Similarity=0.253 Sum_probs=114.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++++.|+.|++||++..+. ...+.+|...|.+++|+|++++|++++.|+.|++||+++.+....+....
T Consensus 169 l~s~~~d~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------ 238 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQI----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD------ 238 (319)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS------
T ss_pred EEEEeCCCEEEEEECCcchh----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC------
Confidence 47899999999999987653 44455999999999999999999999999999999999887665554322
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc------CCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI------SAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....++|+|++.++++++. +.+++|++.....+..+..+.. .....+++|+| ++++|++|+.|+.|++||+
T Consensus 239 ~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA-DGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp CEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC-CCCEEEEeecCceEEEEEE
Confidence 2457799999999988775 4699999998777766653311 12236789999 8899999999999999996
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=1.3e-27 Score=157.24 Aligned_cols=145 Identities=20% Similarity=0.261 Sum_probs=111.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee-------ecccCCeEEEEEcCCCCEEEEeeCCCeEEEEecccccccee----
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV-------LSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAM---- 69 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~---- 69 (154)
|++|+.|+.|++||++++.. ...+ .+|...|.+++|+|++++|++++.|+.|++||+++......
T Consensus 222 l~~~s~d~~v~iwd~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFL----VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred EEEEcCCCcEEEEECCCCcE----EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 57899999999999987642 1111 47999999999999999999999999999999986533211
Q ss_pred -----EeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCC-----CccEE
Q 038702 70 -----IHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPH-----QVGTL 139 (154)
Q Consensus 70 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l 139 (154)
......+.. .+..++|+|++.+|++++.|+.|++||.++++.+..+.+|...+. .++++|. ++++|
T Consensus 298 ~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~--~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 298 NSGTCEVTYIGHKD--FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI--SVAVANGSSLGPEYNVF 373 (393)
T ss_dssp ---CEEEEEECCSS--CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE--EEEECSSCTTCTTCEEE
T ss_pred CCCcceEEEecccC--cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEE--EEEecCCcCcCCCCCEE
Confidence 001111122 244678999999999999999999999999999999998876654 5666541 57899
Q ss_pred EEEcCCCeEEEeeC
Q 038702 140 AGATGGGQVYVWTS 153 (154)
Q Consensus 140 ~~~~~d~~i~~wd~ 153 (154)
++|+.||+|++|++
T Consensus 374 ~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 374 ATGSGDCKARIWKY 387 (393)
T ss_dssp EEEETTSEEEEEEE
T ss_pred EEECCCCcEEECcc
Confidence 99999999999996
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1e-27 Score=167.31 Aligned_cols=145 Identities=19% Similarity=0.285 Sum_probs=118.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|++|++||+.++.. ...+.+|...|.+++|+|++++|++++.|++|++||...............+...+
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred EEEEeCCCcEEEEECCCCcc----eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 57899999999999988763 44556999999999999999999999999999999986543333222222233333
Q ss_pred eEEEEEEcCCC--cEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDD--SCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+++|+|++ ..+++++.|+.|++||+++++....+.+|...+ .+++|+| ++.+|++|+.||.|++||+.
T Consensus 521 --~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v--~~v~~sp-dg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 521 --SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV--STVAVSP-DGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp --EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSBCEEEETT
T ss_pred --EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEeC-CCCEEEEEeCCCeEEEEECC
Confidence 466899986 589999999999999999999988888776544 5789999 88999999999999999973
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=2.2e-27 Score=162.23 Aligned_cols=137 Identities=23% Similarity=0.329 Sum_probs=111.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++++.|+.|++||... +. ...+.+|...|.+++|+|++++|++++.|+.|++||...........|..
T Consensus 441 l~~~~~d~~v~~w~~~~-~~----~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~------ 509 (577)
T 2ymu_A 441 IASASDDKTVKLWNRNG-QL----LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS------ 509 (577)
T ss_dssp EEEEETTSEEEEEETTS-CE----EEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSS------
T ss_pred EEEEcCCCEEEEEECCC-CE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCC------
Confidence 47899999999999743 21 44556999999999999999999999999999999964332222222322
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
.+..++|+|++++|++++.|+.|++||. +++.+..+.+|...+ ..++|+| ++++|++++.|++|++||
T Consensus 510 ~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v--~~~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 510 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV--WGVAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE--EEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred CEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCE--EEEEEcC-CCCEEEEEeCCCEEEEeC
Confidence 2346789999999999999999999995 678888998876554 5789999 889999999999999998
No 36
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=2.7e-27 Score=155.06 Aligned_cols=142 Identities=17% Similarity=0.172 Sum_probs=113.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee-----ecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccc-cceeE-ee
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV-----LSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFE-NTAMI-HH 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~-~~~~~-~~ 72 (154)
|++|+.|++|++||+.+++. ...+ .+|...|.+++|++ ++++|++|+.|++|++||++... ....+ .|
T Consensus 173 l~s~s~D~~i~~wd~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQR----ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp EEEECTTSCEEEECTTTCCE----EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred EEEECCCCcEEEEEcCCCcE----EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 57899999999999988653 2222 37899999999987 88999999999999999998543 33222 23
Q ss_pred cCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcC-----CcceEEEecCCCccEEEEEcCCCe
Q 038702 73 NNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYIS-----AIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
.. .+ ..++|+|++++|++++.|++|++||+++++.+..+..+... .....++|+| ++.+|++|+.||.
T Consensus 249 ~~----~v--~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 249 EG----DI--NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGD 321 (380)
T ss_dssp SS----CC--CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSC
T ss_pred CC----Ce--EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCC
Confidence 22 23 36789999999999999999999999999988877643221 1236789999 8899999999999
Q ss_pred EEEeeC
Q 038702 148 VYVWTS 153 (154)
Q Consensus 148 i~~wd~ 153 (154)
|++||+
T Consensus 322 i~vwd~ 327 (380)
T 3iz6_a 322 CYVWDT 327 (380)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999996
No 37
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=8.9e-27 Score=148.10 Aligned_cols=146 Identities=17% Similarity=0.235 Sum_probs=109.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC--CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP--SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|++|++||+...... ....+.+|.++|.+++|+| ++++|++++.|++|++||+++++........ .+..
T Consensus 24 las~s~D~~v~iw~~~~~~~~--~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~-~h~~ 100 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHK--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA-VHSA 100 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBC--CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC-CCSS
T ss_pred EEEEeCCCEEEEEecCCCCcE--EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee-cCCC
Confidence 589999999999999753211 1344559999999999986 4899999999999999999876432221111 1222
Q ss_pred eEeEEEEEEcCC--CcEEEEEccCCeEEEecCCCccc--eeEEeCCCcCCcceEEEecCCC------------ccEEEEE
Q 038702 79 WISSFRAIWGWD--DSCIFIGNMTRTVEVISPAQRRS--VATLQSPYISAIPCRFHAHPHQ------------VGTLAGA 142 (154)
Q Consensus 79 ~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~ 142 (154)
. +..++|+|+ +.+|++++.|+.|++||++++.. ...+.+|...+ ..++|+|.. +.+|++|
T Consensus 101 ~--v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v--~~~~~~p~~~~~~~~~~~~~~~~~l~sg 176 (297)
T 2pm7_B 101 S--VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV--NSASWAPATIEEDGEHNGTKESRKFVTG 176 (297)
T ss_dssp C--EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE--EEEEECCCC------------CCEEEEE
T ss_pred c--eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc--ceEeecCCcccccccCCCCCCcceEEEE
Confidence 2 346789997 88999999999999999987642 34555555444 578888831 4689999
Q ss_pred cCCCeEEEeeC
Q 038702 143 TGGGQVYVWTS 153 (154)
Q Consensus 143 ~~d~~i~~wd~ 153 (154)
+.|++|++||+
T Consensus 177 s~D~~v~lwd~ 187 (297)
T 2pm7_B 177 GADNLVKIWKY 187 (297)
T ss_dssp ETTSCEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 99999999986
No 38
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=6.6e-27 Score=154.06 Aligned_cols=149 Identities=17% Similarity=0.250 Sum_probs=118.5
Q ss_pred CeeecCCCcEEEEEccCCCCCC---CCCceeecccCCeEEEEEcCCC-CEEEEeeCCCeEEEEeccccccceeEeecCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDK---PEPTKVLSHKRAVHSAYFSPSG-SSLATTSFDDTIGIWSGVNFENTAMIHHNNQT 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~ 76 (154)
|++|+.||.|++||+..+.... .....+.+|...|.+++|+|++ +.|++++.|+.|++||+++.+....+.. ..+
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~ 175 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DVH 175 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TTC
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CCC
Confidence 5789999999999998763211 1134455899999999999998 6999999999999999998766554420 112
Q ss_pred CceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEE-eCCCcCCcceEEEecCCCccEEEEE---cCCCeEEEee
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATL-QSPYISAIPCRFHAHPHQVGTLAGA---TGGGQVYVWT 152 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~---~~d~~i~~wd 152 (154)
.. .+..++|+|++.+|++++.|+.|++||+++++.+..+ ..|... ....+.|+| ++.+|++| +.|+.|++||
T Consensus 176 ~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 176 PD--TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-RPVHAVFVS-EGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp CS--CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-SCCEEEECS-TTEEEEEEECTTCCEEEEEEE
T ss_pred CC--ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-cceEEEEcC-CCcEEEEeccCCCCceEEEEc
Confidence 22 3446789999999999999999999999999998888 455443 236789999 78899999 7999999999
Q ss_pred CC
Q 038702 153 SD 154 (154)
Q Consensus 153 ~~ 154 (154)
+.
T Consensus 252 ~~ 253 (402)
T 2aq5_A 252 TK 253 (402)
T ss_dssp TT
T ss_pred Cc
Confidence 73
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.3e-27 Score=151.39 Aligned_cols=139 Identities=14% Similarity=0.138 Sum_probs=112.1
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
++++.|+.|++||+++.+. ...+.+|.+.|.+++|+|++++|++++.|+.|++||+++.+....+.... .
T Consensus 189 ~s~~~d~~i~i~d~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~------~ 258 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKL----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD------I 258 (340)
T ss_dssp EEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS------C
T ss_pred EEEcCCCEEEEEECCCCce----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc------e
Confidence 6789999999999988763 44455899999999999999999999999999999999887766554432 2
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC--------CcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP--------YISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
...+.|+|++.+ ++++.|+.|++||++++..+..+..+ +... ..+++|+| ++++|++|+.||.|++||+
T Consensus 259 v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~s~-dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 259 INALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ-CTSLAWSA-DGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp EEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCC-EEEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred EEeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC-EEEEEECC-CCCEEEEEeCCCEEEEEeC
Confidence 335678987755 56667999999999988776665431 2222 36789999 8899999999999999997
No 40
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=7.8e-27 Score=153.71 Aligned_cols=145 Identities=13% Similarity=0.093 Sum_probs=114.7
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEecccccc-------ceeEeec
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFEN-------TAMIHHN 73 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~-------~~~~~~~ 73 (154)
++++.||.|++|++............+.+|.+.|.+++|+| ++++|++++.|+.|++||+.+... ...+.
T Consensus 51 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-- 128 (402)
T 2aq5_A 51 CEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-- 128 (402)
T ss_dssp BCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE--
T ss_pred EEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec--
Confidence 45789999999999664322111334458999999999999 999999999999999999988732 22222
Q ss_pred CCCCceEeEEEEEEcCCC-cEEEEEccCCeEEEecCCCccceeEE--eCCCcCCcceEEEecCCCccEEEEEcCCCeEEE
Q 038702 74 NQTGRWISSFRAIWGWDD-SCIFIGNMTRTVEVISPAQRRSVATL--QSPYISAIPCRFHAHPHQVGTLAGATGGGQVYV 150 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 150 (154)
.+.. .+..++|+|++ .+|++++.|+.|++||+++++.+..+ ..|...+ .+++|+| ++.+|++++.|+.|++
T Consensus 129 -~h~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 129 -GHTK--RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI--YSVDWSR-DGALICTSCRDKRVRV 202 (402)
T ss_dssp -CCSS--CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE--EEEEECT-TSSCEEEEETTSEEEE
T ss_pred -CCCC--eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce--EEEEECC-CCCEEEEEecCCcEEE
Confidence 1222 24467899998 69999999999999999999998888 5444333 6889999 8899999999999999
Q ss_pred eeCC
Q 038702 151 WTSD 154 (154)
Q Consensus 151 wd~~ 154 (154)
||++
T Consensus 203 wd~~ 206 (402)
T 2aq5_A 203 IEPR 206 (402)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9973
No 41
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2.1e-26 Score=148.97 Aligned_cols=144 Identities=15% Similarity=0.194 Sum_probs=109.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCC--C-CceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEe-ecCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKP--E-PTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIH-HNNQT 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~ 76 (154)
|++|+.|++|++||+...+.... . ...+.+|...|.+++|+|++.++++++.|++|++||+++++....+. |..
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-- 119 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-- 119 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS--
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC--
Confidence 58999999999999976432110 0 12344899999999999999999999999999999999877654443 322
Q ss_pred CceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEe---CCCcCCcceEEEecCCC---------ccEEEEEcC
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQ---SPYISAIPCRFHAHPHQ---------VGTLAGATG 144 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~l~~~~~ 144 (154)
.+..++|+|++++|++++.|+.|++||+... ...... .|.. . ...++|+|.. +.+|++++.
T Consensus 120 ----~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~-~-v~~~~~~~~~~~~~~~~~~~~~l~s~~~ 192 (343)
T 2xzm_R 120 ----EVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSD-W-VSCVRYSPIMKSANKVQPFAPYFASVGW 192 (343)
T ss_dssp ----CEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSS-C-EEEEEECCCCCSCSCCCSSCCEEEEEET
T ss_pred ----cEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCc-e-eeeeeeccccccccccCCCCCEEEEEcC
Confidence 2446789999999999999999999999743 222222 2222 2 3578888832 268999999
Q ss_pred CCeEEEeeC
Q 038702 145 GGQVYVWTS 153 (154)
Q Consensus 145 d~~i~~wd~ 153 (154)
|+.|++||.
T Consensus 193 d~~i~iwd~ 201 (343)
T 2xzm_R 193 DGRLKVWNT 201 (343)
T ss_dssp TSEEEEEET
T ss_pred CCEEEEEcC
Confidence 999999985
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.4e-27 Score=155.89 Aligned_cols=145 Identities=16% Similarity=0.200 Sum_probs=106.7
Q ss_pred CeeecCCCcEEEEEccCC--CCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSM--ATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|+.|++||+.++ .. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+.+..........+..
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~ 101 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKH----ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR 101 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEE----CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSS
T ss_pred EEEecCCCEEEEEEccCCceEE----EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC
Confidence 578899999999999876 32 334458999999999999999999999999999999998761111111111222
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCCcc---ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR---SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++++|++++.|+.|++||+++++ ....+...+...+ .+++|+| ++.+|++++.|+.|++||+
T Consensus 102 --~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v-~~~~~~~-~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 102 --AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTI-LSLDWHP-NNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp --CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCE-EEEEECT-TSSEEEEEESSSCEEEEEE
T ss_pred --ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCe-EEEEEcC-CCCEEEEEeCCCEEEEEEE
Confidence 24467899999999999999999999999877 4677776233333 6899999 8899999999999999996
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3.5e-27 Score=155.78 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=116.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee-ecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV-LSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.|+.|++||+..+. .... .+|.+.|.+++|+|++++|++++.|+.|++||+++.+....+.. +..
T Consensus 112 l~~~~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---h~~- 182 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNL-----QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG---HRA- 182 (420)
T ss_dssp EEEEETTSCEEEECTTSCE-----EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC---CSS-
T ss_pred EEEEECCCCEEEEeCCCcc-----eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC---CCC-
Confidence 5789999999999998665 3444 38999999999999999999999999999999998877655531 112
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc---C-------------------CcceEEEecCCCcc
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI---S-------------------AIPCRFHAHPHQVG 137 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~~~~~~~ 137 (154)
.+..++|+|++++|++++.|+.|++||+++++.+..+..+.. . .....++|+| ++.
T Consensus 183 -~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~ 260 (420)
T 3vl1_A 183 -TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGK 260 (420)
T ss_dssp -CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTE
T ss_pred -cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCC
Confidence 244678999999999999999999999999998888875321 1 1113456778 788
Q ss_pred EEEEEcCCCeEEEeeCC
Q 038702 138 TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 138 ~l~~~~~d~~i~~wd~~ 154 (154)
+|++++.||.|++||+.
T Consensus 261 ~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEcCCCeEEEEECC
Confidence 99999999999999973
No 44
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.6e-26 Score=156.68 Aligned_cols=150 Identities=12% Similarity=0.106 Sum_probs=113.2
Q ss_pred CeeecCCCcEEEEEccCCCCC------CCCC-ceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec
Q 038702 1 MATSSTDGTACIWDLRSMATD------KPEP-TKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~------~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~ 73 (154)
||+|+.||+|++||+...... ...+ ..+.+|...|++++|+|+ ..|++|+.||+|++||+++...+.....
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~- 305 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQ- 305 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEE-
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEee-
Confidence 578999999999999765421 0011 234489999999999986 4899999999999999997644322111
Q ss_pred CCCCceEeEEEEEEcCCC-cEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 74 NQTGRWISSFRAIWGWDD-SCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
.+...+..+...|+|++ .+|++++.|++|++||+++++++..+.++.......+++|+| ++..+++++.|++|++||
T Consensus 306 -~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd 383 (524)
T 2j04_B 306 -VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVP 383 (524)
T ss_dssp -CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEE
T ss_pred -cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEE
Confidence 12233444433678887 899999999999999999998887776654322225689999 778899999999999999
Q ss_pred CC
Q 038702 153 SD 154 (154)
Q Consensus 153 ~~ 154 (154)
+.
T Consensus 384 ~~ 385 (524)
T 2j04_B 384 SR 385 (524)
T ss_dssp TT
T ss_pred Cc
Confidence 73
No 45
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=1.4e-27 Score=152.98 Aligned_cols=148 Identities=19% Similarity=0.240 Sum_probs=109.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|++|++||++++... ....+.+|...|.+++|+|+ +.+|++++.|++|++||++.............+..
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~--~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWE--KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCC--EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EEEEECCCEEEEEECCCCcce--EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 578999999999999875321 12234489999999999997 78999999999999999987543211111111222
Q ss_pred eEeEEEEEEcCC-----------------CcEEEEEccCCeEEEecCCCc---cceeEEeCCCcCCcceEEEecCCC---
Q 038702 79 WISSFRAIWGWD-----------------DSCIFIGNMTRTVEVISPAQR---RSVATLQSPYISAIPCRFHAHPHQ--- 135 (154)
Q Consensus 79 ~~~~~~~~~~~~-----------------~~~l~~~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 135 (154)
.+ ..+.|+|+ +.+|++++.|+.|++||++.. +.+..+.+|...+ .+++|+|..
T Consensus 152 ~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V--~~v~~sp~~~~~ 227 (316)
T 3bg1_A 152 GC--NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV--RDVAWAPSIGLP 227 (316)
T ss_dssp CB--CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE--EEEECCCCSSCS
T ss_pred Cc--ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce--EEEEecCCCCCC
Confidence 22 24567876 478999999999999999754 3556666665444 578999932
Q ss_pred ccEEEEEcCCCeEEEeeCC
Q 038702 136 VGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 136 ~~~l~~~~~d~~i~~wd~~ 154 (154)
+.+|++++.|++|++||++
T Consensus 228 ~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp CCEEEEEETTCEEEEEECS
T ss_pred CceEEEEcCCCeEEEEEcc
Confidence 2789999999999999863
No 46
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=1.1e-26 Score=160.13 Aligned_cols=145 Identities=16% Similarity=0.188 Sum_probs=110.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccc-cccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVN-FENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~-~~~~~~~~~~~~~~~~ 79 (154)
|++|+.|++|++||+..... ......+|...|.+++|+|++++|++++.|++|++|++.+ .+...... ...+..
T Consensus 463 lasgs~D~~v~lwd~~~~~~---~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~-~~~H~~- 537 (611)
T 1nr0_A 463 VAVGGQDSKVHVYKLSGASV---SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS-WTFHTA- 537 (611)
T ss_dssp EEEEETTSEEEEEEEETTEE---EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC-CCCCSS-
T ss_pred EEEeCCCCeEEEEEccCCce---eeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee-eeeccc-
Confidence 57899999999999976431 0123358999999999999999999999999999999987 33222100 111222
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccc-e-eEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRS-V-ATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+.+++|+|++++|++++.|++|++|++.+++. . ..+.+|....+ .+++|+| ++. |++++.|++|++||+.
T Consensus 538 -~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v-~~v~fs~-d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 538 -KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV-NSVIWLN-ETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp -CEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCE-EEEEEEE-TTE-EEEEETTSCEEEEECC
T ss_pred -ceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCe-eEEEEcC-CCE-EEEecCCCCEEEEecc
Confidence 345789999999999999999999999987653 3 44445523333 6889999 666 9999999999999973
No 47
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3e-26 Score=148.23 Aligned_cols=146 Identities=6% Similarity=-0.065 Sum_probs=111.0
Q ss_pred CeeecCCCcEEEEEccCCC----CCCCC-Cceee-cccCCeEEEEEcC--CCCEEEEeeCCCeEEEEeccccccceeEee
Q 038702 1 MATSSTDGTACIWDLRSMA----TDKPE-PTKVL-SHKRAVHSAYFSP--SGSSLATTSFDDTIGIWSGVNFENTAMIHH 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~----~~~~~-~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~ 72 (154)
+++|+.|++|++|+..... ..... ..... +|.++|.+++|+| +++++++++.|++|++||+++.+.......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 4789999999999876321 00000 11222 6778999999999 999999999999999999998776443321
Q ss_pred cCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccce-eEEeC-CCcCCcceEEEecCCCccEEEEEcCCCeEEE
Q 038702 73 NNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV-ATLQS-PYISAIPCRFHAHPHQVGTLAGATGGGQVYV 150 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 150 (154)
. .... ...++|+|++.+|++|+.|+.|++||+++++.+ ..+.. |.. .+ ..++|+| ++.+|++++ |+.|++
T Consensus 168 ~--~~~~--i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v-~~l~fs~-~g~~l~s~~-~~~v~i 239 (343)
T 3lrv_A 168 K--SDVE--YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA-KI-KEVKFAD-NGYWMVVEC-DQTVVC 239 (343)
T ss_dssp C--SSCC--CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-CE-EEEEECT-TSSEEEEEE-SSBEEE
T ss_pred C--CCCc--eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-CE-EEEEEeC-CCCEEEEEe-CCeEEE
Confidence 1 1112 336789999999999999999999999999887 77776 443 33 6899999 889999999 559999
Q ss_pred eeCC
Q 038702 151 WTSD 154 (154)
Q Consensus 151 wd~~ 154 (154)
||+.
T Consensus 240 wd~~ 243 (343)
T 3lrv_A 240 FDLR 243 (343)
T ss_dssp EETT
T ss_pred EEcC
Confidence 9974
No 48
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.4e-26 Score=148.94 Aligned_cols=149 Identities=14% Similarity=0.176 Sum_probs=112.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCC----C-CceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeE---
Q 038702 1 MATSSTDGTACIWDLRSMATDKP----E-PTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMI--- 70 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~----~-~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~--- 70 (154)
|++|+.|+.|++||++.+..... . ...+.+|...|.+++|+|+ +++|++++.|+.|++||+++.+....+
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc
Confidence 57899999999999987643110 1 2233489999999999999 999999999999999998765432110
Q ss_pred ------------------------------------------------------eecCCCCceEeEEEEEEcCCC----c
Q 038702 71 ------------------------------------------------------HHNNQTGRWISSFRAIWGWDD----S 92 (154)
Q Consensus 71 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~----~ 92 (154)
.....+.. .+..++|+|++ .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS--LIRSISWAPSIGRWYQ 231 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS--CEEEEEECCCSSCSSE
T ss_pred ccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc--ceeEEEECCCCCCcce
Confidence 00011111 23467899998 8
Q ss_pred EEEEEccCCeEEEecCCCc----------------------------------------------cceeEEeCCCcCCcc
Q 038702 93 CIFIGNMTRTVEVISPAQR----------------------------------------------RSVATLQSPYISAIP 126 (154)
Q Consensus 93 ~l~~~~~d~~i~i~~~~~~----------------------------------------------~~~~~~~~~~~~~~~ 126 (154)
+|++++.||.|++||++.+ +.+..+.+|...+
T Consensus 232 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-- 309 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV-- 309 (351)
T ss_dssp EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE--
T ss_pred EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE--
Confidence 9999999999999999864 4555566554443
Q ss_pred eEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 127 CRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 127 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..++|+| ++.+|++++.||.|++||++
T Consensus 310 ~~~~~s~-~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 310 WSVSWNL-TGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEcC-CCCEEEEecCCCcEEEEecC
Confidence 6889999 78999999999999999973
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6e-26 Score=150.75 Aligned_cols=152 Identities=14% Similarity=0.184 Sum_probs=115.9
Q ss_pred CeeecCCCcEEEEEccCCCCCC-CCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEecc---ccccceeEe-e---
Q 038702 1 MATSSTDGTACIWDLRSMATDK-PEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGV---NFENTAMIH-H--- 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~---~~~~~~~~~-~--- 72 (154)
|++|+.||+|++||+....... .......+|...|.+++|+|++++|++++.|+.|++||++ .++...... +
T Consensus 79 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~ 158 (437)
T 3gre_A 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIR 158 (437)
T ss_dssp EEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeE
Confidence 5899999999999997722111 1123444799999999999999999999999999999995 332222111 0
Q ss_pred ---cCC--CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC-CcCCcceEEEecCCCccEEEEEcCCC
Q 038702 73 ---NNQ--TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP-YISAIPCRFHAHPHQVGTLAGATGGG 146 (154)
Q Consensus 73 ---~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~ 146 (154)
..+ ....+..+...+++++.++++++.|+.|++||+++++.+..+..+ +...+ .+++|+| ++.+|++|+.||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~s~-~~~~l~s~~~dg 236 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV-SSICIDE-ECCVLILGTTRG 236 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE-EEEEECT-TSCEEEEEETTS
T ss_pred EEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce-EEEEECC-CCCEEEEEcCCC
Confidence 011 233344444457889999999999999999999999999999874 33333 6889999 789999999999
Q ss_pred eEEEeeCC
Q 038702 147 QVYVWTSD 154 (154)
Q Consensus 147 ~i~~wd~~ 154 (154)
.|++||++
T Consensus 237 ~i~iwd~~ 244 (437)
T 3gre_A 237 IIDIWDIR 244 (437)
T ss_dssp CEEEEETT
T ss_pred eEEEEEcC
Confidence 99999974
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=4.1e-26 Score=149.66 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=117.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeec---c---cCCeEEEEEcCCCCEEEEeeCC---CeEEEEeccccccceeEe
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLS---H---KRAVHSAYFSPSGSSLATTSFD---DTIGIWSGVNFENTAMIH 71 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~v~~~~~~~~~~~~~~~ 71 (154)
|++|+.|+.|++||+++.+. ...+.. | ...|.+++|+|++++|++++.| +.|++||+++.+....+.
T Consensus 200 l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRP----LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp EEEECTTSEEEEEETTTTEE----EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCcEEEEECCCCce----eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 57899999999999987653 344446 8 9999999999999999999999 999999999876655443
Q ss_pred ecCC----------CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEe------CC--------------C
Q 038702 72 HNNQ----------TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQ------SP--------------Y 121 (154)
Q Consensus 72 ~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~------~~--------------~ 121 (154)
.... +.. .+..++|+|++++|++++.|+.|++||+++++.+..+. .| +
T Consensus 276 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp BC--------CCBSBSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred cCcccccccccccccCC--cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc
Confidence 2000 122 34467899999999999999999999999999999988 55 0
Q ss_pred cCCcceEEEecCCCc----------cEEEEEcCCCeEEEeeCC
Q 038702 122 ISAIPCRFHAHPHQV----------GTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 122 ~~~~~~~~~~~~~~~----------~~l~~~~~d~~i~~wd~~ 154 (154)
... ...++|+| ++ .+|++++.||.|++||++
T Consensus 354 ~~~-v~~~~~~~-~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 354 EPG-VFDVKFLK-KGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp SCC-EEEEEEEC-TTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred CCc-eeEEEecc-ccccccccccccceEEEecCCCcEEEEEcC
Confidence 222 36889999 65 799999999999999973
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=3.3e-26 Score=159.70 Aligned_cols=142 Identities=15% Similarity=0.205 Sum_probs=112.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|++|++||++..+. ...+.+|.+.|++++|+|++++|++++.|+.|++||+++.+....+....
T Consensus 534 l~s~s~d~~v~vwd~~~~~~----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~------ 603 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKL----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS------ 603 (694)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS------
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC------
Confidence 47899999999999987653 33445899999999999999999999999999999999876654433221
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc-----------------CCcceEEEecCCCccEEEEEc
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI-----------------SAIPCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~ 143 (154)
....++|+|++.++++++ ++.|++||+++++.+..+..+.. ...+.+++|+| ++.+|++|+
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp-dg~~l~sgs 681 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFSGY 681 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECT-TSSEEEEEE
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC-CCCEEEEEc
Confidence 234678999988887665 66799999999988777653211 11246789999 889999999
Q ss_pred CCCeEEEeeCC
Q 038702 144 GGGQVYVWTSD 154 (154)
Q Consensus 144 ~d~~i~~wd~~ 154 (154)
.||.|++||+.
T Consensus 682 ~Dg~i~iW~i~ 692 (694)
T 3dm0_A 682 TDGVIRVWGIG 692 (694)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 99999999974
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4e-27 Score=153.69 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=103.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEecccccc---ceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFEN---TAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~---~~~~~~~~~~~ 77 (154)
|++|+.|+.|++||+.++.. ......+.+|...|.+++|+|++++|++++.|+.|++||+++.+. ...+.. .+.
T Consensus 70 l~s~s~d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~h~ 146 (377)
T 3dwl_C 70 IVTCSQDRNAYVYEKRPDGT-WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR--PLR 146 (377)
T ss_dssp EEEEETTSSEEEC------C-CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS--SCC
T ss_pred EEEEeCCCeEEEEEcCCCCc-eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec--ccC
Confidence 57899999999999987651 111344458999999999999999999999999999999998764 222221 122
Q ss_pred ceEeEEEEEEcCCCcEEEEEccCCeEEEecCC------------------CccceeEEeCCCcCCcceEEEecCCCccEE
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMTRTVEVISPA------------------QRRSVATLQSPYISAIPCRFHAHPHQVGTL 139 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 139 (154)
. .+..++|+|++++|++++.|+.|++||++ .++++..+ .|... + ..++|+| ++.+|
T Consensus 147 ~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v-~~~~~sp-~~~~l 220 (377)
T 3dwl_C 147 S--TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-V-HAVGFSP-SGNAL 220 (377)
T ss_dssp S--CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-E-EEEEECT-TSSCE
T ss_pred C--CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce-E-EEEEECC-CCCEE
Confidence 2 34467899999999999999999999985 24444445 34333 3 6789999 88999
Q ss_pred EEEcCCCeEEEeeCC
Q 038702 140 AGATGGGQVYVWTSD 154 (154)
Q Consensus 140 ~~~~~d~~i~~wd~~ 154 (154)
++++.|+.|++||++
T Consensus 221 ~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 221 AYAGHDSSVTIAYPS 235 (377)
T ss_dssp EEEETTTEEC-CEEC
T ss_pred EEEeCCCcEEEEECC
Confidence 999999999999973
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.9e-26 Score=147.67 Aligned_cols=142 Identities=7% Similarity=0.014 Sum_probs=109.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccc-eeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENT-AMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~-~~~~~~~~~~ 77 (154)
+++|+.|++|++||+++++ ..... .|...+.+++|+|++.+|++|+.|+.|++||+++.+.. ..+.. .+.
T Consensus 142 l~s~s~dg~i~~wd~~~~~-----~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~--~h~ 214 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDS-----QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV--DEE 214 (343)
T ss_dssp EEEEETTCCEEEEESSSSC-----EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC--CTT
T ss_pred EEEEeCCCcEEEEECCCCc-----EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec--cCC
Confidence 4789999999999998765 33333 45668999999999999999999999999999988766 33322 122
Q ss_pred ceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC---CcCCcceEEEecCCCccEEEEEcC-CCeEEEeeC
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP---YISAIPCRFHAHPHQVGTLAGATG-GGQVYVWTS 153 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~~wd~ 153 (154)
. .+..++|+|++.+|++++ ++.|++||+++++.+..+... ........++|+| ++.+|++++. |+.+++|++
T Consensus 215 ~--~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 215 A--KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp S--CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred C--CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEEE
Confidence 2 344678999999999999 559999999998876655431 1111113589999 8899999888 999999986
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=6.3e-26 Score=148.42 Aligned_cols=142 Identities=11% Similarity=0.114 Sum_probs=113.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee--ecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV--LSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
|++|+.|+.|++||+.+... .... .+|...|.+++|+| ++++|++++.|+.|++||+++........+. ...
T Consensus 89 l~s~~~dg~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~ 163 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNK----TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTD-SWD 163 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTC----EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCC-CSS
T ss_pred EEEEcCCCeEEEEeCCCccc----ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccC-CCC
Confidence 57899999999999987653 2222 26999999999999 7899999999999999999864333332222 122
Q ss_pred ceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeC
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTS 153 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~ 153 (154)
. .+..++|+|++++|++++.|+.|++||+ +++.+..+..|...+ .+++|+| ++. +|++++.|+.|++||+
T Consensus 164 ~--~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v--~~~~~~~-~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 164 Y--WYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV--THAEFNP-RCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp C--CEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE--EEEEECS-SCTTEEEEEETTSEEEEEEG
T ss_pred C--CeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE--EEEEECC-CCCCEEEEEeCCCEEEEEeC
Confidence 2 2346789999999999999999999999 577788888766544 5789999 556 9999999999999997
No 55
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=6.8e-27 Score=153.79 Aligned_cols=145 Identities=10% Similarity=0.058 Sum_probs=106.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCc-eeecccCCeEEEEEcC--------CCCEEEEeeCCCeEEEEecccccccee-E
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPT-KVLSHKRAVHSAYFSP--------SGSSLATTSFDDTIGIWSGVNFENTAM-I 70 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~~~~~~~~~~~~~-~ 70 (154)
|++|+.|++|++||.+.+........ .+.+|.+.|.+++|+| ++++|++++.|++|++||+++...... .
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~ 183 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY 183 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec
Confidence 57899999999999987643111111 1238999999999998 788999999999999999987655433 3
Q ss_pred eecCCCCceEeEEEEEEcCCCc-EEEEEccCCeEEEecCCCccceeEEe-------------------------CCCcCC
Q 038702 71 HHNNQTGRWISSFRAIWGWDDS-CIFIGNMTRTVEVISPAQRRSVATLQ-------------------------SPYISA 124 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~-------------------------~~~~~~ 124 (154)
.+.. ....++|+|++. +|++++.|++|++||+++++...... ++....
T Consensus 184 ~~~~------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 184 PLSS------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp ECSS------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred CCCC------CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 3332 234789999874 89999999999999999876543332 111122
Q ss_pred cceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 125 IPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 125 ~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+.|.+.++..|++++.|+++++||+
T Consensus 258 --~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 258 --ANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp --SEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred --eeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 356776558899999999999999997
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=1.6e-25 Score=144.06 Aligned_cols=149 Identities=17% Similarity=0.242 Sum_probs=112.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCce-eecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEee-------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTK-VLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHH------- 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~------- 72 (154)
|+||+.|++|++||+...+.....+.. +.+|...|.+++|+|++++|++++.|+.|++|+............
T Consensus 54 l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~ 133 (340)
T 4aow_A 54 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS 133 (340)
T ss_dssp EEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeE
Confidence 579999999999999876542222222 348999999999999999999999999999999875432211100
Q ss_pred ---------------------------------cCCCCceEeEEEEEEcCC--CcEEEEEccCCeEEEecCCCccceeEE
Q 038702 73 ---------------------------------NNQTGRWISSFRAIWGWD--DSCIFIGNMTRTVEVISPAQRRSVATL 117 (154)
Q Consensus 73 ---------------------------------~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~ 117 (154)
...+...+ ..++|+++ ..++++++.|+.|++||+++++.+..+
T Consensus 134 ~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~ 211 (340)
T 4aow_A 134 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV--SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 211 (340)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCE--EEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcc--cceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe
Confidence 00111112 23456665 457889999999999999999998888
Q ss_pred eCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 118 QSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+|...+ .+++|+| ++++|++|+.|+.|++||+.
T Consensus 212 ~~h~~~v--~~~~~s~-~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 212 IGHTGYL--NTVTVSP-DGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp CCCSSCE--EEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred cCCCCcE--EEEEECC-CCCEEEEEeCCCeEEEEEec
Confidence 8766544 5789999 88999999999999999974
No 57
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=9.3e-26 Score=149.44 Aligned_cols=144 Identities=17% Similarity=0.243 Sum_probs=116.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCC-CEEEE--eeCCCeEEEEeccccccceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSG-SSLAT--TSFDDTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
+++++.|+.+++|+...++...........|...|.+++|+|.+ ..+++ |+.|++|++||+.++.....+....
T Consensus 245 l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~--- 321 (420)
T 4gga_A 245 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS--- 321 (420)
T ss_dssp EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---
T ss_pred eeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---
Confidence 47899999999999987664333344455899999999999965 45554 4579999999999887766554432
Q ss_pred ceEeEEEEEEcCCCcEEEEEc--cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 78 RWISSFRAIWGWDDSCIFIGN--MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....+.|+|++..+++++ .|+.|++||+.+++++.++.+|...+ .+++|+| ++.+|++|+.|++|++||+
T Consensus 322 ---~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V--~~l~~sp-dg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 322 ---QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV--LSLTMSP-DGATVASAAADETLRLWRC 393 (420)
T ss_dssp ---CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSCEEEEETTTEEEEECC
T ss_pred ---ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE--EEEEEcC-CCCEEEEEecCCeEEEEEC
Confidence 234668999998887754 78999999999999999999876554 5789999 8899999999999999997
No 58
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=8.8e-26 Score=154.32 Aligned_cols=138 Identities=22% Similarity=0.304 Sum_probs=112.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++++.|+.|++||... +. ...+.+|...|.+++|+|++++|++++.|+.|++||...........+..
T Consensus 400 l~~~~~d~~v~~~~~~~-~~----~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~------ 468 (577)
T 2ymu_A 400 IASASDDKTVKLWNRNG-QL----LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSS------ 468 (577)
T ss_dssp EEEEETTSEEEEECTTC-CE----EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSS------
T ss_pred EEEEeCCCEEEEEeCCC-CE----EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCC------
Confidence 47899999999999643 21 44455899999999999999999999999999999975433323322322
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....++|+|++++|++++.|+.|++||. +++.+..+.+|...+ .+++|+| ++++|++++.|+.|++||.
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v--~~l~~s~-dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV--RGVAFSP-DGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE--EEEEECT-TSSCEEEEETTSEEEEECT
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE--EEEEEcC-CCCEEEEEECcCEEEEEeC
Confidence 2346789999999999999999999995 678888898776554 5789999 8899999999999999996
No 59
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=7.5e-26 Score=148.04 Aligned_cols=149 Identities=27% Similarity=0.391 Sum_probs=113.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEe-ecCCC--
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIH-HNNQT-- 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~-- 76 (154)
|++|+.|+.|++||+++.+... ......+|...|.+++|+| ++++|++++.|+.|++||+++.+....+. +....
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKN-SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTT-CEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEeCCCEEEEEeCCCCCccc-ceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 5789999999999998744211 1444558999999999999 99999999999999999999877654332 22110
Q ss_pred -CceE--------eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCe
Q 038702 77 -GRWI--------SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 77 -~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
...+ ..+.++|+|++++ +++.|+.|++||+.+++.+..+.++........++|+| ++.+|++++ |+.
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP-TGDVLASGM-GFN 374 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECT-TSSEEEEEE-TTE
T ss_pred cccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEec-CccEEEEec-CCc
Confidence 0001 1223556777766 77899999999999999999998765344435679999 889999997 999
Q ss_pred EEEeeCC
Q 038702 148 VYVWTSD 154 (154)
Q Consensus 148 i~~wd~~ 154 (154)
|++||++
T Consensus 375 i~iw~~~ 381 (383)
T 3ei3_B 375 ILIWNRE 381 (383)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999985
No 60
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.2e-25 Score=160.61 Aligned_cols=147 Identities=10% Similarity=0.005 Sum_probs=108.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee-------ecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccc------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV-------LSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENT------ 67 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~------ 67 (154)
|++|+.|++|++||+..+.......... .+|...|.+++|+|++++|++|+.||+|++|++.+.+..
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~ 529 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRP 529 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-------
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccC
Confidence 5899999999999998764311111111 178899999999999999999999999999999865310
Q ss_pred ------------------------------------eeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCc
Q 038702 68 ------------------------------------AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQR 111 (154)
Q Consensus 68 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~ 111 (154)
........+... +..++|+|+| +|++|+.|++|++||++++
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~--V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 530 ESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK--TSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp --------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS--EEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred CCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc--EEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 001111112223 3467899999 9999999999999999887
Q ss_pred cceeE--E---e-CCCcCCcceEEEec-----CCC---ccEEEEEcCCCeEEEeeC
Q 038702 112 RSVAT--L---Q-SPYISAIPCRFHAH-----PHQ---VGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 112 ~~~~~--~---~-~~~~~~~~~~~~~~-----~~~---~~~l~~~~~d~~i~~wd~ 153 (154)
..+.. + . +|...+ .+++|+ | + +.+|++|+.|++|++||+
T Consensus 607 ~~~~~~~~~~~~~gh~~~V--~sv~Fs~~~~~~-Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 607 AIIYMENIREISGAQSACV--TCIEFVIMEYGD-DGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEGGGTCSSCCCCE--EEEEEEEEECTT-SSSEEEEEEEEETTSEEEEEEE
T ss_pred eEEEEeehhHhccccccce--EEEEEEEEecCC-CCCcceEEEEEecCCcEEEEEE
Confidence 66542 2 1 333333 678999 7 4 489999999999999997
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.2e-26 Score=152.89 Aligned_cols=144 Identities=9% Similarity=0.042 Sum_probs=112.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeec--ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLS--HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.|+.|++||+++.+. ...+.+ |.+.|.+++|+|++++|++++.||.|++||+++.+....+... +..
T Consensus 185 l~~~~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~ 258 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG--DHA 258 (437)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT--TCE
T ss_pred EEEEeCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC--CCC
Confidence 57899999999999988663 344445 8999999999999999999999999999999986655444321 111
Q ss_pred eEeEEEEEE----cCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCC------------------------cceEEE
Q 038702 79 WISSFRAIW----GWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISA------------------------IPCRFH 130 (154)
Q Consensus 79 ~~~~~~~~~----~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 130 (154)
.+..++| ++++.+|++++.|+.|++||+++++.+..+.++.... ...+++
T Consensus 259 --~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 259 --PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp --EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred --ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 2335544 4568899999999999999999999888887553111 124567
Q ss_pred ecCCCccEEEEEcCCCeEEEeeCC
Q 038702 131 AHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 131 ~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+++ +.+|++|+.|+.|++||++
T Consensus 337 ~~~--~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 337 VSN--DKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EET--TEEEEEEGGGTEEEEEETT
T ss_pred ECC--ceEEEecCCCCeEEEEECC
Confidence 773 4899999999999999974
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-25 Score=143.42 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=119.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++++.||.|++||+++... ....+..|...|.+++|+|++++|++++.|+.|++||+++.+....+.+..
T Consensus 190 l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------ 260 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYE---YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC------ 260 (369)
T ss_dssp EEEEETTSEEEEEETTTTTE---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS------
T ss_pred EEEEcCCCEEEEEECCCCcE---eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCC------
Confidence 47889999999999987322 033444799999999999999999999999999999999887766655322
Q ss_pred eEEEEEEcCCCcEEEEEccCC--------------eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTR--------------TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGG 146 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~--------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 146 (154)
....++|+|+++++++++.++ .+++||..+++.+..+.+|...+ ..++|+| ++++|++++.||
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~s~-~~~~l~s~~~dg 337 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL--NTVAISP-QGTSYASGGEDG 337 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCE--EEEEECT-TSSEEEEEETTS
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcE--EEEEECC-CCCEEEEEcCCC
Confidence 234678999999999999888 89999999999999998776554 5789999 889999999999
Q ss_pred eEEEeeCC
Q 038702 147 QVYVWTSD 154 (154)
Q Consensus 147 ~i~~wd~~ 154 (154)
.|++||++
T Consensus 338 ~v~iw~~~ 345 (369)
T 3zwl_B 338 FIRLHHFE 345 (369)
T ss_dssp EEEEEEEC
T ss_pred eEEEEECc
Confidence 99999974
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=141.95 Aligned_cols=144 Identities=15% Similarity=0.226 Sum_probs=114.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCE---EEEeeCCCeEEEEeccccccceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSS---LATTSFDDTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
|++++.|+.|++||+++++...........|.+.|.++.++|.+.. +++++.++.|++||.+.........+..
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~--- 241 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS--- 241 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS---
T ss_pred EEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee---
Confidence 4789999999999998866433334444578899999999996653 3466789999999998877655544433
Q ss_pred ceEeEEEEEEcCCCcEEEEEc--cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 78 RWISSFRAIWGWDDSCIFIGN--MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....+.|+|++..+++++ .|+.|++||+++++++.++.+|...+ .+++|+| ++.+|++|+.||+|++||+
T Consensus 242 ---~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V--~~l~~sp-dg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 242 ---QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV--LSLTMSP-DGATVASAAADETLRLWRC 313 (318)
T ss_dssp ---CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE--EEEEECT-TSSCEEEEETTTEEEEECC
T ss_pred ---eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCE--EEEEEcC-CCCEEEEEecCCeEEEEEC
Confidence 233567899888776654 79999999999999999999876554 5789999 8899999999999999997
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=3e-25 Score=143.86 Aligned_cols=109 Identities=18% Similarity=0.317 Sum_probs=87.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCC-ceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEP-TKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.||.|++||+.+... .. ..+.+|...|.+++|+|++++|++++.|+.|++||+++.+......+.. .
T Consensus 57 l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~ 129 (368)
T 3mmy_A 57 LIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA----P 129 (368)
T ss_dssp EEEEETTSEEEEEEECTTSC---EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS----C
T ss_pred EEEECCCCcEEEEEcCCCCc---eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccC----c
Confidence 57899999999999987332 02 3444899999999999999999999999999999999887666554433 2
Q ss_pred EeEEEEEE--cCCCcEEEEEccCCeEEEecCCCccceeEEe
Q 038702 80 ISSFRAIW--GWDDSCIFIGNMTRTVEVISPAQRRSVATLQ 118 (154)
Q Consensus 80 ~~~~~~~~--~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 118 (154)
+ ..++| +|++.++++++.|+.|++||+++++.+..+.
T Consensus 130 v--~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 130 V--KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp E--EEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred e--EEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 3 35567 8999999999999999999998776554443
No 65
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.7e-25 Score=143.78 Aligned_cols=148 Identities=13% Similarity=0.169 Sum_probs=109.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC--CCCEEEEeeCCCeEEEEeccccccc------eeEee
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP--SGSSLATTSFDDTIGIWSGVNFENT------AMIHH 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~~~~~~~~~~------~~~~~ 72 (154)
|++|+.||.|++||+............+.+|...|.+++|+| ++++|++++.|+.|++||+++.... .....
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 105 (351)
T 3f3f_A 26 VATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCT 105 (351)
T ss_dssp EEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEE
T ss_pred EEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeee
Confidence 578999999999999875431111233348999999999999 6999999999999999999876421 11111
Q ss_pred cCCCCceEeEEEEEEcCC--CcEEEEEccCCeEEEecCCCccce------------------------------------
Q 038702 73 NNQTGRWISSFRAIWGWD--DSCIFIGNMTRTVEVISPAQRRSV------------------------------------ 114 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~~------------------------------------ 114 (154)
...+.. .+..++|+|+ +.++++++.|+.|++||+++++.+
T Consensus 106 ~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 183 (351)
T 3f3f_A 106 LNDSKG--SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE 183 (351)
T ss_dssp ECCCSS--CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC
T ss_pred ecccCC--ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCc
Confidence 112222 2346789999 999999999999999998765432
Q ss_pred ------------------------eEEeCCCcCCcceEEEecCCCc----cEEEEEcCCCeEEEeeC
Q 038702 115 ------------------------ATLQSPYISAIPCRFHAHPHQV----GTLAGATGGGQVYVWTS 153 (154)
Q Consensus 115 ------------------------~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~~wd~ 153 (154)
..+.+|.. . ...++|+| ++ .+|++++.||.|++||+
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~-i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 184 KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-L-IRSISWAP-SIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEECCCCCS-C-EEEEEECC-CSSCSSEEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCcEEEEccCCCceeeeeecCCCCc-c-eeEEEECC-CCCCcceEEEEEcCCCeEEEEeC
Confidence 12222222 2 26789999 55 79999999999999996
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=8.7e-25 Score=140.30 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=114.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++++ ||.|++||+........ ..... +|...|.+++|+|+++++++++.|+.|++||+++.+......... +..
T Consensus 66 l~~~~-dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~ 142 (337)
T 1gxr_A 66 VYTGG-KGCVKVWDISHPGNKSP-VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-SAP 142 (337)
T ss_dssp EEEEC-BSEEEEEETTSTTCCSC-SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC-SSS
T ss_pred EEEcC-CCeEEEEECCCCCceee-eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc-CCC
Confidence 35666 99999999987653221 22222 789999999999999999999999999999998876432222111 111
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++|+|+++++++++.|+.|++||+++++.+..+..|.... ..++|+| ++.+|++++.|+.|++||++
T Consensus 143 --~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i--~~~~~~~-~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 143 --ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA--SCIDISN-DGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp --CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred --ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce--EEEEECC-CCCEEEEEecCCcEEEEECC
Confidence 23467899999999999999999999999999888888665443 5789999 78999999999999999973
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=147.37 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=118.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++++.|+.|++||++..+. ...+.+|...|.+++|+|++ .+++++.|+.|++||+++.+....+... ..
T Consensus 262 l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~-- 331 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD---GV-- 331 (425)
T ss_dssp EEEEETTSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT---TC--
T ss_pred EEEEcCCCEEEEEECCCCcc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC---Cc--
Confidence 57899999999999988764 44455899999999999999 9999999999999999887765544321 11
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCcc--------------------ceeEEeCCCcCCcceEEEecCCCccEEE
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR--------------------SVATLQSPYISAIPCRFHAHPHQVGTLA 140 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (154)
....++|+|++++|++++.||.|++||+++++ .+..+..+........++|+| ++.+|+
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 410 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKIS 410 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEE
Confidence 23467899999999999999999999999888 788888765531337899999 788999
Q ss_pred EEcCCCeEEEeeCC
Q 038702 141 GATGGGQVYVWTSD 154 (154)
Q Consensus 141 ~~~~d~~i~~wd~~ 154 (154)
+++.||.|++||++
T Consensus 411 ~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 411 VAYSLQEGSVVAIP 424 (425)
T ss_dssp EEESSSCCEEEECC
T ss_pred EEecCceEEEEeec
Confidence 99999999999984
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=6.4e-26 Score=146.66 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=113.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC---CCCEEEEeeCCCeEEEEeccccccceeEe--ecCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP---SGSSLATTSFDDTIGIWSGVNFENTAMIH--HNNQ 75 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~~~~~~~~~~~~~~~--~~~~ 75 (154)
|++++.|+.|++||++..+ ......|...|.+++|+| +++.+++++.|+.|++||+++.+....+. ....
T Consensus 183 l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 183 VCAGYDNGDIKLFDLRNMA-----LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp EEEEETTSEEEEEETTTTE-----EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred EEEEccCCeEEEEECccCc-----eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 4788999999999998765 445568999999999999 89999999999999999999876654432 1111
Q ss_pred CCceEeEEEEEEcCCCc-EEEEEccCCeEEEecCCCc-------------------cceeEEeCCCcCCcceEEEecCCC
Q 038702 76 TGRWISSFRAIWGWDDS-CIFIGNMTRTVEVISPAQR-------------------RSVATLQSPYISAIPCRFHAHPHQ 135 (154)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 135 (154)
+.. .+..++|+|++. ++++++.||.|++||++.+ +.+..+..|...+ ..++|+| +
T Consensus 258 ~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~-~ 332 (357)
T 3i2n_A 258 HKS--TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI--SSLDWSP-D 332 (357)
T ss_dssp CSS--CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE--EEEEECS-S
T ss_pred CcC--CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe--eEEEEcC-C
Confidence 222 344678999998 8999999999999998754 3455566554443 6789999 6
Q ss_pred ccEEE-EEcCCCeEEEeeCC
Q 038702 136 VGTLA-GATGGGQVYVWTSD 154 (154)
Q Consensus 136 ~~~l~-~~~~d~~i~~wd~~ 154 (154)
+.+|+ +++.|+.|++||+.
T Consensus 333 ~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 333 KRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp STTEEEEEETTSEEEEEEEC
T ss_pred CCeEEEEecCCCcEEEEECC
Confidence 67776 89999999999973
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=6.3e-26 Score=150.88 Aligned_cols=151 Identities=28% Similarity=0.443 Sum_probs=113.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeE-eecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMI-HHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~-~~~~~~~~~ 79 (154)
|++|+.|+.|++||++...... ......+|...|++++|+|++++|++++.|+.|++||+.+....... .+.......
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 4689999999999998765321 12334589999999999999999999999999999999987765433 233333333
Q ss_pred EeEEEEEEcCCCcEEEEEc------------cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCe
Q 038702 80 ISSFRAIWGWDDSCIFIGN------------MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
...+...|+|++.++++++ .++.|++||..+++.+..+..++...+....+|+| ++.+|++|+ |+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fsp-dg~~lasg~-d~~ 422 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNP-MGDTLASAM-GYH 422 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECT-TSSCEEEEC-SSE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECC-CCCEEEEEc-CCc
Confidence 3344556777777766654 34579999999999998887666555534457999 888898876 889
Q ss_pred EEEeeCC
Q 038702 148 VYVWTSD 154 (154)
Q Consensus 148 i~~wd~~ 154 (154)
|++||++
T Consensus 423 i~iW~~~ 429 (435)
T 4e54_B 423 ILIWSQQ 429 (435)
T ss_dssp EEECCCC
T ss_pred EEEEECC
Confidence 9999974
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3e-25 Score=144.45 Aligned_cols=146 Identities=19% Similarity=0.214 Sum_probs=113.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.||.|++||+.+++.. .......|...|.+++|+|+ +++|++++.|+.|++||++............ +..
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~ 148 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAI 148 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC-CTT
T ss_pred EEEeccCCEEEEEEcCCCcee--EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC-CCC
Confidence 578999999999999876410 03344479999999999998 9999999999999999998875443322111 122
Q ss_pred eEeEEEEEEcC-------------CCcEEEEEccCCeEEEecCCCccc----eeEEeCCCcCCcceEEEecCCC---ccE
Q 038702 79 WISSFRAIWGW-------------DDSCIFIGNMTRTVEVISPAQRRS----VATLQSPYISAIPCRFHAHPHQ---VGT 138 (154)
Q Consensus 79 ~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~ 138 (154)
.+..++|+| ++.++++++.|+.|++||+++++. ...+.+|...+ .+++|+| + +.+
T Consensus 149 --~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v--~~~~~sp-~~~~~~~ 223 (379)
T 3jrp_A 149 --GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV--RDVAWSP-TVLLRSY 223 (379)
T ss_dssp --CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE--EEEEECC-CCSSSEE
T ss_pred --ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE--eEEEECC-CCCCCCe
Confidence 234678999 699999999999999999987653 34555554433 6889999 6 899
Q ss_pred EEEEcCCCeEEEeeCC
Q 038702 139 LAGATGGGQVYVWTSD 154 (154)
Q Consensus 139 l~~~~~d~~i~~wd~~ 154 (154)
|++++.||.|++||++
T Consensus 224 l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQD 239 (379)
T ss_dssp EEEEETTSCEEEEEES
T ss_pred EEEEeCCCEEEEEeCC
Confidence 9999999999999963
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=1e-25 Score=146.04 Aligned_cols=142 Identities=13% Similarity=0.150 Sum_probs=112.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++|+.||.|++||+.+++. ...+.+|...|.+++|+| ++++|++++.|+.|++||+++.+....+.....+..
T Consensus 88 l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~- 162 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQC----IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD- 162 (366)
T ss_dssp EEEEETTCEEEEECTTTCCE----EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-
T ss_pred EEEecCCCEEEEEEchhceE----eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-
Confidence 57899999999999987663 444558999999999999 999999999999999999998876655532122222
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeC----------------------------CCcCCcceEEEe
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQS----------------------------PYISAIPCRFHA 131 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 131 (154)
.+..++|+|++.+|++++.|+.|++||+++++.+..+.. |...+ .+++|
T Consensus 163 -~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~ 239 (366)
T 3k26_A 163 -EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV--DCVRW 239 (366)
T ss_dssp -CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC--CEEEE
T ss_pred -ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceE--EEEEE
Confidence 344678999999999999999999999998765544332 43333 46777
Q ss_pred cCCCccEEEEEcCCCeEEEeeC
Q 038702 132 HPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 132 ~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+ ++++++++.|+.|++||+
T Consensus 240 ~---~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 240 L---GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp E---TTEEEEECSSSEEEEEEE
T ss_pred c---CCEEEEEecCCEEEEEeC
Confidence 6 469999999999999996
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=8.5e-25 Score=140.36 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=115.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++++.|+.|++||+++++. ...+..|...|.+++|+|++++|++++.|+.|++||+++.+......+..
T Consensus 156 l~~~~~dg~v~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------ 225 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS------ 225 (337)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------
T ss_pred EEEEeCCCcEEEEeCCCCce----eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC------
Confidence 47899999999999987653 34444799999999999999999999999999999999887665554332
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++|+|+++++++++.++.|++||+++++.. .+..|...+ ..++|+| ++++|++++.||.|++||++
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v--~~~~~~~-~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCV--LSLKFAY-CGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCE--EEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccce--eEEEECC-CCCEEEEecCCCcEEEEECC
Confidence 2346789999999999999999999999988754 454444333 6889999 88999999999999999973
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=3.6e-25 Score=147.16 Aligned_cols=147 Identities=11% Similarity=0.091 Sum_probs=111.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCce--------eecccCCeEEEEEcCCC-CEEEEeeCCCeEEEEecccccc----c
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTK--------VLSHKRAVHSAYFSPSG-SSLATTSFDDTIGIWSGVNFEN----T 67 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~----~ 67 (154)
|++| .|+.|++||++.... ... +.+|...|.+++|+|++ ++|++++.|+.|++||+++.+. .
T Consensus 192 l~s~-~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDR----SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEE----EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred EEEe-CCCeEEEEECCCCCc----eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 4667 799999999984332 222 34899999999999998 9999999999999999998775 2
Q ss_pred eeEeecCCCCc-------eEeEEEEEEcCCCcEEEEEccCCeEEEecCCC-ccceeEEeCCCcCCc-------------c
Q 038702 68 AMIHHNNQTGR-------WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ-RRSVATLQSPYISAI-------------P 126 (154)
Q Consensus 68 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~-------------~ 126 (154)
..+........ ...+..++|+|++++|++++. +.|++||+++ ++++..+.+|..... .
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 345 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDK 345 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCC
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccc
Confidence 33321110000 002346789999999999998 9999999997 888888887643211 1
Q ss_pred eEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 127 CRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 127 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..++|+| ++.+|++|+.||.|++||++
T Consensus 346 ~~~~~s~-~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 346 FECCWNG-SDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp CCEEECT-TSSEEEEECSTTEEEEEETT
T ss_pred eEEEECC-CCCEEEEeccCCEEEEEEcC
Confidence 2379999 78999999999999999974
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=5.1e-25 Score=143.22 Aligned_cols=146 Identities=13% Similarity=0.205 Sum_probs=113.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.|+.|++||+...+.. ....+.+|...|.+++|+|++++|++++.|+.|++||+++.+........ .+..
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~-- 97 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWV--QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-RINR-- 97 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEE--EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC-CCSS--
T ss_pred EEEEeCCCEEEEEeCCCCcEE--eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee-cCCC--
Confidence 478889999999999876410 04445589999999999999999999999999999999877643332211 1222
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccc---eeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRS---VATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|+++++++++.|+.|++||++.++. ...+...+...+ ..++|+| ++.+|++++.|+.|++||+
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV-LSLDWHP-NSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCE-EEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCe-eEEEEcC-CCCEEEEEcCCCCEEEEEc
Confidence 234678999999999999999999999988764 333333333333 6899999 7899999999999999995
No 75
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.3e-24 Score=141.24 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=107.0
Q ss_pred ecCCCcEEEEEccCCCCC----------CC-C-CceeecccCCeEEEEEcCCCCEEEEeeCCCe-EEEEeccccccceeE
Q 038702 4 SSTDGTACIWDLRSMATD----------KP-E-PTKVLSHKRAVHSAYFSPSGSSLATTSFDDT-IGIWSGVNFENTAMI 70 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~----------~~-~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~~~~~~~~~~~~~~ 70 (154)
|+.||.|++||+.++... .. . ...+.+|.+.|.+++|+|++++|++++.|++ |++||+++++....+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 789999999999875410 00 0 2334589999999999999999999999998 999999988777655
Q ss_pred eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccce--eEEeC------------------C-CcCCcceEE
Q 038702 71 HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV--ATLQS------------------P-YISAIPCRF 129 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~------------------~-~~~~~~~~~ 129 (154)
... .+.. .+..++|+|++++|++++.|++|++||++.+... ..+.. . ........+
T Consensus 235 ~~g-~h~~--~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (355)
T 3vu4_A 235 RRG-LDRA--DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKI 311 (355)
T ss_dssp ECT-TCCS--CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEE
T ss_pred EcC-CCCC--cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEE
Confidence 421 0112 3457789999999999999999999999765321 11100 0 001111457
Q ss_pred EecCCCccEEEEEcCCCeEEEeeC
Q 038702 130 HAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 130 ~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+|+| +++++++++.||.+++|++
T Consensus 312 a~~~-d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 312 AWIS-ESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EESS-SSEEEEEETTTTEEEEEEE
T ss_pred EEeC-CCCEEEEEeCCCeEEEEEE
Confidence 8999 7889999999999999985
No 76
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.4e-25 Score=141.58 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=116.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+.+....+.+..
T Consensus 47 l~~~~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------ 116 (369)
T 3zwl_B 47 LFSCSKDSSASVWYSLNGER----LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPV------ 116 (369)
T ss_dssp EEEEESSSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS------
T ss_pred EEEEeCCCEEEEEeCCCchh----hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCC------
Confidence 57899999999999987663 44445899999999999999999999999999999999887766655332
Q ss_pred eEEEEEEcCCCcEEEEEccC-----CeEEEecCCCccc-----------eeEEeCCCcCCcceEEEecCCCccEEEEEcC
Q 038702 81 SSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRRS-----------VATLQSPYISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
....++|+|++.++++++.+ +.|++||+..... +..+..+........++|+| ++.+|++++.
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 195 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHK 195 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEET
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcC
Confidence 23467899999999999998 9999999986643 33344343322447889999 8899999999
Q ss_pred CCeEEEeeCC
Q 038702 145 GGQVYVWTSD 154 (154)
Q Consensus 145 d~~i~~wd~~ 154 (154)
||.|++||++
T Consensus 196 dg~i~i~d~~ 205 (369)
T 3zwl_B 196 DGKISKYDVS 205 (369)
T ss_dssp TSEEEEEETT
T ss_pred CCEEEEEECC
Confidence 9999999974
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=5.2e-25 Score=161.32 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=119.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.||+|++||+.+++. ...+.+|.+.|.+++|+|+++++++++.|+.|++||+.+++....+.. +...
T Consensus 630 l~s~~~d~~i~vw~~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~---~~~~- 701 (1249)
T 3sfz_A 630 IASCGADKTLQVFKAETGEK----LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE---HSEQ- 701 (1249)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSC-
T ss_pred EEEEeCCCeEEEEECCCCCE----EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC---CCCc-
Confidence 57899999999999988764 445558999999999999999999999999999999998876654432 2222
Q ss_pred eEEEEEEcC--CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGW--DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+..++|+| ++.++++++.|+.|++||+++++.+..+.+|...+ ..++|+| ++.++++++.||.|++||+
T Consensus 702 -v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v--~~~~~sp-~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 702 -VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV--NHCRFSP-DDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp -EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE--EEEEECS-STTEEEEEESSSEEEEEEG
T ss_pred -EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE--EEEEEec-CCCEEEEEECCCeEEEEeC
Confidence 34678998 55689999999999999999999999998776554 5789999 8899999999999999996
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.7e-25 Score=145.33 Aligned_cols=144 Identities=17% Similarity=0.251 Sum_probs=114.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecc------cCCeEEEEEcCCC-CEEEEeeCCC---eEEEEecccccc-cee
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSH------KRAVHSAYFSPSG-SSLATTSFDD---TIGIWSGVNFEN-TAM 69 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~v~~~~~~~~~~-~~~ 69 (154)
|++++.|+.|++||++..+. ...+..| ...|.+++|+|++ .++++++.|+ .|++||+++... ...
T Consensus 181 l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~ 256 (416)
T 2pm9_A 181 FASAGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT 256 (416)
T ss_dssp EEEESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC
T ss_pred EEEEcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE
Confidence 47899999999999987653 2333333 7899999999987 6899999998 999999998643 222
Q ss_pred EeecCCCCceEeEEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 70 IHHNNQTGRWISSFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
+.. .+.. .+..++|+| ++.+|++++.|+.|++||+++++.+..+..|...+ ..++|+|..+.+|++++.|+.|
T Consensus 257 ~~~--~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 257 LNQ--GHQK--GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC--FKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp CCS--CCSS--CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC--CCEEECTTCTTEEEECCSSSEE
T ss_pred eec--CccC--ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce--EEEEECCCCCCEEEEEecCCcE
Confidence 220 1111 344678999 89999999999999999999999999998776555 4789999333899999999999
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
++||++
T Consensus 331 ~iw~~~ 336 (416)
T 2pm9_A 331 EVQTLQ 336 (416)
T ss_dssp EEEESC
T ss_pred EEEEcc
Confidence 999974
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=1.1e-25 Score=144.15 Aligned_cols=147 Identities=15% Similarity=0.155 Sum_probs=107.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC-----------------CCEEEEeeCCCeEEEEeccc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS-----------------GSSLATTSFDDTIGIWSGVN 63 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~v~~~~~~~ 63 (154)
|++|+.|++|++||++...... ......+|...|.+++|+|+ +++|++++.|++|++||++.
T Consensus 120 lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 120 LACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp EEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred EEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 5789999999999998653200 01122378999999999997 47899999999999999975
Q ss_pred cccceeEeecCCCCceEeEEEEEEcCCC----cEEEEEccCCeEEEecCCCcc----ceeEEeCCCcCCcceEEEecCCC
Q 038702 64 FENTAMIHHNNQTGRWISSFRAIWGWDD----SCIFIGNMTRTVEVISPAQRR----SVATLQSPYISAIPCRFHAHPHQ 135 (154)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 135 (154)
............+...+ ..++|+|++ .+|++++.|++|++|++++.. ....+..+... ..+++|+| +
T Consensus 199 ~~~~~~~~~l~~h~~~V--~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~--v~~v~~sp-~ 273 (316)
T 3bg1_A 199 DGQWKEEQKLEAHSDWV--RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV--VWHVSWSI-T 273 (316)
T ss_dssp TSCEEEEECCBCCSSCE--EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSC--EEEEEECT-T
T ss_pred CCccceeeecccCCCce--EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCc--EEEEEEcC-C
Confidence 43222222222233333 467899986 789999999999999987631 12334444332 36899999 8
Q ss_pred ccEEEEEcCCCeEEEeeC
Q 038702 136 VGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 136 ~~~l~~~~~d~~i~~wd~ 153 (154)
+.+|++++.|++|++|+.
T Consensus 274 g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 274 ANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp TCCEEEEESSSCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEE
Confidence 899999999999999985
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.9e-25 Score=143.45 Aligned_cols=146 Identities=17% Similarity=0.252 Sum_probs=111.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.||.|++||+...... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+.+.+........ .+..
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~ 102 (379)
T 3jrp_A 26 LATCSSDKTIKIFEVEGETHK--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA-VHSA 102 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSS
T ss_pred EEEEECCCcEEEEecCCCcce--eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec-CCCc
Confidence 578999999999999743210 02334489999999999987 999999999999999999987632222211 1222
Q ss_pred eEeEEEEEEcCC--CcEEEEEccCCeEEEecCCCccc--eeEEeCCCcCCcceEEEecCC------------CccEEEEE
Q 038702 79 WISSFRAIWGWD--DSCIFIGNMTRTVEVISPAQRRS--VATLQSPYISAIPCRFHAHPH------------QVGTLAGA 142 (154)
Q Consensus 79 ~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~ 142 (154)
.+..++|+|+ +.++++++.|+.|++||+++... ...+..|...+ ..++|+|. ++.+|+++
T Consensus 103 --~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 103 --SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV--NSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp --CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE--EEEEECCCC----------CTTCEEEEE
T ss_pred --ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce--EEEEEcCccccccccccCCCCCCEEEEE
Confidence 2446789999 99999999999999999998743 33444444333 67899985 57899999
Q ss_pred cCCCeEEEeeC
Q 038702 143 TGGGQVYVWTS 153 (154)
Q Consensus 143 ~~d~~i~~wd~ 153 (154)
+.|+.|++||+
T Consensus 179 ~~dg~i~i~d~ 189 (379)
T 3jrp_A 179 GADNLVKIWKY 189 (379)
T ss_dssp ETTSCEEEEEE
T ss_pred eCCCeEEEEEe
Confidence 99999999986
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=8.3e-25 Score=143.47 Aligned_cols=148 Identities=16% Similarity=0.172 Sum_probs=116.5
Q ss_pred CeeecCCCcEEEEEccC------CCCCCCCCc-ee-------ecccCCeEEEEEcCCCCEEEEeeCCCeEEEEecccccc
Q 038702 1 MATSSTDGTACIWDLRS------MATDKPEPT-KV-------LSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFEN 66 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~------~~~~~~~~~-~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~ 66 (154)
|++|+.|+.|++||+.. ......... .+ ..|...|.+++|+|++ .+++++.|+.|++||+++.+.
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce
Confidence 47899999999999987 443111111 33 2388999999999999 999999999999999998766
Q ss_pred ceeEeecCCC---CceEeEEEEEEcCCCcEEEEEccC---CeEEEecCCCccceeEEeC-------------CCcCCcce
Q 038702 67 TAMIHHNNQT---GRWISSFRAIWGWDDSCIFIGNMT---RTVEVISPAQRRSVATLQS-------------PYISAIPC 127 (154)
Q Consensus 67 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~-------------~~~~~~~~ 127 (154)
...+.....+ .. ....++|+|++.+|++++.| +.|++||+++++.+..+.. |...+ .
T Consensus 220 ~~~~~~~~~h~~~~~--~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~ 295 (397)
T 1sq9_A 220 LYNFESQHSMINNSN--SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV--M 295 (397)
T ss_dssp EEEEECCC---CCCC--CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE--E
T ss_pred eEEEeccccccccCC--ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE--E
Confidence 5544420001 22 23467899999999999999 9999999999999988876 43333 6
Q ss_pred EEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 128 RFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 128 ~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.++|+| ++.+|++++.|+.|++||+.
T Consensus 296 ~~~~~~-~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 296 SLSFND-SGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEETT
T ss_pred EEEECC-CCCEEEEEeCCCeEEEEEcC
Confidence 889999 78999999999999999973
No 82
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.2e-24 Score=141.50 Aligned_cols=144 Identities=10% Similarity=-0.035 Sum_probs=103.0
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCC-----------------------------------CE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSG-----------------------------------SS 46 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~ 46 (154)
++++.|++|++||..+++ ......+...|.+++|+++. ..
T Consensus 75 ~~~~~d~~v~iWd~~~~~-----~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~ 149 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQ-----DVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGL 149 (355)
T ss_dssp EECSSTTEEEEEETTTTE-----EEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTE
T ss_pred EEECCccEEEEEECCCCc-----EEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccE
Confidence 467888999999998765 34445677788888887643 12
Q ss_pred EEE--eeCCCeEEEEeccccccce------------e-EeecCCCCceEeEEEEEEcCCCcEEEEEccCCe-EEEecCCC
Q 038702 47 LAT--TSFDDTIGIWSGVNFENTA------------M-IHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRT-VEVISPAQ 110 (154)
Q Consensus 47 l~~--~~~d~~v~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~i~~~~~ 110 (154)
++. |+.||.|++||+++..... . ......+.. .+..++|+|++++|++++.|++ |++||+++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~--~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN--PIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSS--CEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC--ceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 333 4567777777776543100 0 011111222 2346789999999999999998 99999999
Q ss_pred ccceeEEe-CCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 111 RRSVATLQ-SPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 111 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
++.+..+. +.+...+ .+++|+| ++.+|++++.|++|++||++
T Consensus 228 ~~~~~~~~~g~h~~~v-~~~~~s~-~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 228 GVLVREFRRGLDRADV-VDMKWST-DGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCEEEEEECTTCCSCE-EEEEECT-TSCEEEEEETTCEEEEEESS
T ss_pred CcEEEEEEcCCCCCcE-EEEEECC-CCCEEEEEECCCEEEEEEcc
Confidence 99999998 4233433 6899999 88999999999999999973
No 83
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2.2e-24 Score=141.60 Aligned_cols=145 Identities=13% Similarity=0.203 Sum_probs=111.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEe-e------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIH-H------ 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~-~------ 72 (154)
+++|+.|+.|++||+++++. ...+.+|...|.+++|+|++. .|++++.|+.|++||+++........ .
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSC----SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp EEEEESSSSEEEEESSSSCC----CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred EEEEcCCCeEEEEeCCCcce----eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 47889999999999987764 445558999999999999998 58999999999999998765322111 0
Q ss_pred ------cCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccc---------------------------------
Q 038702 73 ------NNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRS--------------------------------- 113 (154)
Q Consensus 73 ------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~--------------------------------- 113 (154)
...+.. .+..++|+|++++|++++.|+.|++||+++++.
T Consensus 235 ~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 235 QAVESANTAHNG--KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp CCTTTSSCSCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred eeeccccccccC--ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec
Confidence 011222 344678999999999999999999999876543
Q ss_pred --------------eeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 114 --------------VATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 114 --------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+..+.+|...+ ..++|+| ++.+|++++.||.|++||++
T Consensus 313 ~~~i~v~d~~~~~~~~~~~~~~~~v--~~~~~s~-~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 313 GSTIAVYTVYSGEQITMLKGHYKTV--DCCVFQS-NFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp TTEEEEEETTTCCEEEEECCCSSCE--EEEEEET-TTTEEEEEETTSCEEEEEEC
T ss_pred CCEEEEEECcCCcceeeeccCCCeE--EEEEEcC-CCCEEEEECCCCeEEEEeCC
Confidence 33334343333 5789999 78999999999999999974
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.2e-24 Score=144.64 Aligned_cols=146 Identities=16% Similarity=0.252 Sum_probs=112.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCC--C-CceeecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccc---cceeEeec
Q 038702 1 MATSSTDGTACIWDLRSMATDKP--E-PTKVLSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFE---NTAMIHHN 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~--~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~---~~~~~~~~ 73 (154)
|++|+.||.|++|++........ . ...+.+|...|.+++|+| ++..|++++.|+.|++||+++.. ....+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-- 274 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-- 274 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE--
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee--
Confidence 57899999999999987432100 0 123348999999999999 77899999999999999999874 222221
Q ss_pred CCCCceEeEEEEEEcCCCc-EEEEEccCCeEEEecCCC-ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEe
Q 038702 74 NQTGRWISSFRAIWGWDDS-CIFIGNMTRTVEVISPAQ-RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVW 151 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~w 151 (154)
.+... +..++|+|++. ++++++.||.|++||+++ .+.+..+..|...+ .+++|+|....+|++++.|+.|++|
T Consensus 275 -~~~~~--v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v--~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 275 -AHTAE--VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI--FQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp -CCSSC--EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE--EEEEECSSCTTEEEEEETTSCCEEE
T ss_pred -cCCCC--eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE--EEEEECCCCCCEEEEEeCCCcEEEE
Confidence 12222 34678999887 688999999999999997 56677887665444 6889999554689999999999999
Q ss_pred eC
Q 038702 152 TS 153 (154)
Q Consensus 152 d~ 153 (154)
|+
T Consensus 350 d~ 351 (430)
T 2xyi_A 350 DL 351 (430)
T ss_dssp EG
T ss_pred eC
Confidence 97
No 85
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.5e-25 Score=153.87 Aligned_cols=142 Identities=11% Similarity=0.092 Sum_probs=115.7
Q ss_pred CeeecC-CCcEEEEEccCCCCCCCCC-ceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSST-DGTACIWDLRSMATDKPEP-TKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~-d~~v~vw~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++++. |+.|++||+..... . ..+.+|...|.+++|+|++++|++++.|+.|++||+.+.+....+.. .+..
T Consensus 459 l~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~~ 532 (615)
T 1pgu_A 459 VAVGLEEGNTIQVFKLSDLEV----SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA--FRTS 532 (615)
T ss_dssp EEEEETTTSCEEEEETTEEEE----EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC--CCSS
T ss_pred EEEeecCCCeEEEEECCCccc----cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeec--CCCC
Confidence 467888 99999999987642 1 33347999999999999999999999999999999988776544321 0222
Q ss_pred eEeEEEEEEcC----------CCcEEEEEccCCeEEEecCCCc-cceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCe
Q 038702 79 WISSFRAIWGW----------DDSCIFIGNMTRTVEVISPAQR-RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 79 ~~~~~~~~~~~----------~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
.+..++|+| ++++|++++.|+.|++||+.++ +.+..+.+|...+ ..++|+| ++. |++++.|+.
T Consensus 533 --~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v--~~l~~s~-~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 533 --KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV--NNLLWET-PST-LVSSGADAC 606 (615)
T ss_dssp --CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE--EEEEEEE-TTE-EEEEETTSC
T ss_pred --ceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccce--EEEEEcC-CCC-eEEecCCce
Confidence 344678999 9999999999999999999988 7777777765444 6789999 677 999999999
Q ss_pred EEEeeCC
Q 038702 148 VYVWTSD 154 (154)
Q Consensus 148 i~~wd~~ 154 (154)
|++||++
T Consensus 607 v~iw~~~ 613 (615)
T 1pgu_A 607 IKRWNVV 613 (615)
T ss_dssp EEEEEEC
T ss_pred EEEEeee
Confidence 9999974
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=6.5e-25 Score=155.04 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=117.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||.|++||+.++.. ...+.+|..+|.+++|+|++++|++++.|+.|++||+.+++....+.. +..
T Consensus 28 la~~~~~g~v~iwd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~~~-- 98 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVE----VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA---HPD-- 98 (814)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC---CSS--
T ss_pred EEEEeCCCEEEEEECCCCce----EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec---CCC--
Confidence 57899999999999988663 445558999999999999999999999999999999998876654431 112
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCc-cceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQR-RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+..++|+|++++|++++.||.|++||+.++ .....+.+|...+ ..++|+|.++..|++++.||.|++||+
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV--MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE--EEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE--EEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 2446789999999999999999999999987 5566666655443 578999966789999999999999997
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=1.2e-24 Score=141.09 Aligned_cols=141 Identities=8% Similarity=0.029 Sum_probs=112.4
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeec-----ccCCeEEEEEcCC----CCEEEEeeCCCeEEEEeccccccceeEee
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLS-----HKRAVHSAYFSPS----GSSLATTSFDDTIGIWSGVNFENTAMIHH 72 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d~~v~~~~~~~~~~~~~~~~ 72 (154)
++++.++.|++||+.+++. ...+.. |...|.+++|+|+ +++|++++.|+.|++||+.+.+....+..
T Consensus 38 ~~~~~~~~v~vw~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 38 FATVGSNRVTLYECHSQGE----IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp EEEEETTEEEEEEECGGGC----EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred EEECCCCEEEEEEcCCCcE----EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 4566677999999987653 222222 6688999999998 67999999999999999998776554431
Q ss_pred cCCCCceEeEEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEE---eCCCcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 73 NNQTGRWISSFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATL---QSPYISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
+.. .+..++|+| ++.+|++++.|+.|++||+++++.+..+ ..|...+ ..++|+| ++.+|++++.||.|
T Consensus 114 ---~~~--~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~l~~~~~dg~i 185 (366)
T 3k26_A 114 ---HGN--AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV--LSADYDL-LGEKIMSCGMDHSL 185 (366)
T ss_dssp ---CCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE--EEEEECT-TSSEEEEEETTSCE
T ss_pred ---CCC--cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce--eEEEECC-CCCEEEEecCCCCE
Confidence 222 234678999 8999999999999999999999988887 3444333 6899999 88999999999999
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
++||++
T Consensus 186 ~i~d~~ 191 (366)
T 3k26_A 186 KLWRIN 191 (366)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 999974
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.9e-24 Score=141.60 Aligned_cols=140 Identities=20% Similarity=0.216 Sum_probs=118.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++++.|+.|++||++.... ...+..|...|.+++|+|++++|++++.|+.|++||+++.+....+.. +..
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~-- 290 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTP----TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG---HSQ-- 290 (425)
T ss_dssp EEEECGGGCEEEEETTCSSC----SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC---CSS--
T ss_pred EEEEcCCCeEEEEEcCCCce----eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC---CCc--
Confidence 46789999999999988764 445558999999999999999999999999999999998776655532 111
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....++|+|++ ++++++.|+.|++||+++++.+..+..+...+ ..++|+| ++.+|++++.||.|++||+
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i--~~~~~s~-~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI--FAGRISQ-DGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE--EEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE--EEEEEcC-CCCEEEEEECCCeEEEEEC
Confidence 23467899999 99999999999999999999988888665444 5789999 7899999999999999997
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=2.8e-24 Score=139.72 Aligned_cols=146 Identities=14% Similarity=0.105 Sum_probs=114.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec-CCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN-NQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~~~~~ 79 (154)
|++++.|+.|++||+..++.. .......|...|.+++|+|++++|++++.|+.+++||++........... ..+..
T Consensus 67 l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~- 143 (372)
T 1k8k_C 67 IVTCGTDRNAYVWTLKGRTWK--PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS- 143 (372)
T ss_dssp EEEEETTSCEEEEEEETTEEE--EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-
T ss_pred EEEEcCCCeEEEEECCCCeee--eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-
Confidence 578999999999999765420 01223478999999999999999999999999999999887643322211 22222
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCC------------------CccceeEEeCCCcCCcceEEEecCCCccEEEE
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPA------------------QRRSVATLQSPYISAIPCRFHAHPHQVGTLAG 141 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 141 (154)
.+..++|+|+++++++++.|+.|++||++ .++.+..+..|...+ ..++|+| ++.+|++
T Consensus 144 -~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~l~~ 219 (372)
T 1k8k_C 144 -TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV--HGVCFSA-NGSRVAW 219 (372)
T ss_dssp -CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE--EEEEECS-SSSEEEE
T ss_pred -CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE--EEEEECC-CCCEEEE
Confidence 33467899999999999999999999954 567777776554433 6789999 7889999
Q ss_pred EcCCCeEEEeeC
Q 038702 142 ATGGGQVYVWTS 153 (154)
Q Consensus 142 ~~~d~~i~~wd~ 153 (154)
++.|+.|++||+
T Consensus 220 ~~~d~~i~i~d~ 231 (372)
T 1k8k_C 220 VSHDSTVCLADA 231 (372)
T ss_dssp EETTTEEEEEEG
T ss_pred EeCCCEEEEEEC
Confidence 999999999997
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.3e-24 Score=143.19 Aligned_cols=141 Identities=19% Similarity=0.259 Sum_probs=112.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEee--CCCeEEEEeccccccceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTS--FDDTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
|++|+.|+.|++||+++... ...+..|...|.+++|+|++. .+++++ .|+.|++||+++.+....+.+..
T Consensus 232 l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~--- 304 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS--- 304 (401)
T ss_dssp EEEEETTSCEEEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS---
T ss_pred EEEEeCCCeEEEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC---
Confidence 57899999999999987653 344458999999999999764 566654 79999999999887766554432
Q ss_pred ceEeEEEEEEcCCCcEEEE--EccCCeEEEecCCCccceeE--EeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 78 RWISSFRAIWGWDDSCIFI--GNMTRTVEVISPAQRRSVAT--LQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~--~~~d~~i~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
....++|+|+++++++ |+.||.|++|++.+++.... +.+|...+ ..++|+| ++.+|++++.||.|++||+
T Consensus 305 ---~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v--~~~~~s~-dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 305 ---QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV--LYSALSP-DGRILSTAASDENLKFWRV 378 (401)
T ss_dssp ---CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC--CEEEECT-TSSEEEEECTTSEEEEEEC
T ss_pred ---cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE--EEEEECC-CCCEEEEEeCCCcEEEEEC
Confidence 2446789999999999 55899999999998655444 55555444 5789999 8899999999999999997
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
.
T Consensus 379 ~ 379 (401)
T 4aez_A 379 Y 379 (401)
T ss_dssp C
T ss_pred C
Confidence 3
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.3e-24 Score=143.14 Aligned_cols=139 Identities=9% Similarity=0.050 Sum_probs=111.5
Q ss_pred eeecCCCcEEEEEcc--CCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccce-----eEee
Q 038702 2 ATSSTDGTACIWDLR--SMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTA-----MIHH 72 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~-----~~~~ 72 (154)
++|+.||.|++||+. .++. ...+. .|...|.+++|+|++++|++++.++.+.+|++.+..... ...|
T Consensus 119 ~~~~~dg~v~iwd~~~~~~~~----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h 194 (450)
T 2vdu_B 119 ACADSDKSLLVFDVDKTSKNV----LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH 194 (450)
T ss_dssp EEEGGGTEEEEEEECSSSSSC----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC
T ss_pred EEECCCCeEEEEECcCCCCce----eeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecc
Confidence 789999999999998 5542 22232 577899999999999999999999999999998766542 2222
Q ss_pred cCCCCceEeEEEEEEcCC---CcEEEEEccCCeEEEecCCCccceeEEe-CCCcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 73 NNQTGRWISSFRAIWGWD---DSCIFIGNMTRTVEVISPAQRRSVATLQ-SPYISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
.. .+..++|+|+ +++|++++.|+.|++||+++++.+..+. +|...+ ..++|+ ++.+|++++.|+.|
T Consensus 195 ~~------~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v--~~~~~s--d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 195 VS------MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV--SSICCG--KDYLLLSAGGDDKI 264 (450)
T ss_dssp SS------CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE--EEEEEC--STTEEEEEESSSEE
T ss_pred cC------ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce--EEEEEC--CCCEEEEEeCCCeE
Confidence 22 2346789999 9999999999999999999998887744 444333 577888 67899999999999
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
++||++
T Consensus 265 ~vwd~~ 270 (450)
T 2vdu_B 265 FAWDWK 270 (450)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999973
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.8e-25 Score=144.58 Aligned_cols=152 Identities=13% Similarity=0.187 Sum_probs=116.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC-CCEEEEeeCCCeEEEEeccccc------cceeEeec
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFE------NTAMIHHN 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~------~~~~~~~~ 73 (154)
|++|+.|+.|++||+............+.+|...|.+++|+|+ +++|++++.|+.|++||+++.+ ........
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 5788999999999998732211113344589999999999998 8999999999999999999876 33222111
Q ss_pred CCCCceEeEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCc----CCcceEEEecCCCccEEEEEcCCC--
Q 038702 74 NQTGRWISSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYI----SAIPCRFHAHPHQVGTLAGATGGG-- 146 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~-- 146 (154)
..+... +..++|+|+ +.++++++.|+.|++||+++++.+..+..+.. ......++|+|....++++++.|+
T Consensus 162 ~~~~~~--v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 162 MSSVDE--VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp CCSSCC--CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred cCCCCC--eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 122222 336789999 78999999999999999999998888876531 223378999995457999999999
Q ss_pred -eEEEeeCC
Q 038702 147 -QVYVWTSD 154 (154)
Q Consensus 147 -~i~~wd~~ 154 (154)
.|++||+.
T Consensus 240 ~~i~~~d~~ 248 (416)
T 2pm9_A 240 PSILIWDLR 248 (416)
T ss_dssp CCCCEEETT
T ss_pred ceEEEEeCC
Confidence 99999973
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=3.9e-24 Score=142.11 Aligned_cols=150 Identities=13% Similarity=0.143 Sum_probs=112.7
Q ss_pred CeeecCCCcEEEEEccCCCC------CCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccc-ee---
Q 038702 1 MATSSTDGTACIWDLRSMAT------DKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENT-AM--- 69 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~-~~--- 69 (154)
|++++.||.|++|++..... .......+.+|...|++++|+|++. +|++++.||.|++|++...... ..
T Consensus 144 lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 223 (430)
T 2xyi_A 144 IATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA 223 (430)
T ss_dssp EEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEEC
T ss_pred EEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecc
Confidence 57899999999999986211 0111444558999999999999988 9999999999999999874321 11
Q ss_pred EeecCCCCceEeEEEEEEcC-CCcEEEEEccCCeEEEecCCCc---cceeEEeCCCcCCcceEEEecCCCccEEEEEcCC
Q 038702 70 IHHNNQTGRWISSFRAIWGW-DDSCIFIGNMTRTVEVISPAQR---RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
......+.. .+..++|+| ++.++++++.|+.|++||++++ +.+..+..|...+ .+++|+|....+|++|+.|
T Consensus 224 ~~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v--~~i~~~p~~~~~l~tg~~d 299 (430)
T 2xyi_A 224 KNIFTGHTA--VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV--NCLSFNPYSEFILATGSAD 299 (430)
T ss_dssp SEEECCCSS--CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE--EEEEECSSCTTEEEEEETT
T ss_pred ceeecCCCC--CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe--EEEEeCCCCCCEEEEEeCC
Confidence 111112222 234678999 6789999999999999999987 5667776555443 6789999544589999999
Q ss_pred CeEEEeeCC
Q 038702 146 GQVYVWTSD 154 (154)
Q Consensus 146 ~~i~~wd~~ 154 (154)
|.|++||+.
T Consensus 300 g~v~vwd~~ 308 (430)
T 2xyi_A 300 KTVALWDLR 308 (430)
T ss_dssp SEEEEEETT
T ss_pred CeEEEEeCC
Confidence 999999973
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-24 Score=155.44 Aligned_cols=146 Identities=9% Similarity=0.016 Sum_probs=113.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEee------cC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHH------NN 74 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~------~~ 74 (154)
|++++.|++|++||+.+++ ......|.+.|++++|+|+++++++|+.||.|++||+++......... ..
T Consensus 72 L~S~s~D~~v~lWd~~~~~-----~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQK-----VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp EEEEETTCEEEEEETTTCS-----EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred EEEEECcCeEEEEECCCCc-----EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence 5789999999999998765 444456888999999999999999999999999999987764311100 01
Q ss_pred CCCceEeEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCC----------------cCCcceEEEecCCCcc
Q 038702 75 QTGRWISSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPY----------------ISAIPCRFHAHPHQVG 137 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 137 (154)
..++...+.+++|+|+ +..+++++.|+.| +||+++++.+..+..+. ......+++|+| ++.
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~ 224 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSL 224 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSS
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCC
Confidence 1111123346789996 5789999999999 99999999888887541 012237899999 789
Q ss_pred EEEEEcCCCeEEEeeC
Q 038702 138 TLAGATGGGQVYVWTS 153 (154)
Q Consensus 138 ~l~~~~~d~~i~~wd~ 153 (154)
+|++++.||+|++||+
T Consensus 225 ~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDA 240 (902)
T ss_dssp EEEEEETTCCEEEEET
T ss_pred EEEEEECCCeEEEEEC
Confidence 9999999999999997
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=143.65 Aligned_cols=149 Identities=10% Similarity=0.077 Sum_probs=110.1
Q ss_pred CeeecCCCcEEEEEccCCCCC--------------------CCCC--------------c-e-eecccCCeEEEEEcCCC
Q 038702 1 MATSSTDGTACIWDLRSMATD--------------------KPEP--------------T-K-VLSHKRAVHSAYFSPSG 44 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~--------------------~~~~--------------~-~-~~~~~~~v~~~~~~~~~ 44 (154)
|++++.|+.|++||+...... .... . . ..+|...|.+++|+|++
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 189 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY 189 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence 578999999999999763210 0000 0 1 23799999999999999
Q ss_pred CEEEEeeCCCeEEEEecccccc-ceeEe----ecCCCCceEeEEEEEEcCCC-cEEEEEccCCeEEEecCCCccc----e
Q 038702 45 SSLATTSFDDTIGIWSGVNFEN-TAMIH----HNNQTGRWISSFRAIWGWDD-SCIFIGNMTRTVEVISPAQRRS----V 114 (154)
Q Consensus 45 ~~l~~~~~d~~v~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~----~ 114 (154)
++|+++ .|+.|++||++.... ..... ....+.. .+..++|+|++ .+|++++.|+.|++||+++++. +
T Consensus 190 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE--VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC--CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc--ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 999998 799999999985432 22221 1111222 34467899998 9999999999999999999886 6
Q ss_pred eEEeCCCcC----------CcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 115 ATLQSPYIS----------AIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 115 ~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..+..+... .....++|+| ++.+|++++. +.|++||+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETT
T ss_pred eEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCC
Confidence 777765441 1236899999 8899999999 999999973
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=2.4e-24 Score=139.34 Aligned_cols=141 Identities=13% Similarity=0.185 Sum_probs=111.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeeccc----CCeEEEE----EcCCCCEEEEeeCCCeEEEEeccccccceeEee
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHK----RAVHSAY----FSPSGSSLATTSFDDTIGIWSGVNFENTAMIHH 72 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~----~~v~~~~----~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~ 72 (154)
|++|+.|+.|++||++..... ...+..|. ..+.+++ |+|+++++++++.|+.|++||+++.+......+
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDP---VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSC---SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCeEEEEeCCCCCCc---ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC
Confidence 578999999999999876531 23333333 3899998 788999999999999999999998876544444
Q ss_pred cCCCCceEeEEEEEEcC---CCcEEEEEccCCeEEEecCCCccceeEEe-----CCCcCCcceEEEecCCCcc-EEEEEc
Q 038702 73 NNQTGRWISSFRAIWGW---DDSCIFIGNMTRTVEVISPAQRRSVATLQ-----SPYISAIPCRFHAHPHQVG-TLAGAT 143 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~l~~~~ 143 (154)
.. .+..++|+| ++.++++++.|+.|++||+++++.+..+. +|...+ ..++|+| ++. +|++++
T Consensus 209 ~~------~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~~l~~~~ 279 (357)
T 3i2n_A 209 KN------GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV--WQVRHLP-QNRELFLTAG 279 (357)
T ss_dssp SS------CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE--EEEEEET-TEEEEEEEEE
T ss_pred CC------ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE--EEEEECC-CCCcEEEEEe
Confidence 32 244678999 89999999999999999999887766554 554433 6789999 666 899999
Q ss_pred CCCeEEEeeC
Q 038702 144 GGGQVYVWTS 153 (154)
Q Consensus 144 ~d~~i~~wd~ 153 (154)
.||.|++||+
T Consensus 280 ~dg~i~iwd~ 289 (357)
T 3i2n_A 280 GAGGLHLWKY 289 (357)
T ss_dssp TTSEEEEEEE
T ss_pred CCCcEEEeec
Confidence 9999999996
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.2e-24 Score=144.23 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=113.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEc--CCCCEEEEeeCCCeEEEEeccccccceeE--------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFS--PSGSSLATTSFDDTIGIWSGVNFENTAMI-------- 70 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~~~~~~~~~~~~~~-------- 70 (154)
|++|+.||+|++||+++++. ...+.+|.+.|.+++|+ ++++++++++.|+.|++||+++.......
T Consensus 176 l~s~s~dg~i~vwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCC----THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSE
T ss_pred EEEEeCCCCEEEEECCCCcE----EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcce
Confidence 57899999999999987763 34444899999999998 47789999999999999999876543211
Q ss_pred ------------eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccE
Q 038702 71 ------------HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGT 138 (154)
Q Consensus 71 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (154)
.....+...+. ++++++.++++++.|+.|++||+++++.+..+.+|...+ ..++|+| ++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~-~~~~ 324 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVR----TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI--YSTIYDH-ERKR 324 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEE----EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEEET-TTTE
T ss_pred EeeccCCCeEEEEEccCccceEE----EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCE--EEEEEcC-CCCE
Confidence 11111121222 346789999999999999999999999999998765544 5789999 7899
Q ss_pred EEEEcCCCeEEEeeCC
Q 038702 139 LAGATGGGQVYVWTSD 154 (154)
Q Consensus 139 l~~~~~d~~i~~wd~~ 154 (154)
+++|+.||.|++||++
T Consensus 325 l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 325 CISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEEETTSCEEEEETT
T ss_pred EEEEeCCCcEEEEECC
Confidence 9999999999999973
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1e-23 Score=138.96 Aligned_cols=142 Identities=14% Similarity=0.111 Sum_probs=113.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||.|++||+.+++. ...+.+|...|.+++| +++.+++++.|+.|++||++.......... .+..
T Consensus 149 l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~-- 218 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQTK----LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ--GHSS-- 218 (401)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE--CCSS--
T ss_pred EEEECCCCeEEEEECcCCeE----EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEc--CCCC--
Confidence 57899999999999987663 4444589999999999 567999999999999999985443322211 1112
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc--CCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT--GGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~~wd~~ 154 (154)
.+..++|+|++.+|++++.|+.|++||+++++.+..+..|...+ .+++|+|....++++++ .|+.|++||++
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV--KAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC--CEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE--EEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 23467899999999999999999999999999888887665544 57899996667888865 89999999973
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=1.2e-23 Score=138.05 Aligned_cols=145 Identities=17% Similarity=0.283 Sum_probs=114.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCcee---------ecccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKV---------LSHKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~ 70 (154)
|++|+.||.|++||+.+........... .+|...|.+++|+| ++++|++++.|+.|++||+.+.+....+
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF 138 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec
Confidence 5789999999999998765421100000 14999999999999 7889999999999999999988776655
Q ss_pred eecCCCCceEeEEEEEEcC---CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCe
Q 038702 71 HHNNQTGRWISSFRAIWGW---DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
.+.. ....+.++| ++.++++++.|+.|++||+++++.+..+..|...+ .+++|+|....+|++++.||.
T Consensus 139 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 139 NFEE------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI--LAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp ECSS------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE--EEEEECSSCTTEEEEEETTSC
T ss_pred cCCC------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE--EEEEECCCCCcEEEEEcCCCc
Confidence 5332 123556777 45599999999999999999999998888765544 578999944347999999999
Q ss_pred EEEeeC
Q 038702 148 VYVWTS 153 (154)
Q Consensus 148 i~~wd~ 153 (154)
|++||+
T Consensus 211 i~i~d~ 216 (408)
T 4a11_B 211 VKLWDV 216 (408)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999997
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1e-23 Score=134.15 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=109.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeec-ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLS-HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
+++++.|+.|++||.... ...+.. |...+.+++|+|++. +++++.|+.|++||+++.+....+... ..
T Consensus 158 l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~---~~- 226 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV------IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGH---ES- 226 (313)
T ss_dssp EEEEETTSCEEEEETTEE------EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECC---SS-
T ss_pred EEEEECCCCEEEEecCce------EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcC---Cc-
Confidence 478999999999994321 233334 899999999999998 999999999999999987766554321 11
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++|+|++ .+++++.|+.|++||+++++.+..+..+...+ ..++|+| ++. +++++.||.|++||++
T Consensus 227 -~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i--~~~~~~~-~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 227 -FVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISI--WSVDCMS-NGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp -CEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCE--EEEEECT-TSC-EEEEETTSCEEEEESC
T ss_pred -eEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceE--EEEEEcc-CCC-EEEEeCCCcEEEEeCC
Confidence 24467899999 68899999999999999999999998765443 6789999 656 6679999999999974
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-24 Score=151.33 Aligned_cols=147 Identities=19% Similarity=0.200 Sum_probs=113.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.||.|++||+.++... ......+|...|.+++|+|+ ++.+++++.||.|++||+++........... +..
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~--~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~-~~~ 146 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAI 146 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC-CSS
T ss_pred EEEEeCCCeEEEEECCCCccc--ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec-CCC
Confidence 578999999999999876410 03344589999999999998 9999999999999999998874433222111 111
Q ss_pred eEeEEEEEEcC-------------CCcEEEEEccCCeEEEecCCCc----cceeEEeCCCcCCcceEEEecCCC--ccEE
Q 038702 79 WISSFRAIWGW-------------DDSCIFIGNMTRTVEVISPAQR----RSVATLQSPYISAIPCRFHAHPHQ--VGTL 139 (154)
Q Consensus 79 ~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~l 139 (154)
.+..++|+| ++.++++++.||.|++||++++ .....+.+|...+ .+++|+|.. +.+|
T Consensus 147 --~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V--~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 147 --GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV--RDVAWSPTVLLRSYL 222 (753)
T ss_dssp --CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE--EEEEECCCCSSSEEE
T ss_pred --ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE--EEEEeccCCCCCCEE
Confidence 234678998 5899999999999999999876 3445566555443 688999932 8999
Q ss_pred EEEcCCCeEEEeeCC
Q 038702 140 AGATGGGQVYVWTSD 154 (154)
Q Consensus 140 ~~~~~d~~i~~wd~~ 154 (154)
++++.||.|++||+.
T Consensus 223 ~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 223 ASVSQDRTCIIWTQD 237 (753)
T ss_dssp EEEESSSCEEEEEES
T ss_pred EEEecCCEEEEecCC
Confidence 999999999999963
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6e-24 Score=149.62 Aligned_cols=146 Identities=17% Similarity=0.252 Sum_probs=111.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC--CCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS--GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
|++|+.||.|++||+...... ....+.+|.++|.+++|+|+ +++|++++.||.|++||+.+.......... .+..
T Consensus 24 latg~~dg~I~vwd~~~~~~~--~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~-~h~~ 100 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHK--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA-VHSA 100 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEE--EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSS
T ss_pred EEEEECCCcEEEEecCCCCCc--cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc-CCCC
Confidence 578999999999999743210 02334489999999999987 999999999999999999887532222211 1222
Q ss_pred eEeEEEEEEcCC--CcEEEEEccCCeEEEecCCCccc--eeEEeCCCcCCcceEEEecCC------------CccEEEEE
Q 038702 79 WISSFRAIWGWD--DSCIFIGNMTRTVEVISPAQRRS--VATLQSPYISAIPCRFHAHPH------------QVGTLAGA 142 (154)
Q Consensus 79 ~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~ 142 (154)
.+..++|+|+ +.++++++.||.|++||++++.. ...+.+|...+ ..++|+|. ++.++++|
T Consensus 101 --~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v--~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 101 --SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV--NSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp --CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCE--EEEEECCCC---------CGGGCCEEEE
T ss_pred --CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCce--EEEEecCcccccccccccCCCCCEEEEE
Confidence 2446789999 99999999999999999998733 34444444333 67899984 47899999
Q ss_pred cCCCeEEEeeC
Q 038702 143 TGGGQVYVWTS 153 (154)
Q Consensus 143 ~~d~~i~~wd~ 153 (154)
+.||.|++||+
T Consensus 177 s~dg~I~iwd~ 187 (753)
T 3jro_A 177 GADNLVKIWKY 187 (753)
T ss_dssp ETTSCEEEEEE
T ss_pred ECCCeEEEEec
Confidence 99999999986
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=1.9e-23 Score=134.59 Aligned_cols=143 Identities=11% Similarity=0.031 Sum_probs=112.3
Q ss_pred CeeecCCCcEEEEEccC---------CCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccc-cccceeE
Q 038702 1 MATSSTDGTACIWDLRS---------MATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVN-FENTAMI 70 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~-~~~~~~~ 70 (154)
|++++.|+.|++||++. .+ ......|...|.+++|+|++ +++++.|+.|++||+++ .......
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~ 187 (342)
T 1yfq_A 115 LIAASWDGLIEVIDPRNYGDGVIAVKNL-----NSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTI 187 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEEEEES-----CSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEE
T ss_pred EEEEcCCCeEEEEcccccccccccccCC-----eeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccccee
Confidence 57899999999999986 44 23334588999999999887 99999999999999998 5443222
Q ss_pred eecCCCCceEeEEEEEEcC-CCcEEEEEccCCeEEEecCCCc------cceeEEeCCCc-------CCcceEEEecCCCc
Q 038702 71 HHNNQTGRWISSFRAIWGW-DDSCIFIGNMTRTVEVISPAQR------RSVATLQSPYI-------SAIPCRFHAHPHQV 136 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~------~~~~~~~~~~~-------~~~~~~~~~~~~~~ 136 (154)
... .... ....++|+| ++.++++++.||.+++|++... +....+..+.. ......++|+| ++
T Consensus 188 ~~~-~~~~--~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~ 263 (342)
T 1yfq_A 188 EES-GLKY--QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RH 263 (342)
T ss_dssp EEC-SCSS--CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TT
T ss_pred eec-CCCC--ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CC
Confidence 211 1122 234678999 9999999999999999999876 77788877644 11336889999 78
Q ss_pred cEEEEEcCCCeEEEeeCC
Q 038702 137 GTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 137 ~~l~~~~~d~~i~~wd~~ 154 (154)
.+|++++.||.|++||++
T Consensus 264 ~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 264 KFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CCEEEEETTSCEEEEETT
T ss_pred CEEEEecCCceEEEEcCc
Confidence 899999999999999974
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=3.2e-23 Score=138.62 Aligned_cols=138 Identities=14% Similarity=0.139 Sum_probs=108.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.|+.|++||+++.+. ...+.+|...|.+++|+|+++.+++++.|+.|++||+++++....+.. +...+
T Consensus 283 l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~v 355 (464)
T 3v7d_B 283 VVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG---HTALV 355 (464)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCE
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC---CCCcE
Confidence 47899999999999987663 444458999999999999999999999999999999998776554432 22223
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
. .+.|+ +.++++++.||.|++||+++++...... +.... ..++++| ++.++++++ |+.|++||++
T Consensus 356 ~--~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~-~~~~~~~-~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 356 G--LLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLS-AITTFYV-SDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp E--EEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCC-CEEEEEE-CSSEEEEEE-TTEEEEEETT
T ss_pred E--EEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec--CCCCc-cEEEEEe-CCCEEEEec-CCeEEEEECC
Confidence 3 44565 6899999999999999999887666654 22222 4567888 778999888 8999999973
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3e-23 Score=139.99 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=101.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccC-----CeEEEEEcCCCCEEEEeeCCCeEEEEecccccc-------ce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKR-----AVHSAYFSPSGSSLATTSFDDTIGIWSGVNFEN-------TA 68 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~-------~~ 68 (154)
||+++.||.|++||... ......|.. .+.+++|||+|++|++|+.||+|++||+.++.. ..
T Consensus 100 LAs~s~dg~V~iwd~~~-------~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ 172 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK-------MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFES 172 (588)
T ss_dssp EEEEETTSCEEEEETTE-------EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEE
T ss_pred EEEEeCCCcEEEEeCCc-------eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeee
Confidence 58899999999999543 222223554 599999999999999999999999999998753 11
Q ss_pred eE-eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccce---eEEe-CCCcCCcceEEEecCCCccEEEEEc
Q 038702 69 MI-HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV---ATLQ-SPYISAIPCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 69 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 143 (154)
.+ .+...+.. .+.+++|+|++ +++++.|+.+++||+..++.. .++. +|...+ .+++|+ ++.|++++
T Consensus 173 ti~~~~~gh~~--~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V--~svaFs---g~~LASa~ 243 (588)
T 2j04_A 173 SIRLSDAGSKD--WVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI--TDLKIV---DYKVVLTC 243 (588)
T ss_dssp EEECSCTTCCC--CEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC--CCEEEE---TTEEEEEC
T ss_pred eeecccccccc--cEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE--EEEEEE---CCEEEEEe
Confidence 11 11222233 45577999999 888889999999999887742 4564 444334 567787 37888887
Q ss_pred CCCeEEEeeCC
Q 038702 144 GGGQVYVWTSD 154 (154)
Q Consensus 144 ~d~~i~~wd~~ 154 (154)
+++|++||++
T Consensus 244 -~~tIkLWd~~ 253 (588)
T 2j04_A 244 -PGYVHKIDLK 253 (588)
T ss_dssp -SSEEEEEETT
T ss_pred -CCeEEEEECC
Confidence 6999999974
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=3.2e-23 Score=146.45 Aligned_cols=144 Identities=17% Similarity=0.141 Sum_probs=115.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccc-eeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENT-AMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~-~~~~~~~~~~~~ 79 (154)
|++|+.||.|++||+.+++. ...+.+|.+.|.+++|+|++++|++++.|+.|++||+++.... ..+.. +..
T Consensus 70 l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~- 141 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEK----VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG---HEH- 141 (814)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC---CSS-
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC---CCC-
Confidence 57899999999999988763 4455589999999999999999999999999999999876332 22221 111
Q ss_pred EeEEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCC-CccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPH-QVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++|+| ++..+++++.||.|++||+.+++....+..++...+ ..++|+|. ++.+|++++.||.|++||++
T Consensus 142 -~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 142 -FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV-NYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp -CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC-CEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred -cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE-EEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 244678999 889999999999999999999888888876653433 46777762 56799999999999999963
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=3.9e-24 Score=140.69 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=95.3
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCC-CEEEEeeCCCeEEEEeccccccceeEeec------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSG-SSLATTSFDDTIGIWSGVNFENTAMIHHN------ 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~------ 73 (154)
|++|+.|++|+|||+.+... .....+|..++.+++|+|++ ++|++++.|++|++||+++.+........
T Consensus 159 las~s~D~tv~~Wd~~~~~~----~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGP----ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEETTSEEEEEEEETTEE----EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred EEEEECCCeEEEEECCCCce----eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 58999999999999987664 56667999999999999987 58999999999999999876543221100
Q ss_pred ----------------CCCCceEeEEEEEE-cCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCC------------
Q 038702 74 ----------------NQTGRWISSFRAIW-GWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISA------------ 124 (154)
Q Consensus 74 ----------------~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~------------ 124 (154)
..+...+ ..+.| .++++.+++++.|+.+++||+..++....+..+....
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v--~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSL--ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp CSEEEESGGGC------CCSSSC--SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred eEEecccccceeeeecccccccc--eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 0011111 23445 4899999999999999999998776555443321111
Q ss_pred ----cceEEEecCC-CccEEEEEcCCCeEEEeeCC
Q 038702 125 ----IPCRFHAHPH-QVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 125 ----~~~~~~~~~~-~~~~l~~~~~d~~i~~wd~~ 154 (154)
......++|. ++.++++|+.||+|++||++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~ 347 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY 347 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECC
Confidence 0012234433 44467788899999999974
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.7e-23 Score=137.19 Aligned_cols=147 Identities=10% Similarity=0.017 Sum_probs=114.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC---CCEEEEeeCCCeEEEEeccccccceeEeecCCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS---GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
|++|+.|+.|++|++............+.+|...|.+++|+|+ +++|++++.|+.|++||+++......+.. .+.
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~h~ 241 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF--GHK 241 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC--CCS
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec--CCC
Confidence 4788999999999998765421012245589999999999999 99999999999999999988766544221 112
Q ss_pred ceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCC-----------------------cCCcceEEEecCC
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPY-----------------------ISAIPCRFHAHPH 134 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~ 134 (154)
. .+..++|+ ++.+|++++.|+.|++||+++++.+..+..+. .......++++|
T Consensus 242 ~--~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 317 (450)
T 2vdu_B 242 H--FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK- 317 (450)
T ss_dssp S--CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-
T ss_pred C--ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-
Confidence 2 23467899 99999999999999999999999888876321 112336789999
Q ss_pred CccEEEEEc-CCCeEEEeeC
Q 038702 135 QVGTLAGAT-GGGQVYVWTS 153 (154)
Q Consensus 135 ~~~~l~~~~-~d~~i~~wd~ 153 (154)
++.+|++++ .|+.|++||+
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 778888888 8999999997
No 109
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=8.4e-23 Score=130.30 Aligned_cols=138 Identities=16% Similarity=0.239 Sum_probs=106.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCce--eecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTK--VLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
++.+.|++|+|||+.+++. ... ..+|...|.+++|+|++++|++|+.|++|++||+++++........ ...
T Consensus 39 lAvg~D~tV~iWd~~tg~~----~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h---~~~ 111 (318)
T 4ggc_A 39 LAVALDNSVYLWSASSGDI----LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH---SAR 111 (318)
T ss_dssp EEEEETTEEEEEETTTCCE----EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC---SSC
T ss_pred EEEEeCCEEEEEECCCCCE----EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCc---cce
Confidence 3445699999999988763 222 2368889999999999999999999999999999988766544321 111
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCcc-ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR-SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+ ..+++++..+++++.++.+++|+..... .+..+.+|.... ..+.+.+ ++.+|++++.|+.|++||+
T Consensus 112 ~----~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 112 V----GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAP-DGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp E----EEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECT-TSSEEEEEETTSCEEEEES
T ss_pred E----EEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCce--EEEEEcC-CCCEEEEEecCcceeEEEC
Confidence 2 2356678899999999999999988664 445566555444 5678888 7899999999999999997
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.8e-23 Score=130.68 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=109.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||.|++||+.+... ......|...|.+++|+|+++++++++.|+.+++|++..............+...+
T Consensus 32 l~s~~~dg~v~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i 107 (313)
T 3odt_A 32 VASVSRDGTVRLWSKDDQWL----GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNV 107 (313)
T ss_dssp EEEEETTSEEEEEEESSSEE----EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCE
T ss_pred EEEEEcCCcEEEEECCCCEE----EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCE
Confidence 57899999999999977653 44455899999999999999999999999999999998765333222222233333
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. .+.| ++.++++++.|+.|++|| .++.+..+..+.... ..+.+.|.+++++++++.|+.|++||.
T Consensus 108 ~--~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 108 C--SLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASV--WDAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp E--EEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCE--EEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred E--EEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCce--eEEEEccCCCCEEEEEECCCCEEEEec
Confidence 3 4456 678999999999999999 666677777665444 467777767789999999999999985
No 111
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.6e-23 Score=135.76 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=112.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEE--cCCCCEEEEeeCCCeEEEEeccccccceeEeecC----
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYF--SPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN---- 74 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~---- 74 (154)
|++|+.||.|++||+.+.+ .....+|...|.+++| +|++++|++++.|+.|++||+++.+....+....
T Consensus 101 l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 175 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQ-----AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYC 175 (368)
T ss_dssp EEEEETTSEEEEEETTTTE-----EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEE
T ss_pred EEEEcCCCcEEEEEcCCCC-----ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceE
Confidence 5789999999999998765 5566789999999999 8899999999999999999998654321111000
Q ss_pred ----------------------------------------------------------------------C---------
Q 038702 75 ----------------------------------------------------------------------Q--------- 75 (154)
Q Consensus 75 ----------------------------------------------------------------------~--------- 75 (154)
.
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 176 ADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp EEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred EEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 0
Q ss_pred --CCceE------------eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEE
Q 038702 76 --TGRWI------------SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAG 141 (154)
Q Consensus 76 --~~~~~------------~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 141 (154)
..+.. .+..++|+|++++|++++.||.|++||+++++.+..+..|...+ ..++|+| ++.+|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v--~~~~~s~-~g~~l~~ 332 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI--SACCFNH-NGNIFAY 332 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE--EEEEECT-TSSCEEE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc--eEEEECC-CCCeEEE
Confidence 00000 24567899999999999999999999999999998888665444 6889999 8899999
Q ss_pred EcCCCeEEEe
Q 038702 142 ATGGGQVYVW 151 (154)
Q Consensus 142 ~~~d~~i~~w 151 (154)
++.|+..+.|
T Consensus 333 ~s~d~~~~~~ 342 (368)
T 3mmy_A 333 ASSYDWSKGH 342 (368)
T ss_dssp EECCCSTTCG
T ss_pred Eecccccccc
Confidence 9988754444
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.5e-23 Score=134.98 Aligned_cols=142 Identities=13% Similarity=0.066 Sum_probs=109.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEec-cccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSG-VNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~~~~ 78 (154)
|++++.|+.|++|++....... ......+|...|.+++|+|+++ +|++++.|+.|++||+ .+.+....... .+..
T Consensus 26 l~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~~ 102 (342)
T 1yfq_A 26 LLITSWDGSLTVYKFDIQAKNV-DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN--EANL 102 (342)
T ss_dssp EEEEETTSEEEEEEEETTTTEE-EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSC--CCCS
T ss_pred EEEEcCCCeEEEEEeCCCCccc-cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecccc--CCCC
Confidence 5789999999999998765211 1234458999999999999999 9999999999999999 77655332220 0222
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCC---------ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ---------RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
. +..++|+| +.++++++.|+.|++||+++ ++++..+. +... ...++++| +. +++++.|+.|+
T Consensus 103 ~--v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~--v~~~~~~~-~~--l~~~~~d~~i~ 173 (342)
T 1yfq_A 103 G--ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK--IFTMDTNS-SR--LIVGMNNSQVQ 173 (342)
T ss_dssp C--EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC--EEEEEECS-SE--EEEEESTTEEE
T ss_pred c--eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc--eEEEEecC-Cc--EEEEeCCCeEE
Confidence 2 34678999 99999999999999999998 77666665 3322 26788988 43 99999999999
Q ss_pred EeeCC
Q 038702 150 VWTSD 154 (154)
Q Consensus 150 ~wd~~ 154 (154)
+||++
T Consensus 174 i~d~~ 178 (342)
T 1yfq_A 174 WFRLP 178 (342)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99974
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.91 E-value=7.3e-23 Score=136.12 Aligned_cols=139 Identities=18% Similarity=0.263 Sum_probs=108.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
|++|+.||.|++||+.+++. ...+.+|...|.+++|+ +..+++++.|+.|++||+++............+...+
T Consensus 186 l~sg~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 259 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEM----LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 259 (435)
T ss_dssp EEEEETTSCEEEEESSSCCE----EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred EEEEcCCCeEEEEECCCCcE----EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE
Confidence 57899999999999988763 44455899999999996 4699999999999999999877654333222333334
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
. .+.| ++.++++++.|+.|++||+++++.+..+.+|...+ .++.++ +.++++|+.||.|++||+.
T Consensus 260 ~--~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~---~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 260 N--VVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYR---DRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp E--EEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--EEEEEE---TTEEEEEETTSCEEEEETT
T ss_pred E--EEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcE--EEEEeC---CCEEEEEeCCCeEEEEECC
Confidence 3 3344 78899999999999999999999998888766554 355664 4789999999999999973
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=9e-23 Score=149.63 Aligned_cols=146 Identities=22% Similarity=0.268 Sum_probs=117.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecC------
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN------ 74 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~------ 74 (154)
+++|+.|+.|++||+.++.. ...+.+|.+.|.+++|+|+++.+++++.||.|++||+++...........
T Consensus 716 l~sg~~d~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 791 (1249)
T 3sfz_A 716 LATGSNDFFLKLWDLNQKEC----RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSE 791 (1249)
T ss_dssp EEEEETTSCEEEEETTSSSE----EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC----
T ss_pred EEEEeCCCeEEEEECCCcch----hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccC
Confidence 46899999999999988763 44455999999999999999999999999999999998764332211000
Q ss_pred ----------------C-------------------C---------CceEeEEEEEEcCCCcEEEEEccCCeEEEecCCC
Q 038702 75 ----------------Q-------------------T---------GRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ 110 (154)
Q Consensus 75 ----------------~-------------------~---------~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 110 (154)
+ . ++......++|+|++.++++++.|+.|++||+.+
T Consensus 792 ~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 792 DPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ----CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTT
T ss_pred CccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 0 0 0011122568999999999999999999999999
Q ss_pred ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 111 RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
++.+..+.+|...+ ..++|+| ++.+|++++.|+.|++||+
T Consensus 872 ~~~~~~~~~h~~~v--~~v~~sp-dg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 872 RLKVADCRGHLSWV--HGVMFSP-DGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp TEEEEEECCCSSCE--EEEEECT-TSSEEEEEETTSCEEEEEH
T ss_pred CceeeecCCCccce--EEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 99998888776554 5789999 8899999999999999985
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=2e-22 Score=133.56 Aligned_cols=139 Identities=16% Similarity=0.240 Sum_probs=106.8
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
+.+.|++|+|||..+++.. ......+|...|++++|+|+|++|++|+.|+.|++||+++.+....... +...+.
T Consensus 120 Avgld~tV~lWd~~tg~~~--~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~---h~~~v~- 193 (420)
T 4gga_A 120 AVALDNSVYLWSASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS---HSARVG- 193 (420)
T ss_dssp EEEETTEEEEEETTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEE-
T ss_pred EEEeCCEEEEEECCCCCEE--EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC---CCCceE-
Confidence 4456999999999887630 0112236888999999999999999999999999999998876554431 222222
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCc-cceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQR-RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. +++++.++++|+.|+.+++||.... ..+..+.+|.... ..+.+.| ++.++++++.|+.+++||.
T Consensus 194 -~--~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~--~~~~~~~-~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 194 -S--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAP-DGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp -E--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECT-TSSEEEEEETTSCEEEEES
T ss_pred -E--EeeCCCEEEEEeCCCceeEeeecccceeeEEecccccce--eeeeecC-CCCeeeeeeccccceEEee
Confidence 2 3456889999999999999998865 4456666665444 5788998 8899999999999999986
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=2.2e-22 Score=133.79 Aligned_cols=138 Identities=19% Similarity=0.268 Sum_probs=109.0
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.||.|++||+.+..... ......+|...|.+++| +++++++++.|+.|++||+++.+....+.. +...+
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v 299 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGI 299 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCE-EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCE
T ss_pred EEEeeCCCcEEEEeCCCCCCce-eeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC---CCCcE
Confidence 5789999999999998765310 01234489999999999 789999999999999999998876654432 12223
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. .+.+ ++.++++++.||.|++||+++++.+..+.+|...+ .++++ ++.+|++|+.||.|++||+
T Consensus 300 ~--~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~~~~---~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 300 A--CLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRF---DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp E--EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEC---CSSEEEEEETTSCEEEEEH
T ss_pred E--EEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcE--EEEEe---cCCEEEEEeCCCcEEEEEC
Confidence 3 3444 57899999999999999999999999998776554 45666 4589999999999999996
No 117
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=4.3e-23 Score=137.33 Aligned_cols=147 Identities=13% Similarity=0.171 Sum_probs=105.4
Q ss_pred eeecCCCcEEEEEccCCCCC-----C------CCCceeecccCCeEEEEEcCCCCEEE----EeeCCCeEEEEecccc--
Q 038702 2 ATSSTDGTACIWDLRSMATD-----K------PEPTKVLSHKRAVHSAYFSPSGSSLA----TTSFDDTIGIWSGVNF-- 64 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~-----~------~~~~~~~~~~~~v~~~~~~~~~~~l~----~~~~d~~v~~~~~~~~-- 64 (154)
++++.|+ +++|+....... . ........+...|.+++|+|++++|+ +++.|+.|++||+++.
T Consensus 52 ~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~ 130 (434)
T 2oit_A 52 FAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSN 130 (434)
T ss_dssp EEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHC
T ss_pred EEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEcccccc
Confidence 5566676 888876432110 0 00112235677899999999999999 7889999999999765
Q ss_pred ------ccceeEeecCCCCceEeEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc
Q 038702 65 ------ENTAMIHHNNQTGRWISSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG 137 (154)
Q Consensus 65 ------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (154)
+..........+.. .+..++|+|+ +.+|++++.||+|++||++++..+....+|...+ .+++|+| ++.
T Consensus 131 ~~~~~~~~~~~~~~~~~h~~--~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v--~~v~wsp-dg~ 205 (434)
T 2oit_A 131 EAKQQKRPFAYHKLLKDAGG--MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV--TSVCWSP-KGK 205 (434)
T ss_dssp TTCSSCCCSEEEECCCSGGG--SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE--EEEEECT-TSS
T ss_pred CCcCCcceeeeeeccCCCCC--ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce--eEEEEcC-CCC
Confidence 11111222112222 3446789998 7899999999999999999887665555443333 6899999 789
Q ss_pred EEEEEcCCCeEEEeeCC
Q 038702 138 TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 138 ~l~~~~~d~~i~~wd~~ 154 (154)
+|++|+.||+|++||++
T Consensus 206 ~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 206 QLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CEEEEETTSCEEEECTT
T ss_pred EEEEEcCCCcEEEEccC
Confidence 99999999999999973
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.2e-23 Score=138.45 Aligned_cols=116 Identities=14% Similarity=0.130 Sum_probs=89.0
Q ss_pred cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCC-CCceEeEEEEEEcCCCcEEEEEccCCeEEEecC
Q 038702 30 SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQ-TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISP 108 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~ 108 (154)
.|...|.+++|+|+|++|++++.||.|++||.+. ....+.+... ....+ .+++|+|+|++|++|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv--~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTY--HCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCE--EEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccE--EEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 5678999999999999999999999999999654 2222121110 11123 36799999999999999999999999
Q ss_pred CCccc-------eeEEe----CCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 109 AQRRS-------VATLQ----SPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 109 ~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+++. +.++. +|. . ...+++|+| ++ +++++.|++|++||++
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~-~-~V~sVawSP-dg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSK-D-WVTHIVWYE-DV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCC-C-CEEEEEEET-TE--EEEEETTCCEEEECCC
T ss_pred CCCccccccceeeeeeeccccccc-c-cEEEEEEcC-Cc--EEEEeCCCeEEEEECC
Confidence 98763 56663 333 2 336899999 76 8888999999999974
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=2.3e-22 Score=128.47 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=99.6
Q ss_pred CCCcEEEEEccC-CCCCCCCCceeecccCCeEEEEEcC---CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 6 TDGTACIWDLRS-MATDKPEPTKVLSHKRAVHSAYFSP---SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 6 ~d~~v~vw~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
.|+.|++|++.. ++. ......|...+..++|+| ++..|++++.|++|++||+.+++....+...... ...
T Consensus 155 ~d~~V~~~~~s~dG~~----~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~--v~~ 228 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGG----KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY--QAS 228 (356)
T ss_dssp TTCEEEEEEECTTSCE----EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCCcEEEEEECCCCce----eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc--eee
Confidence 599999999955 332 344558999999999999 7799999999999999999999877666421111 112
Q ss_pred EEEEEEcCCCcEE------------EEEccCCeEEEecCCCccceeEEe-----CCCcCCcceEEEecCCCccEEEEEcC
Q 038702 82 SFRAIWGWDDSCI------------FIGNMTRTVEVISPAQRRSVATLQ-----SPYISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 82 ~~~~~~~~~~~~l------------~~~~~d~~i~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
...++|+|++.++ ++|+.|++|++||..+++.+..+. +|.... ....+ .+.++++++.
T Consensus 229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~--lsg~~---sg~~lASgS~ 303 (356)
T 2w18_A 229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF--LEGDV---KDHCAAAILT 303 (356)
T ss_dssp CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE--EEEEE---ETTEEEEEET
T ss_pred eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee--Ecccc---CCCEEEEEcC
Confidence 3356789999876 567889999999999998876652 332221 22233 2568999999
Q ss_pred CCeEEEeeCC
Q 038702 145 GGQVYVWTSD 154 (154)
Q Consensus 145 d~~i~~wd~~ 154 (154)
|++|++||++
T Consensus 304 DgTIkIWDl~ 313 (356)
T 2w18_A 304 SGTIAIWDLL 313 (356)
T ss_dssp TSCEEEEETT
T ss_pred CCcEEEEECC
Confidence 9999999984
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=6.2e-22 Score=131.92 Aligned_cols=136 Identities=14% Similarity=0.298 Sum_probs=103.6
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.||.|++||+.+++. ...+.+|...|.+++| +++.+++++.|+.|++||+++.+....+. .+...+
T Consensus 212 l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v 282 (445)
T 2ovr_B 212 VVSGSRDATLRVWDIETGQC----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ---GHTNRV 282 (445)
T ss_dssp EEEEETTSEEEEEESSSCCE----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC---CCSSCE
T ss_pred EEEEeCCCEEEEEECCCCcE----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec---CCCCce
Confidence 46788888888888877653 3444578888888888 67888889999999999988776554433 122223
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..+.| ++.++++++.|+.|++||+++++.+..+.+|.... ..+.++ ++++++++.||.|++||++
T Consensus 283 --~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~~~~---~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 283 --YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELK---DNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp --EEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE--EEEEEE---TTEEEEEETTSCEEEEETT
T ss_pred --EEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE--EEEEEe---CCEEEEEeCCCeEEEEECC
Confidence 34455 78999999999999999999999999888765443 345554 4799999999999999973
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=1.3e-21 Score=130.39 Aligned_cols=143 Identities=14% Similarity=0.172 Sum_probs=108.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++|+.|+.|++||+++++. ...+.+|...+.++.+ +++.+++++.||.|++||+++.+....+.....+...+
T Consensus 292 l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 365 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 365 (445)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCE
T ss_pred EEEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCE
Confidence 46788899999999887653 3444478888888877 46789999999999999998877665554322233333
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeC---CCcCCcceEEEecCCCccEEEEEcCCCe----EEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQS---PYISAIPCRFHAHPHQVGTLAGATGGGQ----VYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~----i~~wd~ 153 (154)
. .++| ++.++++++.||.|++||+.+++.+..+.. ........+++|+| ++.++++|+.||+ |.+||+
T Consensus 366 ~--~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 366 T--CLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp E--EEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEEC
T ss_pred E--EEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEEC
Confidence 3 4456 468999999999999999999998888731 11223347899999 8899999999997 999997
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
+
T Consensus 441 ~ 441 (445)
T 2ovr_B 441 D 441 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 122
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=6.5e-22 Score=135.87 Aligned_cols=145 Identities=17% Similarity=0.182 Sum_probs=113.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccC---CeEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEee-cCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKR---AVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHH-NNQ 75 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~ 75 (154)
+++++.|+.|++||+.+.+. ...+.+|.. .|.+++|+|+ +++|++++.|+.|++||+++.+....+.. ...
T Consensus 176 l~~~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 251 (615)
T 1pgu_A 176 SMTVGDDGSVVFYQGPPFKF----SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 251 (615)
T ss_dssp EEEEETTTEEEEEETTTBEE----EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBC
T ss_pred EEEEeCCCcEEEEeCCCcce----eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccc
Confidence 47899999999999887663 344447888 9999999999 99999999999999999988776655411 001
Q ss_pred CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc--CCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 76 TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI--SAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+.. .+..++|+ ++.++++++.|+.|++||+++++.+..+..+.. ......+.+. ++.++++++.|+.|++||+
T Consensus 252 ~~~--~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 252 VQG--GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp CCS--CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred cCC--ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEEC
Confidence 222 23467889 999999999999999999999999888876521 1222455554 5789999999999999997
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
.
T Consensus 327 ~ 327 (615)
T 1pgu_A 327 G 327 (615)
T ss_dssp T
T ss_pred C
Confidence 3
No 123
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=1.9e-21 Score=126.84 Aligned_cols=144 Identities=7% Similarity=0.026 Sum_probs=90.1
Q ss_pred eeecCCCcEEEEEccCCCCCCCC-----CceeecccCCeEEEEEcCCCCEEEE--eeCCCeEEEEeccccccceeEeecC
Q 038702 2 ATSSTDGTACIWDLRSMATDKPE-----PTKVLSHKRAVHSAYFSPSGSSLAT--TSFDDTIGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~v~~~~~~~~~~~~~~~~~~ 74 (154)
++++.|+.+++|++......... ......+...+.+++|+|+|+++++ ++.|++|++||+++.+....+.+..
T Consensus 98 ~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~ 177 (365)
T 4h5i_A 98 TQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG 177 (365)
T ss_dssp HHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS
T ss_pred EEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC
Confidence 35678999999998765431000 0011134556899999999998765 4478999999999877665544322
Q ss_pred CCCceEeEEEEEEcCCCcEEEEEc-------------------------------------------cCC----eEEEec
Q 038702 75 QTGRWISSFRAIWGWDDSCIFIGN-------------------------------------------MTR----TVEVIS 107 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-------------------------------------------~d~----~i~i~~ 107 (154)
. +..++|+|+++++++++ .|+ .+++|+
T Consensus 178 ~------V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 178 E------VKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp C------CCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred c------eEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 1 12344555555555544 333 344444
Q ss_pred CCCccc----eeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 108 PAQRRS----VATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 108 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+..... ...+.+|... ..+++|+| ++++|++|+.|++|++||++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~--V~~~~~Sp-dg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKG--ITSMDVDM-KGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EETTEEEEEEEEEEESSCSC--EEEEEECT-TSCEEEEEETTSCEEEEETT
T ss_pred cccceecceeeeeecCCCCC--eEeEEECC-CCCceEEEcCCCEEEEEECC
Confidence 332221 1122223222 25789999 88999999999999999974
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=5.7e-21 Score=125.17 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=108.8
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
+++++.|+.|++||+.+++ ......+...+.+++|+|+++.+ ++++.|+.|++||+.+++....+....
T Consensus 5 ~vs~~~d~~v~v~d~~~~~-----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~----- 74 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNK-----VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS----- 74 (391)
T ss_dssp EEEETTTTEEEEEETTTTE-----EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----
T ss_pred EEEcCCCCEEEEEECCCCe-----EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----
Confidence 4789999999999998765 44445445568999999999976 677789999999998887665554332
Q ss_pred EeEEEEEEcCCCcEEE-EEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEE-EEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIF-IGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTL-AGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~ 154 (154)
....++|+|++++++ +++.++.|++||+.+++.+..+..+. . ...++|+| +++.+ ++++.|+.|++||+.
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~--~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-S--PLGLALSP-DGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-S--EEEEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred -CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-C--cceEEECC-CCCEEEEEeCCCCEEEEEECC
Confidence 234678999999775 45567999999999999888777432 2 36789999 66655 788899999999973
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.7e-21 Score=129.63 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=101.9
Q ss_pred eecCCCcEEEEEccCC-----CC-CCCCCcee-ecccCCeEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEeecC
Q 038702 3 TSSTDGTACIWDLRSM-----AT-DKPEPTKV-LSHKRAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~-----~~-~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~ 74 (154)
+|+.|+.|++||+.+. +. ........ .+|...|.+++|+|+ +++|++++.||+|++||+++.........
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~-- 190 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP-- 190 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC--
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC--
Confidence 7889999999999764 11 00001222 269999999999997 88999999999999999998744322111
Q ss_pred CCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc-----CCcceEEEecCCCccEEEE-EcCCC--
Q 038702 75 QTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI-----SAIPCRFHAHPHQVGTLAG-ATGGG-- 146 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~-~~~d~-- 146 (154)
+.. .+.+++|+|++++|++|+.||.|++||.+ ++....+..+.. .....+++|++ +..++++ .+.||
T Consensus 191 -~~~--~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 191 -STV--AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTL 265 (434)
T ss_dssp -GGG--CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCS
T ss_pred -CCC--ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCcc
Confidence 111 34467999999999999999999999998 555555554322 12347889998 5555543 33443
Q ss_pred ----eEEEeeC
Q 038702 147 ----QVYVWTS 153 (154)
Q Consensus 147 ----~i~~wd~ 153 (154)
.+++||+
T Consensus 266 ~~~~~v~i~~l 276 (434)
T 2oit_A 266 ETSPDVVMALL 276 (434)
T ss_dssp SSCCEEEEEEC
T ss_pred CCCCceEEEEe
Confidence 3889986
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.87 E-value=8.1e-20 Score=119.70 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=108.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
++++.|+.|++||+.+++ ......+...+.+++|+|+++.+ ++++.++.|++||+++.+......+..
T Consensus 132 ~~~~~~~~v~~~d~~~~~-----~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------ 200 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTKA-----VINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA------ 200 (391)
T ss_dssp EEETTTTEEEEEETTTTE-----EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS------
T ss_pred EEeCCCCEEEEEECCCCc-----EEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC------
Confidence 578889999999998765 34444445667999999999877 577789999999999876655554322
Q ss_pred eEEEEEEcCCCcEEEEEc---cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEE-EEEcCCCeEEEeeCC
Q 038702 81 SSFRAIWGWDDSCIFIGN---MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTL-AGATGGGQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~~wd~~ 154 (154)
....++|+|+++++++++ .++.|++||+++++.+..+..+.. ...++|+| +++++ ++++.|+.|++||++
T Consensus 201 ~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD---PAGIAVTP-DGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS---EEEEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC---ccEEEEcc-CCCEEEEEcCCCCEEEEEECC
Confidence 234678999999998888 689999999999998888875432 35789999 66655 778899999999974
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.85 E-value=4.6e-20 Score=122.32 Aligned_cols=145 Identities=14% Similarity=0.142 Sum_probs=109.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCc-eeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPT-KVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
+++++.|+.|++||+.+++....... ...+|...|.+++|+|+++.+++++.|+.|++||+++.+....+.. +..
T Consensus 137 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~---~~~- 212 (433)
T 3bws_A 137 AIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL---TGK- 212 (433)
T ss_dssp EEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC---SSS-
T ss_pred EEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC---CCC-
Confidence 35678889999999987653100000 2237888999999999999999999999999999988766554431 111
Q ss_pred EeEEEEEEcCCCcEEE-EEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc--------CCCeEEE
Q 038702 80 ISSFRAIWGWDDSCIF-IGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT--------GGGQVYV 150 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~~ 150 (154)
....++|+|++++++ +++.++.|++||+++++.+..+..+. ....++++| +++++++++ .|+.|++
T Consensus 213 -~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 213 -WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG---LPRGLLLSK-DGKELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp -SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS---EEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEE
T ss_pred -CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC---CceEEEEcC-CCCEEEEEECCCCccccCCCeEEE
Confidence 234668999998875 55589999999999998877776432 246789999 777887777 5889999
Q ss_pred eeCC
Q 038702 151 WTSD 154 (154)
Q Consensus 151 wd~~ 154 (154)
||++
T Consensus 288 ~d~~ 291 (433)
T 3bws_A 288 YSMD 291 (433)
T ss_dssp EETT
T ss_pred EECC
Confidence 9973
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.85 E-value=1.8e-19 Score=119.49 Aligned_cols=141 Identities=9% Similarity=0.065 Sum_probs=107.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
+++++.|+.|++||+++++. ...+..|...+.+++|+|+++.++ +++.|+.|++||+++.+....+....
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~----- 254 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAY----KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG----- 254 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCE----EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-----
T ss_pred EEEECCCCEEEEEECCCceE----EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-----
Confidence 46888999999999987653 344447889999999999999885 45579999999998776544333211
Q ss_pred EeEEEEEEcCCCcEEEEEc--------cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEe
Q 038702 80 ISSFRAIWGWDDSCIFIGN--------MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVW 151 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~--------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~w 151 (154)
....++|+|+++++++++ .|+.|++||+++++.+..+. +.. ....++|+|....++++++.|+.|++|
T Consensus 255 -~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~--~~~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 255 -LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG--NKRHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp -EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE--CEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred -CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCC--CcceEEECCCCCEEEEEecCCCEEEEE
Confidence 234678999999998888 48899999999988776663 222 235789999333466788999999999
Q ss_pred eCC
Q 038702 152 TSD 154 (154)
Q Consensus 152 d~~ 154 (154)
|++
T Consensus 331 d~~ 333 (433)
T 3bws_A 331 DLK 333 (433)
T ss_dssp ETT
T ss_pred ECC
Confidence 974
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=9.7e-19 Score=115.89 Aligned_cols=131 Identities=18% Similarity=0.101 Sum_probs=98.7
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCC---eEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDD---TIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
+.|++||+.... ...+.+|...+.+++|+|+|+.|++++.++ .|++||+.+++......+.. ....
T Consensus 159 ~~i~i~d~~g~~-----~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~------~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYN-----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR------HNGA 227 (415)
T ss_dssp EEEEEEETTSCS-----CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS------CEEE
T ss_pred ceEEEEcCCCCC-----CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC------cccC
Confidence 799999997533 556668999999999999999999999875 99999999877654433322 2346
Q ss_pred EEEcCCCcEEE-EEccCC--eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC-CC--eEEEeeC
Q 038702 85 AIWGWDDSCIF-IGNMTR--TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG-GG--QVYVWTS 153 (154)
Q Consensus 85 ~~~~~~~~~l~-~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~~wd~ 153 (154)
++|+|++++|+ +++.++ .|++||+.+++. ..+..+.. ....++|+| +++.|+.++. ++ .|++||+
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~--~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS--NNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS--CEEEEEECT-TSSEEEEEECTTSSCEEEEEET
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC--cccceEECC-CCCEEEEEECCCCCcEEEEEEC
Confidence 78999999887 666555 499999998775 44544432 236789999 7788877775 45 6777786
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.82 E-value=1e-17 Score=114.30 Aligned_cols=142 Identities=15% Similarity=0.076 Sum_probs=109.4
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEec--cccccceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSG--VNFENTAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~--~~~~~~~~~~~~~~~~~ 78 (154)
+++++.|++|.+||..+++ ..........+..++|+|+++++++++.|++|.+||+ .+.+....+... .
T Consensus 152 ~vs~~~d~~V~v~D~~t~~-----~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g----~ 222 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDSKK-----IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG----I 222 (543)
T ss_dssp EEEEGGGTEEEEEETTTCC-----EEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC----S
T ss_pred EEEEcCCCeEEEEECCCce-----EEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC----C
Confidence 4678889999999998876 3444332223899999999999999999999999999 665554444321 1
Q ss_pred eEeEEEEEEcC----CCcEEEEEc-cCCeEEEecCCCccceeEEeCCC---------cCCcceEEEecCCCccEEEEEcC
Q 038702 79 WISSFRAIWGW----DDSCIFIGN-MTRTVEVISPAQRRSVATLQSPY---------ISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 79 ~~~~~~~~~~~----~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
....++|+| +++++++++ .++.|.+||..+++++..+..+. .......+.++|..+.++++...
T Consensus 223 --~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 223 --EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp --EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred --CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 234678999 999999988 48999999999999988887531 12233678889866678888889
Q ss_pred CCeEEEeeC
Q 038702 145 GGQVYVWTS 153 (154)
Q Consensus 145 d~~i~~wd~ 153 (154)
++.|.+||.
T Consensus 301 ~g~i~vvd~ 309 (543)
T 1nir_A 301 TGKVLLVNY 309 (543)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEEEe
Confidence 999999996
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.80 E-value=1.3e-17 Score=110.55 Aligned_cols=139 Identities=13% Similarity=0.043 Sum_probs=99.6
Q ss_pred CeeecCCC---cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEE-EeeCCCe--EEEEeccccccceeEeecC
Q 038702 1 MATSSTDG---TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLA-TTSFDDT--IGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 1 l~~~~~d~---~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--v~~~~~~~~~~~~~~~~~~ 74 (154)
|++++.++ .|++||+.+++ ...+..|...+.+++|+|+|+.|+ +++.++. |.+||+.+.+......+..
T Consensus 193 la~~s~~~~~~~i~~~d~~tg~-----~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 193 LAYVTFESGRSALVIQTLANGA-----VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCC-----EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred EEEEEecCCCcEEEEEECCCCc-----EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 35566664 89999998765 455668888999999999999887 6666554 9999998766533322221
Q ss_pred CCCceEeEEEEEEcCCCcEEEEEcc-CC--eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC---CeE
Q 038702 75 QTGRWISSFRAIWGWDDSCIFIGNM-TR--TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG---GQV 148 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~i 148 (154)
....++|+|++++|++++. ++ .|++||+.+++.. .+..+. .....++|+| ++++|+.++.+ ..|
T Consensus 268 ------~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~--~~~~~~~~sp-dG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 268 ------NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEG--SQNQDADVSS-DGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp ------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSS--SEEEEEEECT-TSSEEEEEEECSSCEEE
T ss_pred ------cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCC--CcccCeEECC-CCCEEEEEECcCCceEE
Confidence 2346789999998888775 44 6888898887643 333222 2335789999 78888877754 589
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
++||++
T Consensus 338 ~~~d~~ 343 (415)
T 2hqs_A 338 AKQDLA 343 (415)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999974
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.76 E-value=2.4e-17 Score=105.99 Aligned_cols=143 Identities=15% Similarity=0.081 Sum_probs=97.6
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC-CeEEEEecc--ccccceeEeecCCCCc
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD-DTIGIWSGV--NFENTAMIHHNNQTGR 78 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~~~~~~--~~~~~~~~~~~~~~~~ 78 (154)
++++.|+.|++|++..... ........+...+.+++|+|+++++++++.+ +.+.+|++. ++........... .
T Consensus 9 ~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~- 84 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGA--LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-G- 84 (343)
T ss_dssp EEEGGGTEEEEEEECTTSC--EEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-S-
T ss_pred EeCCCCCeEEEEEECCCCc--EEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-C-
Confidence 4557899999999964221 0133344678889999999999988888876 999999997 3332222111111 1
Q ss_pred eEeEEEEEEcCCCcEEEEEc-cCCeEEEecC---CCccceeEEeCCCcCCcceEEEecCCCccEEEEEc-CCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGN-MTRTVEVISP---AQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT-GGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~-~d~~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~~wd~ 153 (154)
....++|+|+++++++++ .++.|.+||+ ...+.+..+..+. .+..++|+| +++++++++ .++.|.+||+
T Consensus 85 --~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 85 --SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---GCHSANISP-DNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp --CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---TBCCCEECT-TSSEEEEEEGGGTEEEEEEE
T ss_pred --CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---CceEEEECC-CCCEEEEecCCCCEEEEEEe
Confidence 123568999999876665 4889999999 4444444444322 235688999 666666665 8999999997
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
+
T Consensus 159 ~ 159 (343)
T 1ri6_A 159 S 159 (343)
T ss_dssp C
T ss_pred c
Confidence 3
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=7.7e-17 Score=113.00 Aligned_cols=132 Identities=11% Similarity=0.038 Sum_probs=94.1
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceee-cccC---CeEEEEEcCCCCEEEEeeCC---------CeEEEEeccccccceeE
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVL-SHKR---AVHSAYFSPSGSSLATTSFD---------DTIGIWSGVNFENTAMI 70 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~---~v~~~~~~~~~~~l~~~~~d---------~~v~~~~~~~~~~~~~~ 70 (154)
.+.||+|++||+.+++. ..+. .|.. .|.+++|||+|++|++++.+ +.+.+||+.+++.....
T Consensus 33 ~~~dg~i~~~d~~~g~~-----~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 33 REQKGTVRLWNVETNTS-----TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp CCSSSCEEEBCGGGCCC-----EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred EeCCCCEEEEECCCCcE-----EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 36789999999988763 3444 4443 49999999999999998764 78889999887652222
Q ss_pred eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCC----------------cceEEEecCC
Q 038702 71 HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISA----------------IPCRFHAHPH 134 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 134 (154)
.. ......+ ..++|+|+|++|++++. +.|++||+.+++.......+.... ....++|+|
T Consensus 108 ~~-~~~~~~~--~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp- 182 (723)
T 1xfd_A 108 PP-EVSNAKL--QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP- 182 (723)
T ss_dssp CT-TCCSCCC--SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-
T ss_pred CC-ccccccc--cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-
Confidence 11 1111112 24579999999998875 799999999888766555433322 115789999
Q ss_pred CccEEEEEcCC
Q 038702 135 QVGTLAGATGG 145 (154)
Q Consensus 135 ~~~~l~~~~~d 145 (154)
+++.|+.++.|
T Consensus 183 Dg~~la~~~~~ 193 (723)
T 1xfd_A 183 DGTRLAYAAIN 193 (723)
T ss_dssp TSSEEEEEEEE
T ss_pred CCCEEEEEEEC
Confidence 88888888754
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=8.2e-17 Score=101.32 Aligned_cols=136 Identities=10% Similarity=0.020 Sum_probs=95.8
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccc-cccceeEeecCCCCceEe
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVN-FENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (154)
.++.|+.|++||+.+++ ...+..|...+.+++|+|++++|++++ ++.|.+||+.+ .+........ ....
T Consensus 17 ~~~~~~~i~~~d~~~~~-----~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~~-- 86 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK-----MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGF--ATIC-- 86 (297)
T ss_dssp -CCCCEEEEEEETTTTE-----EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTT--CCCB--
T ss_pred CCCcceeEEEEeCCCCc-----eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccc--cccc--
Confidence 35678999999998765 455668999999999999999999886 78999999988 6554333211 1111
Q ss_pred EEEEEEcCCCcEEEEEc--cCCe--EEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEE-EEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGN--MTRT--VEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLA-GATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~--~d~~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~~wd~ 153 (154)
...++|+|+++++++++ .++. |..++..+++ ...+..+. . ...++|+| +++.|+ ++..++.+.+|++
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~--~~~~~~sp-dg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-P--SYWHGWSP-DGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-S--EEEEEECT-TSSEEEEEEEETTEEEEEEE
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-C--ccceEECC-CCCEEEEEECCCCceEEEEE
Confidence 22468999999999988 3344 4445555544 33443222 2 35689999 666665 7888999999984
No 135
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=3.5e-17 Score=114.80 Aligned_cols=130 Identities=14% Similarity=-0.016 Sum_probs=91.4
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeec-ccC---CeEEEEEcCCCCEEEEeeC---------CCeEEEEecccccccee
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLS-HKR---AVHSAYFSPSGSSLATTSF---------DDTIGIWSGVNFENTAM 69 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~-~~~---~v~~~~~~~~~~~l~~~~~---------d~~v~~~~~~~~~~~~~ 69 (154)
..+.|+.|++||+.+++ ...+.. |.. .+.+++|||+|++|++++. ++.+++||+.+++....
T Consensus 31 ~~~~d~~i~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~ 105 (719)
T 1z68_A 31 HQSADNNIVLYNIETGQ-----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG 105 (719)
T ss_dssp EECTTSCEEEEESSSCC-----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS
T ss_pred EEcCCCCEEEEEcCCCc-----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc
Confidence 44568999999998876 444453 332 4899999999999998876 78999999988765210
Q ss_pred EeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCc----------------ceEEEecC
Q 038702 70 IHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAI----------------PCRFHAHP 133 (154)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 133 (154)
..... . ...++|+|||+.|+++. ++.|++|++.+++........+...+ ...++|+|
T Consensus 106 ~~l~~----~--~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 106 NELPR----P--IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp SCCCS----S--BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred eecCc----c--cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 00011 1 22468999999999885 78999999988876543322211111 13689999
Q ss_pred CCccEEEEEcCC
Q 038702 134 HQVGTLAGATGG 145 (154)
Q Consensus 134 ~~~~~l~~~~~d 145 (154)
+++.|+.++.|
T Consensus 179 -DG~~la~~~~d 189 (719)
T 1z68_A 179 -NGKFLAYAEFN 189 (719)
T ss_dssp -TSSEEEEEEEE
T ss_pred -CCCEEEEEEEC
Confidence 88999988755
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=3.7e-16 Score=100.27 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=99.9
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeC-CCeEEEEecccccc-ceeEeecCCCCc
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSF-DDTIGIWSGVNFEN-TAMIHHNNQTGR 78 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~~~~~~~~~~-~~~~~~~~~~~~ 78 (154)
+++++.++.|.+||+.+++. ......+...+ .++|+|+++++++++. ++.|.+||+.+.+. .........
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~----~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--- 84 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEI----LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS--- 84 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCE----EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS---
T ss_pred EEEecCCCeEEEEeCcccce----eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC---
Confidence 36788899999999987663 23333445556 9999999997766655 88999999998876 333332221
Q ss_pred eEeEEE-EEEcCCCcEEEEEccCC---eEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCe-EEEee
Q 038702 79 WISSFR-AIWGWDDSCIFIGNMTR---TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQ-VYVWT 152 (154)
Q Consensus 79 ~~~~~~-~~~~~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~-i~~wd 152 (154)
... ++|+|++++++++..++ .|++||+.+++.+..+..+. ....++|+| +++ ++++...++. |.+|+
T Consensus 85 ---~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 85 ---SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY---DAVGIAISP-NGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp ---CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT---TEEEEEECT-TSSCEEEEEETTTTEEEEEE
T ss_pred ---CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC---CccceEECC-CCCEEEEEecCCCceEEEEE
Confidence 113 57999999998655553 89999999998888776432 236789999 665 5555566677 99998
Q ss_pred CC
Q 038702 153 SD 154 (154)
Q Consensus 153 ~~ 154 (154)
++
T Consensus 158 ~~ 159 (331)
T 3u4y_A 158 ID 159 (331)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=1.9e-16 Score=101.56 Aligned_cols=143 Identities=17% Similarity=0.136 Sum_probs=101.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccC---CeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKR---AVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQT 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~ 76 (154)
+++++.++.|.+||+.+++ ......... .+..++|+|+++.+ +++..++.|.+||+.+.+....+......
T Consensus 4 ~v~~~~~~~v~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMA-----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEETTTEEEEEETTTTE-----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEcCCCCeEEEEECCCCc-----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 4788999999999998765 333333333 58899999999765 55566889999999887765444322100
Q ss_pred CceEeEEEEEEcCCCcEEEEEc------------cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC
Q 038702 77 GRWISSFRAIWGWDDSCIFIGN------------MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
........++|+|++++++++. .++.|.+||+.+++.+..+.... . ...++|+| ++++|+++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~--~~~~~~s~-dg~~l~~~-- 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-Q--ITMLAWAR-DGSKLYGL-- 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-S--CCCEEECT-TSSCEEEE--
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-C--cceeEECC-CCCEEEEe--
Confidence 0000112467999999888886 57999999999988877776422 2 24678999 77767666
Q ss_pred CCeEEEeeCC
Q 038702 145 GGQVYVWTSD 154 (154)
Q Consensus 145 d~~i~~wd~~ 154 (154)
++.|.+||++
T Consensus 153 ~~~i~~~d~~ 162 (337)
T 1pby_B 153 GRDLHVMDPE 162 (337)
T ss_dssp SSSEEEEETT
T ss_pred CCeEEEEECC
Confidence 6889999973
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=9.7e-17 Score=110.25 Aligned_cols=131 Identities=11% Similarity=-0.010 Sum_probs=97.1
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC----CeEEEEeccccccceeEeecCCCCceEe
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD----DTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
.++.+.+||+.+++ ...+..+.. .+++|+|+|+++++++.+ ..|.+||+.+++...+..+.. .
T Consensus 130 ~~~~~~l~d~~~g~-----~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~------~ 196 (582)
T 3o4h_A 130 TEDRVALYALDGGG-----LRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG------S 196 (582)
T ss_dssp CSSCEEEEEEETTE-----EEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC------E
T ss_pred CCCCceEEEccCCc-----EEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC------c
Confidence 33445599998765 344444444 889999999999988877 789999998877654332221 2
Q ss_pred EEEEEEcCCCcEEEEEccCC--eEEEecCCCccceeEEeCCCcCCcceEEE--------ecCCCccEEEEEcCCCeEEEe
Q 038702 82 SFRAIWGWDDSCIFIGNMTR--TVEVISPAQRRSVATLQSPYISAIPCRFH--------AHPHQVGTLAGATGGGQVYVW 151 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~d~~i~~w 151 (154)
...++|+|||+.|+++..++ .|++||+.+++.. .+..+.... ..++ |+| ++.++++++.|+++++|
T Consensus 197 ~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~ 272 (582)
T 3o4h_A 197 FSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF--SSYRPTAITWLGYLP-DGRLAVVARREGRSAVF 272 (582)
T ss_dssp EEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH--HHHCCSEEEEEEECT-TSCEEEEEEETTEEEEE
T ss_pred cccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh--hhhhhccccceeEcC-CCcEEEEEEcCCcEEEE
Confidence 34678999999999888888 8999999988876 554433222 2345 999 66889999999999999
Q ss_pred eC
Q 038702 152 TS 153 (154)
Q Consensus 152 d~ 153 (154)
++
T Consensus 273 ~~ 274 (582)
T 3o4h_A 273 ID 274 (582)
T ss_dssp ET
T ss_pred EE
Confidence 85
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.71 E-value=2.8e-16 Score=110.48 Aligned_cols=132 Identities=13% Similarity=0.040 Sum_probs=92.3
Q ss_pred CeeecC-CC-----cEEEEEccCCCCCCCCCceee-ccc------------------------CCeEEEEEcCCCCEEEE
Q 038702 1 MATSST-DG-----TACIWDLRSMATDKPEPTKVL-SHK------------------------RAVHSAYFSPSGSSLAT 49 (154)
Q Consensus 1 l~~~~~-d~-----~v~vw~~~~~~~~~~~~~~~~-~~~------------------------~~v~~~~~~~~~~~l~~ 49 (154)
|++++. |+ .|++||+.+++ ...+. .+. ..+.+++|+|+|++|++
T Consensus 51 la~~~~~d~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 51 VTFLRGKDSDRNQLDLWSYDIGSGQ-----TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp EEEEECCSSCTTEEEEEEEETTTCC-----EEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred EEEEeccCCCCcccEEEEEECCCCc-----eeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 355666 77 89999998765 33333 222 23789999999999999
Q ss_pred eeCCCeEEEEecccc---ccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCC--
Q 038702 50 TSFDDTIGIWSGVNF---ENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISA-- 124 (154)
Q Consensus 50 ~~~d~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-- 124 (154)
++. +.|.+||+.++ .......+.. ....++|+|+|++|++++ ++.|++||+.+++.......+....
T Consensus 126 ~~~-~~i~~~d~~~~~~~~~~~l~~~~~------~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 126 PLG-GELYLYDLKQEGKAAVRQLTHGEG------FATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EET-TEEEEEESSSCSTTSCCBCCCSSS------CEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EeC-CcEEEEECCCCCcceEEEcccCCc------ccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceec
Confidence 886 89999999887 4333322211 234678999999999887 5699999999877654433222111
Q ss_pred ------------cceEEEecCCCccEEEEEcCCC
Q 038702 125 ------------IPCRFHAHPHQVGTLAGATGGG 146 (154)
Q Consensus 125 ------------~~~~~~~~~~~~~~l~~~~~d~ 146 (154)
....++|+| ++++|++++.|+
T Consensus 198 g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~ 230 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDE 230 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEEC
T ss_pred cccceeeeeccccccceEECC-CCCEEEEEEEcC
Confidence 024689999 888888887665
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.70 E-value=5.2e-15 Score=95.07 Aligned_cols=147 Identities=16% Similarity=0.142 Sum_probs=93.8
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee-CCCeEEEEeccc-cccceeE--eecCCCCc
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVN-FENTAMI--HHNNQTGR 78 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~-~~~~~~~--~~~~~~~~ 78 (154)
++..++.|.+||+..+.. ............+.+++|+|+++++++++ .++.|.+||+.+ .+..... ......+.
T Consensus 101 ~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGLP--VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EETTTTEEEEEEEETTEE--EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred EecCCCeEEEEECCCCcc--ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 445588999999952211 00233334455689999999999888877 899999999987 4332211 11111121
Q ss_pred eEeEEEEEEcCCCcEEEEE-ccCCeEEEecCCC--ccc--eeEEeC---C-CcCCcceEEEecCCCccEEE-EEcCCCeE
Q 038702 79 WISSFRAIWGWDDSCIFIG-NMTRTVEVISPAQ--RRS--VATLQS---P-YISAIPCRFHAHPHQVGTLA-GATGGGQV 148 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~-~~d~~i~i~~~~~--~~~--~~~~~~---~-~~~~~~~~~~~~~~~~~~l~-~~~~d~~i 148 (154)
....++|+|++++++++ ..++.+++|++.. ++. ...+.. . .....+..++|+| ++++|+ ++..++.|
T Consensus 179 --~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i 255 (343)
T 1ri6_A 179 --GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLI 255 (343)
T ss_dssp --CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEE
T ss_pred --CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCEE
Confidence 22357899999976554 5889999999953 432 222221 1 1122335689999 665554 66689999
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
.+||++
T Consensus 256 ~v~d~~ 261 (343)
T 1ri6_A 256 TVFSVS 261 (343)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999974
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=6.6e-15 Score=95.67 Aligned_cols=148 Identities=11% Similarity=0.027 Sum_probs=94.8
Q ss_pred eeecCCCcEEEEEccCCCC----C-CCC----CceeecccCCeEEEEEcCCCCEEEEee-CCCeEEEEeccccccceeEe
Q 038702 2 ATSSTDGTACIWDLRSMAT----D-KPE----PTKVLSHKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFENTAMIH 71 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~----~-~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~~~~~~ 71 (154)
+++..++.|++|++..... . ... ......+......++|+|+|+++++++ .++.|.+|++.++.......
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 3455678999999875432 1 000 011224456678999999999887777 68999999998654322221
Q ss_pred ecCCCCceEeEEEEEEcCCCcEEEEEccC--CeEEEecCC--Ccc--ceeEEeCCCcCCcceEEEecCCCccEEEEEc-C
Q 038702 72 HNNQTGRWISSFRAIWGWDDSCIFIGNMT--RTVEVISPA--QRR--SVATLQSPYISAIPCRFHAHPHQVGTLAGAT-G 144 (154)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~i~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 144 (154)
.............++|+|++++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+| ++++|++++ .
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~sp-dg~~l~~~~~~ 326 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITP-NGKYLLVACRD 326 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECT-TSCEEEEEETT
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECC-CCCEEEEEECC
Confidence 11111111122467899999988776654 899999985 344 3334433 22335789999 777776666 6
Q ss_pred CCeEEEeeC
Q 038702 145 GGQVYVWTS 153 (154)
Q Consensus 145 d~~i~~wd~ 153 (154)
++.|.+|++
T Consensus 327 ~~~v~v~~~ 335 (361)
T 3scy_A 327 TNVIQIFER 335 (361)
T ss_dssp TTEEEEEEE
T ss_pred CCCEEEEEE
Confidence 799999754
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.69 E-value=4.7e-16 Score=108.89 Aligned_cols=142 Identities=18% Similarity=0.186 Sum_probs=99.4
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccc-----cccceeEeecCCC---C
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVN-----FENTAMIHHNNQT---G 77 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~-----~~~~~~~~~~~~~---~ 77 (154)
.++.+++||+.+++ ...+..+...+.+++|+|+|+.|+++ .++.|.+|++.+ ++........... +
T Consensus 99 ~~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g 172 (706)
T 2z3z_A 99 TQGGLVGFDMLARK-----VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYG 172 (706)
T ss_dssp ETTEEEEEETTTTE-----EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEES
T ss_pred ECCEEEEEECCCCc-----eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcc
Confidence 46899999998764 45555677789999999999999885 789999999987 5544322211110 0
Q ss_pred ------ceEeEEEEEEcCCCcEEEEEc---------------------------------cCCeEEEecCCCccceeEEe
Q 038702 78 ------RWISSFRAIWGWDDSCIFIGN---------------------------------MTRTVEVISPAQRRSVATLQ 118 (154)
Q Consensus 78 ------~~~~~~~~~~~~~~~~l~~~~---------------------------------~d~~i~i~~~~~~~~~~~~~ 118 (154)
+.-....+.|+|||++|++++ .+..|++||+.+++......
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc
Confidence 000012568999999999987 34679999999887544332
Q ss_pred CCCcCCcceEEEecCCCccEEEEEcCCC-----eEEEeeCC
Q 038702 119 SPYISAIPCRFHAHPHQVGTLAGATGGG-----QVYVWTSD 154 (154)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~ 154 (154)
..........++|+| +++.|++++.++ .|++||++
T Consensus 253 ~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp CSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETT
T ss_pred CCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECC
Confidence 211222336789999 888888877665 89999873
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=8.9e-15 Score=94.45 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=102.5
Q ss_pred cCCCcEEEEEccCCCCCCCCCceeec-ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVLS-HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
..++.|.+||..+++ ...... +...+..++|+|+++.+++++.++.+.+||..+.+.......... +......
T Consensus 161 ~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~ 234 (353)
T 3vgz_A 161 GKESVIWVVDGGNIK-----LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD-GKEHFFI 234 (353)
T ss_dssp SSSCEEEEEETTTTE-----EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS-SSCCCEE
T ss_pred CCCceEEEEcCCCCc-----eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC-CCCcccc
Confidence 357889999998765 333343 566688999999999999999999999999998776654443111 1111233
Q ss_pred EEEEcCCCcEEEEEcc-CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeCC
Q 038702 84 RAIWGWDDSCIFIGNM-TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~~ 154 (154)
.++|+|++++++.++. ++.|.+||..+++.+..+..... ..++++| +++ ++++...++.|.+||++
T Consensus 235 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~~~~s~-dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES----LAVLFNP-ARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp EEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC----CCEEEET-TTTEEEEEETTTTEEEEEETT
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC----ceEEECC-CCCEEEEEECCCCeEEEEECC
Confidence 5789999997766654 58999999999998888774331 3578999 556 55666689999999973
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=2e-14 Score=92.86 Aligned_cols=143 Identities=8% Similarity=0.056 Sum_probs=101.3
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccC---------CeEEEEEcCCCCEEEEee--CCCeEEEEeccccccceeE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKR---------AVHSAYFSPSGSSLATTS--FDDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~v~~~~~~~~~~~~~~ 70 (154)
++...++.|.+||..+++. ...+..+.. .+.++.|+|+++++++++ .++.|.+||..+.+....+
T Consensus 105 v~~~~~~~v~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp EEETTTTEEEEEETTTCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEecCCCEEEEEeCCCCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 4566688999999987653 222222221 278899999999877766 4789999999887766554
Q ss_pred eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc--CCcceEEEecCCCccEE-EEEcCCCe
Q 038702 71 HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI--SAIPCRFHAHPHQVGTL-AGATGGGQ 147 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l-~~~~~d~~ 147 (154)
...... ...++|+|+++++++++.++.|.+||..+++.+..+..... ......++++| +++++ ++...++.
T Consensus 181 ~~~~~~-----~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 181 QNTGKM-----STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAE 254 (353)
T ss_dssp CCCCTT-----CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSE
T ss_pred cCCCCc-----cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCE
Confidence 411111 12457899999999999999999999999988877764221 22335689999 56655 44456699
Q ss_pred EEEeeCC
Q 038702 148 VYVWTSD 154 (154)
Q Consensus 148 i~~wd~~ 154 (154)
|.+||++
T Consensus 255 v~~~d~~ 261 (353)
T 3vgz_A 255 VLVVDTR 261 (353)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999973
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.68 E-value=1.4e-15 Score=98.06 Aligned_cols=141 Identities=16% Similarity=0.039 Sum_probs=94.5
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccC--CeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCC-
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKR--AVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQT- 76 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~- 76 (154)
+++++.++.|++||+.+++ ......... .+..++|+|+++.++ +...++.|.+||+.+.+...........
T Consensus 14 ~v~~~~~~~v~~~d~~~~~-----~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDT-----VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp EEEEETTTEEEEEETTTTE-----EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred EEEeCCCCeEEEEECCCCc-----EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 4678899999999998765 333333233 678999999998654 5557899999999887665444321100
Q ss_pred CceEeEEEEEEcCCCcEEEEEccC------------CeEEEecCCCccc---eeEEeCCCcCCcceEEEecCCCccEEEE
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMT------------RTVEVISPAQRRS---VATLQSPYISAIPCRFHAHPHQVGTLAG 141 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d------------~~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 141 (154)
........++|+|+++++++++.+ +.|.+||+.+++. +..+..+. . ...++|+| +++ ++.
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~--~~~~~~s~-dg~-l~~ 163 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-Q--VYLMRAAD-DGS-LYV 163 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-S--CCCEEECT-TSC-EEE
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-c--ccceeECC-CCc-EEE
Confidence 000111246799999999998866 8999999988543 33443322 2 25678999 667 444
Q ss_pred EcCCCeEEEeeC
Q 038702 142 ATGGGQVYVWTS 153 (154)
Q Consensus 142 ~~~d~~i~~wd~ 153 (154)
++. .|.+||+
T Consensus 164 ~~~--~i~~~d~ 173 (349)
T 1jmx_B 164 AGP--DIYKMDV 173 (349)
T ss_dssp ESS--SEEEECT
T ss_pred ccC--cEEEEeC
Confidence 443 3999986
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=6.4e-15 Score=94.46 Aligned_cols=136 Identities=11% Similarity=0.098 Sum_probs=97.8
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecC--------C--
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN--------Q-- 75 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~--------~-- 75 (154)
.++.|.+||+.+++ ..........+.+++|+|++++++++ ++.+.+||+.+.+......... +
T Consensus 113 ~~~~i~v~d~~~~~-----~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg 185 (337)
T 1pby_B 113 QPTRVALYDAETLS-----RRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDV 185 (337)
T ss_dssp CCCEEEEEETTTTE-----EEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBC
T ss_pred cCceEEEEECCCCc-----EEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCc
Confidence 46899999997654 33344445668889999999988887 6889999998765432221100 0
Q ss_pred ------------------------------------------CCce---------EeEEEEEEcCCCcEEEEEccCCeEE
Q 038702 76 ------------------------------------------TGRW---------ISSFRAIWGWDDSCIFIGNMTRTVE 104 (154)
Q Consensus 76 ------------------------------------------~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~ 104 (154)
.+.. .....++|+|++++++++ ++.|+
T Consensus 186 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~ 263 (337)
T 1pby_B 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLE 263 (337)
T ss_dssp CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEE
T ss_pred cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEE
Confidence 0000 012247899999999888 79999
Q ss_pred EecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 105 VISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+||+.+++.+..+..+. ....++|+| ++++|++++.++.|.+||++
T Consensus 264 ~~d~~~~~~~~~~~~~~---~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 264 SFDLEKNASIKRVPLPH---SYYSVNVST-DGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEETTTTEEEEEEECSS---CCCEEEECT-TSCEEEEESBSSEEEEEETT
T ss_pred EEECCCCcCcceecCCC---ceeeEEECC-CCCEEEEEcCCCcEEEEECc
Confidence 99999998887776432 225789999 77888888889999999973
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.66 E-value=2.1e-14 Score=98.12 Aligned_cols=145 Identities=11% Similarity=0.046 Sum_probs=102.6
Q ss_pred CeeecCCCcEEEEEc--cCCCCCCCCCceeecccCCeEEEEEcC----CCCEEEEeeC-CCeEEEEeccccccceeEeec
Q 038702 1 MATSSTDGTACIWDL--RSMATDKPEPTKVLSHKRAVHSAYFSP----SGSSLATTSF-DDTIGIWSGVNFENTAMIHHN 73 (154)
Q Consensus 1 l~~~~~d~~v~vw~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~ 73 (154)
|++++.|+.|++||+ .+.+ ......+...+..++|+| +|+++++++. +++|.+||..+.+....+...
T Consensus 193 l~v~~~d~~V~v~D~~~~t~~-----~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 193 LLVIGRDARIDMIDLWAKEPT-----KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp EEEEETTSEEEEEETTSSSCE-----EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred EEEECCCCeEEEEECcCCCCc-----EEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 467788899999999 5543 344445666789999999 9999999885 899999999888776555321
Q ss_pred CC--CC----ceEeEEEEEEcCCCc-EEEEEccCCeEEEecCCCcccee--EEeCCCcCCcceEEEecCCCccEE-EEEc
Q 038702 74 NQ--TG----RWISSFRAIWGWDDS-CIFIGNMTRTVEVISPAQRRSVA--TLQSPYISAIPCRFHAHPHQVGTL-AGAT 143 (154)
Q Consensus 74 ~~--~~----~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 143 (154)
.. .. ..-....+.++|++. ++++...++.|.+||..+.+.+. .+. + ......+.|+| ++++| +++.
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~--~~~~~~~~~sp-dg~~l~va~~ 343 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A--APFLHDGGWDS-SHRYFMTAAN 343 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C--CSSCCCEEECT-TSCEEEEEEG
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c--CcCccCceECC-CCCEEEEEec
Confidence 10 00 000234567899765 56677788999999999876654 333 2 22235789999 67765 4556
Q ss_pred CCCeEEEeeCC
Q 038702 144 GGGQVYVWTSD 154 (154)
Q Consensus 144 ~d~~i~~wd~~ 154 (154)
.+++|.+||++
T Consensus 344 ~~~~v~v~D~~ 354 (543)
T 1nir_A 344 NSNKVAVIDSK 354 (543)
T ss_dssp GGTEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 78999999973
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.66 E-value=1.5e-14 Score=92.75 Aligned_cols=135 Identities=8% Similarity=0.063 Sum_probs=92.5
Q ss_pred cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEe-eCCCe-EEEEeccccccceeE-eecCCCCceEeEEEE
Q 038702 9 TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATT-SFDDT-IGIWSGVNFENTAMI-HHNNQTGRWISSFRA 85 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (154)
.|.+||+.+++ ......+.....+++|+|+|++++++ ..++. +.+|++......... ......+. ....+
T Consensus 109 ~i~v~d~~~~~-----~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~--~~~~~ 181 (331)
T 3u4y_A 109 NMQSYSFLKNK-----FISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGT--RPFNI 181 (331)
T ss_dssp EEEEEETTTTE-----EEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSS--SEEEE
T ss_pred cEEEEECCCCC-----eEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCC--Cccce
Confidence 89999998765 34445555667999999999865555 55578 999998764433211 11001111 13467
Q ss_pred EEcCCCcEEEE-EccCCeEEEecCCCccc---eeEEeCCCcCCcceEEEecCCCccEEE-EEcCCCeEEEeeCC
Q 038702 86 IWGWDDSCIFI-GNMTRTVEVISPAQRRS---VATLQSPYISAIPCRFHAHPHQVGTLA-GATGGGQVYVWTSD 154 (154)
Q Consensus 86 ~~~~~~~~l~~-~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~~wd~~ 154 (154)
+|+|++++++. +..++.|++||+.+++. +..+..+ ..+..++++| ++++++ +...++.|.+||++
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSR-DGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECT-TSSEEEEECSSEEEEEEEETT
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECC-CCCEEEEEEcCCCEEEEEECC
Confidence 89999986544 55688999999999888 7666633 2235689999 777554 44567889999973
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.66 E-value=4.4e-15 Score=108.08 Aligned_cols=137 Identities=10% Similarity=-0.053 Sum_probs=101.7
Q ss_pred eeecCCCcEE-EEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEe-ecCCCCce
Q 038702 2 ATSSTDGTAC-IWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIH-HNNQTGRW 79 (154)
Q Consensus 2 ~~~~~d~~v~-vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~~~~ 79 (154)
+.++.++.+. +|++..+. ...+.+|...+..++|+|+|++|++++.++.+++||+.+++...... +.. .
T Consensus 352 ~~~s~~~~l~~~~d~~~~~-----~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~----~ 422 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGK-----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA----M 422 (1045)
T ss_dssp EEEETTEEEEEEEETTTCC-----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS----C
T ss_pred EEEECCCceEEEEECCCCC-----ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC----C
Confidence 3445566677 88887654 33334778899999999999999999999999999999877655542 221 1
Q ss_pred EeEEEEEEcCCCcEEEEEccCC----------eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTR----------TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~----------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
...++|+|+|++|++++.++ .|++||+.+++ +..+..+.... ..++|+| ++++|+.++.++...
T Consensus 423 --v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~--~~~~~sp-dG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 423 --ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD--YAPAFDA-DSKNLYYLSYRSLDP 496 (1045)
T ss_dssp --CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE--EEEEECT-TSCEEEEEESCCCCC
T ss_pred --ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCccc--CCceEcC-CCCEEEEEecccCCc
Confidence 12568999999998887654 89999999877 55555443222 5688999 888998888877777
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
+|+.
T Consensus 497 ~~~~ 500 (1045)
T 1k32_A 497 SPDR 500 (1045)
T ss_dssp EECS
T ss_pred Ccch
Confidence 7753
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=9.6e-15 Score=91.83 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=89.8
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
.++...||.++.... ......+...+..++|+|+++.++ ++..++.+++|++........... .... ....
T Consensus 106 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~--~~~~ 177 (297)
T 2ojh_A 106 EFGKSAIYLLPSTGG----TPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT--HGEG--RNDG 177 (297)
T ss_dssp TTSSCEEEEEETTCC----CCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC--CSSS--CEEE
T ss_pred CCCcceEEEEECCCC----ceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc--cCCC--cccc
Confidence 335666666643322 223333344589999999999877 777899999999753322111111 1111 2346
Q ss_pred EEEcCCCcEEEEEc-cCCeEEEecCC-CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----------CeEEEe
Q 038702 85 AIWGWDDSCIFIGN-MTRTVEVISPA-QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----------GQVYVW 151 (154)
Q Consensus 85 ~~~~~~~~~l~~~~-~d~~i~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------~~i~~w 151 (154)
+.|+|++++++.++ .++.+++|++. .+..+..+..+.. ....++|+| ++++|+.++.+ +.|++|
T Consensus 178 ~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY--GDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE--EEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc--ccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 78999999887665 58899999886 4555556654432 235789999 78888877765 569999
Q ss_pred eCC
Q 038702 152 TSD 154 (154)
Q Consensus 152 d~~ 154 (154)
|++
T Consensus 255 d~~ 257 (297)
T 2ojh_A 255 DMD 257 (297)
T ss_dssp ETT
T ss_pred ecC
Confidence 873
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.65 E-value=4.6e-14 Score=91.23 Aligned_cols=148 Identities=9% Similarity=0.063 Sum_probs=91.1
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEE-eeCCCeEEEEeccc--cccceeEee-cCCC
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLAT-TSFDDTIGIWSGVN--FENTAMIHH-NNQT 76 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~-~~~d~~v~~~~~~~--~~~~~~~~~-~~~~ 76 (154)
++...++.|++|++..... ........ .....+..++|+|+|+++++ ...++.+.+|++.. ++....... ....
T Consensus 156 v~~~~~~~v~~~~~~~~g~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQ-LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp EEETTTTEEEEEEECTTSC-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred EEeCCCCEEEEEEECCCCc-EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC
Confidence 4556688999999983221 00011111 22346788999999996655 56788999999875 222111111 1110
Q ss_pred --CceEeEEEEEEcCCCcEEE-EEccCCeEEEecCCCc---cceeEEeCCCcCCcceEEEecCCCccEEEEEc-CCCeEE
Q 038702 77 --GRWISSFRAIWGWDDSCIF-IGNMTRTVEVISPAQR---RSVATLQSPYISAIPCRFHAHPHQVGTLAGAT-GGGQVY 149 (154)
Q Consensus 77 --~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~ 149 (154)
........++|+|+|++|+ +...++.|.+|++... +.+..+..+. ..+..++|+| ++++|++++ .++.|.
T Consensus 235 ~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~sp-dg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG--DFPRDFDLDP-TEAFVVVVNQNTDNAT 311 (347)
T ss_dssp TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS--SCCCEEEECT-TSSEEEEEETTTTEEE
T ss_pred CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC--CCcCeEEECC-CCCEEEEEEcCCCcEE
Confidence 0011344678999999875 4456899999999732 3344444322 2235789999 777776665 458999
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
+|++
T Consensus 312 v~~~ 315 (347)
T 3hfq_A 312 LYAR 315 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9954
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.64 E-value=9e-15 Score=102.93 Aligned_cols=147 Identities=15% Similarity=0.126 Sum_probs=98.1
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCC---C-
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQT---G- 77 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~---~- 77 (154)
++++. +.|++||+.++... ....+..|...+..++|+|+|++|++++ ++.|.+||+.+++........... +
T Consensus 124 ~~~~~-~~i~~~d~~~~~~~--~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~ 199 (741)
T 2ecf_A 124 LFPLG-GELYLYDLKQEGKA--AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGI 199 (741)
T ss_dssp EEEET-TEEEEEESSSCSTT--SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESC
T ss_pred EEEeC-CcEEEEECCCCCcc--eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccc
Confidence 33443 88999999876200 0445557888899999999999999887 468999999876544332211100 0
Q ss_pred -ceE------eEEEEEEcCCCcEEEEEccCC---------------------------------eEEEecCCC-ccceeE
Q 038702 78 -RWI------SSFRAIWGWDDSCIFIGNMTR---------------------------------TVEVISPAQ-RRSVAT 116 (154)
Q Consensus 78 -~~~------~~~~~~~~~~~~~l~~~~~d~---------------------------------~i~i~~~~~-~~~~~~ 116 (154)
.++ ....+.|+|||++|++++.|+ .|++||+.+ ++....
T Consensus 200 ~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 279 (741)
T 2ecf_A 200 AEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWI 279 (741)
T ss_dssp CCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEE
T ss_pred cceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEe
Confidence 000 012468999999999988765 789999988 775543
Q ss_pred EeCCCcCCcceEEEecCCCccEEEEEcC-----CCeEEEeeCC
Q 038702 117 LQSPYISAIPCRFHAHPHQVGTLAGATG-----GGQVYVWTSD 154 (154)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~ 154 (154)
............++| | +++.|+.++. +..|++||++
T Consensus 280 ~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 280 DLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp CCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETT
T ss_pred cCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECC
Confidence 322111223367899 8 7888876543 5689999863
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=2.4e-14 Score=92.58 Aligned_cols=143 Identities=9% Similarity=0.019 Sum_probs=92.8
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee-CCCeEEEEeccccccceeEe---ecCCC----Cc
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFENTAMIH---HNNQT----GR 78 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~~~~~~---~~~~~----~~ 78 (154)
++.|.+|++..+... .......+...+..++|+|++++|++++ .++.+.+|++.......... ..... ..
T Consensus 62 ~~~v~~~~~~~g~~~--~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~ 139 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAH--KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQD 139 (347)
T ss_dssp EEEEEEEEEETTEEE--EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCS
T ss_pred CceEEEEEecCCcEE--EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCcccc
Confidence 689999999654320 0122235777889999999999888887 68999999996432222211 11100 00
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCC-Ccccee--EEeCCCcCCcceEEEecCCCccE-EEEEcCCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPA-QRRSVA--TLQSPYISAIPCRFHAHPHQVGT-LAGATGGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~~wd~ 153 (154)
......++|+|+++++++...++.|++|++. +++... .+..+. ...+..++|+| ++++ +++...++.|.+|++
T Consensus 140 ~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~ 216 (347)
T 3hfq_A 140 GSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRHLVFSP-DGQYAFLAGELSSQIASLKY 216 (347)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT-TCCEEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC-CCCCceEEECC-CCCEEEEEeCCCCEEEEEEe
Confidence 1123357899999976777778899999998 444322 222222 22235789999 7774 555678899999986
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.64 E-value=6.9e-15 Score=107.09 Aligned_cols=133 Identities=11% Similarity=-0.021 Sum_probs=101.8
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccC-CeEEEEEcCCCCEEEEeeCCCeEE-EEeccccccceeEeecCCCCceEeEEE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKR-AVHSAYFSPSGSSLATTSFDDTIG-IWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
++.+.+|++..+. ...+..|.. .+..++|+ +|+.+++++.+..+. +|++.+.+......+ . .....
T Consensus 316 ~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~----~--~~~~~ 383 (1045)
T 1k32_A 316 RGQAFIQDVSGTY-----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEEN----L--GNVFA 383 (1045)
T ss_dssp TTEEEEECTTSSB-----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCC----C--CSEEE
T ss_pred cCEEEEEcCCCCc-----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCC----c--cceee
Confidence 6789999987654 334446777 89999999 999999998888888 889877654332211 1 13346
Q ss_pred EEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC----------CeEEEeeCC
Q 038702 85 AIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG----------GQVYVWTSD 154 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------~~i~~wd~~ 154 (154)
++|+|++++|++++.++.|++||+.+++....+..+.... ..++|+| ++++|++++.+ +.|++||++
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v--~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI--TDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC--CCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc--cceEECC-CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 7899999999999999999999999998777765554433 4689999 88888887764 489999974
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.63 E-value=5.3e-14 Score=90.65 Aligned_cols=137 Identities=13% Similarity=0.028 Sum_probs=94.1
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecC--C---------
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN--Q--------- 75 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~--~--------- 75 (154)
++.|.+||+.+++... ......+...+.+++|+|+++ +++++. .|.+||+.+.+....+.... .
T Consensus 124 ~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAK--PVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBC--CSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccc--eeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccce
Confidence 4899999998743211 233445556789999999999 555543 49999998766543332110 0
Q ss_pred --------CCce--------------------------------------------EeEEEEEEcC-CCcEEEEEccCCe
Q 038702 76 --------TGRW--------------------------------------------ISSFRAIWGW-DDSCIFIGNMTRT 102 (154)
Q Consensus 76 --------~~~~--------------------------------------------~~~~~~~~~~-~~~~l~~~~~d~~ 102 (154)
.... .....++++| ++++++++ ++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~ 276 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR 276 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe
Confidence 0000 0123456789 99998888 889
Q ss_pred EEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 103 VEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 103 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
|.+||+.+++.+..+.... . ...++++| ++++|++++.++.|.+||++
T Consensus 277 v~~~d~~~~~~~~~~~~~~-~--~~~~~~s~-dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 277 LAKYDLKQRKLIKAANLDH-T--YYCVAFDK-KGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEEETTTTEEEEEEECSS-C--CCEEEECS-SSSCEEEESBSSEEEEEETT
T ss_pred EEEEECccCeEEEEEcCCC-C--ccceEECC-CCCEEEEecCCCeEEEEecc
Confidence 9999999998887776432 2 24789999 67777778888999999974
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.62 E-value=1e-14 Score=102.15 Aligned_cols=126 Identities=9% Similarity=-0.045 Sum_probs=83.3
Q ss_pred eeecCCCcEEEEEccCCCCCCCCC-ceeeccc-----------------CCeEEEEEcCCCCEEEEeeCCCeEEEEeccc
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEP-TKVLSHK-----------------RAVHSAYFSPSGSSLATTSFDDTIGIWSGVN 63 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~ 63 (154)
++++.|+ | +||+.+++. . ..+..+. ..|.+++|+|+ ..++.+ .++.+.+||+.+
T Consensus 39 ~~~~~~~-i-~~d~~tg~~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~ 110 (706)
T 2z3z_A 39 VFIEGDD-L-VFNKANGKS----AQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLA 110 (706)
T ss_dssp EEEETTE-E-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTT
T ss_pred EEEeCCc-E-EEECCCCcE----eeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCC
Confidence 4556677 8 999988763 1 3344433 56999999999 665555 459999999988
Q ss_pred cccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCC-----ccceeEEeCCCcCC------------cc
Q 038702 64 FENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ-----RRSVATLQSPYISA------------IP 126 (154)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~~~~------------~~ 126 (154)
++......+... + ..++|+|+|++|+++ .++.|++|++.+ ++.......+.... ..
T Consensus 111 ~~~~~l~~~~~~----~--~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~ 183 (706)
T 2z3z_A 111 RKVTYLFDTNEE----T--ASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIE 183 (706)
T ss_dssp TEEEEEECCTTC----C--TTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCC
T ss_pred CceEEccCCccc----c--cCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCC
Confidence 765444333221 1 245799999999885 789999999988 76654433322211 02
Q ss_pred eEEEecCCCccEEEEEc
Q 038702 127 CRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 127 ~~~~~~~~~~~~l~~~~ 143 (154)
..+.|+| ++++|++++
T Consensus 184 ~~~~~Sp-Dg~~la~~~ 199 (706)
T 2z3z_A 184 KGTFWSP-KGSCLAFYR 199 (706)
T ss_dssp CSEEECT-TSSEEEEEE
T ss_pred ceEEECC-CCCEEEEEE
Confidence 5689999 889998887
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.60 E-value=2.5e-14 Score=100.43 Aligned_cols=143 Identities=9% Similarity=0.039 Sum_probs=96.5
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE------
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI------ 80 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~------ 80 (154)
++.+.+||+.+++... .....+|...+..++|||+|+.|+.++. +.|.+||+.+++.......... ....
T Consensus 90 ~~~i~~~d~~~~~~~~--l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~-~~~~~g~~~~ 165 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQS--LDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE-GVIYNGLSDW 165 (723)
T ss_dssp CSEEEEEESSSCCCEE--CCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT-TTEEEEECCH
T ss_pred eeeEEEEECCCCceEe--ccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC-CceECcccce
Confidence 4788999998765200 1111145556889999999999999876 7899999988766544332111 0000
Q ss_pred --------eEEEEEEcCCCcEEEEEccCC----------------------------------eEEEecCCCccceeEEe
Q 038702 81 --------SSFRAIWGWDDSCIFIGNMTR----------------------------------TVEVISPAQRRSVATLQ 118 (154)
Q Consensus 81 --------~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~~~~~~~~~~~~~ 118 (154)
....+.|+|||++|++++.++ .|++||+.+++....+.
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~ 245 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM 245 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee
Confidence 113578999999999987653 79999999887656665
Q ss_pred CCC----cCCcceEEEecCCCccEEEEEc----CCCeEEEeeCC
Q 038702 119 SPY----ISAIPCRFHAHPHQVGTLAGAT----GGGQVYVWTSD 154 (154)
Q Consensus 119 ~~~----~~~~~~~~~~~~~~~~~l~~~~----~d~~i~~wd~~ 154 (154)
.+. .......++|+| +++++++.. .+..|++||++
T Consensus 246 ~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 246 PPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp CCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCC
Confidence 431 122236789999 778876654 33679999863
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.59 E-value=8.5e-13 Score=85.76 Aligned_cols=148 Identities=15% Similarity=0.162 Sum_probs=92.3
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeec-----------ccCCeEEEEEcCCCCEEEEee-CCCeEEEEecccccc----
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLS-----------HKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFEN---- 66 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~---- 66 (154)
+...++.|.+|++....... ....... +...+.+++|+|+|+++++++ .++.+.+|++.....
T Consensus 115 ~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~ 193 (361)
T 3scy_A 115 ANYSGGSITVFPIGQDGALL-PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNK 193 (361)
T ss_dssp EETTTTEEEEEEBCTTSCBC-SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred EECCCCEEEEEEeCCCCcCc-ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc
Confidence 34468899999997543211 1111111 123458899999999766655 588999999876542
Q ss_pred --ceeE----eecCCCCceEeEEEEEEcCCCcEEEEEc-cCCeEEEecCCCccc--eeEEeCCCc-CCcceEEEecCCCc
Q 038702 67 --TAMI----HHNNQTGRWISSFRAIWGWDDSCIFIGN-MTRTVEVISPAQRRS--VATLQSPYI-SAIPCRFHAHPHQV 136 (154)
Q Consensus 67 --~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 136 (154)
.... ......+. ....++|+|+++++++++ .++.|++|++.+++. +..+..... ......++|+| ++
T Consensus 194 ~~l~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg 270 (361)
T 3scy_A 194 EKFLTKGTPEAFKVAPGS--GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DG 270 (361)
T ss_dssp CCCEEEEEEEEEECCTTC--CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TS
T ss_pred cceeecccccceecCCCC--CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CC
Confidence 2111 11111111 123578999999887766 689999999986643 333332111 12235789999 77
Q ss_pred cEEEEEcC--CCeEEEeeCC
Q 038702 137 GTLAGATG--GGQVYVWTSD 154 (154)
Q Consensus 137 ~~l~~~~~--d~~i~~wd~~ 154 (154)
++|+++.. ++.|.+|+++
T Consensus 271 ~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 271 KYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp SEEEEEECSSSCEEEEEEEC
T ss_pred CEEEEECCCCCCEEEEEEEc
Confidence 87755554 5899999873
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=1.9e-12 Score=84.40 Aligned_cols=141 Identities=6% Similarity=0.001 Sum_probs=89.7
Q ss_pred CCCcEEEEEccCCCCCCCCCceee-----cccCCeEEEEEcCCCCEEEEeeC-CCeEEEEecc-ccccceeEeecCC-CC
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVL-----SHKRAVHSAYFSPSGSSLATTSF-DDTIGIWSGV-NFENTAMIHHNNQ-TG 77 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~-d~~v~~~~~~-~~~~~~~~~~~~~-~~ 77 (154)
.++.+.+|++..... ..... .+...+.+++|+|+|++++++.. ++.|.+|++. +++.......... .+
T Consensus 117 ~~g~v~v~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 117 FAGYGNVFSVSETGK----LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp SCCEEEEEEECTTCC----EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred CCceEEEEccCCCCc----CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 688999999974321 22111 24568999999999998887654 6899999998 5543222111111 12
Q ss_pred ceEeEEEEEEcCCCcEEEEEcc-CCeEEEecCC--Cccce---eEEeCCC---cC-C-------cceEEE-ecCCCccEE
Q 038702 78 RWISSFRAIWGWDDSCIFIGNM-TRTVEVISPA--QRRSV---ATLQSPY---IS-A-------IPCRFH-AHPHQVGTL 139 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~-d~~i~i~~~~--~~~~~---~~~~~~~---~~-~-------~~~~~~-~~~~~~~~l 139 (154)
. ....++|+|+|+++++++. ++.|.+|++. +++.. ..+.... .. . ....++ ++| ++++|
T Consensus 193 ~--~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l 269 (365)
T 1jof_A 193 D--HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYM 269 (365)
T ss_dssp C--CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEE
T ss_pred C--CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEE
Confidence 1 2335689999998877764 6899998764 45542 1222111 01 1 246788 999 77777
Q ss_pred EEEcC-CC-----eEEEeeC
Q 038702 140 AGATG-GG-----QVYVWTS 153 (154)
Q Consensus 140 ~~~~~-d~-----~i~~wd~ 153 (154)
++++. +. .|.+|++
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEE
T ss_pred EEECCCCCCCCCCeEEEEEE
Confidence 66553 23 8999986
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.55 E-value=3.8e-14 Score=100.03 Aligned_cols=125 Identities=10% Similarity=-0.014 Sum_probs=85.9
Q ss_pred CCcEEEEEccCCCCCCCCCceee-cccC-----CeEEEEEcCCCCEEEEeeCC---------CeEEEEeccccccceeEe
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL-SHKR-----AVHSAYFSPSGSSLATTSFD---------DTIGIWSGVNFENTAMIH 71 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~-~~~~-----~v~~~~~~~~~~~l~~~~~d---------~~v~~~~~~~~~~~~~~~ 71 (154)
|+.|++||+.+++. ..+. +|.. ....+.|||+|++++.++.+ +.+.+||+.+++...+..
T Consensus 35 ~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 35 ENNILVFNAEYGNS-----SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TTEEEEEETTTCCE-----EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CCcEEEEECCCCce-----EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 89999999988763 3333 4432 22458899999999998876 556799999877544332
Q ss_pred ecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcC----------------CcceEEEecCCC
Q 038702 72 HNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYIS----------------AIPCRFHAHPHQ 135 (154)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 135 (154)
+.. .....+|+|||+.|+.+ .++.|++|++.+++..+........ .....+.|+| +
T Consensus 110 ~~~------~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-D 181 (740)
T 4a5s_A 110 IPN------NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-N 181 (740)
T ss_dssp CCT------TEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-T
T ss_pred CCC------cceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-C
Confidence 221 23467899999999887 5789999999887754322211111 1112478999 8
Q ss_pred ccEEEEEcC
Q 038702 136 VGTLAGATG 144 (154)
Q Consensus 136 ~~~l~~~~~ 144 (154)
++.|+..+.
T Consensus 182 g~~la~~~~ 190 (740)
T 4a5s_A 182 GTFLAYAQF 190 (740)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEE
Confidence 898888764
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=4.1e-12 Score=80.05 Aligned_cols=139 Identities=7% Similarity=0.038 Sum_probs=95.7
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceee---cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVL---SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
++...++.|.+|+... + ..... .+...+..++++|+++.+++...++.|.+||.... ....+... +.
T Consensus 136 v~~~~~~~i~~~~~~g-~-----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~---g~ 205 (286)
T 1q7f_A 136 VVECKVMRVIIFDQNG-N-----VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQIGGE---GI 205 (286)
T ss_dssp EEETTTTEEEEECTTS-C-----EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEESCT---TT
T ss_pred EEECCCCEEEEEcCCC-C-----EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-EEEEEccC---Cc
Confidence 3445677888888542 2 22222 34457899999999998888888999999997543 22222211 11
Q ss_pred eEeEEEEEEcCCCcEEEEEccCC-eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTR-TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
......++++++++++++...++ .|++|+. +++.+..+..+.....+..++++| +++++++ +.|++|++|++
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEEC
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEc
Confidence 11234678899999888887776 9999995 566666666544333446889999 7777777 57999999986
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.53 E-value=1e-13 Score=95.34 Aligned_cols=131 Identities=11% Similarity=-0.043 Sum_probs=90.9
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCC--eEEEEeccccccceeEe-ecCCCCce--EeE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDD--TIGIWSGVNFENTAMIH-HNNQTGRW--ISS 82 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~~~~~~~~~~~~~~~-~~~~~~~~--~~~ 82 (154)
+.|++||+.+++ ...+..|.+.+..++|+|+|+.|+++..++ .|.+||+.+++.. ... +....... ...
T Consensus 175 ~~i~~~d~~~g~-----~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 175 VSLFTSNLSSGG-----LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEETTTCC-----CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred eEEEEEcCCCCC-----ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 679999988765 455668888899999999999999888888 8999999887655 222 11100000 001
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCC---eEEEeeC
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGG---QVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~~wd~ 153 (154)
....|+|+|.++++++.++.+++|++ ++.... .. . ....++++ ++.++++++.+. .+.+||+
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~---~~-~-~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID--GERVEA---PQ-G-NHGRVVLW--RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET--TEEECC---CS-S-EEEEEEEE--TTEEEEEEEETTEEEEEEEETT
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc---CC-C-ceEEEEec--CCEEEEEEcCCCCCCeEEEEcC
Confidence 12349999988999999999999999 554431 22 2 22467777 567777777664 3666664
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.52 E-value=4e-13 Score=87.62 Aligned_cols=143 Identities=8% Similarity=0.084 Sum_probs=89.2
Q ss_pred eeecCCCcEEEEEcc-CCCCCCCCCceeeccc--CCeEEEEEcCCCCE--EEEee-------------CCCeEEEEeccc
Q 038702 2 ATSSTDGTACIWDLR-SMATDKPEPTKVLSHK--RAVHSAYFSPSGSS--LATTS-------------FDDTIGIWSGVN 63 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~-~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~--l~~~~-------------~d~~v~~~~~~~ 63 (154)
++++.+ .|.+|++. +++ ......+. +....++|+|+|++ ++++. .++.+.+|++..
T Consensus 55 ~~~~~~-~v~~~~~~~~g~-----~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~ 128 (365)
T 1jof_A 55 YGAAMK-KWSSFAVKSPTE-----IVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE 128 (365)
T ss_dssp EEEEBT-EEEEEEEEETTE-----EEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT
T ss_pred EEEccc-eEEEEEECCCCC-----EEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC
Confidence 455555 89999986 443 22222221 34566899999994 44553 689999999974
Q ss_pred -cccceeEeec-CCCCceEeEEEEEEcCCCcEEEEEc-cCCeEEEecCC-Cccce--eEEeCCCcCCcceEEEecCCCcc
Q 038702 64 -FENTAMIHHN-NQTGRWISSFRAIWGWDDSCIFIGN-MTRTVEVISPA-QRRSV--ATLQSPYISAIPCRFHAHPHQVG 137 (154)
Q Consensus 64 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 137 (154)
++........ ..... ....++|+|+|++++++. .++.|++|++. +++.. ..+........+..++|+| +++
T Consensus 129 ~g~~~~~~~~~~~~~~~--~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~ 205 (365)
T 1jof_A 129 TGKLEKNVQNYEYQENT--GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGN 205 (365)
T ss_dssp TCCEEEEEEEEECCTTC--CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSS
T ss_pred CCcCcceEeeEEeCCCC--cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCC
Confidence 3332222210 01111 234678999999887765 36799999998 66543 2333211122246789999 777
Q ss_pred EEEEEc-CCCeEEEeeC
Q 038702 138 TLAGAT-GGGQVYVWTS 153 (154)
Q Consensus 138 ~l~~~~-~d~~i~~wd~ 153 (154)
++++++ .++.|.+|++
T Consensus 206 ~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 206 YLYALMEAGNRICEYVI 222 (365)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCeEEEEEE
Confidence 776655 5789999875
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=7.6e-14 Score=98.05 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=88.4
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCC------CceE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQT------GRWI 80 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~------~~~~ 80 (154)
++.|++||+.+++.... ..+ ...+..++|||+|+.|+.+. ++.|++|++.+++........... ..++
T Consensus 89 ~~~i~~~d~~~g~~~~~--~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v 162 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRG--NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWV 162 (719)
T ss_dssp EEEEEEEETTTTEECCS--SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHH
T ss_pred ceEEEEEECCCCccccc--eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccce
Confidence 68999999987653100 111 25688999999999999885 789999999877654332111100 0000
Q ss_pred -------eEEEEEEcCCCcEEEEEccCC----------------------------------eEEEecCCCccce--eEE
Q 038702 81 -------SSFRAIWGWDDSCIFIGNMTR----------------------------------TVEVISPAQRRSV--ATL 117 (154)
Q Consensus 81 -------~~~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~~~~~~~~~--~~~ 117 (154)
....+.|+|||++|++++.|. .|++||+.+++.. ..+
T Consensus 163 ~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~ 242 (719)
T 1z68_A 163 YEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV 242 (719)
T ss_dssp HHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC
T ss_pred eeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc
Confidence 002568999999999988652 7889999987753 122
Q ss_pred eC-----CCcCCcceEEEecCCCccEEEEEcC--C--CeEEEee
Q 038702 118 QS-----PYISAIPCRFHAHPHQVGTLAGATG--G--GQVYVWT 152 (154)
Q Consensus 118 ~~-----~~~~~~~~~~~~~~~~~~~l~~~~~--d--~~i~~wd 152 (154)
.. .+. .....++|+| ++.++++... + ..|.+||
T Consensus 243 ~~~~~~~~~~-~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 243 PVPAMIASSD-YYFSWLTWVT-DERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp CCCHHHHTSC-EEEEEEEESS-SSEEEEEEEESSTTEEEEEEEE
T ss_pred cCCccCCCCc-ceEEEeEEeC-CCeEEEEEeccccCeEEEEEEc
Confidence 11 111 2236789999 6777766432 2 3478888
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=6.9e-13 Score=92.42 Aligned_cols=115 Identities=8% Similarity=-0.078 Sum_probs=80.2
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCC----------CeEEEEeccc------cccceeE-eecCCCCceEeEEEEEEcCCCcE
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFD----------DTIGIWSGVN------FENTAMI-HHNNQTGRWISSFRAIWGWDDSC 93 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d----------~~v~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 93 (154)
|...+..++|+|+|+.|++++.+ ..|.+||+.+ .+...+. .. .. ....+.|+|||++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~----~~--~~~~~~~SpDG~~ 201 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA----HR--FVTGPRLSPDGRQ 201 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC----SS--EECCCEECTTSSE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecC----CC--cccCceECCCCCE
Confidence 66788999999999999998876 5899999987 4433222 11 11 2234679999999
Q ss_pred EEEEccC--------CeEEEecCC-Ccc--ceeEEeCCCcCCcceEEEecCCCccEEEEEcCCC--eEEEeeC
Q 038702 94 IFIGNMT--------RTVEVISPA-QRR--SVATLQSPYISAIPCRFHAHPHQVGTLAGATGGG--QVYVWTS 153 (154)
Q Consensus 94 l~~~~~d--------~~i~i~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~~wd~ 153 (154)
|+..+.+ ..|++||+. +++ ....+...+... ...+.|+| +++++++++.++ .|.+||+
T Consensus 202 la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~-~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 202 AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA-IAQAEWAP-DGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC-EEEEEECT-TSCEEEEECTTSSCEEEEECT
T ss_pred EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce-EcceEECC-CCeEEEEECCCCCeEEEEEEC
Confidence 9888755 379999998 561 233333222222 25789999 777888888888 6666664
No 166
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=4.9e-11 Score=82.00 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=101.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEecc--ccccceeEeecCCCCce
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGV--NFENTAMIHHNNQTGRW 79 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~~~~~ 79 (154)
++...++.|.++|..+++ ..........+..+.|+|+|+++++++.|+.|.+||+. +.+....+....
T Consensus 171 V~~~~~~~V~viD~~t~~-----v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~----- 240 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYE-----IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS----- 240 (567)
T ss_dssp EEETTTTEEEEEETTTCC-----EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-----
T ss_pred EEeCCCCeEEEEECCCCe-----EEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-----
Confidence 566788999999998876 44444455567899999999999999999999999995 554433332211
Q ss_pred EeEEEEEEc----CCCcEEEEEcc-CCeEEEecCCCccceeEEeCCCc---------CCcceEEEecCCCccEEEEEcCC
Q 038702 80 ISSFRAIWG----WDDSCIFIGNM-TRTVEVISPAQRRSVATLQSPYI---------SAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 80 ~~~~~~~~~----~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
....++++ |+|+++++++. ++.+.++|..+.+.+..+..... ......+..++..+.+++....+
T Consensus 241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred -CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 23367889 69998887764 48999999999998887763211 11224566666556667777778
Q ss_pred CeEEEeeC
Q 038702 146 GQVYVWTS 153 (154)
Q Consensus 146 ~~i~~wd~ 153 (154)
|.|.++|.
T Consensus 320 g~v~~vd~ 327 (567)
T 1qks_A 320 GKILLVDY 327 (567)
T ss_dssp TEEEEEET
T ss_pred CeEEEEec
Confidence 89888874
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=8.5e-11 Score=74.04 Aligned_cols=136 Identities=8% Similarity=0.027 Sum_probs=93.3
Q ss_pred CCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
++.|.+||. +++ ..... .+...+..++++|+++.+++...++.|.+||... +....+..... ......
T Consensus 99 ~~~i~~~d~-~g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~---~~~p~~ 168 (286)
T 1q7f_A 99 THQIQIYNQ-YGQ-----FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKH---LEFPNG 168 (286)
T ss_dssp GCEEEEECT-TSC-----EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTT---CSSEEE
T ss_pred CCEEEEECC-CCc-----EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCc---cCCcEE
Confidence 678888883 333 22222 3445789999999999888888889999999653 22222221111 112346
Q ss_pred EEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCC-eEEEeeCC
Q 038702 85 AIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGG-QVYVWTSD 154 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~~wd~~ 154 (154)
++++++++++++...++.|++||. .++.+..+........+..++++| +++++++...++ .|.+||.+
T Consensus 169 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 169 VVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTT
T ss_pred EEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCC
Confidence 789999998888888999999997 455555564332223346789998 778888888776 99999863
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.43 E-value=2.5e-12 Score=89.59 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=88.7
Q ss_pred CcEEEEEccC------CCCCCCCCceee-cccCCeEEEEEcCCCCEEEEeeCC--------CeEEEEecc-cc---ccce
Q 038702 8 GTACIWDLRS------MATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATTSFD--------DTIGIWSGV-NF---ENTA 68 (154)
Q Consensus 8 ~~v~vw~~~~------~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~~~~~~-~~---~~~~ 68 (154)
..|++||+.. +. ...+. .+...+..++|+|+|++|+.++.+ ..|.+||+. ++ +...
T Consensus 161 ~~i~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA-----VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGG-----SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCc-----eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5789999876 33 34444 556778889999999999887755 379999998 44 2222
Q ss_pred eEeecCCCCceEeEEEEEEcCCCcEEEEEccCC--eEEEecCCCccceeEEeCCCcCCc-------ceEEEecCCCccEE
Q 038702 69 MIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR--TVEVISPAQRRSVATLQSPYISAI-------PCRFHAHPHQVGTL 139 (154)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l 139 (154)
+..... . ....+.|+|+|++++++..++ .|.+||+.+++...... ++.... ...++++| ++.++
T Consensus 236 l~~~~~---~--~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~-~~~~~ 308 (662)
T 3azo_A 236 LLGGPE---E--AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLA-NGLIA 308 (662)
T ss_dssp EEEETT---B--CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECT-TSCEE
T ss_pred eCCCCC---c--eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCceEeEeC-CCEEE
Confidence 222211 1 234678999999888888888 67777776666443332 221110 13567778 77888
Q ss_pred EEEcCCCeEEEee
Q 038702 140 AGATGGGQVYVWT 152 (154)
Q Consensus 140 ~~~~~d~~i~~wd 152 (154)
++++. +.+++|.
T Consensus 309 ~~~~~-~~~~l~~ 320 (662)
T 3azo_A 309 VVHGK-GAAVLGI 320 (662)
T ss_dssp EEEBS-SSCEEEE
T ss_pred EEEEc-CccEEEE
Confidence 88888 9888883
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.43 E-value=1.3e-10 Score=74.88 Aligned_cols=141 Identities=10% Similarity=0.037 Sum_probs=97.5
Q ss_pred CcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccc-cceeEeecCC----CCceE
Q 038702 8 GTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFE-NTAMIHHNNQ----TGRWI 80 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~-~~~~~~~~~~----~~~~~ 80 (154)
+.|.+||..+++ ..... ++-.....++++|+|+++++...++.|++|+..... ....+..... .+...
T Consensus 69 ~~i~~~d~~~g~-----~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAE-----ILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCC-----EEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCe-----EEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 578899887655 33333 344578999999999988888889999999986543 2332321110 11122
Q ss_pred eEEEEEEcC-CCcEEEEEc-cCCeEEEecCCCccceeEEeCCC--------cCCcceEEEecCCCccEEEEEcCCCeEEE
Q 038702 81 SSFRAIWGW-DDSCIFIGN-MTRTVEVISPAQRRSVATLQSPY--------ISAIPCRFHAHPHQVGTLAGATGGGQVYV 150 (154)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 150 (154)
....++++| ++.++++.+ .++.|++|+ .+++.+..+.... ....+..++++|..+.++++...++.|++
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 345678999 788888876 689999999 5666666654211 11224688999944788888889999999
Q ss_pred eeCC
Q 038702 151 WTSD 154 (154)
Q Consensus 151 wd~~ 154 (154)
||++
T Consensus 223 ~~~~ 226 (329)
T 3fvz_A 223 FKTD 226 (329)
T ss_dssp EETT
T ss_pred EECC
Confidence 9974
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=3.8e-11 Score=75.62 Aligned_cols=141 Identities=11% Similarity=-0.043 Sum_probs=98.7
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeeccc-CCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHK-RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
|++++.|+.|.+||..+++. .-++..+. ..+.++.++|+|+.++ +.++.|..||. +++....+... ...
T Consensus 8 lv~~~~~~~v~~~d~~tG~~----~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--~~~- 77 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEI----VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--AGC- 77 (276)
T ss_dssp EEECTTCSEEEEEETTTTEE----EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC--TTC-
T ss_pred EEeeCCCCEEEEEECCCCeE----EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC--CCc-
Confidence 47889999999999878774 33443443 4788999999999888 45778999998 56554444321 111
Q ss_pred EeEEEEEEcCCCcEEEEEcc-CCeEEEecCCCccceeEEeCCCc--C--CcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIFIGNM-TRTVEVISPAQRRSVATLQSPYI--S--AIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....+.+.++|+++++.+. ++.+..+|. +++.+..+..... . .....++..+ +++++++...++.|..||.+
T Consensus 78 -~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 78 -EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp -EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT
T ss_pred -cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC
Confidence 2335678999999998876 777888886 6777666652111 0 1112345667 78899999999999999864
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.41 E-value=1.1e-11 Score=81.24 Aligned_cols=132 Identities=9% Similarity=0.007 Sum_probs=89.2
Q ss_pred CeeecCCCcEEEEEccCCC------CCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecC
Q 038702 1 MATSSTDGTACIWDLRSMA------TDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~ 74 (154)
+++|+.+ .+.+|++.... ...........+.. |+.++| +++.|+++ .++.|++||+++...........
T Consensus 52 l~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~ 126 (388)
T 1xip_A 52 FVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFE 126 (388)
T ss_dssp EEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECS
T ss_pred EEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceee
Confidence 3566666 46669876432 01111223446777 999999 89999998 88999999998876443332211
Q ss_pred CCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 75 QTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+. .+.+.+. .++++..||.|.+||+.+++... + .. . ..+++|+| ++ ++.|..||++++|+.
T Consensus 127 ---~~v~--~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~---~~-~-Vs~v~WSp-kG--~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 127 ---KPVF--QLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L---AQ-N-VTSFDVTN-SQ--LAVLLKDRSFQSFAW 189 (388)
T ss_dssp ---SCEE--EEEECSS--EEEEEETTSEEEEEETTTCCEEE-E---EE-S-EEEEEECS-SE--EEEEETTSCEEEEEE
T ss_pred ---ccee--eEEecCC--CEEEEECCCCEEEEEccCCcccc-c---cC-C-ceEEEEcC-Cc--eEEEEcCCcEEEEcC
Confidence 1122 3344433 38888999999999999877643 2 12 2 36899999 66 678999999999975
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.39 E-value=3.5e-12 Score=90.12 Aligned_cols=115 Identities=10% Similarity=-0.007 Sum_probs=82.3
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC---------CeE
Q 038702 33 RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT---------RTV 103 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------~~i 103 (154)
....++.|+|++++++++ |+.|++||+.+++....+.........+..-...|+|||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345689999999888886 999999999988766554322211111111135789999999998876 566
Q ss_pred EEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 104 EVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+||+.+++... +..+.. .....+|+| +++.|+.+ .|+.|++||++
T Consensus 95 ~~~d~~~~~~~~-l~~~~~--~~~~~~~SP-dG~~la~~-~~~~i~~~~~~ 140 (740)
T 4a5s_A 95 DIYDLNKRQLIT-EERIPN--NTQWVTWSP-VGHKLAYV-WNNDIYVKIEP 140 (740)
T ss_dssp EEEETTTTEECC-SSCCCT--TEEEEEECS-STTCEEEE-ETTEEEEESST
T ss_pred EEEECCCCcEEE-cccCCC--cceeeEECC-CCCEEEEE-ECCeEEEEECC
Confidence 799999987543 433322 236789999 88888887 56899999863
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.38 E-value=1e-11 Score=81.04 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=90.6
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee----------CCCeEEEEeccccccceeEeecCC
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS----------FDDTIGIWSGVNFENTAMIHHNNQ 75 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~ 75 (154)
.|+.|.+||..+++. ...+..+..+ .++|+|+++++++++ .++.|.+||..+.+....+.....
T Consensus 29 ~d~~v~v~D~~t~~~----~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTNGKF----LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETTTCCE----EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECCCCeE----EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 478999999877653 2333344444 899999999999886 367899999987766554432110
Q ss_pred ---CCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCCCccceeE-EeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 76 ---TGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPAQRRSVAT-LQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 76 ---~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
.+. ....++++|+|++|+++.. ++.|.+||+.+++.+.. +.... . ..+.+.|.....+++.+.||.+.
T Consensus 103 ~~~~g~--~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~--~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 103 RVQGLN--YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--C--WSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp BCCBCC--CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--E--EEEEECTTSSSEEEEEETTSSEE
T ss_pred ccccCC--CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--c--ceeEEcCCCCeeEEEECCCCcEE
Confidence 011 1124578999999998874 57899999999988776 54221 1 12345553445666777777777
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
+|++
T Consensus 177 ~v~~ 180 (361)
T 2oiz_A 177 TINL 180 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.36 E-value=4.5e-11 Score=76.98 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=92.5
Q ss_pred CCCcEEEEEccCCCCCCCCCceeec-----------ccCCeEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEeec
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLS-----------HKRAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHHN 73 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~ 73 (154)
.++.|++|+.. +. .....+ +-.....++++|+ ++++++...++.|++|+..+++....+...
T Consensus 164 ~~~~I~~~~~~-g~-----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 164 CNSRIVQFSPS-GK-----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp SCCEEEEECTT-SC-----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred CCCeEEEEcCC-CC-----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 47888888843 32 232222 2234889999998 777788888999999999866655444322
Q ss_pred CCCCceEeEEEEEEcCCCcEEEE-------EccCCeEEEecCCCccceeEEeCC-CcCCcceEEEecCCCccEEEEEcCC
Q 038702 74 NQTGRWISSFRAIWGWDDSCIFI-------GNMTRTVEVISPAQRRSVATLQSP-YISAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~-------~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
. .+. ....++++| +..+.+ ...+..|++|+..+++.+..+... .....+..++++| ++.++++...+
T Consensus 238 ~-~~~--~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~ 312 (329)
T 3fvz_A 238 S-FGR--NVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHT 312 (329)
T ss_dssp T-TTT--CEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEEEESSS
T ss_pred c-cCC--CcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEEEECCC
Confidence 1 121 233567788 433333 334458999999999988877421 1223346889999 77889999999
Q ss_pred CeEEEeeC
Q 038702 146 GQVYVWTS 153 (154)
Q Consensus 146 ~~i~~wd~ 153 (154)
+.|++|++
T Consensus 313 ~~I~~~~~ 320 (329)
T 3fvz_A 313 NTVWKFTL 320 (329)
T ss_dssp CCEEEEEE
T ss_pred CEEEEEeC
Confidence 99999986
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.34 E-value=1.1e-10 Score=76.19 Aligned_cols=64 Identities=13% Similarity=0.140 Sum_probs=50.7
Q ss_pred EEEcCCCcEEEEEcc-----------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 85 AIWGWDDSCIFIGNM-----------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
++++|++..++.... .+.|.+||+.+++.+.++..+. +..++++| ++++|++++. +.|.+||.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~sp-dg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQ-QRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEET-TTTEEEEECS-SCEEEEEC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECC-CCCEEEEeCC-CeEEEEEC
Confidence 467788777666543 3489999999999999988655 46889999 7788888776 99999996
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
+
T Consensus 333 ~ 333 (361)
T 2oiz_A 333 S 333 (361)
T ss_dssp S
T ss_pred C
Confidence 3
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.32 E-value=5.5e-10 Score=71.75 Aligned_cols=136 Identities=7% Similarity=-0.085 Sum_probs=89.9
Q ss_pred cCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
+.++.++.|.- .. ...+..+...+.+++|+|++++++++..++.|.+||..+.+........ .. ....
T Consensus 24 ~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~--~~~~ 91 (333)
T 2dg1_A 24 ISESELQTITA---EP----WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH---KA--NPAA 91 (333)
T ss_dssp CCGGGSCEEEC---EE----EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECS---SS--SEEE
T ss_pred eecccCccccc---ce----eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC---CC--Ccce
Confidence 45666677721 11 2333456667899999999998888888999999999876654433211 11 2346
Q ss_pred EEEcCCCcEEEEEccC----CeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC------CCeEEEeeC
Q 038702 85 AIWGWDDSCIFIGNMT----RTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG------GGQVYVWTS 153 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~~wd~ 153 (154)
++++++++++++...+ +.|.+||..+++....+...........++++| ++.++++... .+.|..+|.
T Consensus 92 i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 92 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp EEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECT
T ss_pred EEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeC
Confidence 6889999988877666 689999998776543333222223346788999 7777776654 356666654
No 177
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.31 E-value=1.4e-10 Score=76.03 Aligned_cols=121 Identities=11% Similarity=-0.030 Sum_probs=85.7
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
+++ .++.|++||+++... ......|...+.++.+.+. .+++++.||.+.+||+.+..... ... .
T Consensus 101 ~v~-~~~~l~v~dv~sl~~----~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~------~ 164 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSE----FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQ------N 164 (388)
T ss_dssp EEE-ESSEEEEEESSSTTC----EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEE------S
T ss_pred EEE-cCCcEEEEEchhhhc----cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccC------C
Confidence 455 789999999987653 3344467778888887654 38889999999999998766432 111 2
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccc--eeEEeCC-------CcCCcceEEEecCCCccEEEE
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRS--VATLQSP-------YISAIPCRFHAHPHQVGTLAG 141 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~ 141 (154)
+.+++|+|+| ++.|..||++++|+....+. ..++..+ .......++.|.+ +..++++
T Consensus 165 Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 165 VTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp EEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred ceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 3467999999 67788999999998877664 5555211 0124447889998 5566654
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.31 E-value=1.6e-10 Score=74.58 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=80.6
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC---C--eEEEEeccccccceeEeecCCCCceEe
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD---D--TIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
++.|.+||+..++ ...+ ..+..++|+|+|++|+..+.+ + .|.+|++.+++.........
T Consensus 42 ~~~l~~~d~~~~~-----~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~------- 105 (347)
T 2gop_A 42 ENTIVIENLKNNA-----RRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN------- 105 (347)
T ss_dssp EEEEEEEETTTCC-----EEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-------
T ss_pred cceEEEEeCCCCc-----eEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-------
Confidence 5678888887654 2222 567889999999999887654 3 37777887765444333211
Q ss_pred EEEEEEcCCCcEEEEEccC---------------------------CeEEEecCCCccceeEEeCCCcCCcceEEEecCC
Q 038702 82 SFRAIWGWDDSCIFIGNMT---------------------------RTVEVISPAQRRSVATLQSPYISAIPCRFHAHPH 134 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d---------------------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (154)
...+.|+|+++.|+.++.+ ..|++||+.+++.+..+.. . ....+.|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~sp- 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHR- 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEET-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCC-
Confidence 3356899999988887642 5789999988876455543 2 235789999
Q ss_pred CccEEEEEcCC
Q 038702 135 QVGTLAGATGG 145 (154)
Q Consensus 135 ~~~~l~~~~~d 145 (154)
++ +++++..+
T Consensus 181 dg-~~~~~~~~ 190 (347)
T 2gop_A 181 DK-IVVNVPHR 190 (347)
T ss_dssp TE-EEEEEECC
T ss_pred Ce-EEEEEecc
Confidence 77 77777554
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.31 E-value=1.8e-10 Score=74.22 Aligned_cols=138 Identities=9% Similarity=-0.006 Sum_probs=94.5
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC----------CeEEEEeccccccceeEeecCC
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD----------DTIGIWSGVNFENTAMIHHNNQ 75 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~v~~~~~~~~~~~~~~~~~~~ 75 (154)
.++.|.++|+.+++ .............+.++|+|++++++..+ +.|.++|..+.+....+....
T Consensus 150 ~~~~v~viD~~t~~-----~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~- 223 (328)
T 3dsm_A 150 YQNRILKIDTETDK-----VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL- 223 (328)
T ss_dssp TCCEEEEEETTTTE-----EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-
T ss_pred CCCEEEEEECCCCe-----EEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-
Confidence 47899999998765 33333333445788999999877776654 789999998876554433211
Q ss_pred CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEE----cCCCeEEEe
Q 038702 76 TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGA----TGGGQVYVW 151 (154)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~d~~i~~w 151 (154)
+. ....++++|++++++++.. .|.+||..+++.............+..++++|.++.++++. ..++.|.+|
T Consensus 224 -g~--~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~ 298 (328)
T 3dsm_A 224 -GD--WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRY 298 (328)
T ss_dssp -TC--CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred -CC--CceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEE
Confidence 11 2235789999998887764 89999998877532111111123456789998677777887 678999999
Q ss_pred eCC
Q 038702 152 TSD 154 (154)
Q Consensus 152 d~~ 154 (154)
|.+
T Consensus 299 d~~ 301 (328)
T 3dsm_A 299 SPQ 301 (328)
T ss_dssp CTT
T ss_pred CCC
Confidence 874
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.30 E-value=2.5e-10 Score=74.71 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=90.5
Q ss_pred eecC-CCc--EEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 3 TSST-DGT--ACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 3 ~~~~-d~~--v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
.++. ++. |.+||+.+++ ...+. ++...+..+.|+|+++.|+.++.++.+.+||+.+++......... .
T Consensus 52 ~~~~~~g~~~l~~~d~~~g~-----~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~---~ 123 (388)
T 3pe7_A 52 FGGAFDGPWNYYLLDLNTQV-----ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPA---E 123 (388)
T ss_dssp EEECTTSSCEEEEEETTTCE-----EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT---T
T ss_pred EEEcCCCCceEEEEeCCCCc-----eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechh---h
Confidence 3444 563 7777877655 33333 455555577899999999999999999999999887655443221 1
Q ss_pred eEeEEEEEEcCCCcEEEEE----------------------ccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCc
Q 038702 79 WISSFRAIWGWDDSCIFIG----------------------NMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQV 136 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~----------------------~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
........++|++.+++.. ..+..|.+||+.+++...... +.. ....+.|+|.++
T Consensus 124 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~--~~~~~~~sp~dg 200 (388)
T 3pe7_A 124 WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQ--WLGHPIYRPYDD 200 (388)
T ss_dssp EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESS--CEEEEEEETTEE
T ss_pred cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CCc--cccccEECCCCC
Confidence 2222233458999888742 234679999999887544433 222 225788998445
Q ss_pred cEEEEEcCC------CeEEEeeC
Q 038702 137 GTLAGATGG------GQVYVWTS 153 (154)
Q Consensus 137 ~~l~~~~~d------~~i~~wd~ 153 (154)
..|+....+ ..|.++|+
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEET
T ss_pred CEEEEEEecCCCCCcceEEEEeC
Confidence 666655543 36777775
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.29 E-value=1.6e-09 Score=69.53 Aligned_cols=140 Identities=11% Similarity=0.011 Sum_probs=92.3
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEEeeCC----CeEEEEeccccccceeEeecCCC
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATTSFD----DTIGIWSGVNFENTAMIHHNNQT 76 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----~~v~~~~~~~~~~~~~~~~~~~~ 76 (154)
+++..++.|.+||..+++ ...+. .+...+.+++++|+++++++...+ +.|.+||..+.......... ..
T Consensus 60 ~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~ 133 (333)
T 2dg1_A 60 LLDVFEGNIFKINPETKE-----IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-ST 133 (333)
T ss_dssp EEETTTCEEEEECTTTCC-----EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SS
T ss_pred EEECCCCEEEEEeCCCCc-----EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-cc
Confidence 356678889999887654 33333 566789999999999988877666 68999998876554332211 11
Q ss_pred CceEeEEEEEEcCCCcEEEEEcc------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEE
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNM------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVY 149 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~ 149 (154)
.. ....++++|+++++++... .+.|..++..+++...... .. .....++++| +++ ++++.+.++.|.
T Consensus 134 ~~--~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~i~~~~-dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 134 AY--CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NI--SVANGIALST-DEKVLWVTETTANRLH 207 (333)
T ss_dssp CC--CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EE--SSEEEEEECT-TSSEEEEEEGGGTEEE
T ss_pred CC--cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CC--CcccceEECC-CCCEEEEEeCCCCeEE
Confidence 11 2345688999988877653 3567777766554332222 11 1235788999 666 456666788999
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
+||+
T Consensus 208 ~~d~ 211 (333)
T 2dg1_A 208 RIAL 211 (333)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=3.3e-10 Score=74.15 Aligned_cols=136 Identities=11% Similarity=0.102 Sum_probs=88.0
Q ss_pred cCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC-CCCEEEEeeCC------CeEEEEeccccccceeEeecCCCC
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP-SGSSLATTSFD------DTIGIWSGVNFENTAMIHHNNQTG 77 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~~~~ 77 (154)
..+..|.+||+.+++ ...+..+...+..+.|+| +++.++..+.+ ..|.+|++............ ..
T Consensus 165 ~~~~~l~~~d~~~g~-----~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~--~~ 237 (396)
T 3c5m_A 165 NPTCRLIKVDIETGE-----LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA--EG 237 (396)
T ss_dssp CCCEEEEEEETTTCC-----EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC--TT
T ss_pred CCcceEEEEECCCCc-----EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC--CC
Confidence 345678999987754 344456777899999999 78877766543 35888887655433222210 01
Q ss_pred ceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc---------
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT--------- 143 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------- 143 (154)
.....+.|+|++++|+..+.+ +.|++||+.+++........ .. . ..|+|.++.+++.++
T Consensus 238 --~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~-~-~~~s~~dg~~l~~~~~~~p~~~~~ 310 (396)
T 3c5m_A 238 --ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PC-S-HLMSNFDGSLMVGDGCDAPVDVAD 310 (396)
T ss_dssp --EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SE-E-EEEECSSSSEEEEEECCC------
T ss_pred --ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CC-C-CCccCCCCceEEEecCCcceeecc
Confidence 123457899999988777654 45999999887654332211 11 2 678874556776654
Q ss_pred -------CCCeEEEeeCC
Q 038702 144 -------GGGQVYVWTSD 154 (154)
Q Consensus 144 -------~d~~i~~wd~~ 154 (154)
.+..|++||++
T Consensus 311 ~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 311 ADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp ----CCCCCCEEEEEETT
T ss_pred ccccccCCCCcEEEEecc
Confidence 34789999863
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.28 E-value=1.7e-10 Score=81.30 Aligned_cols=116 Identities=10% Similarity=-0.017 Sum_probs=80.3
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCCC-----eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCe---
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFDD-----TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRT--- 102 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--- 102 (154)
|...+..++|||+|++|+.+..++ .|++||+.+++.......... ...++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~------~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK------FSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC------SCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcc------cceEEEEeCCCEEEEEEECCcccc
Confidence 334688999999999998765533 899999998776543221111 124689999999998887765
Q ss_pred -------------EEEecCCCccce--eEEeCCCcCCcceEEEecCCCccEEEEEcC-----CCeEEEeeC
Q 038702 103 -------------VEVISPAQRRSV--ATLQSPYISAIPCRFHAHPHQVGTLAGATG-----GGQVYVWTS 153 (154)
Q Consensus 103 -------------i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~~wd~ 153 (154)
|++|++.+++.. ..+...........+.|+| ++++|+..+. +..|++||+
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~ 266 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDL 266 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEG
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEEC
Confidence 999999887643 2223222222235788999 7787776654 568999986
No 184
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.28 E-value=5.2e-11 Score=77.88 Aligned_cols=110 Identities=17% Similarity=0.137 Sum_probs=72.6
Q ss_pred ceeecccCCeEE-----EEEcCCCCEEEEeeC-CC--eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEE
Q 038702 26 TKVLSHKRAVHS-----AYFSPSGSSLATTSF-DD--TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIG 97 (154)
Q Consensus 26 ~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (154)
..+..|...... .+|+|+|++|+.++. ++ .|.+||+.+++.......... . .+...|+|+++.|+.+
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---~--~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---N--TFGGFLSPDDDALFYV 98 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---C--SSSCEECTTSSEEEEE
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---C--ccceEEcCCCCEEEEE
Confidence 333355555555 789999999988887 67 478888877665443322111 1 1124699999999999
Q ss_pred ccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEE
Q 038702 98 NMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAG 141 (154)
Q Consensus 98 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 141 (154)
+.++.|++||+.+++.......+........+..+| ++.+++.
T Consensus 99 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~ 141 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVG 141 (388)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEE
T ss_pred eCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeecc
Confidence 999999999999988766555443222212334577 6677663
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.27 E-value=5.9e-10 Score=71.81 Aligned_cols=141 Identities=11% Similarity=0.072 Sum_probs=92.5
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCC--ce
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTG--RW 79 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~--~~ 79 (154)
++...++.|.+||..+++ .............++++++++.+++...++.|.++|..+.+....+......+ ..
T Consensus 58 v~~~~~~~v~viD~~t~~-----~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~ 132 (328)
T 3dsm_A 58 IVVNNSHVIFAIDINTFK-----EVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGS 132 (328)
T ss_dssp EEEGGGTEEEEEETTTCC-----EEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCB
T ss_pred EEEcCCCEEEEEECcccE-----EEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCC
Confidence 345567899999998766 33333445678899999988544444489999999999877654443221000 01
Q ss_pred EeEEEEEEcCCCcEEEEEc-cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC----------CeE
Q 038702 80 ISSFRAIWGWDDSCIFIGN-MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG----------GQV 148 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------~~i 148 (154)
.. .+++ .++..+++.. .++.|.++|+.+++.+..+.... .+..+.++| ++++++++..+ +.|
T Consensus 133 p~--~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 133 TE--QMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---QPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp CC--CEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---CBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred cc--eEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---CccceEEcC-CCCEEEEECCCccCCccccCCceE
Confidence 11 2234 3444444443 48899999999998887776422 224677888 77777776654 789
Q ss_pred EEeeCC
Q 038702 149 YVWTSD 154 (154)
Q Consensus 149 ~~wd~~ 154 (154)
.++|.+
T Consensus 206 ~~id~~ 211 (328)
T 3dsm_A 206 YRIDAE 211 (328)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999863
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.27 E-value=4.9e-10 Score=78.98 Aligned_cols=135 Identities=5% Similarity=-0.093 Sum_probs=86.5
Q ss_pred cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCe----------------EEEEeccccccc-eeEe
Q 038702 9 TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDT----------------IGIWSGVNFENT-AMIH 71 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------v~~~~~~~~~~~-~~~~ 71 (154)
.|++||+.+++. .........+..++|+|+|+.|+.++.++. |.+|++.+.... ....
T Consensus 152 ~i~v~d~~tg~~-----~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 152 TIKFMKVDGAKE-----LPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEETTTTEE-----EEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEECCCCCC-----CcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe
Confidence 899999987663 322222223678999999999999887765 999999876543 2222
Q ss_pred ecCCCCceEeEEEEEEcCCCcEEEEEcc-----CCeEEEecCCC------cc-ceeEEeCCCcCCcceEEEecCCCccEE
Q 038702 72 HNNQTGRWISSFRAIWGWDDSCIFIGNM-----TRTVEVISPAQ------RR-SVATLQSPYISAIPCRFHAHPHQVGTL 139 (154)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~i~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 139 (154)
....+.. ....+.|+|+|++|+..+. +..|++||+.+ ++ ....+..+..... ..++| ++..|
T Consensus 227 ~~~~~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~---~~~s~-dg~~l 300 (710)
T 2xdw_A 227 EFPDEPK--WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY---DYVTN-EGTVF 300 (710)
T ss_dssp CCTTCTT--CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE---EEEEE-ETTEE
T ss_pred ccCCCCe--EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE---EEEec-cCCEE
Confidence 2111121 2346689999999888765 56899999986 43 3555654443332 24666 45554
Q ss_pred EEEc-C---CCeEEEeeCC
Q 038702 140 AGAT-G---GGQVYVWTSD 154 (154)
Q Consensus 140 ~~~~-~---d~~i~~wd~~ 154 (154)
+..+ . .+.|.+||++
T Consensus 301 ~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 301 TFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp EEEECTTCTTCEEEEEETT
T ss_pred EEEECCCCCCCEEEEEeCC
Confidence 4443 3 3368888863
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.26 E-value=1.1e-09 Score=69.34 Aligned_cols=140 Identities=12% Similarity=0.044 Sum_probs=92.3
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
+++..++.|..|+...+ . ..+..+...+.+++++|+|+++++...++.|.+||..+++.......... .....
T Consensus 44 ~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~ 116 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDGQ-L-----SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEG-KKLNS 116 (296)
T ss_dssp EEEGGGTEEEEEETTSC-E-----EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT-EECCC
T ss_pred EEeCCCCEEEEEECCCC-e-----EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC-CCCCC
Confidence 45677888999998654 1 23335667899999999999888877788999999977654433221110 00001
Q ss_pred EEEEEEcCCCcEEEE----Ecc-------------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC
Q 038702 82 SFRAIWGWDDSCIFI----GNM-------------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~----~~~-------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
...++++|+|+++++ +.. .+.|..++.. ++ +..+..+. ..+..++++| +++.+++.+.
T Consensus 117 ~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~--~~~~gi~~s~-dg~~lv~~~~ 191 (296)
T 3e5z_A 117 PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDR--VKPNGLAFLP-SGNLLVSDTG 191 (296)
T ss_dssp CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCC--SSEEEEEECT-TSCEEEEETT
T ss_pred CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCC--CCCccEEECC-CCCEEEEeCC
Confidence 124678999998887 331 3456666655 43 33333222 2336789999 7777788888
Q ss_pred CCeEEEeeC
Q 038702 145 GGQVYVWTS 153 (154)
Q Consensus 145 d~~i~~wd~ 153 (154)
++.|.+||+
T Consensus 192 ~~~i~~~~~ 200 (296)
T 3e5z_A 192 DNATHRYCL 200 (296)
T ss_dssp TTEEEEEEE
T ss_pred CCeEEEEEE
Confidence 899999986
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.25 E-value=1.2e-10 Score=81.85 Aligned_cols=117 Identities=9% Similarity=-0.058 Sum_probs=78.6
Q ss_pred ccCCeEEEEEcCCCCEEE-----EeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCe---
Q 038702 31 HKRAVHSAYFSPSGSSLA-----TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRT--- 102 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~-----~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--- 102 (154)
|...+..++|||+|++|+ .|+.+..|++||+.+++..... +.... ....++|+|||+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~----~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGG----KYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCC----TTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcc----cccceEEecCCCEEEEEEecCCCCC
Confidence 444789999999999998 4455678999999987754111 11110 0024679999999999887765
Q ss_pred ----------EEEecCCCccce--eEEeCCCcCCcceEEEecCCCccEEEEEcCCC----eEEEeeC
Q 038702 103 ----------VEVISPAQRRSV--ATLQSPYISAIPCRFHAHPHQVGTLAGATGGG----QVYVWTS 153 (154)
Q Consensus 103 ----------i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~~wd~ 153 (154)
|++|++.+++.. ..+...........+.|+| ++++|+..+.++ .|++||.
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECT
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcC
Confidence 999999887632 2233222222335788999 778777766555 6666653
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=1.4e-09 Score=67.79 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=90.5
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
...++.|.+|+..+... ..........+..++++++++.+++...++.|.+|+............ .. ....
T Consensus 125 ~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~~---~~p~ 195 (270)
T 1rwi_B 125 DRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT--DI---TAPW 195 (270)
T ss_dssp EGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS--SC---CSEE
T ss_pred ECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc--CC---CCce
Confidence 34456777775433221 111112334678899999999777777788999999876543221111 10 1234
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+++++++.++++...++.|.+|+........ ... .....+..++++| +++++++...++.|++++++
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF-TGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC-CSCSCEEEEEECT-TCCEEEEEGGGTEEEEECCC
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc-CCCCCceeEEECC-CCCEEEEECCCCEEEEEcCC
Confidence 56889999888877778899999987654322 221 1112346788998 67888999999999999874
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.20 E-value=2.2e-09 Score=75.55 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=87.7
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCe-------------EEEEeccccccc-e
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDT-------------IGIWSGVNFENT-A 68 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------v~~~~~~~~~~~-~ 68 (154)
.|+.+.+|++||+.+++... ....... ....++|+|+|+.|+.++.|.. |++|++.+.... .
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~---~~~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~ 217 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSK---VDVIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT 217 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCS---SCCBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE
T ss_pred CCCceEEEEEEECCCCCCcC---CcccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce
Confidence 35566789999998876310 1111111 1267899999999999988776 999999887643 2
Q ss_pred eEeecCCCCceEeEEEEEEcCCCcEEEEEccCC----eEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc-
Q 038702 69 MIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR----TVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT- 143 (154)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 143 (154)
.......... ....+.|+|+|++|+..+.++ .|++++..+++. ..+..+.... ....+ + ++.+++...
T Consensus 218 lv~~~~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~--~~~~~-~-~g~l~~~s~~ 290 (695)
T 2bkl_A 218 VVHERTGDPT--TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK--YEVHA-W-KDRFYVLTDE 290 (695)
T ss_dssp EEECCCCCTT--CEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC--EEEEE-E-TTEEEEEECT
T ss_pred EEEecCCCCE--EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce--EEEEe-c-CCcEEEEECC
Confidence 2222111111 234668999999998887666 678887665543 3444333333 23445 4 344555554
Q ss_pred --CCCeEEEeeCC
Q 038702 144 --GGGQVYVWTSD 154 (154)
Q Consensus 144 --~d~~i~~wd~~ 154 (154)
.++.|.+||++
T Consensus 291 ~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 291 GAPRQRVFEVDPA 303 (695)
T ss_dssp TCTTCEEEEEBTT
T ss_pred CCCCCEEEEEeCC
Confidence 35889999873
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.16 E-value=4.8e-09 Score=66.07 Aligned_cols=139 Identities=10% Similarity=-0.066 Sum_probs=92.3
Q ss_pred cCCCcEEEEEccCCCCCCCCCceeecc-cCCeEEEEEcCCCCEEEEeeC-CCeEEEEeccccccceeEeecCC-CCceEe
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVLSH-KRAVHSAYFSPSGSSLATTSF-DDTIGIWSGVNFENTAMIHHNNQ-TGRWIS 81 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (154)
+.++.|..||. +++. .-++..+ ...+.++.+.++|+.+++.+. ++.+..+|. +++....+..... ......
T Consensus 53 s~~~~V~~~d~-~G~~----~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 53 SYSKGAKMITR-DGRE----LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp ECBSEEEEECT-TSCE----EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGS
T ss_pred eCCCCEEEECC-CCCE----EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccc
Confidence 34566777887 4442 2233322 346889999999999999887 778888876 3433322221111 000000
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
...+...+++.++++...++.|..||.. ++.+.++..+. .. ......+ ++++++++..+++|..+|.+
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~--~~~~~~~-~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG-TP--FSSAFLD-NGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-CC--CEEEECT-TSCEEEECBTTSEEEEECTT
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-Cc--cceeEcC-CCCEEEEeCCCCeEEEEeCc
Confidence 1123467899999999999999999998 99888887542 22 3456667 77889888888899988864
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.16 E-value=4.4e-09 Score=65.54 Aligned_cols=137 Identities=7% Similarity=-0.047 Sum_probs=86.3
Q ss_pred cCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
..++.|.+|+...... ......+...+.+++++++++.+++.. ++.|..||............. ......
T Consensus 43 ~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~-----~~~p~~ 112 (270)
T 1rwi_B 43 GMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDG-----LNYPEG 112 (270)
T ss_dssp SSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCS-----CSSEEE
T ss_pred CCCCcEEEecCCCccc----ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCC-----cCCCcc
Confidence 5667888887654331 111113335678899999998666665 889999998765432211111 012346
Q ss_pred EEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 85 AIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
++++++++++++...++.|.+|+..+........ .....+..++++| +++++++...++.|.+||.+
T Consensus 113 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF--TGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC--CSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTT
T ss_pred eEECCCCCEEEEECCCCEEEEEECCCceeEeecc--ccCCCceeEEEeC-CCCEEEEECCCCEEEEEecC
Confidence 6789999988887788899999866544322211 1112235688888 67788887788899999863
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.14 E-value=3.3e-09 Score=67.17 Aligned_cols=134 Identities=10% Similarity=-0.096 Sum_probs=82.4
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeec-----ccCCeEEEEEcCCCCEEEE----eeC-------------CCeEEEEec
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLS-----HKRAVHSAYFSPSGSSLAT----TSF-------------DDTIGIWSG 61 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~----~~~-------------d~~v~~~~~ 61 (154)
...++.|.+||..+++ ...+.. ....+..++++|+|+++++ ++. .+.|..++.
T Consensus 86 ~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 160 (296)
T 3e5z_A 86 SHGLRRLERQREPGGE-----WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP 160 (296)
T ss_dssp ETTTTEEEEECSTTCC-----EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT
T ss_pred ecCCCeEEEEcCCCCc-----EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECC
Confidence 3445778899886654 222221 1235678999999998887 331 235555555
Q ss_pred cccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC-Cccc---eeEEeCCCcCCcceEEEecCCCcc
Q 038702 62 VNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA-QRRS---VATLQSPYISAIPCRFHAHPHQVG 137 (154)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 137 (154)
. ++......... ....++|+|+++.+++.+.++.|++|++. +++. ...+ .. ....+..+++++ +++
T Consensus 161 ~-g~~~~~~~~~~------~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-~~~~p~~i~~d~-~G~ 230 (296)
T 3e5z_A 161 D-GTLSAPIRDRV------KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV-EPGKTDGLRVDA-GGL 230 (296)
T ss_dssp T-SCEEEEECCCS------SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-SSSCCCSEEEBT-TSC
T ss_pred C-CCEEEeecCCC------CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-CCCCCCeEEECC-CCC
Confidence 4 22222211111 12356899999988777888999999987 4443 2333 21 222235688888 777
Q ss_pred EEEEEcCCCeEEEeeCC
Q 038702 138 TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 138 ~l~~~~~d~~i~~wd~~ 154 (154)
++++. ++.|.+||.+
T Consensus 231 l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEEE--TTEEEEECTT
T ss_pred EEEEc--CCeEEEECCC
Confidence 76666 7899999864
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.08 E-value=5.2e-08 Score=61.91 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=81.3
Q ss_pred eecccCCeEEEEEc----CCCCEEEEe-eCCCeEEEEeccc-cccc--eeEeecCCCCceEeEEEEEEcCCCcEEEEEcc
Q 038702 28 VLSHKRAVHSAYFS----PSGSSLATT-SFDDTIGIWSGVN-FENT--AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM 99 (154)
Q Consensus 28 ~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~v~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 99 (154)
...+......++++ |+++.++.+ ..++.|.+|+... +... .......... ......++++++|.++++...
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-EGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS-SCEEEEEEEBTTCCEEEEEET
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC-CCCCCceEECCCCCEEEEEcC
Confidence 33445567889999 999765544 5688999999862 2211 1111111110 012335688999998888777
Q ss_pred CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeCC
Q 038702 100 TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 100 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~~ 154 (154)
++.|.+||..+++.+..+..+.. .+..++++| +++ ++++...++.|..|+++
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~--~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFE--KPSNLHFKP-QTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSS--CEEEEEECT-TSSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEcCCCCcEeEEEeCCCC--CceeEEECC-CCCEEEEEeCCCCeEEEEeCC
Confidence 88999999987877776664432 336788888 666 56666677899998863
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.04 E-value=1.5e-08 Score=66.33 Aligned_cols=129 Identities=14% Similarity=0.083 Sum_probs=79.8
Q ss_pred CcEEEEEccCCCCCCCCCceeecc--cCCeEEEEEcCCCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSH--KRAVHSAYFSPSGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
..|.+|++.... ...+..+ ...+..+.|+|+|+.|+.++.+ +.|.+||+.+++........ + .
T Consensus 216 ~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~--~ 285 (396)
T 3c5m_A 216 ARMWLVNEDGSN-----VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---P--C 285 (396)
T ss_dssp CCCEEEETTSCC-----CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---S--E
T ss_pred ceEEEEECCCCc-----eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---C--C
Confidence 457778876543 2222232 2357889999999987776554 45999999876544332211 1 1
Q ss_pred eEEEEEEcC-CCcEEEEEc----------------cCCeEEEecCCCccceeEEeCCCcCC---------cceEEEecCC
Q 038702 81 SSFRAIWGW-DDSCIFIGN----------------MTRTVEVISPAQRRSVATLQSPYISA---------IPCRFHAHPH 134 (154)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~----------------~d~~i~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 134 (154)
. ..|+| +++++++++ .+..|++||+.+++.. .+..+.... ....++|+|
T Consensus 286 ~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~- 360 (396)
T 3c5m_A 286 S---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTP- 360 (396)
T ss_dssp E---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECT-
T ss_pred C---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEcc-
Confidence 1 57899 999887754 2468999999887653 343332211 124568899
Q ss_pred CccEEEEEc-CCCeEEEe
Q 038702 135 QVGTLAGAT-GGGQVYVW 151 (154)
Q Consensus 135 ~~~~l~~~~-~d~~i~~w 151 (154)
+++.|+..+ .++...+|
T Consensus 361 dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp TSSEEEEEECTTSSCEEE
T ss_pred CCCeEEEEecCCCCceEE
Confidence 677766555 45554444
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.04 E-value=7.2e-08 Score=64.01 Aligned_cols=143 Identities=8% Similarity=0.010 Sum_probs=88.4
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCC--eEEEEeccccccceeEeecCC-CCce
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDD--TIGIWSGVNFENTAMIHHNNQ-TGRW 79 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~~~~~~~~~~~~~~~~~~~-~~~~ 79 (154)
+...++.|++||...+. ...+........ ++|+|+++.|+.+..++ .|.+++............... ...
T Consensus 147 ~d~~~~~I~~id~~~g~-----~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~- 219 (409)
T 3hrp_A 147 YQRDDPRVRLISVDDNK-----VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSG- 219 (409)
T ss_dssp EETTTTEEEEEETTTTE-----EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCS-
T ss_pred EecCCCcEEEEECCCCE-----EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcC-
Confidence 44456788888887654 233332233334 99999999988888766 788888776554333311111 111
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeE----EeCCCcCCcce-EEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVAT----LQSPYISAIPC-RFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....++++|++..|+.+..++.|+.||..++..... ..+. ....+. .++++|.++.++++-..++.|+.|+.+
T Consensus 220 -~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~-~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 220 -KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS-LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp -CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC-CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred -CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC-CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 112457889544455567788999999987653222 1111 111113 789999657778888888999999864
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.04 E-value=5.6e-09 Score=74.06 Aligned_cols=115 Identities=12% Similarity=0.010 Sum_probs=75.8
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCe---
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRT--- 102 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--- 102 (154)
|...+..++|||+|++|+.++.+ ..|++||+.+++........ .....++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~------~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW------VKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE------EESCCCEESTT-SEEEEEECCCC---
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC------ceeccEEEECC-CEEEEEEecCcccc
Confidence 33468899999999998877653 46999999988764321111 11124679999 98888776543
Q ss_pred -----------EEEecCCCccce--eEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 103 -----------VEVISPAQRRSV--ATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 103 -----------i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
|++|++.+++.. ..+...........+.|+| ++++|+..+.+ ..|++||+
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~ 301 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARV 301 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEEC
Confidence 889998876532 2233222222236788999 78877766644 38999886
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=1e-08 Score=67.26 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=87.0
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee----------CCCeEEEEeccccccceeEeecC-C
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS----------FDDTIGIWSGVNFENTAMIHHNN-Q 75 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~-~ 75 (154)
++.|.+.|..+.+. ...+..-..+ . +.++|+|++++.++ .++.|.+||..+.+....+.... .
T Consensus 58 ~~~V~ViD~~t~~v----~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 58 VTQQFVIDGEAGRV----IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp SEEEEEEETTTTEE----EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CCEEEEEECCCCeE----EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 57899999987763 2223222333 4 99999999888775 36789999999987765554321 0
Q ss_pred ---CCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEE
Q 038702 76 ---TGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYV 150 (154)
Q Consensus 76 ---~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 150 (154)
.+. ....+.++|+|++++.+.. ++.|.++|+.+++.+.++..... .. ..|.....+++.+.||++.+
T Consensus 132 r~~~g~--~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~-~~P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 132 RFLVGT--YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YH-IFPTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp CCCBSC--CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EE-EEEEETTEEEEEETTSCEEE
T ss_pred ccccCC--CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ce-eecCCCceeEEECCCCCEEE
Confidence 000 1113578999999888764 68999999999999988864321 11 12223345556666666666
Q ss_pred eeC
Q 038702 151 WTS 153 (154)
Q Consensus 151 wd~ 153 (154)
.++
T Consensus 204 v~~ 206 (386)
T 3sjl_D 204 VAF 206 (386)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 199
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=1.5e-11 Score=80.52 Aligned_cols=136 Identities=13% Similarity=0.098 Sum_probs=68.1
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI 80 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (154)
+++++.|+.|+.||..+++. .-.... +.+.+..+..++..+++++.|+.+..||.++++.......... ..+
T Consensus 12 v~~gs~dg~v~a~d~~tG~~----~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~--~~~ 83 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSI----KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP--ELV 83 (369)
T ss_dssp EEEEETTSEEEEEETTTCCE----EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH--HHH
T ss_pred EEEEcCCCEEEEEECCCCCE----EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc--ccc
Confidence 46788999999999988764 222222 4555555566787888888999999999988766433221100 000
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.. ..... .+..+++++.++.++.||.++++.+..+..+. ....+| ++..+++++.|+.|+.||.
T Consensus 84 ~~-sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p-~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 84 QA-SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSP-STSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp TT-CSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCS
T ss_pred cc-CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccc-cCCEEEEEecCCEEEEEEC
Confidence 00 00011 34567788889999999999999887765432 123445 5678888899999999986
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.00 E-value=7e-08 Score=63.31 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=83.9
Q ss_pred cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee----------CCCeEEEEeccccccceeEeec-CC--
Q 038702 9 TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS----------FDDTIGIWSGVNFENTAMIHHN-NQ-- 75 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~-~~-- 75 (154)
.|.++|..+++. .....-...- .+.++|++++++.+. .++.|.++|..+.+........ ..
T Consensus 48 ~v~v~D~~t~~~-----~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSI-----LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeE-----EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 789999887653 3233222222 999999999998886 3678999999877665444321 00
Q ss_pred -CCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCCCccceeE-EeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEe
Q 038702 76 -TGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPAQRRSVAT-LQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVW 151 (154)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~w 151 (154)
.+. ....+.++|+|++|+.++. ++.|.++| .+++.+.. +.... . +.+.|.....+++.+.||++.++
T Consensus 122 ~~g~--~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~----~~~~~~~~~~~~~~~~dg~~~~v 192 (373)
T 2mad_H 122 DVGP--YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--C----YHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred ccCC--CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--e----EEEEeCCCceEEEEcCCCCEEEE
Confidence 000 1125679999999998874 47899999 99988777 54321 1 22333233455666677777666
Q ss_pred eC
Q 038702 152 TS 153 (154)
Q Consensus 152 d~ 153 (154)
|.
T Consensus 193 d~ 194 (373)
T 2mad_H 193 DH 194 (373)
T ss_pred EC
Confidence 53
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.98 E-value=4.6e-07 Score=57.01 Aligned_cols=136 Identities=12% Similarity=0.038 Sum_probs=88.2
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
...++.|.+||. ++. ..... .+...+..++++++++.+++...++.|..+|. +.+.... ..... .. .
T Consensus 116 ~~~~~~i~~~d~-~g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~-~~--~ 184 (299)
T 2z2n_A 116 EMNGNRIGRITD-DGK-----IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTP-AS--G 184 (299)
T ss_dssp ETTTTEEEEECT-TCC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSST-TC--C
T ss_pred ecCCceEEEECC-CCC-----EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCC-CC--c
Confidence 344567777776 332 22221 34457899999999988887777889999998 4433222 11111 11 2
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
...+++++++.++++...++.|..|+. +++.. .+........+..+++++ ++.++++...++.|..||.
T Consensus 185 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 185 PVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET
T ss_pred ceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC
Confidence 335678999998777777889999999 66533 332222223346788888 6777777667889998885
No 202
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.97 E-value=2.2e-08 Score=64.55 Aligned_cols=123 Identities=12% Similarity=0.154 Sum_probs=72.8
Q ss_pred cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC---------------------------CeEEEEec
Q 038702 9 TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD---------------------------DTIGIWSG 61 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~v~~~~~ 61 (154)
.|.+|++..++ ...+..+.. +..+.|+|+|+.|+.++.+ ..|.+||+
T Consensus 86 ~l~~~~~~~g~-----~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 159 (347)
T 2gop_A 86 EIWVADLETLS-----SKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT 159 (347)
T ss_dssp EEEEEETTTTE-----EEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred eEEEEECCCCc-----eEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence 36777776544 344444444 9999999999988887642 56888999
Q ss_pred cccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCC-------eEEEecCCCccceeEEeCCCcCCcceEEEecCC
Q 038702 62 VNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR-------TVEVISPAQRRSVATLQSPYISAIPCRFHAHPH 134 (154)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (154)
.+++....+... . ...+.|+|++ +++++..++ ...+|.+.+++ ...+..+ ... . .++|
T Consensus 160 ~~~~~~~~l~~~-~------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~--~~~-~--~~sp- 224 (347)
T 2gop_A 160 ESEEVIEEFEKP-R------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK--VSF-Y--AVDS- 224 (347)
T ss_dssp TTTEEEEEEEEE-T------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE--ESE-E--EEEE-
T ss_pred CCCeEEeeecCC-C------cccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC--cce-e--eECC-
Confidence 877652222221 1 1256799999 777775432 33444333444 3334322 111 2 3377
Q ss_pred CccEEEEEcCC--------CeEEEee
Q 038702 135 QVGTLAGATGG--------GQVYVWT 152 (154)
Q Consensus 135 ~~~~l~~~~~d--------~~i~~wd 152 (154)
+++.|+..+.+ ..|.+||
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred CCCEEEEEEccccCCccccceEEEEC
Confidence 77777666543 3677775
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=1e-07 Score=60.70 Aligned_cols=139 Identities=11% Similarity=-0.002 Sum_probs=85.4
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
+++..++.|..|+. +++ ...+..+...+..+.++++|+++++...++.|..|+.. ++.......... .....
T Consensus 61 ~~d~~~~~i~~~~~-~g~-----~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~-~~~~~ 132 (305)
T 3dr2_A 61 WSDLVGRRVLGWRE-DGT-----VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG-KRLNS 132 (305)
T ss_dssp EEETTTTEEEEEET-TSC-----EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT-EECSC
T ss_pred EEECCCCEEEEEeC-CCC-----EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC-CccCC
Confidence 45566778888876 322 23333566778999999999977766667889999975 332222211110 00001
Q ss_pred EEEEEEcCCCcEEEE----Ecc-------------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC
Q 038702 82 SFRAIWGWDDSCIFI----GNM-------------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~----~~~-------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 144 (154)
.-.+++.++|+++++ |.. .+.|..+|..+++..... . ......++|+| ++..|..+..
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~--~~~p~gl~~sp-dg~~lyv~~~ 207 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D--LDHPNGLAFSP-DEQTLYVSQT 207 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E--ESSEEEEEECT-TSSEEEEEEC
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c--CCCCcceEEcC-CCCEEEEEec
Confidence 114578999998886 332 256788887766644332 1 12335789999 6776655554
Q ss_pred C------CeEEEeeC
Q 038702 145 G------GQVYVWTS 153 (154)
Q Consensus 145 d------~~i~~wd~ 153 (154)
. +.|.+||+
T Consensus 208 ~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 208 PEQGHGSVEITAFAW 222 (305)
T ss_dssp CC---CCCEEEEEEE
T ss_pred CCcCCCCCEEEEEEe
Confidence 4 78988875
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.95 E-value=6e-07 Score=56.94 Aligned_cols=137 Identities=9% Similarity=-0.032 Sum_probs=82.7
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
+...++.|+.||..++. .........+.+++++++++++++ . +..|.+||..+.+......... .......
T Consensus 30 ~d~~~~~i~~~d~~~~~------~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~ 100 (297)
T 3g4e_A 30 VDIPAKKVCRWDSFTKQ------VQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDN-DKKNNRF 100 (297)
T ss_dssp EETTTTEEEEEETTTCC------EEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCT-TCSSEEE
T ss_pred EECCCCEEEEEECCCCc------EEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCC-CCCCCCC
Confidence 34456778888876543 233455678999999999995554 3 5679999988765443332211 1112233
Q ss_pred EEEEEcCCCcEEEEEcc-----------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEE
Q 038702 83 FRAIWGWDDSCIFIGNM-----------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYV 150 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~ 150 (154)
..++++|+|+++++... .+.|..++.. ++.. .+.. ....+..++|+| +++ ++++.+.++.|.+
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~--~~~~pngi~~sp-dg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFD--QVDISNGLDWSL-DHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEE--EESBEEEEEECT-TSCEEEEEEGGGTEEEE
T ss_pred CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEee--ccccccceEEcC-CCCEEEEecCCCCcEEE
Confidence 46788999997765432 1234444432 3322 2221 112346789999 555 4566777889999
Q ss_pred eeC
Q 038702 151 WTS 153 (154)
Q Consensus 151 wd~ 153 (154)
||+
T Consensus 176 ~~~ 178 (297)
T 3g4e_A 176 FDY 178 (297)
T ss_dssp EEE
T ss_pred Eec
Confidence 975
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.95 E-value=4.6e-08 Score=69.41 Aligned_cols=135 Identities=10% Similarity=-0.017 Sum_probs=82.6
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCe--------------EEEEeccccccc-eeEee
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDT--------------IGIWSGVNFENT-AMIHH 72 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~~~~~~~~~~~-~~~~~ 72 (154)
.+|++||+.+++. .....+...+..++|+|+ +.|+.++.++. |.+|++.+.... .....
T Consensus 189 ~~i~v~dl~tg~~-----~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKP-----LADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp EEEEEEETTTCCE-----EEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred EEEEEEECCCCCC-----CCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 4699999987653 222222222357899999 98888876554 889998776532 22222
Q ss_pred cCCCCceEeEEEEEEcCCCcEEEEEccCC-----eEEEecCCCc--cceeEEeCCCcCCcceEEEecCCCccEEEEEcC-
Q 038702 73 NNQTGRWISSFRAIWGWDDSCIFIGNMTR-----TVEVISPAQR--RSVATLQSPYISAIPCRFHAHPHQVGTLAGATG- 144 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 144 (154)
....... ...+.|+|+|++|+..+.++ .|++||+.++ +....+..+..... .. +.| +++.|+..+.
T Consensus 263 ~~~~~~~--~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~-~~~-dg~~l~~~s~~ 336 (741)
T 1yr2_A 263 TPELPKR--GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW--DF-VDG-VGDQLWFVSGD 336 (741)
T ss_dssp CTTCTTC--EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE--EE-EEE-ETTEEEEEECT
T ss_pred cCCCCeE--EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE--EE-Eec-cCCEEEEEECC
Confidence 1111111 34668999999888877544 8999999876 41455554433332 22 235 5566655553
Q ss_pred ---CCeEEEeeCC
Q 038702 145 ---GGQVYVWTSD 154 (154)
Q Consensus 145 ---d~~i~~wd~~ 154 (154)
++.|.+||++
T Consensus 337 ~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 337 GAPLKKIVRVDLS 349 (741)
T ss_dssp TCTTCEEEEEECS
T ss_pred CCCCCEEEEEeCC
Confidence 4568888863
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.93 E-value=3.5e-07 Score=63.14 Aligned_cols=146 Identities=10% Similarity=-0.016 Sum_probs=92.7
Q ss_pred eeecCCCcEEEEEcc--CCCCCCCCCceeecccCCeEEEEEc----CCCCEEEEeeC-CCeEEEEeccccccceeEeecC
Q 038702 2 ATSSTDGTACIWDLR--SMATDKPEPTKVLSHKRAVHSAYFS----PSGSSLATTSF-DDTIGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~--~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~ 74 (154)
++++.|+.|.+||+. +.+ .............++|+ |+|+++++++. ++++.++|..+.+....+....
T Consensus 212 yv~~~dg~V~viD~~~~t~~-----~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 212 FVIGRDGKVNMIDLWMKEPT-----TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp EEEETTSEEEEEETTSSSCC-----EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE
T ss_pred EEEcCCCeEEEEECCCCCCc-----EeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc
Confidence 456789999999995 333 23333334456899999 69998888765 5899999998877765543211
Q ss_pred C--CC----ceEeEEEEEEcCCCc-EEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEE-EEcCCC
Q 038702 75 Q--TG----RWISSFRAIWGWDDS-CIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLA-GATGGG 146 (154)
Q Consensus 75 ~--~~----~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~ 146 (154)
. .+ .......+..++++. +++....+|.|.++|..+.+.+....-. .......+.|+| ++++++ +...++
T Consensus 287 ~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~p-dgr~~~va~~~sn 364 (567)
T 1qks_A 287 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDG-SHRYFITAANARN 364 (567)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECT-TSCEEEEEEGGGT
T ss_pred cccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECC-CCCEEEEEeCCCC
Confidence 0 00 000222345677654 5555567799999998876533322211 122335678999 666654 455788
Q ss_pred eEEEeeCC
Q 038702 147 QVYVWTSD 154 (154)
Q Consensus 147 ~i~~wd~~ 154 (154)
+|.++|++
T Consensus 365 ~V~ViD~~ 372 (567)
T 1qks_A 365 KLVVIDTK 372 (567)
T ss_dssp EEEEEETT
T ss_pred eEEEEECC
Confidence 99999873
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.93 E-value=1e-06 Score=55.42 Aligned_cols=134 Identities=11% Similarity=0.025 Sum_probs=88.2
Q ss_pred CCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
.++.|.+||.. +. ..... .+...+.+++++++++.+++...++.|..|+... + ...+.... ... ...
T Consensus 34 ~~~~v~~~d~~-~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~-~~~--~~~ 102 (299)
T 2z2n_A 34 KANMISCINLD-GK-----ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG-I-IKEYTLPN-PDS--APY 102 (299)
T ss_dssp TTTEEEEECTT-CC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEECSS-TTC--CEE
T ss_pred CCCcEEEEcCC-CC-----eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c-EEEEeCCC-cCC--Cce
Confidence 35678888876 32 22222 2456789999999999888877788999999762 2 22222111 111 234
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+++.+++.++++...++.|..||. +++.. .+........+..+++++ ++.++++...++.|..||.
T Consensus 103 ~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 103 GITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITE 169 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred eeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC
Confidence 5678899988888777889999998 55433 222222223346788888 6778887777788988875
No 208
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.87 E-value=3.1e-07 Score=57.36 Aligned_cols=142 Identities=9% Similarity=-0.004 Sum_probs=94.2
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeeccc-CCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE-
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHK-RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI- 80 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~- 80 (154)
+...++.+.++|..+.+. ...+... .. ...++++++.++++..++++.+.|..+.+....+..... +..+
T Consensus 81 ~t~~~~~v~viD~~t~~v-----~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-~~p~~ 152 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSN-----IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-GHRVI 152 (266)
T ss_dssp EETTCSEEEEEETTTTEE-----EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-TEECC
T ss_pred EEecCCEEEEEECCCCcE-----EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-Ccccc
Confidence 345678899999887653 3333222 22 233556888777777889999999998776655443211 1111
Q ss_pred eEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCC-----------cCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 81 SSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPY-----------ISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
....+.|. ++..++....++.|.+.|..+++.+..+.... .......++++|....+++++...+++.
T Consensus 153 ~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 11234556 67666666568899999999999888886321 1124478999996667888888889988
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
..++
T Consensus 232 ~i~l 235 (266)
T 2iwa_A 232 EIKL 235 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.84 E-value=6.4e-07 Score=56.87 Aligned_cols=137 Identities=5% Similarity=0.022 Sum_probs=82.5
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceee-----cccCCeEEEEEcCC-CCEEEEeeCCCeEEEEecccccccee-EeecCCC
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVL-----SHKRAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAM-IHHNNQT 76 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~-~~~~~~~ 76 (154)
+..++.|.+||..+++. ..+. ++...+.++.++++ ++++++.. .+.|.+||.. ++.... ..... .
T Consensus 42 ~~~~~~i~~~d~~~g~~-----~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~-~ 113 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKK-----TVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSE-G 113 (314)
T ss_dssp TEECCEEEEECTTTCCE-----EEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTT-S
T ss_pred CCCCCEEEEEeCCCCcE-----EEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCC-C
Confidence 35678899998766542 2222 25577899999999 76555544 4478889987 443222 11110 0
Q ss_pred CceEeEEEEEEcCCCcEEEEEccC---------------CeEEEecCCCccceeEEeCCCcCCcceEEEec----CCCcc
Q 038702 77 GRWISSFRAIWGWDDSCIFIGNMT---------------RTVEVISPAQRRSVATLQSPYISAIPCRFHAH----PHQVG 137 (154)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~d---------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 137 (154)
........++++++++++++...+ +.|..++.. ++...... .. .....++++ | +++
T Consensus 114 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~--~~~~~i~~~~~~d~-dg~ 188 (314)
T 1pjx_A 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AF--QFPNGIAVRHMNDG-RPY 188 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EE--SSEEEEEEEECTTS-CEE
T ss_pred ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-CC--CCcceEEEecccCC-CCC
Confidence 111122356789999888777655 567777765 44332222 11 123567888 8 664
Q ss_pred E-EEEEcCCCeEEEeeC
Q 038702 138 T-LAGATGGGQVYVWTS 153 (154)
Q Consensus 138 ~-l~~~~~d~~i~~wd~ 153 (154)
. +++...++.|.+||+
T Consensus 189 ~l~v~~~~~~~i~~~~~ 205 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYDI 205 (314)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCeEEEEEC
Confidence 4 555567889999984
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.83 E-value=1.9e-06 Score=55.44 Aligned_cols=136 Identities=10% Similarity=-0.125 Sum_probs=81.7
Q ss_pred eecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 3 TSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 3 ~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
+...++.|..||..++. .........+.++.++|+++++++. .+ .|.+||..+++......... .......
T Consensus 66 ~d~~~~~i~~~d~~~~~------~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~-~~~~~~~ 136 (326)
T 2ghs_A 66 FNILERELHELHLASGR------KTVHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELES-DLPGNRS 136 (326)
T ss_dssp EEGGGTEEEEEETTTTE------EEEEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSST-TCTTEEE
T ss_pred EECCCCEEEEEECCCCc------EEEEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCC-CCCCCCC
Confidence 44556778888876543 1223345679999999999877764 44 48899987765433322111 1111233
Q ss_pred EEEEEcCCCcEEEEEcc------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccE-EEEEcCCCeEEEeeC
Q 038702 83 FRAIWGWDDSCIFIGNM------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGT-LAGATGGGQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~~wd~ 153 (154)
..++++|+|+++++... .+.|..++ +++.. .+... ......++|+| +++. +++.+.++.|.+||+
T Consensus 137 ~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~--~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 137 NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD--ISIPNSICFSP-DGTTGYFVDTKVNRLMRVPL 208 (326)
T ss_dssp EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE--ESSEEEEEECT-TSCEEEEEETTTCEEEEEEB
T ss_pred CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC--CcccCCeEEcC-CCCEEEEEECCCCEEEEEEc
Confidence 46788999987765432 24555565 44332 22211 12235788999 6654 455567789999986
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.2e-07 Score=66.89 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=74.2
Q ss_pred ccCCeEEEEEcCCCCEEEEe-----eCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCC----
Q 038702 31 HKRAVHSAYFSPSGSSLATT-----SFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR---- 101 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~-----~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---- 101 (154)
|...+..++|||+|++++.+ +....|+++|+.+++........ +....++|+ |++.|+.+..+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~------~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD------VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE------EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC------ceeccEEEe-CCCEEEEEEecCcccc
Confidence 44568899999999988843 33457999999988754321111 101245799 999888887774
Q ss_pred ---------eEEEecCCCccc--eeEEeCCC-cCCcceEEEecCCCccEEEEEc----CCCeEEEeeC
Q 038702 102 ---------TVEVISPAQRRS--VATLQSPY-ISAIPCRFHAHPHQVGTLAGAT----GGGQVYVWTS 153 (154)
Q Consensus 102 ---------~i~i~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~----~d~~i~~wd~ 153 (154)
.|++|++.++.. ...+.... .......+.++| ++++|+... ....|+++|+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEET
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEEC
Confidence 399999887653 22232222 122235788999 677664333 2358899886
No 212
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=6.8e-10 Score=72.66 Aligned_cols=134 Identities=14% Similarity=0.019 Sum_probs=66.0
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecc-cCCeE-EEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCce
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSH-KRAVH-SAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~-~~~v~-~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
++++.|+.|+.||..+++. ......+ ...+. +..+. .+..+++++.++.+..||.++++....+....
T Consensus 53 v~~s~dg~l~a~d~~tG~~----~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----- 122 (369)
T 2hz6_A 53 LPDPNDGSLYTLGSKNNEG----LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----- 122 (369)
T ss_dssp EECTTTCCEEEC-----CC----SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-----------------
T ss_pred EEeCCCCEEEEEECCCCce----eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----
Confidence 4567899999999987664 2111111 11110 00111 34567888899999999999887754433211
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCC--CccEEEEEcCCCeEEEeeC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPH--QVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~~wd~ 153 (154)
...++|++..+++++.++.|+.||.++++.+..+..... ....+.+. ....++.++.||.++.||.
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCCEEEEEEC
Confidence 112456788899999999999999999987766542211 11222220 0145667888999999986
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=3e-07 Score=64.88 Aligned_cols=140 Identities=9% Similarity=0.023 Sum_probs=83.2
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCC-------------eEEEEeccccccce-e
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDD-------------TIGIWSGVNFENTA-M 69 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~v~~~~~~~~~~~~-~ 69 (154)
|++...|++||+.+++. ....-+......++|+ |++.|+.++.+. .|.+|++.+..... .
T Consensus 151 G~~~~~i~v~dl~tg~~-----~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 224 (693)
T 3iuj_A 151 GSDWREIHLMDVESKQP-----LETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRL 224 (693)
T ss_dssp SCCEEEEEEEETTTCSE-----EEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEE
T ss_pred CCceEEEEEEECCCCCC-----CccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceE
Confidence 44456799999988762 2221111113567899 999998888774 39999988765432 2
Q ss_pred EeecCC-CCceEeEEEEEEcCCCcEEEEEcc----CCeEEEecCCCcc-ceeEEeCCCcCCcceEEEecCCCccEEEEEc
Q 038702 70 IHHNNQ-TGRWISSFRAIWGWDDSCIFIGNM----TRTVEVISPAQRR-SVATLQSPYISAIPCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 70 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 143 (154)
+..... +. .....+.|+|++++|+.... ++.|+++|+.+++ ....+..+..... .. +.+..+.+++...
T Consensus 225 v~~~~~~~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~--~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 225 VFGAIPAQH--HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV--SL-VDNKGSTLYLLTN 299 (693)
T ss_dssp EESCSGGGC--CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE--EE-EEEETTEEEEEEC
T ss_pred EEecCCCCC--eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE--EE-EeccCCEEEEEEC
Confidence 222111 11 12345679999998865442 2589999998764 3445554333322 22 4442445555555
Q ss_pred CC---CeEEEeeCC
Q 038702 144 GG---GQVYVWTSD 154 (154)
Q Consensus 144 ~d---~~i~~wd~~ 154 (154)
.+ +.|..+|++
T Consensus 300 ~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 300 RDAPNRRLVTVDAA 313 (693)
T ss_dssp TTCTTCEEEEEETT
T ss_pred CCCCCCEEEEEeCC
Confidence 43 578888763
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.80 E-value=1.8e-06 Score=54.74 Aligned_cols=111 Identities=5% Similarity=-0.047 Sum_probs=71.7
Q ss_pred ecccCCeEEEEEcCCCCEEE-EeeCCCeEEEEecc--ccccc--eeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeE
Q 038702 29 LSHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGV--NFENT--AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTV 103 (154)
Q Consensus 29 ~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 103 (154)
..+......++|+|+++.++ +.+.++.|..|++. ++... ..+........ ..-.+++.++|++.++....+.|
T Consensus 145 ~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~--~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ--IPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC--EEEEEEEBTTSCEEEEEETTTEE
T ss_pred eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC--CCCeeEECCCCCEEEEEcCCCEE
Confidence 34445668999999998664 45567899999873 33221 11111111111 22356789999888887778889
Q ss_pred EEecCCCccceeEEeCCCcCCcceEEEec-CCCcc-EEEEEcC
Q 038702 104 EVISPAQRRSVATLQSPYISAIPCRFHAH-PHQVG-TLAGATG 144 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~~ 144 (154)
..||..+++.+..+..+... +..++|. | +.+ ++++...
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~--~t~~~f~g~-d~~~L~vt~~~ 262 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDK--TTSCCFGGK-NYSEMYVTCAR 262 (297)
T ss_dssp EEECTTTCCEEEEEECSSSB--EEEEEEESG-GGCEEEEEEBC
T ss_pred EEEcCCCceEEEEEECCCCC--ceEEEEeCC-CCCEEEEEcCC
Confidence 99999999988888755322 3578887 5 444 4455543
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.80 E-value=2.8e-06 Score=53.44 Aligned_cols=134 Identities=13% Similarity=0.005 Sum_probs=86.6
Q ss_pred CCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
.++.|..+|.. ++ ..... .....+.++++.++++.+++...++.|..++.. .+... ..... ... ...
T Consensus 81 ~~~~v~~~d~~-g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~-~~~--~~~ 149 (300)
T 2qc5_A 81 GANKIGKLSKK-GG-----FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN-KGS--YPA 149 (300)
T ss_dssp TTTEEEEECTT-SC-----EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSS-TTC--CEE
T ss_pred CCCeEEEECCC-CC-----eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCC-CCC--Cce
Confidence 35667777765 32 22121 234678999999999988887778899999886 33222 11111 111 234
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+++.++++++++...++.|..++. +++... +........+..+++++ ++.++++....+.|.+||.
T Consensus 150 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 150 FITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred eEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC
Confidence 5678899997777776789999998 555433 33222223346788888 6777777777788988875
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.80 E-value=3.2e-07 Score=61.10 Aligned_cols=104 Identities=14% Similarity=0.072 Sum_probs=74.0
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee----------CCCeEEEEeccccccceeEeec--CC
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS----------FDDTIGIWSGVNFENTAMIHHN--NQ 75 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~--~~ 75 (154)
+.|.++|..+.+. ...+.--..+ .+.++|++++++.+. .++.|.++|..+.+....+... ..
T Consensus 99 ~~VsVID~~t~~v----v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDGSTGRI----LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEETTTTEE----EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred CeEEEEECCCCEE----EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 6899999988763 2233222234 899999999888876 4678999999998776554432 00
Q ss_pred --CCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCCCccceeEEeC
Q 038702 76 --TGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPAQRRSVATLQS 119 (154)
Q Consensus 76 --~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~ 119 (154)
.+. ....+.++|++++++.+.. ++.|.+.|+.+++.+.++..
T Consensus 173 ~~~g~--~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 173 FLVGT--YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCBSC--CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cccCC--CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 000 0113468999999998864 57899999999998888774
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.79 E-value=1.8e-06 Score=57.38 Aligned_cols=138 Identities=12% Similarity=0.007 Sum_probs=84.2
Q ss_pred cEEEEEccCCCCCCCCCcee---ec-ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE-
Q 038702 9 TACIWDLRSMATDKPEPTKV---LS-HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF- 83 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~---~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (154)
.|.+++...... .... .. ....+.+++++|++..|+.+..++.|..||..+...................+
T Consensus 195 ~I~~~d~~~~~~----~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 195 TVYVYMKASGWA----PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEEEEGGGTTC----EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred eEEEEEcCCCce----eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 677777654432 1111 12 44567889999955555557778899999998765332211100000001112
Q ss_pred EEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCC-------------cCCcceEEEecCCCccEEEEEc-CCCeE
Q 038702 84 RAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPY-------------ISAIPCRFHAHPHQVGTLAGAT-GGGQV 148 (154)
Q Consensus 84 ~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~-~d~~i 148 (154)
.++|+|+ +.++++-..++.|+.|+.... +..+.+.. ....+..++++| +++++++-. .++.|
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCL 347 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEE
Confidence 5688995 666677777889999987643 33332221 012356889999 778888888 88999
Q ss_pred EEeeC
Q 038702 149 YVWTS 153 (154)
Q Consensus 149 ~~wd~ 153 (154)
+.||+
T Consensus 348 ~~~~~ 352 (409)
T 3hrp_A 348 RKLDI 352 (409)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99983
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=4.5e-07 Score=59.58 Aligned_cols=108 Identities=19% Similarity=0.060 Sum_probs=79.7
Q ss_pred EEcCCCCEEEEeeC-----CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc----------cCCeE
Q 038702 39 YFSPSGSSLATTSF-----DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN----------MTRTV 103 (154)
Q Consensus 39 ~~~~~~~~l~~~~~-----d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i 103 (154)
...|+++.++.... ++.|.+.|..+.+....+..... . .++++|++++++.++ .++.|
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P------~va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P------NPVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C------EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C------cEEECCCCCEEEEEcccccccccCCCCCEE
Confidence 44688988888765 67999999998887766654332 1 257899999887775 36789
Q ss_pred EEecCCCccceeEEeCCC-----cCCcceEEEecCCCccEEEEEcC--CCeEEEeeCC
Q 038702 104 EVISPAQRRSVATLQSPY-----ISAIPCRFHAHPHQVGTLAGATG--GGQVYVWTSD 154 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~--d~~i~~wd~~ 154 (154)
.+||..+.+.+.++.... ....+..+.++| +++++..+.. ++.|.++|++
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETT
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECC
Confidence 999999999888876322 112345689999 7777766653 6899999973
No 219
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.72 E-value=7.9e-06 Score=51.36 Aligned_cols=135 Identities=10% Similarity=-0.012 Sum_probs=88.1
Q ss_pred cCCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
..++.|.+||.. ++ ..... .....+..++++++++.+++...++.|..+|.. .+.. .+.... ... ..
T Consensus 38 ~~~~~v~~~~~~-~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~-~~~--~~ 106 (300)
T 2qc5_A 38 HKANKISSLDQS-GR-----IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQ-PDS--GP 106 (300)
T ss_dssp TTTTEEEEECTT-SC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSS-TTC--CE
T ss_pred CCCCeEEEECCC-Cc-----eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCC-CCC--CC
Confidence 345677778765 32 22211 234678999999999988877778899999987 3332 222111 111 23
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+++.+++.++++...++.|..++.. ++.. .+........+..+++++ +++++++...++.|..+|.
T Consensus 107 ~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred ccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC
Confidence 456788999988887778899999987 5443 232222223346788888 6777777777788888875
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.71 E-value=4e-06 Score=56.07 Aligned_cols=146 Identities=10% Similarity=0.143 Sum_probs=93.0
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeec-------cc-CCeEEEEEcCCCCEEEEeeCC------CeEEEEeccccccc
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLS-------HK-RAVHSAYFSPSGSSLATTSFD------DTIGIWSGVNFENT 67 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~-------~~-~~v~~~~~~~~~~~l~~~~~d------~~v~~~~~~~~~~~ 67 (154)
++|-.++.|.++|+.+.... ++..+... .. ..-..+...|+| .++++..+ +.+.+.|..+.+..
T Consensus 100 v~~l~s~~I~viD~~t~p~~-p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 100 VPGLRSSRIYIIDTKPNPRE-PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp EEBTTTCCEEEEECCSCTTS-CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEE
T ss_pred EccCCCCeEEEEECCCCCCC-ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEE
Confidence 56778899999999754321 22333331 11 245667888999 76666555 78999999988776
Q ss_pred eeEeecCCCCceEeEEEEEEcCCCcEEEEEc-------------------cCCeEEEecCCCccceeEEeCCCcCCcceE
Q 038702 68 AMIHHNNQTGRWISSFRAIWGWDDSCIFIGN-------------------MTRTVEVISPAQRRSVATLQSPYISAIPCR 128 (154)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (154)
......... ....+.+.|+|+++.++++. .+..|.+||+.+++.+.++........+..
T Consensus 178 ~~~~~~~~~--~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~ 255 (462)
T 2ece_A 178 GKWEIDRGD--QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALE 255 (462)
T ss_dssp EECCSBCTT--CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEE
T ss_pred EEEccCCCC--ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccce
Confidence 555422111 11223456899999888874 367999999999888888875322223333
Q ss_pred --EEecCCCccEEE-EEc-----CCCeEEEee
Q 038702 129 --FHAHPHQVGTLA-GAT-----GGGQVYVWT 152 (154)
Q Consensus 129 --~~~~~~~~~~l~-~~~-----~d~~i~~wd 152 (154)
++++| ++.++. ++. .+++|.+|.
T Consensus 256 i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 256 LRPLHDP-TKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp EEECSST-TCCEEEEEEEEETTTCCEEEEEEE
T ss_pred eEeeECC-CCCEEEEEEeeeccCCCceEEEEE
Confidence 45598 555544 444 566776654
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=4.7e-07 Score=59.26 Aligned_cols=99 Identities=15% Similarity=0.060 Sum_probs=68.0
Q ss_pred cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee----------CCCeEEEEeccccccceeEeecCCC--
Q 038702 9 TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS----------FDDTIGIWSGVNFENTAMIHHNNQT-- 76 (154)
Q Consensus 9 ~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~~-- 76 (154)
.|.++|..+++. ...+..-..+ .+.++|++++++.+. .++.|.+||+.+.+....+......
T Consensus 47 ~vsvID~~t~~v----~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCGVT----LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTTEE----EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECCCCeE----EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence 788999888763 3333322234 799999999888886 3788999999998887665432000
Q ss_pred --CceEeEEEEEEcCCCcEEEEEcc--CCeEEE--ecCCCccceeEEe
Q 038702 77 --GRWISSFRAIWGWDDSCIFIGNM--TRTVEV--ISPAQRRSVATLQ 118 (154)
Q Consensus 77 --~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i--~~~~~~~~~~~~~ 118 (154)
+. ....+.++|+|++++.+.. +..+.+ +|..+ +..+.
T Consensus 121 ~~g~--~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~ 163 (368)
T 1mda_H 121 SVGP--RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK 163 (368)
T ss_dssp CBSC--CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE
T ss_pred ccCC--CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE
Confidence 00 0113578999999998864 467888 99987 44454
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.62 E-value=1.4e-05 Score=49.73 Aligned_cols=136 Identities=10% Similarity=-0.004 Sum_probs=88.3
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceE-eE
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWI-SS 82 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~ 82 (154)
...++.+.++|..+.+. ...+.....=..++ +++..|+.+..++.|.++|.++.+....+..... +..+ ..
T Consensus 112 tw~~~~v~V~D~~Tl~~-----~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~-g~~v~~l 183 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQR-----ERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR-GQPVELI 183 (268)
T ss_dssp ESSSCEEEEEETTTTEE-----EEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEET-TEECCCE
T ss_pred EccCCEEEEEECCcCcE-----EEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC-Ccccccc
Confidence 44678899999887663 33332222223333 5788888888899999999998877655543221 1111 11
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC-----------CcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP-----------YISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
-.+.|. +|+.++..-.+..|.+.|.++++.+..+... ........++++|....++++|-.-..+
T Consensus 184 NeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~ 259 (268)
T 3nok_A 184 NELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRL 259 (268)
T ss_dssp EEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEE
T ss_pred cccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCce
Confidence 123444 7766666556889999999999988887632 1223457899999777888888654443
No 223
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.62 E-value=7.3e-06 Score=51.04 Aligned_cols=134 Identities=12% Similarity=0.048 Sum_probs=86.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEE--EEEcCCCCEEEE-eeCCCeEEEEeccccccceeEeecCCCCc
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHS--AYFSPSGSSLAT-TSFDDTIGIWSGVNFENTAMIHHNNQTGR 78 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~-~~~d~~v~~~~~~~~~~~~~~~~~~~~~~ 78 (154)
.+.+.+|.|+++|+.+++. .... -...... +.+ .++.|+. .-.++.+.++|..+.+....+.... .+
T Consensus 69 ~stG~~g~v~~iD~~Tgkv----~~~~--l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eG- 138 (268)
T 3nok_A 69 ESTGHQGTLRQLSLESAQP----VWME--RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EG- 138 (268)
T ss_dssp EEETTTTEEEECCSSCSSC----SEEE--ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CC-
T ss_pred EEcCCCCEEEEEECCCCcE----EeEE--CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ce-
Confidence 4667788899999998874 3333 2233333 444 4444444 4468899999999988877666532 22
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcC---CcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYIS---AIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. .+ .++++.|+.+..++.|+++|..+.+.+.++.-...+ .....+.|. ++.+++....+..|.+.|+
T Consensus 139 --w--GL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 139 --W--GL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp --C--CE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEECT
T ss_pred --e--EE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEeC
Confidence 1 11 246777777777889999999999988877642211 111344555 4566666666778888775
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.60 E-value=2.1e-05 Score=51.65 Aligned_cols=113 Identities=7% Similarity=-0.042 Sum_probs=71.0
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEeccccccceeEee--cCC----CC-ceEeEEEEEEcCCCcEEEEEcc----------C
Q 038702 38 AYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHH--NNQ----TG-RWISSFRAIWGWDDSCIFIGNM----------T 100 (154)
Q Consensus 38 ~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~--~~~----~~-~~~~~~~~~~~~~~~~l~~~~~----------d 100 (154)
..+.+++..++..+..+.+.+.|+........... ... .+ .......+.++|+++.++.... .
T Consensus 218 ~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 218 PAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred ceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC
Confidence 34566555555445778888888865432211110 000 00 0000112567899887777543 3
Q ss_pred CeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEc-CCCeEEEeeCC
Q 038702 101 RTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGAT-GGGQVYVWTSD 154 (154)
Q Consensus 101 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~d~~i~~wd~~ 154 (154)
+.|.++|..+++.+.++.... .+..+.++| +++ +++++. .++.|.++|++
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGH---DVDAISVAQ-DGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CeEEEEECCCCEEEEEEECCC---CcCeEEECC-CCCeEEEEEcCCCCeEEEEECC
Confidence 579999999999988886433 236789999 666 677776 58999999973
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=1.3e-05 Score=49.92 Aligned_cols=135 Identities=8% Similarity=0.085 Sum_probs=86.3
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
...++.+.++|..+.+ ....+.... ....+++++..|+.+..++.|.++|..+.+....+.... .+..+..+
T Consensus 103 tw~~~~v~v~D~~t~~-----~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g~~~~~l 174 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLR-----QVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HGEELPEL 174 (262)
T ss_dssp ESSSSEEEEEETTTCC-----EEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE-TTEECCCE
T ss_pred EeeCCEEEEEECccCc-----EEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CCcccccc
Confidence 3457889999988766 333332222 222334577878877778899999999887665544321 11111111
Q ss_pred -EEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC----------CcCCcceEEEecCCCccEEEEEcCCCe
Q 038702 84 -RAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP----------YISAIPCRFHAHPHQVGTLAGATGGGQ 147 (154)
Q Consensus 84 -~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~d~~ 147 (154)
.+.|. +|+.++..-.++.|.+.|.++++.+..+... ........++++|....++++|-.-..
T Consensus 175 NELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~ 248 (262)
T 3nol_A 175 NELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPK 248 (262)
T ss_dssp EEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred ceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 23444 6776666667889999999999988887642 112344789999966677788765443
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.58 E-value=4.1e-06 Score=59.14 Aligned_cols=81 Identities=7% Similarity=0.005 Sum_probs=52.3
Q ss_pred CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecC
Q 038702 54 DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHP 133 (154)
Q Consensus 54 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (154)
+.|..||+.+++..-......... ...+...+..++.++.|+.+++||.++++.+..+..... ....-+.+.+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~------~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~-~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWN------GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG-VVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC------CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCc------CcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC-cccCCEEEEe
Confidence 779999998887665544332110 112345677888899999999999999999999885432 2223345544
Q ss_pred CCccEEEE
Q 038702 134 HQVGTLAG 141 (154)
Q Consensus 134 ~~~~~l~~ 141 (154)
....+++.
T Consensus 530 ~G~~~v~~ 537 (677)
T 1kb0_A 530 DGRQYVSV 537 (677)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 23344444
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.54 E-value=2.8e-06 Score=60.04 Aligned_cols=84 Identities=6% Similarity=-0.043 Sum_probs=53.6
Q ss_pred CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEec
Q 038702 53 DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAH 132 (154)
Q Consensus 53 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (154)
+|.+..||+.+++..-......... ...+...+.+++.++.|+.++.||.++++.+..++.+.... ..-+.+.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~------~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~-~~p~ty~ 526 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFN------GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM-AAPVTYS 526 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCC------CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCcc------CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc-cCceEEE
Confidence 3778899998887665444322111 11234467788999999999999999999998887543322 2334554
Q ss_pred CCCccEEEEEc
Q 038702 133 PHQVGTLAGAT 143 (154)
Q Consensus 133 ~~~~~~l~~~~ 143 (154)
.+..+++++.+
T Consensus 527 ~~G~qyv~~~~ 537 (689)
T 1yiq_A 527 VDGEQYVTFMA 537 (689)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 42334555443
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.50 E-value=8.5e-06 Score=50.65 Aligned_cols=136 Identities=10% Similarity=0.080 Sum_probs=85.2
Q ss_pred eecCCC--cEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee-CCCeEEEEeccccccceeEeecCCCCce
Q 038702 3 TSSTDG--TACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFENTAMIHHNNQTGRW 79 (154)
Q Consensus 3 ~~~~d~--~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (154)
+.+.+| .|+++|+.+++. .....-.......-..+.++.+.... .++.+.++|..+.+....+.... .+
T Consensus 58 stG~~g~S~v~~vD~~Tgkv-----~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG-- 129 (262)
T 3nol_A 58 STGLNGRSSIRKVDIESGKT-----LQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EG-- 129 (262)
T ss_dssp EEEETTEEEEEEECTTTCCE-----EEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CC--
T ss_pred ECCCCCCceEEEEECCCCcE-----EEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cc--
Confidence 344444 899999988763 33332233333333333455655554 58899999999988877666533 22
Q ss_pred EeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc--C-CcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 80 ISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI--S-AIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
. . .++++..|+.+..++.|.++|..+.+.+..+..... . .....+.+. ++.+++..-.+..|.+.|+
T Consensus 130 -~--g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 130 -W--G--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp -C--C--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEECT
T ss_pred -e--E--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEEEEC
Confidence 1 1 234677777766678899999999998888764221 1 111234554 4566666667778888775
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=1.6e-05 Score=51.47 Aligned_cols=121 Identities=5% Similarity=-0.080 Sum_probs=77.2
Q ss_pred CCeEEEEEcCCCCEEEEeeC--CCeEEEEeccccccceeEee--cCCCCceEeEEEEEEcCCCcEEEEEcc-----CCeE
Q 038702 33 RAVHSAYFSPSGSSLATTSF--DDTIGIWSGVNFENTAMIHH--NNQTGRWISSFRAIWGWDDSCIFIGNM-----TRTV 103 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~--d~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~-----d~~i 103 (154)
.....++++|+|+.+++... ++.+++|.+.+++ ...+.. ............++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999999888642 3435555554332 111110 111122345667889999887766543 5789
Q ss_pred EEecCCCccceeEEeCCCc----CCcceEEEecCCCccEEEEEc---CCCeEEEeeCC
Q 038702 104 EVISPAQRRSVATLQSPYI----SAIPCRFHAHPHQVGTLAGAT---GGGQVYVWTSD 154 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~---~d~~i~~wd~~ 154 (154)
.+||+.+++.+..+..+.. ......++++|.++..+++.. .++.|.+||++
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 9999999887776653211 122357888874455666665 67899999863
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.48 E-value=3.8e-05 Score=48.08 Aligned_cols=132 Identities=9% Similarity=-0.031 Sum_probs=83.8
Q ss_pred CCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEEe-eCCCeEEEEeccccccceeEeecCCCCceEeEEE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATT-SFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFR 84 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
++.|++.|+.+++. ..... +.......+.+. +..++.+ -.++.+.++|..+.+....+......+ .
T Consensus 43 ~s~v~~iD~~tg~v----~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g---~--- 110 (266)
T 2iwa_A 43 RSSVRQVALQTGKV----ENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG---W--- 110 (266)
T ss_dssp TCEEEEEETTTCCE----EEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC---C---
T ss_pred CCEEEEEECCCCCE----EEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe---E---
Confidence 57899999988763 22221 222222344553 5455544 458899999999887776655431222 1
Q ss_pred EEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCc--C-CcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 85 AIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYI--S-AIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+++++.++++..++.|.++|..+.+.+..+.-... . .....+.+. ++.+++....++.|.+.|+
T Consensus 111 -glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 111 -GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp -EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEET
T ss_pred -EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEEC
Confidence 1345787777777788999999999988887763221 1 112455665 4566666667788888876
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.46 E-value=4.1e-05 Score=48.68 Aligned_cols=111 Identities=11% Similarity=-0.014 Sum_probs=67.3
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCC------CeEEEEeccccccc--eeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCe
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFD------DTIGIWSGVNFENT--AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRT 102 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d------~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 102 (154)
.......++|+|+++.|+.+... +.|..|++...... ..+... ..+. .-.+++.++|++.++ ..+ .
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~---pdgi~~d~~G~lwv~-~~~-g 259 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGL---PDGFCVDRGGWLWSS-SGT-G 259 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSC---CCSEEECTTSCEEEC-CSS-E
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCC---CCeEEECCCCCEEEe-cCC-c
Confidence 44566789999999987777654 68999998754311 111110 0110 113467889985544 444 5
Q ss_pred EEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 103 VEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 103 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
|.+|+. +++.+..+..+. . +..++|.| +++.|..++.++ +..+++
T Consensus 260 v~~~~~-~g~~~~~~~~~~-~--~~~~~f~~-d~~~L~it~~~~-l~~~~~ 304 (305)
T 3dr2_A 260 VCVFDS-DGQLLGHIPTPG-T--ASNCTFDQ-AQQRLFITGGPC-LWMLPL 304 (305)
T ss_dssp EEEECT-TSCEEEEEECSS-C--CCEEEECT-TSCEEEEEETTE-EEEEEC
T ss_pred EEEECC-CCCEEEEEECCC-c--eeEEEEeC-CCCEEEEEcCCe-EEEEEC
Confidence 999998 567777776443 2 35678887 666666666554 444443
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.45 E-value=5.1e-05 Score=46.75 Aligned_cols=136 Identities=12% Similarity=0.092 Sum_probs=86.8
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeE-
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS- 82 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (154)
...++.+.++|..+.+ ....+.....=..++ +++..|+.+..++.|.++|..+.+....+.... .+..+..
T Consensus 81 tw~~~~v~v~D~~tl~-----~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~l 152 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLT-----PRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNL 152 (243)
T ss_dssp ESSSSEEEEEETTTTE-----EEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCE
T ss_pred EeeCCEEEEEECCcCc-----EEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCcccccc
Confidence 4567889999988766 333333322223443 577777777789999999999887665544321 1111111
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC-----------CcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP-----------YISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
-.+.|. +|+.++..-.+..|.+.|.++++.+..+... ........++++|....++++|-.=..+
T Consensus 153 NeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~ 228 (243)
T 3mbr_X 153 NELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPML 228 (243)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEE
T ss_pred eeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcE
Confidence 122333 6766666556789999999999988887632 1223457899999777788888654443
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.44 E-value=7.9e-05 Score=48.68 Aligned_cols=134 Identities=16% Similarity=0.048 Sum_probs=83.5
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
..++.++.+..+|..+++. .-... ......+.. ++..++.++.++.+..+|..+++.......... . ...
T Consensus 243 ~~~~~~g~l~~~d~~tG~~-----~w~~~-~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~-~~~ 312 (376)
T 3q7m_A 243 FALAYNGNLTALDLRSGQI-----MWKRE-LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-R-LLT 312 (376)
T ss_dssp EEECTTSCEEEEETTTCCE-----EEEEC-CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-S-CCC
T ss_pred EEEecCcEEEEEECCCCcE-----Eeecc-CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-C-ccc
Confidence 4566788899999877653 21111 222333333 466788888899999999988875533321111 0 111
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.. .. .+..++.++.+|.+..+|.++++.+........... ...... +..|..++.+|.|+.||.
T Consensus 313 ~~--~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~-~~~~~~---~~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 313 SP--VL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQ-TEPVAA---DGKLLIQAKDGTVYSITR 376 (376)
T ss_dssp CC--EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBC-SCCEEE---TTEEEEEBTTSCEEEEEC
T ss_pred CC--EE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcce-eCCEEE---CCEEEEEeCCCEEEEEeC
Confidence 11 11 256788888999999999999998877764322222 222222 356778899999999873
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=3.1e-05 Score=51.86 Aligned_cols=141 Identities=11% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCcEEEEEccCCCCCCCCCceee-c-cc-CCeEEEEEcCCCCEEEEee-------------------CCCeEEEEecccc
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL-S-HK-RAVHSAYFSPSGSSLATTS-------------------FDDTIGIWSGVNF 64 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~-~-~~-~~v~~~~~~~~~~~l~~~~-------------------~d~~v~~~~~~~~ 64 (154)
.+.|.+.|..+.+. ..... + .. ..-..+-|+|+++.++++. .+.+|.+||+.+.
T Consensus 163 ~g~v~vlD~~T~~v----~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 163 PGGILMLDHYSFEP----LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CCEEEEECTTTCCE----EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCeEEEEECCCCeE----EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 36788888876653 22221 1 11 2234688899999888884 4789999999876
Q ss_pred ccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc------CCeEEEecCCCcc--ceeEEeCCC---------------
Q 038702 65 ENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM------TRTVEVISPAQRR--SVATLQSPY--------------- 121 (154)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~i~~~~~~~--~~~~~~~~~--------------- 121 (154)
+....+..... +..-.-+.++++|++++++.++. +++|.+|....++ ..+.+....
T Consensus 239 k~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 239 KRIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp EEEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred cEeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 54443333211 11112223345999998877774 5577766544332 112111000
Q ss_pred -cCCcceEEEecCCCccEE-EEEcCCCeEEEeeC
Q 038702 122 -ISAIPCRFHAHPHQVGTL-AGATGGGQVYVWTS 153 (154)
Q Consensus 122 -~~~~~~~~~~~~~~~~~l-~~~~~d~~i~~wd~ 153 (154)
....+..+.++| ++++| ++.-..+.|.+||+
T Consensus 318 ~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 318 AVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EECCCCCCEEECT-TSCEEEEEETTTTEEEEEEC
T ss_pred cCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEe
Confidence 013346788999 66655 44456889999987
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.37 E-value=3.4e-05 Score=53.35 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=82.6
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCC-------------------------------
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDD------------------------------- 54 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------------- 54 (154)
.++.+.+.|..+.+. .....-.+....++++|+|+++++.+.+.
T Consensus 173 ~~~~vtvID~~t~~v-----~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 173 YVNVFTAVDADKWEV-----AWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp EEEEEEEEETTTTEE-----EEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred cCceEEEEECCCCeE-----EEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 355788888876552 22222222446678999999998888653
Q ss_pred -------eEEEEeccc--ccc-ceeEeecCCCCceEeEEEEEEcCCCcEEEEEc-cCCeEEEecCCCccce---------
Q 038702 55 -------TIGIWSGVN--FEN-TAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN-MTRTVEVISPAQRRSV--------- 114 (154)
Q Consensus 55 -------~v~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~~--------- 114 (154)
.|.+.|.++ ... ...+.... ....+.++|||++++.++ .+.+|.++|+.+.+..
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~------~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSLFTRYIPIAN------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS 321 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCSSEEEEEEES------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGG
T ss_pred CCeeEECcEEEEeCcccCCceeEEEEecCC------CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCccc
Confidence 244444444 111 11111111 111367899999876665 6778999999865310
Q ss_pred eEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 115 ATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
........+.-+..++|+| ++...++.-.|+.|..||+
T Consensus 322 ~v~~~v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 322 AVVAEPELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp GEEECCBCCSCEEEEEECT-TSEEEEEETTTTEEEEEEH
T ss_pred ceEEEcCCCCCcceEEECC-CCeEEEEEecCCcEEEEEh
Confidence 0111122233357889999 6766777789999999996
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.37 E-value=1.6e-05 Score=53.16 Aligned_cols=105 Identities=15% Similarity=0.023 Sum_probs=75.4
Q ss_pred CCCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc----------cCCeEEEe
Q 038702 42 PSGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN----------MTRTVEVI 106 (154)
Q Consensus 42 ~~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~ 106 (154)
++++.++..... +.|.+.|..+.+....+..... . .++++|++++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~------P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL------P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS------C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC------C-ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 466766665542 6999999999888766654332 2 467899999888876 36789999
Q ss_pred cCCCccceeEEeCC--Cc---CCcceEEEecCCCccEEEEEcC--CCeEEEeeCC
Q 038702 107 SPAQRRSVATLQSP--YI---SAIPCRFHAHPHQVGTLAGATG--GGQVYVWTSD 154 (154)
Q Consensus 107 ~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~~~--d~~i~~wd~~ 154 (154)
|..+.+.+..+... .. ...+..+.++| +++++..+.. ++.|.+.|+.
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~ 208 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLE 208 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETT
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECC
Confidence 99999988887632 10 12234678999 7777777653 5789999873
No 237
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.35 E-value=0.00013 Score=46.89 Aligned_cols=110 Identities=9% Similarity=-0.048 Sum_probs=68.2
Q ss_pred cccCCeEEEEEcCCCCEEEEe-eCCCeEEEEecc--cc-ccc--eeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeE
Q 038702 30 SHKRAVHSAYFSPSGSSLATT-SFDDTIGIWSGV--NF-ENT--AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTV 103 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~~~~~--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 103 (154)
.+......++|+|+++.++.+ +.++.|.+|++. ++ ... ..+........ ..-.+++.++|.++++...++.|
T Consensus 176 ~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~--~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 176 ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG--GMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS--EEEEEEECTTSCEEEEEETTTEE
T ss_pred CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC--CCCeeEECCCCCEEEEEeCCCEE
Confidence 344567789999999876554 557899999986 33 221 12221111111 12356788999877776667889
Q ss_pred EEecCCCccceeEEeCCCcCCcceEEEec-CCCcc-EEEEEcCC
Q 038702 104 EVISPAQRRSVATLQSPYISAIPCRFHAH-PHQVG-TLAGATGG 145 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~~d 145 (154)
..|+. +++.+..+..+.. .+..++|. | ++. ++++...+
T Consensus 254 ~~~d~-~g~~~~~i~~~~~--~~~~~af~g~-d~~~L~vt~~~~ 293 (326)
T 2ghs_A 254 DRYDT-DGNHIARYEVPGK--QTTCPAFIGP-DASRLLVTSARE 293 (326)
T ss_dssp EEECT-TCCEEEEEECSCS--BEEEEEEEST-TSCEEEEEEBCT
T ss_pred EEECC-CCCEEEEEECCCC--CcEEEEEecC-CCCEEEEEecCC
Confidence 99998 5676666664432 23678887 6 544 44555444
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.32 E-value=0.00011 Score=45.22 Aligned_cols=131 Identities=11% Similarity=0.013 Sum_probs=80.8
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEe-eCCCeEEEEeccccccceeEeecCCCCceEeEEEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATT-SFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAI 86 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (154)
..|+.+|+.+++. .....-..........+.++.|+.. -.++.+.++|..+.+....+.... .+ ..+
T Consensus 43 S~v~~vD~~tgkv-----~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~G-----wgl- 110 (243)
T 3mbr_X 43 SSVRKVDLETGRI-----LQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EG-----WAL- 110 (243)
T ss_dssp CEEEEEETTTCCE-----EEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CC-----CEE-
T ss_pred ceEEEEECCCCCE-----EEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-Cc-----eEE-
Confidence 4899999988763 3333222233333233334555444 468999999999988877666543 22 122
Q ss_pred EcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcC---CcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 87 WGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYIS---AIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 87 ~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+++..|+.+..++.|.++|..+.+.+.++.-...+ .....+.+. ++.+++..-.+..|.+.|+
T Consensus 111 -t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 111 -TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp -EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTTEEEEECT
T ss_pred -eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCCeEEEEEC
Confidence 246676766667889999999999888877642211 111234444 4566666656677777775
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=1.1e-05 Score=55.62 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=81.7
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEee-CCCeEEEEeccccccc---------eeEeecCCCC
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFENT---------AMIHHNNQTG 77 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~~---------~~~~~~~~~~ 77 (154)
+.|.|.|.++.+.. .......-.....++.++|||+++++++ .+.+|.++|+.+.+.. ...... +.+
T Consensus 254 ~~V~VID~~~~~~~--~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG 330 (595)
T 1fwx_A 254 NGVKVVDGRKEASS--LFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELG 330 (595)
T ss_dssp TTEEEEECSGGGCC--SSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCC
T ss_pred CcEEEEeCcccCCc--eeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCC
Confidence 35889998873210 1233444455678999999999877665 5889999999865311 111111 111
Q ss_pred ceEeEEEEEEcCCCcEEEEEccCCeEEEecCCC----------ccceeEEeCCCcCCc---ceEEEecCCCccEEEEEc
Q 038702 78 RWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ----------RRSVATLQSPYISAI---PCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~ 143 (154)
.....++|+|+|....+...|+.|.+||+.. .+.+..+..+..... ......+| ++++|++..
T Consensus 331 --~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~N 406 (595)
T 1fwx_A 331 --LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLS 406 (595)
T ss_dssp --SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEE
T ss_pred --CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcC
Confidence 1345778999995556677899999999876 445566655433211 11224567 778887775
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.27 E-value=0.00023 Score=50.55 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=36.2
Q ss_pred CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 100 TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 100 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+|.|+.||+.+++.+-.+..+..... . .+.. .+.+++.++.|+.++.||.+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~-g--~~~t-agglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNG-G--TLST-AGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCC-C--EEEE-TTTEEEEECTTSEEEEEETT
T ss_pred ceeEEEEECCCCCeEeEccCCCCccC-c--cceE-CCCEEEEECCCCcEEEEECC
Confidence 47899999999998877764332111 1 2222 45788889999999999963
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.27 E-value=0.00022 Score=46.53 Aligned_cols=137 Identities=9% Similarity=-0.035 Sum_probs=80.7
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeec-c--------cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEee
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLS-H--------KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHH 72 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~-~--------~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~ 72 (154)
..++.++.|..+|..+++. .-.... . ...+.+. ...++..++.++.++.+..+|..+++..-....
T Consensus 57 ~~~~~~g~v~a~d~~tG~~----~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 57 YAADRAGLVKALNADDGKE----IWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp EEECTTSEEEEEETTTCCE----EEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCeEEEEEccCCce----eeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 4566788899999887653 111111 0 1222221 122456788888999999999998876543332
Q ss_pred cCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCC---cceEEEecCCCccEEEEEcCCCeEE
Q 038702 73 NNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISA---IPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
...... ... . .+..++.++.++.|..+|.++++.+-......... ........ +..++.+..++.+.
T Consensus 132 ~~~~~~-~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 132 AGEALS-RPV----V--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVS 201 (376)
T ss_dssp SSCCCS-CCE----E--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEE
T ss_pred CCceEc-CCE----E--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEE
Confidence 211100 001 1 24577778889999999999998877665432110 00111222 24677778888888
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
.+|.
T Consensus 202 ~~d~ 205 (376)
T 3q7m_A 202 AVLM 205 (376)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8886
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.26 E-value=0.0002 Score=51.32 Aligned_cols=134 Identities=11% Similarity=0.058 Sum_probs=73.8
Q ss_pred CcEEEEEccCC-CCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC-----CeEEEEeccccccc--eeEeecCCCCce
Q 038702 8 GTACIWDLRSM-ATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD-----DTIGIWSGVNFENT--AMIHHNNQTGRW 79 (154)
Q Consensus 8 ~~v~vw~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~~~~~~~~~~~--~~~~~~~~~~~~ 79 (154)
.+|+++|+.++ +. ..... ......+.|+|+++.|+....+ ..|..+++.+.... .++.... ...
T Consensus 201 ~~l~v~dl~~g~~~----l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~--~~~ 272 (751)
T 2xe4_A 201 YTIEFKRISDPSQT----IADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN--PLF 272 (751)
T ss_dssp EEEEEEETTCTTCC----CCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC--TTC
T ss_pred EEEEEEECCCCCEe----CCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC--Cce
Confidence 35888998876 42 11111 1113468899999888777665 35778888765432 2222111 111
Q ss_pred EeEEEEEEcCCCcEEEEEcc---CCeEEEecCCCcc-ce--eEEeCCCcCCcceEEEecCCCccEEEEEcCC----CeEE
Q 038702 80 ISSFRAIWGWDDSCIFIGNM---TRTVEVISPAQRR-SV--ATLQSPYISAIPCRFHAHPHQVGTLAGATGG----GQVY 149 (154)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~---d~~i~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~ 149 (154)
...+.|+|++++|+..+. ...|+++|+.++. .. ..+........ ....|+. .+.+++....+ ..|.
T Consensus 273 --~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~-~s~~~~~-g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 273 --SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR-YDVQMHG-TSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp --EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC-EEEEEET-TTEEEEEECTTTCTTCEEE
T ss_pred --EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce-EEEeeee-CCEEEEEeCCCCCCCcEEE
Confidence 235689999998877653 3468888988753 22 33322222221 3344443 33444554443 3566
Q ss_pred EeeC
Q 038702 150 VWTS 153 (154)
Q Consensus 150 ~wd~ 153 (154)
.+|+
T Consensus 349 ~~d~ 352 (751)
T 2xe4_A 349 IAPR 352 (751)
T ss_dssp EEET
T ss_pred EEcC
Confidence 5554
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.26 E-value=5.5e-05 Score=54.14 Aligned_cols=110 Identities=14% Similarity=0.043 Sum_probs=69.0
Q ss_pred CeEEEEEc-CCCCEEEEeeC-C----CeEEEEecccc-cccee-EeecCCCCceEeEEEEEEcCCCcEEEEEccC-----
Q 038702 34 AVHSAYFS-PSGSSLATTSF-D----DTIGIWSGVNF-ENTAM-IHHNNQTGRWISSFRAIWGWDDSCIFIGNMT----- 100 (154)
Q Consensus 34 ~v~~~~~~-~~~~~l~~~~~-d----~~v~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----- 100 (154)
.+...+|| |+|++++.+.. + ..|+++|+.++ +.... +... ...+.|+||++.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~--------~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT--------NGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE--------CSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc--------eeeEEEecCCCEEEEEEECCCCCC
Confidence 57789999 99998875433 2 35999999887 53211 1110 1145799999888777665
Q ss_pred CeEEEecCCCccce--eEEeCCCcCCcceEEEecCCCccEEEEEc---CCCeEEEeeC
Q 038702 101 RTVEVISPAQRRSV--ATLQSPYISAIPCRFHAHPHQVGTLAGAT---GGGQVYVWTS 153 (154)
Q Consensus 101 ~~i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~~wd~ 153 (154)
..|..+++.+++.. ..+...... ....+.|+| ++++|+..+ ....|+++|+
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPL-FSAFMYKAA-DTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTT-CEEEEEECT-TSSEEEEEEECSSCEEEEEEES
T ss_pred CEEEEEECCCCchhcEEEEecCCCc-eEEEEEECC-CCCEEEEEecCCCCceEEEEEC
Confidence 35788888776432 233322222 235678999 777766544 2345777775
No 244
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=0.00013 Score=47.18 Aligned_cols=120 Identities=8% Similarity=-0.096 Sum_probs=73.8
Q ss_pred cccCCeEEEEEcCCCCEEEEeeC-----CCeEEEEeccccccceeEeecC---CCCceEeEEEEEEcCCC-cEEEEEc--
Q 038702 30 SHKRAVHSAYFSPSGSSLATTSF-----DDTIGIWSGVNFENTAMIHHNN---QTGRWISSFRAIWGWDD-SCIFIGN-- 98 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~l~~~~-- 98 (154)
.+...+..++++++++++++-.. +..|.+||+.+++....+.... ....... .+++++++ ..+++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~--~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN--DLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC--EEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc--eEEEecCCCEEEEEcCcc
Confidence 35578999999999887666544 5789999998776544333211 1111112 45678754 4445555
Q ss_pred -cCCeEEEecCCCccceeEEeCCCc---------------------------CCcceEEEecCCCccEEEEEcCCC-eEE
Q 038702 99 -MTRTVEVISPAQRRSVATLQSPYI---------------------------SAIPCRFHAHPHQVGTLAGATGGG-QVY 149 (154)
Q Consensus 99 -~d~~i~i~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~~~~d~-~i~ 149 (154)
.++.|.+||+.+++....+.++.. ......++++| +++.|..+..++ .+.
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMY 220 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEE
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEE
Confidence 678999999988776555432100 01235688999 677666665544 554
Q ss_pred Eee
Q 038702 150 VWT 152 (154)
Q Consensus 150 ~wd 152 (154)
.++
T Consensus 221 ~~~ 223 (343)
T 2qe8_A 221 RIK 223 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00042 Score=46.46 Aligned_cols=132 Identities=11% Similarity=-0.032 Sum_probs=76.7
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC-C----eEEEEeccccccc--eeEeecCCCCceE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD-D----TIGIWSGVNFENT--AMIHHNNQTGRWI 80 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~v~~~~~~~~~~~--~~~~~~~~~~~~~ 80 (154)
+.|+.+|+.... ...+.........++|+++++.|+.+... + .+...+.. .... ..+... ..
T Consensus 159 ~~I~~id~~~~~-----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~~-~~---- 227 (430)
T 3tc9_A 159 HPTRLIDFEKEY-----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTKG-QN---- 227 (430)
T ss_dssp EEEEEEETTTTE-----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEEC-SS----
T ss_pred CcEEEEECCCCE-----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-CceeeeeeeccC-CC----
Confidence 556667765433 23333445568899999999966665542 1 23333332 2221 111111 11
Q ss_pred eEEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeC
Q 038702 81 SSFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTS 153 (154)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~ 153 (154)
...++++| ++.++++-..++.|..++...+....... ......+..++++| +++ ++++-...+.|..++.
T Consensus 228 -p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~-~~~~~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 228 -CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT-IQDSGWEFHIQFHP-SGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp -CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE-CSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred -ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE-cCCCCcceeEEEcC-CCCEEEEEECCCCEEEEEeC
Confidence 11356788 67777776677899999987665422222 11223346799999 666 5666667888888764
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.17 E-value=5.4e-05 Score=49.66 Aligned_cols=91 Identities=13% Similarity=-0.079 Sum_probs=66.6
Q ss_pred eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc----------cCCeEEEecCCCccceeEEeCCCc--
Q 038702 55 TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN----------MTRTVEVISPAQRRSVATLQSPYI-- 122 (154)
Q Consensus 55 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~-- 122 (154)
+|.+.|..+.+....+..... . .+.++|++++++.+. .++.|.+||+.+++.+.++..+..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~------P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL------S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT------C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEEEeCCCC------C-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 788999999888766654432 1 457899999888886 468899999999999999864311
Q ss_pred ---CCcceEEEecCCCccEEEEEcC--CCeEEE--eeC
Q 038702 123 ---SAIPCRFHAHPHQVGTLAGATG--GGQVYV--WTS 153 (154)
Q Consensus 123 ---~~~~~~~~~~~~~~~~l~~~~~--d~~i~~--wd~ 153 (154)
...+..++++| +++++..+.. +..+.+ +|+
T Consensus 120 ~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 120 FSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp CCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTT
T ss_pred cccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEch
Confidence 11234688999 7777777664 457888 875
No 247
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.13 E-value=0.00046 Score=46.30 Aligned_cols=134 Identities=8% Similarity=-0.020 Sum_probs=73.2
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC---Ce-EEEEeccccccc-eeEeecCCCCceEeE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD---DT-IGIWSGVNFENT-AMIHHNNQTGRWISS 82 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~-v~~~~~~~~~~~-~~~~~~~~~~~~~~~ 82 (154)
+.|+.++..++. ...+.........++++++++++++-... .. +...+....... ....... ..
T Consensus 162 ~~I~~id~~~g~-----v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~------~P 230 (433)
T 4hw6_A 162 DAFRHVDFVNQY-----VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNAR------GA 230 (433)
T ss_dssp SCEEEEETTTTE-----EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECS------SB
T ss_pred CCEEEEECCCCE-----EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccC------CC
Confidence 455556654433 22333444568899999999944443321 12 333332221110 1111111 11
Q ss_pred EEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeC
Q 038702 83 FRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~ 153 (154)
..++++| ++.++++-..++.|+.++..++.....+...........++++| +++ ++++-...+.|..++.
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEETTTTEEEEEEB
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEeCCCCEEEEEeC
Confidence 1346788 66666666677889999988776533332222222334689999 666 6666667788988764
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.08 E-value=0.00056 Score=43.79 Aligned_cols=113 Identities=10% Similarity=-0.062 Sum_probs=69.8
Q ss_pred CCeEEEEEcCCCCEEEEe-eCCCeEEEEecccccc--ceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc----------
Q 038702 33 RAVHSAYFSPSGSSLATT-SFDDTIGIWSGVNFEN--TAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM---------- 99 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~-~~d~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------- 99 (154)
.....++++|+++.|+.+ ...+.|..+++..... ...+.. ..+ .-.++..++|.++++...
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g----P~gi~~d~~G~l~va~~~~~~~~~~~~~ 258 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN----PGNIKRNADGHFWVSSSEELDGNMHGRV 258 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS----EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC----CCCeEECCCCCEEEEecCcccccccCCC
Confidence 345678999999866555 5678899999875321 112211 111 224578899987766544
Q ss_pred CCeEEEecCCCccceeEEeCCCc--CCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 100 TRTVEVISPAQRRSVATLQSPYI--SAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 100 d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.+.|..+|.. ++.+..+..... ......+++. ++.++++....+.|..++++
T Consensus 259 ~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 259 DPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEEC-
T ss_pred ccEEEEECCC-CCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEecc
Confidence 4678888874 676666654321 1122344443 56777777788899988863
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.03 E-value=0.0006 Score=42.40 Aligned_cols=138 Identities=9% Similarity=-0.002 Sum_probs=80.0
Q ss_pred cCCCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
..++.|..+++.... ..... ........+++++++..++ +-...+.|.++++............. . ..
T Consensus 55 ~~~~~I~~~~~~g~~-----~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~--~---~P 124 (267)
T 1npe_A 55 ISEPSIGRASLHGGE-----PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL--V---NP 124 (267)
T ss_dssp TTTTEEEEEESSSCC-----CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--S---SE
T ss_pred CCCCEEEEEecCCCC-----cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC--C---Cc
Confidence 345667777765432 22222 2224678999999755544 44557889999987543322221110 1 22
Q ss_pred EEEEEcCCCcEEEEEcc---CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 83 FRAIWGWDDSCIFIGNM---TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..++++|++..|..+.. .+.|..+++.. +....+.. .....+..++++|..+.++++-...+.|..+|++
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEEC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 35678986555544443 36787777653 33333321 1223457889998445566777778899998864
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.98 E-value=0.00067 Score=47.27 Aligned_cols=83 Identities=6% Similarity=-0.068 Sum_probs=49.7
Q ss_pred CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEec
Q 038702 53 DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAH 132 (154)
Q Consensus 53 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (154)
+|.+.-||+.+++..-......... ...+ ...+.+++.++.|+.++.||.++++.+-.++.... ....-+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~--~g~~----~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g-~~a~P~~y~ 537 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLW--AGVL----ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG-IVSPPITWE 537 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCC--SCCE----EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCc--ccce----EeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC-cccCceEEE
Confidence 5778888888877654333221110 0111 11466788899999999999999999988875432 222234444
Q ss_pred CCCccEEEEE
Q 038702 133 PHQVGTLAGA 142 (154)
Q Consensus 133 ~~~~~~l~~~ 142 (154)
.....++++.
T Consensus 538 ~~G~qYv~~~ 547 (582)
T 1flg_A 538 QDGEQYLGVT 547 (582)
T ss_dssp ETTEEEEEEE
T ss_pred ECCEEEEEEE
Confidence 4233455443
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.96 E-value=0.00096 Score=46.39 Aligned_cols=62 Identities=3% Similarity=-0.026 Sum_probs=41.4
Q ss_pred CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC
Q 038702 53 DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP 120 (154)
Q Consensus 53 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 120 (154)
++.+..+|..+++..-......... ... ....+..++.++.|+.|+.+|.++++.+..+...
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~--~~~----~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAW--GGT----LYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCC--SBC----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCeEEEEECCCCCEEEEecCCCCcc--cee----EEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 4778888888777654443322110 011 1124567777899999999999999999888744
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.94 E-value=0.00041 Score=44.23 Aligned_cols=132 Identities=16% Similarity=0.089 Sum_probs=73.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
..++.++.+..+|.. ++. ..........+.++...+++. +..++.++.+..+|.. ++.......... .+.
T Consensus 111 ~v~t~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~---~~~ 180 (330)
T 3hxj_A 111 YVTSMDGHLYAINTD-GTE----KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA---ITS 180 (330)
T ss_dssp EEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC---CCS
T ss_pred EEEecCCEEEEEcCC-CCE----EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC---cee
Confidence 356677888888876 432 222223344556667776776 5556778889999987 443332222111 111
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+...+++.+++. + +.+..+| .+++.+......... ...+...+ ++ .+..++.++.+..+|.
T Consensus 181 --~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~--~~~~~~~~-~g-~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 181 --AASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWT--VTRPAISE-DG-TIYVTSLDGHLYAINP 242 (330)
T ss_dssp --CCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCC--CSCCEECT-TS-CEEEEETTTEEEEECT
T ss_pred --eeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcc--eeceEECC-CC-eEEEEcCCCeEEEECC
Confidence 2234556665544 4 7788888 666666555432222 23455555 43 4445566677776664
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.93 E-value=0.00035 Score=49.51 Aligned_cols=146 Identities=9% Similarity=-0.017 Sum_probs=84.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecc-c----CCeEEEEEcCCCCEEEEeeC------CCeEEEEeccccccceeE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSH-K----RAVHSAYFSPSGSSLATTSF------DDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~~~------d~~v~~~~~~~~~~~~~~ 70 (154)
+.++.|+.|..+|..+++. .-+...+ . ..+.+--.. .+..++.++. ++.|..+|.++++..-.+
T Consensus 132 ~v~~~dg~l~alD~~tG~~----~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 132 YVGAWDGRLIALDAATGKE----VWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEECTTSEEEEEETTTCCE----EEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEcCCCEEEEEECCCCCE----EeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 4567889999999988764 2222221 1 111110001 2345555543 689999999988776444
Q ss_pred eecCCCC--------------------ce-------EeEEEEEEcCCCcEEEEEccCC-------------------eEE
Q 038702 71 HHNNQTG--------------------RW-------ISSFRAIWGWDDSCIFIGNMTR-------------------TVE 104 (154)
Q Consensus 71 ~~~~~~~--------------------~~-------~~~~~~~~~~~~~~l~~~~~d~-------------------~i~ 104 (154)
....... .. .....++++|++..++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 3211110 00 0001346788888888777654 599
Q ss_pred EecCCCccceeEEeCCCc-------CCcceEEEecCCCc---cEEEEEcCCCeEEEeeC
Q 038702 105 VISPAQRRSVATLQSPYI-------SAIPCRFHAHPHQV---GTLAGATGGGQVYVWTS 153 (154)
Q Consensus 105 i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---~~l~~~~~d~~i~~wd~ 153 (154)
.+|..+++.+-.+..... ......+.... ++ ..++.++.+|.++++|.
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~ 344 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDR 344 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEET
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEEC
Confidence 999999998877664211 11111122222 34 67888999999999986
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.85 E-value=0.0017 Score=41.51 Aligned_cols=116 Identities=7% Similarity=0.007 Sum_probs=66.3
Q ss_pred CCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcC-CCcEEEEEcc-----------
Q 038702 33 RAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGW-DDSCIFIGNM----------- 99 (154)
Q Consensus 33 ~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~----------- 99 (154)
..+..+++.+ ++++++ +...+.+..+|..+............ ......-.+++.+ +|.++++-..
T Consensus 80 ~~p~gi~~~~~~g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYI-VDCYYHLSVVGSEGGHATQLATSVDG-VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTTEEEE-EETTTEEEEECTTCEECEEEESEETT-EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCCcEEE-EECCCCEEEEeCCCCEEEEecccCCC-CcccccceEEEecCCCEEEEECCccccccccccee
Confidence 3578999998 665444 44445588888765443222211110 0001123567889 8887766432
Q ss_pred ------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCcc-EEEEEcCCCeEEEeeCC
Q 038702 100 ------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVG-TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 100 ------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~~ 154 (154)
++.|..+|..+++....... ...+..++++| +++ ++++-...+.|..|+++
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECT-TSSEEEEEEGGGTEEEEEESS
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC---CccCcceEECC-CCCEEEEEeCCCCeEEEEECC
Confidence 36788888766653322221 12235688998 666 45555677889888863
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.79 E-value=0.001 Score=42.33 Aligned_cols=132 Identities=10% Similarity=0.043 Sum_probs=72.4
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEe
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWIS 81 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (154)
..++.++.+..+|.. ++. ..........+.++...+++..++.. +.+..+| .+++......... ..+.
T Consensus 151 ~vgt~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~---~~~~ 218 (330)
T 3hxj_A 151 YVGSNDNYLYAINPD-GTE----KWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY---WTVT 218 (330)
T ss_dssp EEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS---CCCS
T ss_pred EEEcCCCEEEEECCC-CCE----eEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC---ccee
Confidence 346667788888876 432 22222334456677777777755554 7788888 5444332222111 1111
Q ss_pred EEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 82 SFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+...+++. +..++.++.+..++. +++.+..+....... ..+...+ + ..|..++.+|.|..+|.
T Consensus 219 --~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~--~~~~~~~-~-g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 219 --RPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIE--SSPVIGN-T-DTIYFGSYDGHLYAINP 282 (330)
T ss_dssp --CCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCC--SCCEECT-T-SCEEEECTTCEEEEECT
T ss_pred --ceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCcc--ccceEcC-C-CeEEEecCCCCEEEECC
Confidence 234466665 445566777888874 555555554322211 2234443 3 45666777888888774
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.77 E-value=0.0011 Score=46.70 Aligned_cols=113 Identities=8% Similarity=-0.007 Sum_probs=66.9
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc-CCeE
Q 038702 37 SAYFSP-SGSSLATTSFDD-----------TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM-TRTV 103 (154)
Q Consensus 37 ~~~~~~-~~~~l~~~~~d~-----------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i 103 (154)
..++.+ +++.++.|+.+. .+.+||..+.+-............ .+...++.+++++++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~--~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM--FCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC--SSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC--ccccccCCCCCCEEEeCCCCCCce
Confidence 566777 788888876542 588899887654332221111111 1113456788999999884 4589
Q ss_pred EEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc-CC-----CeEEEeeC
Q 038702 104 EVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT-GG-----GQVYVWTS 153 (154)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d-----~~i~~wd~ 153 (154)
.+||..+.+-...-..+. .......+..+ ++.+++.|+ .+ ..+.+||+
T Consensus 268 ~~yd~~t~~W~~~~~~~~-~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQV-ARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEEEGGGTEEEECCCCSS-CCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEET
T ss_pred EEecCcCCceeECCCCCc-cccccceEEec-CCeEEEEeCcccCCcccccceEeCC
Confidence 999988654322211111 11113445555 678888888 44 46888886
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.75 E-value=0.0022 Score=39.84 Aligned_cols=140 Identities=15% Similarity=0.039 Sum_probs=78.6
Q ss_pred CcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCceEeEEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRA 85 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (154)
+.|+.+++.............. .....+..++|++++..|+ +-..++.|..+++............. . ....+
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~---~p~~i 84 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--G---SPEGI 84 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--C---CEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC--C---CccEE
Confidence 4688888865432110011112 1234578999999665555 44557899999987654433221110 1 22356
Q ss_pred EEcCCCc-EEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC--CCeEEEeeCC
Q 038702 86 IWGWDDS-CIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG--GGQVYVWTSD 154 (154)
Q Consensus 86 ~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~~wd~~ 154 (154)
++++++. .+++-...+.|.++++.... ...+.. .....+..++++|..+.++++... .+.|..++++
T Consensus 85 a~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~-~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC-SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred EEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEE-CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 7888654 44555567789999886433 223321 122334678999844555555443 4678777653
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.72 E-value=0.0024 Score=45.28 Aligned_cols=62 Identities=8% Similarity=0.114 Sum_probs=43.8
Q ss_pred CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC
Q 038702 53 DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP 120 (154)
Q Consensus 53 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 120 (154)
+|.|..||+.+++..-......... .. .....+.+++.++.|+.++.||.++++.+..+...
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~--~~----~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWN--GG----TLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCC--CC----EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEEEEccCCCCCc--Cc----eeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 4789999998887664443322110 01 12335778888999999999999999999888754
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.62 E-value=0.0074 Score=42.32 Aligned_cols=62 Identities=6% Similarity=0.013 Sum_probs=39.9
Q ss_pred CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCC
Q 038702 53 DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSP 120 (154)
Q Consensus 53 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 120 (154)
.|.+.-||+.+++..-......... ... ....+.+++.++.|+.++.||.++++.+-.++..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~--~g~----~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVW--GGT----MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCC--SBC----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCeEEEEECCCCCEEeEecCCCCcc--Ccc----eEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 4667777777766544333221100 000 1124667778999999999999999999888743
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.60 E-value=0.0048 Score=39.86 Aligned_cols=118 Identities=3% Similarity=-0.053 Sum_probs=74.8
Q ss_pred CeEEEEEcCCCCEEEEee-CCCeEEEEeccccccceeEeecCC---CCceEeEEEEEE---cCCCcEEEEEcc-------
Q 038702 34 AVHSAYFSPSGSSLATTS-FDDTIGIWSGVNFENTAMIHHNNQ---TGRWISSFRAIW---GWDDSCIFIGNM------- 99 (154)
Q Consensus 34 ~v~~~~~~~~~~~l~~~~-~d~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~l~~~~~------- 99 (154)
.--+++|++....|..++ ..++|..|+......... ..... .........+.| .|+++++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 345789988555555555 799999999875433322 11110 112234457788 688877775432
Q ss_pred ------CCeEEEecCC---CccceeEEeCC--C---------cCCcceEEEecCCCccEEEEEcCC-CeEEEeeC
Q 038702 100 ------TRTVEVISPA---QRRSVATLQSP--Y---------ISAIPCRFHAHPHQVGTLAGATGG-GQVYVWTS 153 (154)
Q Consensus 100 ------d~~i~i~~~~---~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~l~~~~~d-~~i~~wd~ 153 (154)
+..|..||+. +++.+....-. . ....+..++..+ +++..++++.. +.|...+.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECT
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeC
Confidence 5779999999 78776555421 0 112357889998 78888888877 76665554
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.56 E-value=0.0066 Score=40.09 Aligned_cols=114 Identities=7% Similarity=-0.141 Sum_probs=66.0
Q ss_pred CeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc-cC-CeEEEecCCC
Q 038702 34 AVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN-MT-RTVEVISPAQ 110 (154)
Q Consensus 34 ~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d-~~i~i~~~~~ 110 (154)
....+++.+.+. ++++-...+.|.+.++.............. ....+++.|.+..|+... .. +.|..+++..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~-----~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----KPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCS-----CEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCC-----CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 446788887544 445555577888888765443333221111 223556787665554443 33 6777777654
Q ss_pred ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 111 RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.. ...+.. .....+..++++|..+.++++-+..+.|..+|++
T Consensus 235 ~~-~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 235 SG-RRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp CS-CEEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CC-cEEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 33 233321 2223356789987555666666777888888764
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.52 E-value=0.0067 Score=39.23 Aligned_cols=143 Identities=10% Similarity=0.075 Sum_probs=86.5
Q ss_pred cCCCcEEEEEccCCCCCCCCCcee-ecc-------cCCeEEEEE---cCCCCEEEEee-------------CCCeEEEEe
Q 038702 5 STDGTACIWDLRSMATDKPEPTKV-LSH-------KRAVHSAYF---SPSGSSLATTS-------------FDDTIGIWS 60 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~l~~~~-------------~d~~v~~~~ 60 (154)
-..++|..|+...+.. ..+ ... ...+..|.| .|+++++++.. .+..+..+|
T Consensus 32 l~~g~V~~~~~~~~~~-----~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~D 106 (334)
T 2p9w_A 32 LYKGRIEVYNPKTQSH-----FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFN 106 (334)
T ss_dssp TTTTEEEEECTTTCCE-----EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEE
T ss_pred ccCCEEEEEcCCCCeE-----EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEc
Confidence 3678888898864331 111 111 113579999 68887777543 267799999
Q ss_pred cc---ccccceeEeecC-CCC-------ceEeEEEEEEcCCCcEEEEEccC-CeEEEecCCCccceeEEeCCC----cCC
Q 038702 61 GV---NFENTAMIHHNN-QTG-------RWISSFRAIWGWDDSCIFIGNMT-RTVEVISPAQRRSVATLQSPY----ISA 124 (154)
Q Consensus 61 ~~---~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~l~~~~~d-~~i~i~~~~~~~~~~~~~~~~----~~~ 124 (154)
+. +.+......-.. ..+ .....-.++..++|+..++++.. +.|...+.... .+..+.... ...
T Consensus 107 l~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~ 185 (334)
T 2p9w_A 107 LPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRP 185 (334)
T ss_dssp SSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCC
T ss_pred CCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCccccc
Confidence 98 665543332110 000 11223467889999999988888 88777776533 233222111 111
Q ss_pred cceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 125 IPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 125 ~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
-...++++| ++..|+.....|.+..+|+.
T Consensus 186 G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 186 GYSGITFDP-HSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp SCSEEEEET-TTTEEEEESSSSSEEEEECS
T ss_pred CcceEEEeC-CCCEEEEEcCCCeEEEEcCC
Confidence 135789999 67777766669999988863
No 263
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.51 E-value=0.0073 Score=39.39 Aligned_cols=139 Identities=7% Similarity=0.020 Sum_probs=77.0
Q ss_pred CCcEEEEEccCCCCCCCCCceeec-------cc-CCeEEEEE--cCC-CC-EEEEeeCCCeEEEEeccccc---c-ceeE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLS-------HK-RAVHSAYF--SPS-GS-SLATTSFDDTIGIWSGVNFE---N-TAMI 70 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~-------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~~~~~~~~~---~-~~~~ 70 (154)
+++|.+|++..... .....+ .. ..+..+++ +|. +. +++....+|.+..|++.... . ....
T Consensus 98 ~n~l~vf~iDp~~~----~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lV 173 (355)
T 3amr_A 98 KNTIEIYAIDGKNG----TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKV 173 (355)
T ss_dssp CCEEEEEEECTTTC----CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCC----ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEE
Confidence 57899998843222 121111 11 55677787 774 43 67778889999999985421 1 1111
Q ss_pred eecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC-----CccceeEEeCCCcCCcceEEEe--cCCCcc-E-EEE
Q 038702 71 HHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA-----QRRSVATLQSPYISAIPCRFHA--HPHQVG-T-LAG 141 (154)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-l~~ 141 (154)
......+ ..-.|...+....|+.+-++..|..++.+ +++.+..+...+...-.-.++. .+ ++. + |++
T Consensus 174 R~f~lgs---q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~-~g~gyLivS 249 (355)
T 3amr_A 174 RAFKMNS---QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA-DGKGYLMAS 249 (355)
T ss_dssp EEEECSS---CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG-GGCEEEEEE
T ss_pred EEecCCC---CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC-CCCEEEEEE
Confidence 1111111 12245667788889999888777777755 2334444322211111234444 33 333 4 455
Q ss_pred EcCCCeEEEeeC
Q 038702 142 ATGGGQVYVWTS 153 (154)
Q Consensus 142 ~~~d~~i~~wd~ 153 (154)
+-.+.+..+||.
T Consensus 250 sQG~~s~~Vydr 261 (355)
T 3amr_A 250 SQGNSSYAIYDR 261 (355)
T ss_dssp EGGGTEEEEEES
T ss_pred cCCCCEEEEEEC
Confidence 546779999986
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.49 E-value=0.003 Score=44.76 Aligned_cols=148 Identities=9% Similarity=-0.016 Sum_probs=81.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceeec-ccCCeEEEEEcC--CCCEEEEeeC------CCeEEEEeccccccceeEee
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVLS-HKRAVHSAYFSP--SGSSLATTSF------DDTIGIWSGVNFENTAMIHH 72 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~------d~~v~~~~~~~~~~~~~~~~ 72 (154)
+.++.|+.|..+|..+++. .-+... .......+..+| .+..++.+.. ++.|..+|.++++..-.+..
T Consensus 121 ~v~~~dg~l~alD~~tG~~----~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 121 YVGTLDGRLIALDAKTGKA----IWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEECTTSEEEEEETTTCCE----EEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEcCCCEEEEEECCCCCE----eeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 4567789999999988764 222211 100000011111 1334555443 58999999998877644432
Q ss_pred c--CCCCc------------------------eEeEEEEEEcCCCcEEEEEccCC-------------------eEEEec
Q 038702 73 N--NQTGR------------------------WISSFRAIWGWDDSCIFIGNMTR-------------------TVEVIS 107 (154)
Q Consensus 73 ~--~~~~~------------------------~~~~~~~~~~~~~~~l~~~~~d~-------------------~i~i~~ 107 (154)
. .+... .......++.|+...++.+..++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 00000 00000245677778888877665 399999
Q ss_pred CCCccceeEEeCCCc---------CCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 108 PAQRRSVATLQSPYI---------SAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 108 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
..+++.+-.++..+. ......+.........++.++.+|.++++|.
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~ 331 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDR 331 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEEC
Confidence 999998877764211 1111122222101126888899999999985
No 265
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.011 Score=40.49 Aligned_cols=134 Identities=12% Similarity=-0.013 Sum_probs=74.7
Q ss_pred CcEEEEEccCCCCCCCCCceeec----ccCCeEEEEE-------cCCCCEEEEeeCCC-------eEEEEeccc-cccc-
Q 038702 8 GTACIWDLRSMATDKPEPTKVLS----HKRAVHSAYF-------SPSGSSLATTSFDD-------TIGIWSGVN-FENT- 67 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~----~~~~v~~~~~-------~~~~~~l~~~~~d~-------~v~~~~~~~-~~~~- 67 (154)
+.|++.|+..+. ...+.. .......++| +++++.|+.+...+ .+.+.+... +...
T Consensus 162 ~~i~~ID~~~~~-----v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~ 236 (496)
T 3kya_A 162 KAIQLIDLKNRM-----LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDD 236 (496)
T ss_dssp EEEEEEETTTTE-----EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCST
T ss_pred CeEEEEECCCCE-----EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceee
Confidence 456666666543 222222 1235889999 99999666665543 255555333 1111
Q ss_pred ----eeEeecCCCCceEeEEEEEEcCC-CcEEEEEccCCeEEEecCC-------Cccc-----------eeEEeCCCcCC
Q 038702 68 ----AMIHHNNQTGRWISSFRAIWGWD-DSCIFIGNMTRTVEVISPA-------QRRS-----------VATLQSPYISA 124 (154)
Q Consensus 68 ----~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~-------~~~~-----------~~~~~~~~~~~ 124 (154)
..+... . ....++.+|+ +.++++-..++.|..+|+. ++.. ...+.......
T Consensus 237 ~~~~~~v~~~-~-----~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 237 RSDIQLIAAY-K-----QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp TSCEEEEEEE-S-----CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred cccceeeccC-C-----CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 112111 1 1123466884 5556666678889999987 4443 12222112223
Q ss_pred cceEEEecCCCcc-EEEEEcCCCeEEEeeC
Q 038702 125 IPCRFHAHPHQVG-TLAGATGGGQVYVWTS 153 (154)
Q Consensus 125 ~~~~~~~~~~~~~-~l~~~~~d~~i~~wd~ 153 (154)
....++++| +++ ++++-.....|+.++.
T Consensus 311 ~p~~ia~~p-~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 311 WEFQIFIHP-TGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp CCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred CceEEEEcC-CCCEEEEEeCCCCEEEEEec
Confidence 346799999 666 4566667788888653
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.47 E-value=0.009 Score=39.46 Aligned_cols=136 Identities=12% Similarity=-0.037 Sum_probs=77.7
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRA 85 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (154)
...|+..++.... ...+.........++|++.+..| .+-...+.|..+++............... ...+
T Consensus 95 ~~~I~~i~~~~~~-----~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~-----p~gl 164 (386)
T 3v65_B 95 RIDIRQVLPHRSE-----YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES-----PGGL 164 (386)
T ss_dssp BSCEEEECTTSCC-----CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC-----CCCE
T ss_pred CccceeeccCCCc-----EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC-----ccEE
Confidence 3456666665433 23333444567899999855544 45456788999988765543333221111 1134
Q ss_pred EEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-CeEEEeeCC
Q 038702 86 IWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-GQVYVWTSD 154 (154)
Q Consensus 86 ~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~~i~~wd~~ 154 (154)
++.+. +.++++-...+.|.+.++..... ..+.. .....+..++++|..+.++.+-... +.|...+++
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~-~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSC-EEEEC-SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeec-CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 56664 45555656677888888764432 22221 2223346788888555566665555 778777653
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.29 E-value=0.014 Score=37.93 Aligned_cols=115 Identities=7% Similarity=-0.155 Sum_probs=67.8
Q ss_pred CCeEEEEEcCCC-CEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEE-ccC-CeEEEecCC
Q 038702 33 RAVHSAYFSPSG-SSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIG-NMT-RTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d-~~i~i~~~~ 109 (154)
.....+++.+.+ +++++-...+.|.+.++.............. ....+++.|.+..|+.. ... +.|..+++.
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~-----~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----KPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS-----CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC-----CcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 345688998754 4445555678899998876543333221111 12356778865544443 334 678777765
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.. ....+. ......+..++++|..+.++++-...+.|..+|++
T Consensus 191 G~-~~~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 191 GS-GRRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SC-SCEESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CC-CcEEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 33 222322 12233457889998566666776777888888764
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.016 Score=38.94 Aligned_cols=111 Identities=11% Similarity=0.054 Sum_probs=65.5
Q ss_pred CeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-C----eEEEec
Q 038702 34 AVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-R----TVEVIS 107 (154)
Q Consensus 34 ~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~----~i~i~~ 107 (154)
....++++| ++..|+.+...+.|+.+|+............ .....+++++++++|+.+... + .+..++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~------~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGL------SKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCC------SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCC------CCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 456889998 4555666655588888998775544433211 123467899999966555432 1 233333
Q ss_pred CCCccce--eEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 108 PAQRRSV--ATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 108 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
. .+... ..+.. ...+..++++|.++.++++-..++.|..+|.+
T Consensus 212 ~-~g~~~~~~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 212 R-ESGFKVITELTK---GQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp G-GGTSCSEEEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred C-CCceeeeeeecc---CCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 2 23222 22221 12234677888566777777778889888763
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.27 E-value=0.013 Score=37.16 Aligned_cols=112 Identities=10% Similarity=0.033 Sum_probs=66.3
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc-CC-eEEEecCCC
Q 038702 33 RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM-TR-TVEVISPAQ 110 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~-~i~i~~~~~ 110 (154)
.....++|+++++++++-..++.|..+|..... ....... + ....+++.++++++++... ++ .|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~---~---~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHATVE---G---KVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEECS---S---EEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEeCC---C---CceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 567899999999877777788999999876532 2222111 1 2345678999986665433 22 466677777
Q ss_pred ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 111 RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
++........ .......++..+ .+..+++-..++.|+.+|.
T Consensus 105 g~~~~~~~~~-~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 105 GTVETLLTLP-DAIFLNGITPLS-DTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp SCEEEEEECT-TCSCEEEEEESS-SSEEEEEETTTTEEEEEET
T ss_pred CeEEEEEeCC-CccccCcccccC-CCcEEEEECCCCeEEEEeC
Confidence 6643322211 111222333334 4445555556788888775
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.26 E-value=0.015 Score=37.30 Aligned_cols=137 Identities=10% Similarity=-0.005 Sum_probs=77.5
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEE-EEeeCCCeEEEEeccc----cccceeEeecCCCCceE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVN----FENTAMIHHNNQTGRWI 80 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~----~~~~~~~~~~~~~~~~~ 80 (154)
....|+..|+.... ...+.........++|++.+..+ .+-..++.|..+++.. .............
T Consensus 8 ~~~~I~~i~~~~~~-----~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~---- 78 (316)
T 1ijq_A 8 NRHEVRKMTLDRSE-----YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA---- 78 (316)
T ss_dssp CBSSEEEEETTSCC-----CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC----
T ss_pred CCCeEEEEECCCcc-----eEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC----
Confidence 34678888987654 33344445667899999866544 4545578999999876 2222222111111
Q ss_pred eEEEEEEcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-CeEEEeeCC
Q 038702 81 SSFRAIWGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-GQVYVWTSD 154 (154)
Q Consensus 81 ~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~~i~~wd~~ 154 (154)
...+++.+. +.++++-...+.|.++++........+.. ....+..++.+|..+.++++.... +.|...+++
T Consensus 79 -p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 79 -PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp -CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred -cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC--CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 113456654 44555556778899998864432222221 122346788888555555555443 677777653
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.19 E-value=0.019 Score=37.33 Aligned_cols=135 Identities=12% Similarity=-0.033 Sum_probs=77.1
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAI 86 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (154)
..|+..++.... ...+......+..++|++....|+ +-...+.|..+++............... ...++
T Consensus 53 ~~I~~i~~~g~~-----~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~-----p~gla 122 (349)
T 3v64_C 53 IDIRQVLPHRSE-----YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES-----PGGLA 122 (349)
T ss_dssp SCEEEECTTSCC-----EEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC-----CCEEE
T ss_pred cceEEEeCCCCe-----eEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC-----ccEEE
Confidence 345555554322 222333344578999998655554 4456788988988766544333221111 11345
Q ss_pred EcCC-CcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-CeEEEeeCC
Q 038702 87 WGWD-DSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-GQVYVWTSD 154 (154)
Q Consensus 87 ~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~~i~~wd~~ 154 (154)
+.+. +.++.+-...+.|.+.++..... ..+.. .....+..++++|..+.++.+-... +.|...+++
T Consensus 123 vd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~-~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 123 VDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC-TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEe-CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 6664 45556666677899988764432 23321 1223346788888566666666555 788877653
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.04 E-value=0.026 Score=36.18 Aligned_cols=115 Identities=7% Similarity=-0.083 Sum_probs=68.1
Q ss_pred CCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC--CeEEEecCC
Q 038702 33 RAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT--RTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~i~~~~ 109 (154)
.....+++++.+. ..++-...+.|.+.++.............. ..-.++..|.+..++..... +.|...++.
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-----~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC-----CcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 3457889987554 445556678899999875443333321111 22355678866655444432 577777764
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+.....+.. .....+..++++|..+.++++-...+.|..+|++
T Consensus 152 -G~~~~~~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 152 -GVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp -SCCEEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -CCCeEEEEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 333333321 1223457889998555666666677889888864
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.98 E-value=0.036 Score=36.84 Aligned_cols=135 Identities=10% Similarity=-0.005 Sum_probs=74.7
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEe-eCCCeEEEEeccccc----cceeEeecCCCCceEe
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATT-SFDDTIGIWSGVNFE----NTAMIHHNNQTGRWIS 81 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (154)
...|+..++.... ...+......+..++|++....|+.+ ...+.|..+++.... .......... .
T Consensus 91 ~~~I~~i~l~~~~-----~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-----~ 160 (400)
T 3p5b_L 91 RHEVRKMTLDRSE-----YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-----A 160 (400)
T ss_dssp TTEEEEECTTSCS-----CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS-----C
T ss_pred cceeEEEccCCcc-----eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC-----C
Confidence 3456666665433 33344556678899999865555444 457888888886532 2222211111 1
Q ss_pred EEEEEEcC-CCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcC-CCeEEEeeC
Q 038702 82 SFRAIWGW-DDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATG-GGQVYVWTS 153 (154)
Q Consensus 82 ~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~~wd~ 153 (154)
...+++.+ .+.++.+-...+.|.+.++........+.. ....+..++.+|..+.++.+-.. .+.|...++
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC--SSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC--CCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 22456666 455556666778899998875543333321 22234678888855555555433 366776665
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.96 E-value=0.049 Score=38.01 Aligned_cols=50 Identities=12% Similarity=0.011 Sum_probs=33.3
Q ss_pred CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 100 TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 100 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
++.|..||+.+++.+-++..... .....+.. .+.++..++.|+.++.+|.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~-~~~~~~~t---~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFA-AWGGTLYT---KGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSC-CCSBCEEE---TTTEEEEECTTSEEEEEET
T ss_pred CCeEEEEECCCCCEEEEecCCCC-ccceeEEE---CCCEEEEEcCCCeEEEEEC
Confidence 47899999999988776653221 11111221 3456777899999999986
No 275
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.94 E-value=0.012 Score=42.13 Aligned_cols=113 Identities=4% Similarity=-0.100 Sum_probs=64.3
Q ss_pred eEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCCCc
Q 038702 35 VHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPAQR 111 (154)
Q Consensus 35 v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~ 111 (154)
...|++.+. ++++++-...+.|.+.++.......+....... ...+++.|.+.+|+.... .+.|..+++...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~-----P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSK-----PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCC-----CCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCC-----cceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 456788754 445555556788999988765433332211111 113467776555544432 257777766432
Q ss_pred cceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 112 RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
....+.. .....+..++++|..+.++++-...+.|..+|++
T Consensus 530 -~~~~l~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 530 -DIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp -CCCEESC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred -CeeEEEe-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 2222221 1223346789998566677777778889888763
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.84 E-value=0.053 Score=36.49 Aligned_cols=118 Identities=14% Similarity=0.098 Sum_probs=70.1
Q ss_pred eEEEEEcCCCCEEE-EeeCCCeEEEEeccc--ccc--c-eeEeecCCCC---------ceEeEEEEEE---------cCC
Q 038702 35 VHSAYFSPSGSSLA-TTSFDDTIGIWSGVN--FEN--T-AMIHHNNQTG---------RWISSFRAIW---------GWD 90 (154)
Q Consensus 35 v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~--~~~--~-~~~~~~~~~~---------~~~~~~~~~~---------~~~ 90 (154)
-..++|+|+++.|+ +-...+.|..++... ... . .........+ .......+++ .++
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~ 354 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE 354 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC
Confidence 34699999998554 445578899877653 211 1 1111101000 1112335677 667
Q ss_pred CcEEEEEccCCeEEEecCCCccceeEEeCCC----------------cCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 91 DSCIFIGNMTRTVEVISPAQRRSVATLQSPY----------------ISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 91 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+.++++-...+.|+.++. ++. +.++-+.. .-..+..++++|.++.++++-...+.|+.++++
T Consensus 355 g~lyvaD~~n~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 355 YDFYFCDRDSHTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEEETTTTEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEECCCCEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 777777777788999985 443 33333211 112356789995477888887788899988764
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.82 E-value=0.037 Score=39.17 Aligned_cols=105 Identities=17% Similarity=0.108 Sum_probs=55.9
Q ss_pred EEEEEcC-CCCEEEEeeCCC-----------eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC---
Q 038702 36 HSAYFSP-SGSSLATTSFDD-----------TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT--- 100 (154)
Q Consensus 36 ~~~~~~~-~~~~l~~~~~d~-----------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--- 100 (154)
.++.|.. +++.++.|+.++ .+.+||..+..-........+..+.. ..++..|++++++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~--~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTF--HTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBS--CEEEECTTSCEEEECCBSBCC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCccc--CCeEECCCCCEEEECCcccCc
Confidence 3444433 677778877532 57777776554322210011111111 133456899999999864
Q ss_pred --------CeEEEecCCCccceeEEeCCCcCC-cceEEEecCCCccEEEEEcC
Q 038702 101 --------RTVEVISPAQRRSVATLQSPYISA-IPCRFHAHPHQVGTLAGATG 144 (154)
Q Consensus 101 --------~~i~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 144 (154)
..+.+||..+.+-.. +....... ........| ++++++.|+.
T Consensus 480 ~~~~~~~~~~v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~-dg~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQDTFYK-QNPNSIVRVYHSISLLLP-DGRVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGTEEEE-CCCCSSCCCTTEEEEECT-TSCEEEEECC
T ss_pred CcCCCCcccceEEEcCCCCceee-cCCCCCccccccHhhcCC-CcEEEecCCC
Confidence 458899987654221 11111111 112233456 7788988884
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.81 E-value=0.038 Score=34.44 Aligned_cols=142 Identities=7% Similarity=-0.033 Sum_probs=81.3
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccce---eEeec---CC
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTA---MIHHN---NQ 75 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~---~~~~~---~~ 75 (154)
...++.|...|.. ++ ..... +-....-.+++.+++.++++.-.++.+.++++....... ..... ..
T Consensus 45 ~d~~~~I~~ld~~-g~-----v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~ 118 (255)
T 3qqz_A 45 INKPAAIVEMTTN-GD-----LIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESP 118 (255)
T ss_dssp EETTEEEEEEETT-CC-----EEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCC
T ss_pred ECCCCeEEEEeCC-CC-----EEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeecccccccc
Confidence 3445556666665 32 22222 222457788898888776776667888888876654311 11100 01
Q ss_pred CCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC---CccceeEEeC------CCcCCcceEEEecCCCccEEEEEcCCC
Q 038702 76 TGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA---QRRSVATLQS------PYISAIPCRFHAHPHQVGTLAGATGGG 146 (154)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~d~ 146 (154)
...... .++|+|.+..|.++.......+|... ....+..+.. ..... ...++++|..+.+++.....+
T Consensus 119 ~N~g~E--GLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d-~S~l~~dp~tg~lliLS~~s~ 195 (255)
T 3qqz_A 119 TNCGFE--GLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD-VSGAEFNQQKNTLLVLSHESR 195 (255)
T ss_dssp CSSCCE--EEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC-CCEEEEETTTTEEEEEETTTT
T ss_pred ccCCcc--eEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC-ceeEEEcCCCCeEEEEECCCC
Confidence 111112 56899998777777665555555543 1112222211 11112 367899998888888888888
Q ss_pred eEEEeeCC
Q 038702 147 QVYVWTSD 154 (154)
Q Consensus 147 ~i~~wd~~ 154 (154)
.+..+|.+
T Consensus 196 ~L~~~d~~ 203 (255)
T 3qqz_A 196 ALQEVTLV 203 (255)
T ss_dssp EEEEECTT
T ss_pred eEEEEcCC
Confidence 88888763
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.063 Score=36.84 Aligned_cols=115 Identities=10% Similarity=-0.052 Sum_probs=68.7
Q ss_pred CeEEEEEcCC-CC-EEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEE-------cCCCcEEEEEccCC---
Q 038702 34 AVHSAYFSPS-GS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIW-------GWDDSCIFIGNMTR--- 101 (154)
Q Consensus 34 ~v~~~~~~~~-~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~d~--- 101 (154)
....|+|+|. .. ++++-...+.|++.|+.......+..... ...-....++| ++++.+|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~--~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT--IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT--SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc--cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 3568999983 44 44444445678888888766665543221 11123446789 99998666665443
Q ss_pred ----eEEEecCCC-ccce-----eEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 102 ----TVEVISPAQ-RRSV-----ATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 102 ----~i~i~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.|.+++... ++.. ..+. ....+..++.+|.++.++++-..++.|..+|+
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA---AYKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE---EESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred ccCceEEEEecCCCCceeecccceeec---cCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 255665333 2221 1222 11223567888866777777788889998875
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.78 E-value=0.047 Score=35.11 Aligned_cols=115 Identities=6% Similarity=-0.139 Sum_probs=67.8
Q ss_pred CCeEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc--cCCeEEEecCC
Q 038702 33 RAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN--MTRTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~ 109 (154)
.....+++.+. ++++++-...+.|.+.++.............. ....++..|.+..|+... ..+.|...++.
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~-----~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD-----QPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----SEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC-----CccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 35567889874 44555555678899999876543333221111 123456777655554444 24677777765
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
. .....+.. .....+..++++|..+.++.+-+..+.|..+|++
T Consensus 154 G-~~~~~~~~-~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 154 G-SSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp S-CSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCeEEEEE-CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 3 32333321 2233457889998566666666677889888764
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.77 E-value=0.06 Score=36.25 Aligned_cols=114 Identities=17% Similarity=0.116 Sum_probs=68.4
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEecccccc----------ce--eEeecC-CCCceEeEEEEEEcCC---CcEEEEE
Q 038702 34 AVHSAYFSPSGSSLATTSFDDTIGIWSGVNFEN----------TA--MIHHNN-QTGRWISSFRAIWGWD---DSCIFIG 97 (154)
Q Consensus 34 ~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~----------~~--~~~~~~-~~~~~~~~~~~~~~~~---~~~l~~~ 97 (154)
.|..+..+|+|++|+..+.. .|.+..+..+.. .. .+.... .......+.++.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57889999999999888544 688888773221 11 111111 0001123457789995 4589999
Q ss_pred ccCCeEEEecCCCcc--ceeEEeCCC-------cCCcceEEEecCCCccEEEE--EcCCCeEEE
Q 038702 98 NMTRTVEVISPAQRR--SVATLQSPY-------ISAIPCRFHAHPHQVGTLAG--ATGGGQVYV 150 (154)
Q Consensus 98 ~~d~~i~i~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~--~~~d~~i~~ 150 (154)
..|+.||+||+.... +. .++... ...-..+++|.+ ++-.|.. .+..|.|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCEEE
Confidence 999999999998522 22 332111 012235778877 5544444 447787764
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.69 E-value=0.028 Score=40.19 Aligned_cols=113 Identities=8% Similarity=-0.022 Sum_probs=60.0
Q ss_pred CCeEEEEEcCCCCEEEEeeC--CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCc-EEEEEccCCeEEEecCC
Q 038702 33 RAVHSAYFSPSGSSLATTSF--DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDS-CIFIGNMTRTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~--d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~~~~ 109 (154)
.....|+++|.+.+|+.+.. .+.|...++.......+...... ..-.++++|++. ++++-...+.|..+++.
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~-----~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-----WPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS-----SCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC-----CccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 34577888886554444432 26777777654333222211111 111457888755 44555566789999986
Q ss_pred CccceeEEeC-CCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 110 QRRSVATLQS-PYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 110 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
... ...+.. ......+..+++.. ..++++....+.|..+|.
T Consensus 571 G~~-~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 571 GGN-RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANR 612 (699)
T ss_dssp SSC-CEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEET
T ss_pred CCc-eEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEc
Confidence 433 233321 11112223455554 356666666778887764
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.65 E-value=0.11 Score=37.78 Aligned_cols=116 Identities=7% Similarity=-0.079 Sum_probs=69.1
Q ss_pred cCCeEEEEEcCCCCE-EEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecC
Q 038702 32 KRAVHSAYFSPSGSS-LATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISP 108 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~-l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~ 108 (154)
......|++.+.+.. +++-...+.|.+.++.......+...... ....+++.|...+|+.... .+.|...++
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-----~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-----CcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 345678999886654 44555678899999876554444332211 1335677887555554432 267887777
Q ss_pred CCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 109 AQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
.... ...+.. .....+..+++++..+.++++-.....|...|++
T Consensus 545 dG~~-~~~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 545 NGVD-IYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp TSCC-EEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCc-eEEEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 5433 333332 2223446788887566666665667788887763
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.56 E-value=0.11 Score=36.59 Aligned_cols=144 Identities=13% Similarity=0.015 Sum_probs=78.2
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceee--ccc--CCeEE-EEEcCCCCEEEEee------CCCeEEEEeccccccceeE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVL--SHK--RAVHS-AYFSPSGSSLATTS------FDDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~--~~~--~~v~~-~~~~~~~~~l~~~~------~d~~v~~~~~~~~~~~~~~ 70 (154)
+.++.|+.|.-+|..+++. .-+.. .+. ..+.+ ..+ .++ .++.++ .++.|.-+|.++++..-.+
T Consensus 125 ~v~t~dg~l~AlDa~TG~~----~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 125 LKTQLDGNVAALNAETGET----VWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEECTTSEEEEEETTTCCE----EEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEcCCCEEEEEECCCCCE----EEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 4566788888888877764 22211 110 01111 111 134 455554 3789999999988765433
Q ss_pred eecCCC----------------------------------CceEeEEEEEEcCCCcEEEEEccC----------------
Q 038702 71 HHNNQT----------------------------------GRWISSFRAIWGWDDSCIFIGNMT---------------- 100 (154)
Q Consensus 71 ~~~~~~----------------------------------~~~~~~~~~~~~~~~~~l~~~~~d---------------- 100 (154)
...... +..+. ...++.++...++.+..+
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W-~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNW-GWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCC-SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccc-cceeEeCCCCEEEEeCCCCccccCcccCCCcccc
Confidence 321110 00000 012345566666666544
Q ss_pred CeEEEecCCCccceeEEeCCCcC-------CcceEEEec-CCCc---cEEEEEcCCCeEEEeeC
Q 038702 101 RTVEVISPAQRRSVATLQSPYIS-------AIPCRFHAH-PHQV---GTLAGATGGGQVYVWTS 153 (154)
Q Consensus 101 ~~i~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~---~~l~~~~~d~~i~~wd~ 153 (154)
+.|..+|.++++.+-.++..+.. ....-+... . ++ ..++.++.+|.++++|.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~-~G~~~~~v~~~~~~G~l~~lD~ 340 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDK-DGKARKLLTHPDRNGIVYTLDR 340 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECT-TSCEEEEEEEECTTSEEEEEET
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEecccc-CCcEEEEEEEECCCcEEEEEEC
Confidence 47899999999988776643211 011112221 2 34 46777889999999886
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.54 E-value=0.11 Score=36.38 Aligned_cols=51 Identities=10% Similarity=0.115 Sum_probs=34.1
Q ss_pred CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 100 TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 100 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+|.|..||+.+++.+-+...... .....+.. .+.+++.++.|+.++.||.+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~t---agglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLP-LWAGVLAT---AGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-CCSCCEEE---TTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEECCCCCEEEEecCCCC-CcccceEe---CCCEEEEECCCCcEEEEECC
Confidence 57899999999988766653221 11111222 34677779999999999863
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.49 E-value=0.074 Score=33.74 Aligned_cols=137 Identities=8% Similarity=-0.050 Sum_probs=69.8
Q ss_pred CCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCC-C-eEEEEeccccccceeEeecCCCCceEeEE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFD-D-TIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
.++.|..||.... .............++++++++++++.... + .+..++..+++......... .....
T Consensus 51 ~~~~I~~~d~~g~------~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~--~~~~~-- 120 (306)
T 2p4o_A 51 EVGEIVSITPDGN------QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPD--AIFLN-- 120 (306)
T ss_dssp TTTEEEEECTTCC------EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTT--CSCEE--
T ss_pred CCCeEEEECCCCc------eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCC--ccccC--
Confidence 3455555554321 22223334568899999999866655432 2 46666766655433222211 11111
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCccc-eeEEeC-------CCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQRRS-VATLQS-------PYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
..+..+++..+++-..++.|..+|...++. +..... .........+ +|+.+.++++-...+.|..+|++
T Consensus 121 g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 121 GITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBC
T ss_pred cccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeC
Confidence 223344555555555678888888765421 111100 0111122334 55233456666678899988863
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.47 E-value=0.095 Score=34.83 Aligned_cols=117 Identities=6% Similarity=-0.079 Sum_probs=69.7
Q ss_pred ccCCeEEEEEcC-CCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc--CCeEEEec
Q 038702 31 HKRAVHSAYFSP-SGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM--TRTVEVIS 107 (154)
Q Consensus 31 ~~~~v~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~ 107 (154)
.......+++.+ .++++++-...+.|.+.++.............. ....++..|.+.+|+.... .+.|...+
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-----~P~~iavdp~~g~ly~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGG 231 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC-----CEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC-----CcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence 344677899988 455555556678899998876554433322111 1235577886555554432 36777777
Q ss_pred CCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 108 PAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
+.... ...+.. .....+..++++|..+.++++-...+.|..+|++
T Consensus 232 ~dG~~-~~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 232 LNGVD-IYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp TTSCS-CEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCc-cEEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 75433 233321 2223457889998555666666677888888764
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.45 E-value=0.16 Score=37.09 Aligned_cols=134 Identities=12% Similarity=-0.020 Sum_probs=71.5
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccc----cceeEeecCCCCceEeE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFE----NTAMIHHNNQTGRWISS 82 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~ 82 (154)
..|+..++.... ...+......+..|+|++... ++++-...+.|..+++.... ...++..... ..
T Consensus 404 ~~Ir~i~l~~~~-----~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~-----~P 473 (791)
T 3m0c_C 404 HEVRKMTLDRSE-----YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-----AP 473 (791)
T ss_dssp SSEEEECTTSCC-----CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-----CC
T ss_pred cceeEeeccCCc-----ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC-----Cc
Confidence 345555554332 333444456678999998554 44455557788888887532 1222221111 11
Q ss_pred EEEEEcCCC-cEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-CeEEEeeC
Q 038702 83 FRAIWGWDD-SCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-GQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~~i~~wd~ 153 (154)
..+++.+.+ +++.+-...+.|.+.++.... ...+... ....+..++++|..+.++++-... +.|...++
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~-~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeC-CCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 234566655 455555667889999887443 3333221 122246788888555555554333 67776665
No 289
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.45 E-value=0.13 Score=36.06 Aligned_cols=98 Identities=8% Similarity=0.040 Sum_probs=63.5
Q ss_pred EEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeC-CCeEEEEeccccccc----------eeEeecCCCCc
Q 038702 10 ACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSF-DDTIGIWSGVNFENT----------AMIHHNNQTGR 78 (154)
Q Consensus 10 v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~~~~~~~~~~~----------~~~~~~~~~~~ 78 (154)
|.|.|.+..............-......+.++|+|++++.++. +.++.++|.+..... ...... + .
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e--~ 376 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-E--L 376 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-B--C
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-c--C
Confidence 6777776521101113444455666778999999998877664 889999999853211 111111 1 1
Q ss_pred eEeEEEEEEcCCCcEEEEEccCCeEEEecCCC
Q 038702 79 WISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ 110 (154)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 110 (154)
-...+..+|.++|....+-.-|..|--|++..
T Consensus 377 GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 377 GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 23456778999996666777899999999874
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.32 E-value=0.11 Score=34.02 Aligned_cols=141 Identities=10% Similarity=0.011 Sum_probs=74.7
Q ss_pred CCCcEEEEEccCCCCCCCCCceeec-----ccCCeEEEEEcC--CCC-EEEEe-eC--CCeEEEEeccccccce-eEeec
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVLS-----HKRAVHSAYFSP--SGS-SLATT-SF--DDTIGIWSGVNFENTA-MIHHN 73 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~--d~~v~~~~~~~~~~~~-~~~~~ 73 (154)
.+|.|.++|..+..... ....+.+ ..-....+.+.+ +++ +|+.+ .. +.++.+|++....... .....
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 68899999987533211 1222222 234677788755 343 34333 22 5678888776543322 22111
Q ss_pred CCCCceEeEEEEEEcCCCcEEEEEc-----------------cCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCc
Q 038702 74 NQTGRWISSFRAIWGWDDSCIFIGN-----------------MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQV 136 (154)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
. .......-.+...++|.++++.. ..|.|.-++. ++ +..+. ..-..+..++|+| ++
T Consensus 160 ~-g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~--~~l~~pNGia~sp-Dg 232 (355)
T 3sre_A 160 R-HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVA--EGFDFANGINISP-DG 232 (355)
T ss_dssp C-CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEE--EEESSEEEEEECT-TS
T ss_pred c-cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEee--cCCcccCcceECC-CC
Confidence 1 11111222456778888777754 1244555554 32 22222 1223457899999 55
Q ss_pred c-EEEEEcCCCeEEEeeCC
Q 038702 137 G-TLAGATGGGQVYVWTSD 154 (154)
Q Consensus 137 ~-~l~~~~~d~~i~~wd~~ 154 (154)
+ ++++-+..+.|..|+++
T Consensus 233 ~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp SEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEEEC
Confidence 4 55566678899998863
No 291
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.27 E-value=0.2 Score=36.34 Aligned_cols=115 Identities=10% Similarity=0.077 Sum_probs=62.7
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec-CCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCC
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN-NQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQ 110 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 110 (154)
...|.++...++++.|..|+.++-+..+|..+.+........ ...... +..+...+++.+.+... +-+..|+..+
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~--v~~i~~d~~g~lwigt~--~Gl~~~~~~~ 480 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNEN--VYAILPDGEGNLWLGTL--SALVRFNPEQ 480 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSC--EEEEEECSSSCEEEEES--SCEEEEETTT
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCe--eEEEEECCCCCEEEEec--CceeEEeCCC
Confidence 357899999888885666777666889998765433221100 011122 33455677777665543 4578888876
Q ss_pred ccceeEEeC----CCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 111 RRSVATLQS----PYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 111 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
++....... ........++...+ ++.+.+.. . +-+..||.
T Consensus 481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt-~-~Gl~~~~~ 524 (795)
T 4a2l_A 481 RSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGG-E-EGLSVFKQ 524 (795)
T ss_dssp TEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEE-S-SCEEEEEE
T ss_pred CeEEEccccccccccCCceEEEEEECC-CCCEEEEe-C-CceEEEeC
Confidence 543221111 00112224566666 55555544 3 44666653
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.25 E-value=0.12 Score=33.69 Aligned_cols=107 Identities=10% Similarity=0.007 Sum_probs=56.2
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCC---CcEEEEEcc-C-----Ce
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWD---DSCIFIGNM-T-----RT 102 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~-d-----~~ 102 (154)
-.....++|.|+|+++++ ..++.|.+++ ......................++++|+ +..|..+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 445679999999985555 5669999988 3322111111100000112446789998 444444433 2 56
Q ss_pred EEEecCCCcc-----ce-eEEeC-CCcCCcceEEEecCCCccEEEEE
Q 038702 103 VEVISPAQRR-----SV-ATLQS-PYISAIPCRFHAHPHQVGTLAGA 142 (154)
Q Consensus 103 i~i~~~~~~~-----~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 142 (154)
|..++..... .+ ..+.. .........+++.| ++.++++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEE
Confidence 7777766431 11 11221 01111224688999 77766664
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.81 E-value=0.21 Score=32.64 Aligned_cols=106 Identities=8% Similarity=-0.084 Sum_probs=55.0
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCC---CcEEEEEcc----C----
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWD---DSCIFIGNM----T---- 100 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~----d---- 100 (154)
-.....++|.|+|+++++ ..++.|.+++. ++. ..+..........-..+.++++|+ +..|..+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345789999999985554 56699998873 333 111111000000112446789997 444443332 2
Q ss_pred CeEEEecCCCc-------cce-eEEeCCCcCCcceEEEecCCCccEEEEE
Q 038702 101 RTVEVISPAQR-------RSV-ATLQSPYISAIPCRFHAHPHQVGTLAGA 142 (154)
Q Consensus 101 ~~i~i~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 142 (154)
+.|..++.... +.+ ..+... .......++|.| ++.++++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~-~~h~~~~l~~~p-DG~Lyvt~ 152 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGA-YIHNGGRIRFGP-DGMLYITT 152 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECC-SSCCCCCEEECT-TSCEEEEC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCC-CCcCCceEEECC-CCcEEEEE
Confidence 55666665533 111 112211 111224688999 77766664
No 294
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.80 E-value=0.17 Score=31.55 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=66.7
Q ss_pred cccCCeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecC
Q 038702 30 SHKRAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISP 108 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~ 108 (154)
+-...+..++|+|++..| ++...++.|...|.. ++......... ... .. .+++.+++.++++.-.++.+.++++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D-~E--GIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKD-LE--TIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSS-EE--EEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCC-hH--HeEEeCCCEEEEEECCCCcEEEEEc
Confidence 344679999999976654 457778889888987 44333332211 111 11 3456788887777666778888887
Q ss_pred CCccc---eeEEeC-----CCcCCcceEEEecCCCccEEEEEcCCC-eEEEe
Q 038702 109 AQRRS---VATLQS-----PYISAIPCRFHAHPHQVGTLAGATGGG-QVYVW 151 (154)
Q Consensus 109 ~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~~w 151 (154)
..... +....- +.... .-.++++|....++++.-.+. .|+.|
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g-~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCG-FEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSC-CEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CCCCeeeeeeeeccccccccccCC-cceEEEeCCCCEEEEEECcCCceEEEE
Confidence 64432 222221 11122 257899994434444443443 44444
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.74 E-value=0.23 Score=32.48 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=58.0
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccce-eEe-ecCCCCceEeEEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTA-MIH-HNNQTGRWISSFRA 85 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 85 (154)
.++.++|+++.. ..+.......|.--+|-.+..+ +-.+ +..|.-|+++....+. .+. +....+ .+.+..
T Consensus 87 ~~LQiFnletK~-----klks~~~~e~VvfWkWis~~~L-~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~--~QIInY 157 (365)
T 2xzh_A 87 KTLQIFNIEMKS-----KMKAHTMTDDVTFWKWISLNTV-ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG--CQIINY 157 (365)
T ss_dssp TEEEEEETTTTE-----EEEEEECSSCEEEEEECSSSEE-EEEE-SSEEEEEESSTTCCCEEEEECCGGGTT--CEEEEE
T ss_pred CeEEEechHHhh-----hhcceecCCccEEEEecCCCeE-EEEc-CCcEEEEcccCCCCCceeeecchhccc--ceEEEE
Confidence 457777776644 2333344567778888654433 2222 3568889987644442 332 322222 344455
Q ss_pred EEcCCCcEEEEEc-------cCCeEEEecCCCccceeEEeCC
Q 038702 86 IWGWDDSCIFIGN-------MTRTVEVISPAQRRSVATLQSP 120 (154)
Q Consensus 86 ~~~~~~~~l~~~~-------~d~~i~i~~~~~~~~~~~~~~~ 120 (154)
..+++.++++..+ -.|.+.+|..+.+. -+.+.+|
T Consensus 158 ~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh 198 (365)
T 2xzh_A 158 RTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH 198 (365)
T ss_dssp EECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCS
T ss_pred EECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeee
Confidence 6788888665543 24678889887543 2344444
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.29 E-value=0.49 Score=33.51 Aligned_cols=115 Identities=7% Similarity=-0.108 Sum_probs=67.0
Q ss_pred CCeEEEEEcCCCC-EEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc--CCeEEEecCC
Q 038702 33 RAVHSAYFSPSGS-SLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM--TRTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~ 109 (154)
.....+++.+.+. ++++-...+.|.+.++............... ...+++.|.+.+|+.... .+.|...++.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~-----P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQ-----PRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC-----CCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCC-----CceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 4678999998555 4455556789999998765544433211111 124567776555544442 3456555554
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
|.....+-.. ....+..+++++..+.++++-...+.|...|++
T Consensus 159 -G~~~~~l~~~-~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 159 -GSSRFIIINS-EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp -SCSCEEEECS-SCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred -CCceEEEEeC-CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 3333333221 233456788888555666666677788877763
No 297
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.06 E-value=0.49 Score=32.25 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=55.6
Q ss_pred CcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccce-eEe-ecCCCCceEeEEEE
Q 038702 8 GTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTA-MIH-HNNQTGRWISSFRA 85 (154)
Q Consensus 8 ~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 85 (154)
.++.++|+++.. ..+.......|..-+|-.+.. |+-. .+..|.-|++.....+. .+. +....+ ...+..
T Consensus 86 ~~lQiFnle~K~-----klks~~~~e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~--~QIInY 156 (494)
T 1bpo_A 86 KTLQIFNIEMKS-----KMKAHTMTDDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG--CQIINY 156 (494)
T ss_dssp TEEEEEETTTTE-----EEEEEECSSCCCEEEEEETTE-EEEE-CSSEEEEEESSSSCCCEEEEECCGGGTT--CEEEEE
T ss_pred CeEEEEchHHhh-----hhcceecCCCceEEEecCCCe-EEEE-cCCeeEEecccCCCCchhheecchhccc--ceEEEE
Confidence 456666665543 222223345666777754433 3222 24568889987644442 232 332222 344455
Q ss_pred EEcCCCcEEEEEc-------cCCeEEEecCCCccceeEEeCC
Q 038702 86 IWGWDDSCIFIGN-------MTRTVEVISPAQRRSVATLQSP 120 (154)
Q Consensus 86 ~~~~~~~~l~~~~-------~d~~i~i~~~~~~~~~~~~~~~ 120 (154)
..+++.++++..+ -.|.+.+|..+.+.. +.+.+|
T Consensus 157 ~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGh 197 (494)
T 1bpo_A 157 RTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGH 197 (494)
T ss_dssp EECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCS
T ss_pred EECCCCCeEEEEeecccCCcccceEEEeecccccc-chheee
Confidence 6788888766443 346788998875542 345544
No 298
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.87 E-value=0.55 Score=31.82 Aligned_cols=110 Identities=9% Similarity=0.029 Sum_probs=65.7
Q ss_pred EcCCCCEEEEeeCCCeEEEEeccccccceeEeecC--CCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCcc-----
Q 038702 40 FSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN--QTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRR----- 112 (154)
Q Consensus 40 ~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~----- 112 (154)
.+.++..++.+ .++.||.-++.....-..+.... .... ...+..+|+|.+|+..+. ..|.|-.+..+.
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~---i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDD---TFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCT---TCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCC
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCc---eeEEEECCCCCEEEEecC-CeEEEEEecCccccCcc
Confidence 34466666555 45788888877543322332221 1111 124567999999998874 477887776221
Q ss_pred -------ceeEEeCCC----cCCcceEEEecCCC--ccEEEEEcCCCeEEEeeCC
Q 038702 113 -------SVATLQSPY----ISAIPCRFHAHPHQ--VGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 113 -------~~~~~~~~~----~~~~~~~~~~~~~~--~~~l~~~~~d~~i~~wd~~ 154 (154)
..+.+.-.. .......+.|||-. +..|++-..|+.|++||++
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 011222111 11223678999953 3379999999999999984
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.81 E-value=0.37 Score=29.56 Aligned_cols=106 Identities=17% Similarity=0.069 Sum_probs=59.1
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccc------eeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEe
Q 038702 33 RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENT------AMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVI 106 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 106 (154)
..+..++|+|+|.+.+. .+|.+.-.+..+.... ..+....-.. . -.+.|.|+|.+.++ .||.|+-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~--F--~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ--F--QFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG--C--SEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc--c--eEEEECCCCCEEEe--CCCEEEEe
Confidence 47789999999986666 7777666665442222 1111101000 0 13568899988877 56988777
Q ss_pred cCCCccce-----eEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 107 SPAQRRSV-----ATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 107 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
+..+.... .+.-+.........+.+.| ++.+.+.. |+.++
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFY 157 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEE
Confidence 76432211 1111111222235678888 77766665 66653
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.55 E-value=0.59 Score=30.71 Aligned_cols=100 Identities=10% Similarity=0.035 Sum_probs=53.7
Q ss_pred CCeEEEEEcCCCCEEEEeeC-----------------CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEE
Q 038702 33 RAVHSAYFSPSGSSLATTSF-----------------DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIF 95 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~-----------------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (154)
...+.+.+.++|++.++... .|.+.-++. .+......... ..-.++|+|+++.++
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~------~pNGia~spDg~~lY 236 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFD------FANGINISPDGKYVY 236 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEES------SEEEEEECTTSSEEE
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCc------ccCcceECCCCCEEE
Confidence 45788999999987776541 233444443 22111111111 112568999998766
Q ss_pred EE-ccCCeEEEecCCC-ccc--eeEEeCCCcCCcceEEEecCCCccEEEEEc
Q 038702 96 IG-NMTRTVEVISPAQ-RRS--VATLQSPYISAIPCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 96 ~~-~~d~~i~i~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 143 (154)
.+ +..+.|+.|++.. ++. ...+.. ...+-.++.+++++++.+++.
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~~~---~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVLSF---DTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEEC---SSEEEEEEECTTTCCEEEEEE
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEEeC---CCCCceEEEeCCCCcEEEEec
Confidence 55 4678899999863 322 122211 222344566652256666554
No 301
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.50 E-value=1.1 Score=33.60 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=30.6
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEe
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQ 118 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 118 (154)
..++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 239 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 455667788899999999999999999999887754
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.47 E-value=0.62 Score=30.61 Aligned_cols=137 Identities=11% Similarity=0.089 Sum_probs=75.0
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCC----CC---EEEEeeC---CCeEEEEecc--ccccceeEe
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPS----GS---SLATTSF---DDTIGIWSGV--NFENTAMIH 71 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---d~~v~~~~~~--~~~~~~~~~ 71 (154)
....+-+.+||+ +++ ..+.... +.++.+..-|. |+ +.++... +++|.++++. +.. .....
T Consensus 46 t~k~~gL~Vydl-~G~-----~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~ 117 (355)
T 3amr_A 46 TNKKSGLVVYSL-DGK-----MLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT 117 (355)
T ss_dssp EETTTEEEEEET-TSC-----EEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred EcCCCCEEEEcC-CCc-----EEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc
Confidence 344567999999 444 3443322 56777777662 22 2333333 5789999773 322 22221
Q ss_pred ec--C-CCC-ceEeEEEEEEcCC-Cc-EEEEEccCCeEEEecCC-------CccceeEEeCCCcCCcceEEEecCCCccE
Q 038702 72 HN--N-QTG-RWISSFRAIWGWD-DS-CIFIGNMTRTVEVISPA-------QRRSVATLQSPYISAIPCRFHAHPHQVGT 138 (154)
Q Consensus 72 ~~--~-~~~-~~~~~~~~~~~~~-~~-~l~~~~~d~~i~i~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (154)
.. . ... ....-+++--+|. +. +++....+|.+..|++. +.+.++++.... ..-.+...+ ....
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs---q~EgcvvDd-~~g~ 193 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS---QTEGMAADD-EYGR 193 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS---CEEEEEEET-TTTE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC---CcceEEEcC-CCCe
Confidence 10 0 000 1112222212564 43 68888899999999883 345667766432 224566776 4466
Q ss_pred EEEEcCCCeEEEee
Q 038702 139 LAGATGGGQVYVWT 152 (154)
Q Consensus 139 l~~~~~d~~i~~wd 152 (154)
|..+-++.-|..+|
T Consensus 194 Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 194 LYIAEEDEAIWKFS 207 (355)
T ss_dssp EEEEETTTEEEEEE
T ss_pred EEEecccceEEEEe
Confidence 77777776665555
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.45 E-value=0.19 Score=32.73 Aligned_cols=115 Identities=9% Similarity=0.010 Sum_probs=62.2
Q ss_pred CeeecCCCcEEEEEccCCCCCCCCCceeecc-cCCeEEEEE--cC-CCCEEEEe-eCCCeEEEEeccccccceeEeecCC
Q 038702 1 MATSSTDGTACIWDLRSMATDKPEPTKVLSH-KRAVHSAYF--SP-SGSSLATT-SFDDTIGIWSGVNFENTAMIHHNNQ 75 (154)
Q Consensus 1 l~~~~~d~~v~vw~~~~~~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~ 75 (154)
++.++.||.|.-.|..+++. .-++... ..++....- .+ ++..++.. +.||.+..++..++...........
T Consensus 13 V~v~t~dG~l~Ald~~tG~~----~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHI----IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 36788999999999887763 1222111 122222110 01 22333333 5799999888877643322221110
Q ss_pred C-CceEeE-EEEEE-c----CCCcEEEEEccCCeEEEecCCCccceeEEeC
Q 038702 76 T-GRWISS-FRAIW-G----WDDSCIFIGNMTRTVEVISPAQRRSVATLQS 119 (154)
Q Consensus 76 ~-~~~~~~-~~~~~-~----~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 119 (154)
. ...... -.... . ..+..+++|+.++.+...|+++|+.+..+..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 0 000000 00000 0 1456788999999999999999998887763
No 304
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.12 E-value=0.86 Score=30.95 Aligned_cols=34 Identities=12% Similarity=-0.008 Sum_probs=24.8
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccc
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFE 65 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~ 65 (154)
-.....|+|.|+|+++++-...+.|.+++..++.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 4466799999999977776555578888765433
No 305
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.94 E-value=1.3 Score=32.19 Aligned_cols=114 Identities=9% Similarity=-0.067 Sum_probs=61.1
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecC--CCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNN--QTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA 109 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~ 109 (154)
...|.++...++++..+. +.. -+..+|..+.+......... ..... +..+...+++.+.+.....| +..+|..
T Consensus 449 ~~~v~~i~~d~~g~lwig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~--i~~i~~d~~g~lWigt~~~G-l~~~~~~ 523 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIG-THA-GVFVIDLASKKVIHHYDTSNSQLLENF--VRSIAQDSEGRFWIGTFGGG-VGIYTPD 523 (781)
T ss_dssp CCCEEEEEECTTSEEEEE-ETT-EEEEEESSSSSCCEEECTTTSSCSCSC--EEEEEECTTCCEEEEESSSC-EEEECTT
T ss_pred CCeEEEEEECCCCCEEEE-ECC-ceEEEeCCCCeEEecccCcccccccce--eEEEEEcCCCCEEEEEcCCC-EEEEeCC
Confidence 457889988888875554 444 47888887655433221110 01122 33455677777665443344 6778876
Q ss_pred CccceeEEeCCC--cCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 110 QRRSVATLQSPY--ISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 110 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+++. ..+.... ......++...+ ++.+.++ +.+|.+..||.
T Consensus 524 ~~~~-~~~~~~~~l~~~~i~~i~~d~-~g~lWi~-T~~Glv~~~d~ 566 (781)
T 3v9f_A 524 MQLV-RKFNQYEGFCSNTINQIYRSS-KGQMWLA-TGEGLVCFPSA 566 (781)
T ss_dssp CCEE-EEECTTTTCSCSCEEEEEECT-TSCEEEE-ETTEEEEESCT
T ss_pred CCeE-EEccCCCCCCCCeeEEEEECC-CCCEEEE-ECCCceEEECC
Confidence 6543 2332111 112225566666 5555554 34665477764
No 306
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.22 E-value=1 Score=28.92 Aligned_cols=133 Identities=5% Similarity=-0.082 Sum_probs=73.0
Q ss_pred CCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEEee--CCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATTS--FDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
.+.|.+.++.... ...+. ........+++.|.+..++.+. ..+.|...++............. ...-
T Consensus 100 ~~~I~~~~~dG~~-----~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l-----~~Pn 169 (318)
T 3sov_A 100 TNRIEVSNLDGSL-----RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-----YWPN 169 (318)
T ss_dssp TTEEEEEETTSCS-----CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----SCEE
T ss_pred CCEEEEEECCCCc-----EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC-----CCcc
Confidence 4456666654322 12222 3345678999998655555544 35778887776543333222111 1223
Q ss_pred EEEEcCCCcEEE-EEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 84 RAIWGWDDSCIF-IGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 84 ~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+++++++..|. +-...+.|..+++.... ...+.. .....+..++... +.++.+-...+.|..+|.
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~-~~~~~P~glav~~--~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVK-GSLPHPFALTLFE--DILYWTDWSTHSILACNK 236 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC-SCCSCEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEec-CCCCCceEEEEeC--CEEEEEecCCCeEEEEEC
Confidence 568898665554 44566789999886433 233321 1122334556553 456666667778877765
No 307
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.03 E-value=1.9 Score=31.40 Aligned_cols=117 Identities=9% Similarity=0.067 Sum_probs=66.0
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec---CCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecC
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN---NQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISP 108 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~ 108 (154)
...|.++...++|+..+ |+.++-|..++..+.......... ......+ .++...+++.+.+ |+.++-|..|+.
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V--~~i~~d~~g~lWi-Gt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVV--SCIVEDKDKNLWI-GTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSE--EEEEECTTSCEEE-EESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCee--EEEEECCCCCEEE-EECCCCeEEEcC
Confidence 35799999999887554 555556888887654332221111 1111223 3445666776554 666767888998
Q ss_pred CCccceeEEeCC------CcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 109 AQRRSVATLQSP------YISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 109 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.+++........ -......++...+ ++..|-.|+.++-|..||.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEET
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeC
Confidence 766533221111 0112235666666 5563556677667888775
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.96 E-value=1.8 Score=30.86 Aligned_cols=136 Identities=10% Similarity=-0.046 Sum_probs=77.3
Q ss_pred CCCcEEEEEccCCCCCCCCCceee--cccCCeEEEEEcCCCCEEE-EeeCCCeEEEEeccccccceeEeecCCCCceEeE
Q 038702 6 TDGTACIWDLRSMATDKPEPTKVL--SHKRAVHSAYFSPSGSSLA-TTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISS 82 (154)
Q Consensus 6 ~d~~v~vw~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (154)
....|+..++..... .... ..-..+..++|++....++ +-..++.|..+++............... .
T Consensus 13 ~~~~I~~i~l~~~~~-----~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~-----P 82 (628)
T 4a0p_A 13 RRADIRRISLETNNN-----NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY-----P 82 (628)
T ss_dssp ETTEEEEEESSCTTC-----EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC-----C
T ss_pred eCCcEEEEECCCCCc-----ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCC-----c
Confidence 456788888875432 1111 2334678999999665554 5456788988888765443333221111 1
Q ss_pred EEEEEcCCC-cEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEc-CCCeEEEeeC
Q 038702 83 FRAIWGWDD-SCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGAT-GGGQVYVWTS 153 (154)
Q Consensus 83 ~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~~wd~ 153 (154)
..+++.+.+ +++.+-...+.|.+.++.... ...+.. .....+..++.+|..+.++.+-. ..+.|...++
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 134556544 445555566788888886443 233321 12233468889985665555542 2456766654
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.76 E-value=1.3 Score=29.01 Aligned_cols=133 Identities=8% Similarity=0.027 Sum_probs=72.0
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcC--C-CCEEEEeeC---CCeEEEEecccc--cc-ce-----eE-e
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSP--S-GSSLATTSF---DDTIGIWSGVNF--EN-TA-----MI-H 71 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---d~~v~~~~~~~~--~~-~~-----~~-~ 71 (154)
.|.+.+|..+.+. ...+.+|.+.-..+.+.- . .+.|+.+.. .+++++.++... .. .. .. .
T Consensus 179 ~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~f 253 (365)
T 2xzh_A 179 VGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFF 253 (365)
T ss_dssp EEEEEEEETTTTE-----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECC
T ss_pred ceeEEEEeecccc-----cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeC
Confidence 3567778776543 344447766544444322 1 123444333 258999988543 11 11 01 1
Q ss_pred ecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 72 HNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
....... -.+.+..++.-..+..-++-|.+++||++++.++..-+-...... . -+.+. ...-++.....|.|.
T Consensus 254 ppea~~D--FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF-~-ta~~~-~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 254 PPEAQND--FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF-V-TAPHE-ATAGIIGVNRKGQVL 326 (365)
T ss_dssp CTTCTTC--CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-E-EEEEG-GGTEEEEEETTCEEE
T ss_pred CccccCC--ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceE-E-ecccC-CCCcEEEEcCCCEEE
Confidence 1111111 123455677777788888999999999999999887764443333 2 23332 223344444666654
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.68 E-value=1 Score=27.71 Aligned_cols=64 Identities=6% Similarity=-0.109 Sum_probs=39.1
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCccc------eeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQRRS------VATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
.++|+|++.+.+. .+|.++-.+..+.+. -..+- .......-.+.++| ++.+.++ .||.|+-++.
T Consensus 45 ~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG-~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 45 FLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIG-NGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp EEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEE-CSCGGGCSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred eEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEec-ccccccceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 6789999886666 778877777654221 12221 11111124678888 7777766 5688877653
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.64 E-value=1.2 Score=28.08 Aligned_cols=101 Identities=11% Similarity=0.013 Sum_probs=51.3
Q ss_pred CCCEEEEeeC---------CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecC
Q 038702 43 SGSSLATTSF---------DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISP 108 (154)
Q Consensus 43 ~~~~l~~~~~---------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~ 108 (154)
+++.++.|+. -..+.+||+.+..-...... +...... .++ ..++++++.|+.+ ..+.+||+
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM--IEARKNH--GLV-FVKDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC--SSCCBSC--EEE-EETTEEEEECCEETTEEBCCEEEEET
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc--cchhhcc--eEE-EECCEEEEEeCCCCCCCCceEEEeeC
Confidence 5666666654 34478888876643322111 1111111 111 1267777777754 35888998
Q ss_pred CCccc--eeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 109 AQRRS--VATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 109 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
.+.+- +..+..... . ..++.. ++.+++.|+.+ ..+.+||+
T Consensus 224 ~~~~W~~~~~~p~~r~-~--~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 224 KLNEWKMVSPMPWKGV-T--VKCAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp TTTEEEECCCCSCCBS-C--CEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred CCCcEEECCCCCCCcc-c--eeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 76532 222221111 1 122222 45778888744 46777876
No 312
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.26 E-value=1.1 Score=33.49 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=30.8
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEecccccccee
Q 038702 33 RAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAM 69 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~ 69 (154)
..+.++...++..++++-+.|+++|+|++.+++....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3567777778888999999999999999998876543
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.25 E-value=1.6 Score=28.53 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=23.0
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEecc
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGV 62 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~ 62 (154)
-.....|+|.|+|+.++.+...|.|++++..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 4456899999999834444567999998753
No 314
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.15 E-value=2.3 Score=30.28 Aligned_cols=114 Identities=5% Similarity=-0.107 Sum_probs=66.3
Q ss_pred CCeEEEEEcCCCCEE-EEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc--cCCeEEEecCC
Q 038702 33 RAVHSAYFSPSGSSL-ATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN--MTRTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~ 109 (154)
.....+++.+.+..| ++-...+.|.+.++.............. ....++..|...+|+... ..+.|...++.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~-----~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD-----SPRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC-----CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC-----CcccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 356788888765544 5555578899999876544333321111 233567788555554444 24567666665
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
... ...+-. ....+..+++++..+.++++-...+.|...|++
T Consensus 155 G~~-~~~l~~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 155 GSE-RTTLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp SCS-CEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCc-eEEEEC--CCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 333 233322 223456788888555566666677788887763
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.73 E-value=1.6 Score=27.43 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=52.8
Q ss_pred CCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCcc
Q 038702 43 SGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRR 112 (154)
Q Consensus 43 ~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~ 112 (154)
+++.++.|+.+ ..+.+||+.+..-...... +....... ++ ..++++++.|+.+ ..+.+||+.+.+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~--~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM--ATKRSGAG--VA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC--SSCCBSCE--EE-EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC--Ccccccce--EE-EECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 66677777654 4578888876543322111 11111111 11 1256777787764 468899988654
Q ss_pred ceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 113 SVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
-...-..+..... ..++.. ++.+++.|+.+ ..+.+||+
T Consensus 234 W~~~~~~p~~r~~-~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 234 WTTVTSMTTPRCY-VGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp EEEECCCSSCCBS-CEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred EEECCCCCCcccc-eeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 3222111111111 222222 45677777755 35777776
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.68 E-value=3.7 Score=31.67 Aligned_cols=139 Identities=11% Similarity=0.093 Sum_probs=71.2
Q ss_pred cCCCcEEEEEccCCCCCCCCCceee-cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEE
Q 038702 5 STDGTACIWDLRSMATDKPEPTKVL-SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSF 83 (154)
Q Consensus 5 ~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
+...+|++|++...+. .... .+-..|..+.....+++++.|..-..+.+...+................++.
T Consensus 901 ~ig~~l~vy~l~~~~~-----L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vt-- 973 (1158)
T 3ei3_A 901 SINSTVRLYEWTTEKE-----LRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS-- 973 (1158)
T ss_dssp EETTEEEEEEECTTSC-----EEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEE--
T ss_pred EcCCEEEEEECCCCce-----EEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEE--
Confidence 3457899999976442 2211 2222233333333678899998877777766543322222222222333443
Q ss_pred EEEEcCCCcEEEEEccCCeEEEecCCCc-------cceeEEeCCCcCCcceEEE---ecCCC--------ccEEEEEcCC
Q 038702 84 RAIWGWDDSCIFIGNMTRTVEVISPAQR-------RSVATLQSPYISAIPCRFH---AHPHQ--------VGTLAGATGG 145 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~l~~~~~d 145 (154)
++.+- +...++.+..+|++.+...... +.+.....-+.+....++. +.+.. ...++.++.+
T Consensus 974 a~~~l-d~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~ 1052 (1158)
T 3ei3_A 974 AVEIL-DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVN 1052 (1158)
T ss_dssp EEEEE-ETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETT
T ss_pred EEEEE-ccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecC
Confidence 33343 2346777889999998865431 1221111112222223443 22211 3457788889
Q ss_pred CeEEEe
Q 038702 146 GQVYVW 151 (154)
Q Consensus 146 ~~i~~w 151 (154)
|.|.+.
T Consensus 1053 GsIg~l 1058 (1158)
T 3ei3_A 1053 GMIGLV 1058 (1158)
T ss_dssp SCEEEE
T ss_pred CEEEEE
Confidence 988764
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.61 E-value=1.6 Score=27.40 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=52.2
Q ss_pred CCCEEEEeeCC-------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCC
Q 038702 43 SGSSLATTSFD-------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQ 110 (154)
Q Consensus 43 ~~~~l~~~~~d-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~ 110 (154)
+++.++.|+.+ ..+.+||+.+.+-...... +...... .++ ..++.+++.|+.+ ..+.+||+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM--STRRSGA--GVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC--SSCCBSC--EEE-EETTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC--ccccccc--cEE-EECCEEEEECCCCCCcccceEEEEeCCC
Confidence 56666666542 3477888876543322111 1111111 111 2267777888764 3688999886
Q ss_pred ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCC-----eEEEeeCC
Q 038702 111 RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGG-----QVYVWTSD 154 (154)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~ 154 (154)
.+-.. +...........++.. ++.+++.|+.++ .+.+||++
T Consensus 230 ~~W~~-~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 230 NAWRQ-VADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp TEEEE-ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCEee-CCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCC
Confidence 54322 1111111111222222 457777777553 47888763
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.59 E-value=1.9 Score=28.23 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=27.0
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccc
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFE 65 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~ 65 (154)
.-.....|+|.|+|+.+++--..|.|++++.....
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 34567899999999987777558999998865443
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.57 E-value=0.36 Score=31.50 Aligned_cols=108 Identities=10% Similarity=-0.037 Sum_probs=54.5
Q ss_pred CEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEE-ccCCeEEEecCCCccceeEEeCCCc-
Q 038702 45 SSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIG-NMTRTVEVISPAQRRSVATLQSPYI- 122 (154)
Q Consensus 45 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~- 122 (154)
..++.++.||.|.-.|..+++..-.+.... ....+..-......++..++.. +.||.|..++..+|.....+.....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN-FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG-SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc-cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 467888899999998988777664443321 0101110000000122334333 5799999999887754433331110
Q ss_pred CCcceEEE----e-cC---CCccEEEEEcCCCeEEEeeC
Q 038702 123 SAIPCRFH----A-HP---HQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 123 ~~~~~~~~----~-~~---~~~~~l~~~~~d~~i~~wd~ 153 (154)
...+.... . .+ ..+..+.+|+.+|++...|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~ 128 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINM 128 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEET
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEEC
Confidence 00001100 0 00 02356777888888877665
No 320
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.49 E-value=2.7 Score=29.83 Aligned_cols=115 Identities=9% Similarity=-0.054 Sum_probs=63.5
Q ss_pred CCeEEEEEcCC-CCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc--cCCeEEEecCC
Q 038702 33 RAVHSAYFSPS-GSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN--MTRTVEVISPA 109 (154)
Q Consensus 33 ~~v~~~~~~~~-~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~ 109 (154)
.....+++... +++..+-+..+.|.+.++.......+..... .....+++.|...+|+... ....|...++.
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l-----~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL-----EEPRAIVLDPMVGYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTC-----CSEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCC-----CCeeeEEEEcCCCcEEEecCCCCCEEEEEccC
Confidence 45678899874 4455555567889999887654433332111 1233567788644443333 23455555554
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeCC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD 154 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 154 (154)
|.....+.. ..-..+..+++++..+.++++-+..+.|...+++
T Consensus 467 -G~~~~~l~~-~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 467 -GSDRVVLVN-TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp -SCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred -CCccEEEEe-CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 332233321 2223446788887455555555666778777753
No 321
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.04 E-value=2.2 Score=30.26 Aligned_cols=69 Identities=12% Similarity=0.099 Sum_probs=46.7
Q ss_pred EEEcCCCcEEEEEc-cCCeEEEecCCCccc---------eeEE-eCCCcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 85 AIWGWDDSCIFIGN-MTRTVEVISPAQRRS---------VATL-QSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 85 ~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+..+|||++++.++ .+.++.++|.+.... ...+ .....+.-+...+|++ +++...+---|..|.-|++
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEEEEEEH
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeeecceEEEEec
Confidence 56799999887766 567899999873211 0111 1122233346789999 7777777778999999986
Q ss_pred C
Q 038702 154 D 154 (154)
Q Consensus 154 ~ 154 (154)
+
T Consensus 407 ~ 407 (638)
T 3sbq_A 407 E 407 (638)
T ss_dssp H
T ss_pred c
Confidence 3
No 322
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.86 E-value=0.93 Score=34.62 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=28.6
Q ss_pred EEEcCCCcEEEEEccCCeEEEecCCCccceeEEe
Q 038702 85 AIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQ 118 (154)
Q Consensus 85 ~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 118 (154)
++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3455678899999999999999999998887754
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.57 E-value=5.6 Score=31.77 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=73.6
Q ss_pred CCcEEEEEccCCCCCCCCCceee-cc----cCCeEEEEEcCCCCEEEEee-------CCCeEEEEeccccccceeEeecC
Q 038702 7 DGTACIWDLRSMATDKPEPTKVL-SH----KRAVHSAYFSPSGSSLATTS-------FDDTIGIWSGVNFENTAMIHHNN 74 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~-------~d~~v~~~~~~~~~~~~~~~~~~ 74 (154)
+..|.-|++..... +.+.+ .| ...|..-..+++.++++..+ ..|.+.+|..+......+-+|..
T Consensus 124 ~~aVyHW~~~~~s~----P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~ 199 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQ----PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA 199 (1630)
T ss_pred CCeEEEeccCCCCc----cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHh
Confidence 45688899865332 44333 33 34666777788888776433 35788888887665543333322
Q ss_pred CCCceEeEEEEEEcCCCc-EEEEEcc---CCeEEEecCCCc---cceeE-------EeCCCcCCcceEEEecCCCccEEE
Q 038702 75 QTGRWISSFRAIWGWDDS-CIFIGNM---TRTVEVISPAQR---RSVAT-------LQSPYISAIPCRFHAHPHQVGTLA 140 (154)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~l~~~~~---d~~i~i~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~ 140 (154)
.. ..+.+.-.+... .++.+.. .+.++|.++... .+... +........+..+..++ ....+.
T Consensus 200 ~F----~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy 274 (1630)
T 1xi4_A 200 SF----AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVF 274 (1630)
T ss_pred hh----heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEE
Confidence 10 001111111111 2222211 268888887532 11111 11111233345677777 445666
Q ss_pred EEcCCCeEEEeeCC
Q 038702 141 GATGGGQVYVWTSD 154 (154)
Q Consensus 141 ~~~~d~~i~~wd~~ 154 (154)
.-+.-|.|.++|+.
T Consensus 275 ~itk~G~~~~~d~~ 288 (1630)
T 1xi4_A 275 LITKYGYIHLYDLE 288 (1630)
T ss_pred EEecCceEEEEecc
Confidence 77888999999973
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.42 E-value=3.8 Score=29.56 Aligned_cols=70 Identities=9% Similarity=0.074 Sum_probs=38.7
Q ss_pred CCCCEEEEeeCCC--eEEEEeccccccceeEeec-CCCCceEeEEEEEEcCC-CcEEEEEcc--C-----CeEEEecCCC
Q 038702 42 PSGSSLATTSFDD--TIGIWSGVNFENTAMIHHN-NQTGRWISSFRAIWGWD-DSCIFIGNM--T-----RTVEVISPAQ 110 (154)
Q Consensus 42 ~~~~~l~~~~~d~--~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~--d-----~~i~i~~~~~ 110 (154)
.++..++.|+.++ .+.+||..+..-....... .+....... .+.+..+ +..++.|+. + +.+.+||+.+
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~-a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSA-GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSC-EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccccee-EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 4778888887654 6888988775432221100 011111111 1233444 677777775 2 4588999887
Q ss_pred cc
Q 038702 111 RR 112 (154)
Q Consensus 111 ~~ 112 (154)
.+
T Consensus 578 ~~ 579 (695)
T 2zwa_A 578 EN 579 (695)
T ss_dssp TC
T ss_pred Cc
Confidence 66
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.40 E-value=2.6 Score=27.57 Aligned_cols=64 Identities=9% Similarity=-0.101 Sum_probs=33.5
Q ss_pred CCeEEEEEcCC---CCEEEEeeC----C----CeEEEEeccccc-----cceeEe-ecCCCCceEeEEEEEEcCCCcEEE
Q 038702 33 RAVHSAYFSPS---GSSLATTSF----D----DTIGIWSGVNFE-----NTAMIH-HNNQTGRWISSFRAIWGWDDSCIF 95 (154)
Q Consensus 33 ~~v~~~~~~~~---~~~l~~~~~----d----~~v~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 95 (154)
.....|+++|+ +..|+.+.. + ..|..++..... ...++. ......+... .++|.|+|.+++
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~--~l~~~pDG~Lyv 150 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGG--RIRFGPDGMLYI 150 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCC--CEEECTTSCEEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCc--eEEECCCCcEEE
Confidence 46789999997 444444332 3 567777765431 111111 1111111112 467899998776
Q ss_pred EEc
Q 038702 96 IGN 98 (154)
Q Consensus 96 ~~~ 98 (154)
+-+
T Consensus 151 t~G 153 (354)
T 3a9g_A 151 TTG 153 (354)
T ss_dssp ECC
T ss_pred EEC
Confidence 643
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.10 E-value=4.5 Score=32.24 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=41.3
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccc-eeE-eecCCCCceEeEEEEEEcCCCcEEEEEc-------cCCe
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENT-AMI-HHNNQTGRWISSFRAIWGWDDSCIFIGN-------MTRT 102 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~d~~ 102 (154)
..+|.--+|-..... +-. .+..|.-|++.....+ ..+ .+..-.+ ...+....+++.++++..| -.|.
T Consensus 105 ~e~VvfWkWis~~~l-~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~--~QIinY~~d~~~kW~~l~gi~~~~~~v~G~ 180 (1630)
T 1xi4_A 105 TDDVTFWKWISLNTV-ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAG--CQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (1630)
T ss_pred CCCceEEEecCCCee-EEE-cCCeEEEeccCCCCccHHHHhcchhccc--CeeEEeeeCCCCCeEEEEeeccCCCcccce
Confidence 456777777544332 222 2356888998754333 222 2222222 2344455677777665433 3478
Q ss_pred EEEecCCCc
Q 038702 103 VEVISPAQR 111 (154)
Q Consensus 103 i~i~~~~~~ 111 (154)
+.+|..+.+
T Consensus 181 mQLyS~er~ 189 (1630)
T 1xi4_A 181 MQLYSVDRK 189 (1630)
T ss_pred eeeeecccc
Confidence 888887754
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=89.96 E-value=2.4 Score=26.57 Aligned_cols=103 Identities=9% Similarity=-0.025 Sum_probs=52.2
Q ss_pred CCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCcc
Q 038702 43 SGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRR 112 (154)
Q Consensus 43 ~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~ 112 (154)
++..++.|+.+ ..+.+||+.+.+-....... ....... ++ ..++++++.|+.+ ..+.+||+.+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ--TAREGAG--LV-VASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS--SCCBSCE--EE-EETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC--CCcccce--EE-EECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 56677777653 35788888765433322111 1111111 11 1267777777754 458889987654
Q ss_pred ceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 113 SVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
-...-..+. ......+... ++.+++.|+.+ ..+.+||+
T Consensus 187 W~~~~~~p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 187 WTNVTPMAT-KRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp EEEECCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred EEeCCCCCc-ccccceEEEE--CCEEEEEeCCCCCcccceEEEEeC
Confidence 322211111 1111222222 45777777754 35777776
No 328
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.88 E-value=4.4 Score=29.47 Aligned_cols=114 Identities=10% Similarity=0.016 Sum_probs=59.7
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCc
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQR 111 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~ 111 (154)
...|.++...+++++. .|+.++-+..++..+............... .+.++...+++.+.+ |+.++-+..++..++
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~--~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSN--SVLCSLKDSEGNLWF-GTYLGNISYYNTRLK 437 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCS--BEEEEEECTTSCEEE-EETTEEEEEECSSSC
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCc--ceEEEEECCCCCEEE-EeccCCEEEEcCCCC
Confidence 3568999988887755 445445578888765432221111111112 233445566666555 566667888888766
Q ss_pred cceeEEeCC-CcCCcceEEEecCCCccEEEEEcCCCeEEEeeC
Q 038702 112 RSVATLQSP-YISAIPCRFHAHPHQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 112 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd~ 153 (154)
+.. .+... .......++...+ ++.+.+ |+. +-|..+|.
T Consensus 438 ~~~-~~~~~~~~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~ 476 (781)
T 3v9f_A 438 KFQ-IIELEKNELLDVRVFYEDK-NKKIWI-GTH-AGVFVIDL 476 (781)
T ss_dssp EEE-ECCSTTTCCCCEEEEEECT-TSEEEE-EET-TEEEEEES
T ss_pred cEE-EeccCCCCCCeEEEEEECC-CCCEEE-EEC-CceEEEeC
Confidence 432 22211 1112224566665 444444 444 45777764
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.50 E-value=6.1 Score=30.56 Aligned_cols=112 Identities=11% Similarity=0.002 Sum_probs=60.2
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCC------CcEEEEEcc-CCeEEEe
Q 038702 34 AVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWD------DSCIFIGNM-TRTVEVI 106 (154)
Q Consensus 34 ~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~-d~~i~i~ 106 (154)
.|...+.+ +.+++.++ ++.+.++.+..++........ -...+.+ +.+.|. +.+++.|.. |++++|+
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~--l~~evsc--l~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTE--MEHEVAC--LDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEE--CSSCEEE--EECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccC--CCCceEE--EEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 45555543 33555554 567777777654322211111 1222333 344432 468999996 9999999
Q ss_pred cCCCccceeEEeCCCcCCcceEEEecC-CCccEEEEEcCCCeEEEeeC
Q 038702 107 SPAQRRSVATLQSPYISAIPCRFHAHP-HQVGTLAGATGGGQVYVWTS 153 (154)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~~wd~ 153 (154)
++.+.+.+....-.. ...+.++.... ....+|..|-.||.+..+.+
T Consensus 588 sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 588 KLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp ETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred ECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 998766554333211 11222222211 13457888888998765543
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.01 E-value=2.9 Score=26.26 Aligned_cols=65 Identities=9% Similarity=-0.050 Sum_probs=36.7
Q ss_pred CCCEEEEeeCC----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC------CeEEEecCCCcc
Q 038702 43 SGSSLATTSFD----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT------RTVEVISPAQRR 112 (154)
Q Consensus 43 ~~~~l~~~~~d----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------~~i~i~~~~~~~ 112 (154)
++..++.|+.+ ..+.+||+.+.+-....... ....-.. ++ ..++++++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP--TPRDSLA--AC-AAEGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS--SCCBSCE--EE-EETTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC--cccccee--EE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777754 56888888776433222111 1111111 11 2267777788765 458889988654
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.96 E-value=4.2 Score=27.98 Aligned_cols=133 Identities=8% Similarity=0.037 Sum_probs=74.8
Q ss_pred CCcEEEEEccCCCCCCCCCceeecccCCeEEEEEcCCC---CEEEEeeC---CCeEEEEecccc--cc-c---eeE---e
Q 038702 7 DGTACIWDLRSMATDKPEPTKVLSHKRAVHSAYFSPSG---SSLATTSF---DDTIGIWSGVNF--EN-T---AMI---H 71 (154)
Q Consensus 7 d~~v~vw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---d~~v~~~~~~~~--~~-~---~~~---~ 71 (154)
.|.+.+|..+.+. ...+.+|.+.-..+...-+. +.|..+.. .+.+++.++... .. . ... .
T Consensus 178 ~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~f 252 (494)
T 1bpo_A 178 VGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFF 252 (494)
T ss_dssp EEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCC
T ss_pred cceEEEeeccccc-----cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeC
Confidence 4667788876543 34445887665555553221 24444443 378999998654 11 1 011 1
Q ss_pred ecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEEcCCCeEE
Q 038702 72 HNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVY 149 (154)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 149 (154)
....... -...+..++.-..+..-+.-|.+++||++++.++..-+-....+. . -+.+...+ -++.....|.|.
T Consensus 253 ppe~~~D--FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF-~-t~~~~~~~-Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 253 PPEAQND--FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF-V-TAPHEATA-GIIGVNRKGQVL 325 (494)
T ss_dssp CTTSTTC--CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-E-EEEETTTT-EEEEEETTCEEE
T ss_pred CcccccC--ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceE-E-ecccCCCC-cEEEEccCceEE
Confidence 1111111 123456677777888888999999999999999887764333332 2 23333233 344444666654
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.52 E-value=3.2 Score=26.05 Aligned_cols=103 Identities=14% Similarity=-0.006 Sum_probs=50.6
Q ss_pred CCCEEEEeeCCC-----eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-------CeEEEecCCC
Q 038702 43 SGSSLATTSFDD-----TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-------RTVEVISPAQ 110 (154)
Q Consensus 43 ~~~~l~~~~~d~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~i~~~~~ 110 (154)
++..++.|+.++ .+.+||+.+.+-...... +...... .++ ..++++++.|+.+ ..+.+||+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM--NTRRSSV--GVG-VVGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC--SSCCBSC--EEE-EETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC--CCcccCc--eEE-EECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 566777776553 467788766543222111 1111111 111 1256777777643 3488899876
Q ss_pred ccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 111 RRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
.+-...-..+. ......++.. ++.+++.|+.+ ..+.+||+
T Consensus 183 ~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 183 NEWTYIAEMST-RRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp TEEEEECCCSS-CCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEET
T ss_pred CcEEECCCCcc-ccccccEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 54322111111 1111222222 45777777754 35777776
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.81 E-value=3.7 Score=26.01 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=34.3
Q ss_pred CCCEEEEeeC------CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCc
Q 038702 43 SGSSLATTSF------DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQR 111 (154)
Q Consensus 43 ~~~~l~~~~~------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~ 111 (154)
++..++.|+. -..+.+||+.+.+-...... +...... .++ ..++++++.|+.+ ..+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM--KTPRSMF--GVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC--SSCCBSC--EEE-EETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC--CCCcccc--eEE-EECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 5666676654 23588888876543222111 1111111 111 1256777777643 35778888765
Q ss_pred c
Q 038702 112 R 112 (154)
Q Consensus 112 ~ 112 (154)
+
T Consensus 233 ~ 233 (318)
T 2woz_A 233 K 233 (318)
T ss_dssp C
T ss_pred e
Confidence 4
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.62 E-value=3.8 Score=25.87 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=50.4
Q ss_pred CCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCcc
Q 038702 43 SGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRR 112 (154)
Q Consensus 43 ~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~ 112 (154)
++..++.|+.+ ..+.+||+.+.+-...... +....... ++. .++.+++.|+.+ ..+.+||+.+.+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM--LTRRIGVG--VAV-LNRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCC--SSCCBSCE--EEE-ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC--CccccceE--EEE-ECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 56677776643 3577888876543222111 11111111 111 267777777754 458888887654
Q ss_pred c--eeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 113 S--VATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 113 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
- +..+... .....++.. ++.+++.|+.+ ..+.+||+
T Consensus 196 W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 196 WRMITAMNTI---RSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp EEECCCCSSC---CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred EeeCCCCCCc---cccceEEEE--CCEEEEEeCCCCCCccceEEEEeC
Confidence 2 2222111 111122222 45677777654 45777776
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.55 E-value=3.8 Score=25.90 Aligned_cols=95 Identities=15% Similarity=0.041 Sum_probs=46.3
Q ss_pred CCCEEEEeeC-C-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCC-----eEEEecCCCc
Q 038702 43 SGSSLATTSF-D-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR-----TVEVISPAQR 111 (154)
Q Consensus 43 ~~~~l~~~~~-d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~ 111 (154)
+++.++.|+. + ..+.+||+.+.+-...... +....... ++ ..++++++.|+.++ .+.+||+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM--QTARSLFG--AT-VHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC--SSCCBSCE--EE-EETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC--CCchhceE--EE-EECCEEEEEeccCCCCccceEEEEECCCC
Confidence 5667777765 2 3588888876542221111 11111111 11 22677777777654 5888998765
Q ss_pred cceeEEeCCCcCCcceEEEecCCCccEEEEEcCC
Q 038702 112 RSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
+-...-..+. ......++.. ++.+++.|+.+
T Consensus 223 ~W~~~~~~p~-~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 223 KWAPFEAFPQ-ERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEEECCCSS-CCBSCEEEEE--TTEEEEEEEEE
T ss_pred eEEECCCCCC-cccceeEEEE--CCEEEEECCcc
Confidence 4322211111 1111222222 45677777753
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.07 E-value=6.4 Score=26.95 Aligned_cols=31 Identities=23% Similarity=0.130 Sum_probs=23.5
Q ss_pred cCCeEEEEEcCCCC-EEEEeeCCCeEEEEecc
Q 038702 32 KRAVHSAYFSPSGS-SLATTSFDDTIGIWSGV 62 (154)
Q Consensus 32 ~~~v~~~~~~~~~~-~l~~~~~d~~v~~~~~~ 62 (154)
-.....|+|.|++. .++.+...|.|++++..
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 34567999999996 45556688999999754
No 337
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=85.15 E-value=1.2 Score=32.25 Aligned_cols=31 Identities=0% Similarity=0.069 Sum_probs=26.7
Q ss_pred CCCcEEEEEccCCeEEEecCCCccceeEEeC
Q 038702 89 WDDSCIFIGNMTRTVEVISPAQRRSVATLQS 119 (154)
Q Consensus 89 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 119 (154)
.+..++++-+.|.++|+|++++++++.+..-
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3578999999999999999999998877654
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.01 E-value=7.1 Score=26.57 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=34.4
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccce--eEEeCC-----CcCCcceEEEecCC---CccEEEEE
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV--ATLQSP-----YISAIPCRFHAHPH---QVGTLAGA 142 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~---~~~~l~~~ 142 (154)
..++|.|+|+++++-...+.|++++..+++.. ..+... .... ...++++|+ ++.+.++-
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~G-llgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNG-LLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCS-EEEEEECTTTTTSCEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCc-eeEEEECCCcCcCCEEEEEE
Confidence 46789999998877655557888876555432 222110 1122 257899984 44444444
No 339
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.56 E-value=6.4 Score=25.63 Aligned_cols=68 Identities=15% Similarity=0.046 Sum_probs=38.1
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccc--eeEEeC-CCcCCcceEEEecCC---CccEEEEEcCC-----CeEEEe
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRS--VATLQS-PYISAIPCRFHAHPH---QVGTLAGATGG-----GQVYVW 151 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~~~~d-----~~i~~w 151 (154)
..++|.|+|+++++ ..++.|++++ .++. +..+.. .........++++|+ ++.++++-... ..|..+
T Consensus 34 ~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 34 WALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 36789999986655 4568999888 3332 221110 111223468899983 24555544432 556666
Q ss_pred eC
Q 038702 152 TS 153 (154)
Q Consensus 152 d~ 153 (154)
++
T Consensus 111 ~~ 112 (352)
T 2ism_A 111 RH 112 (352)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.34 E-value=5.8 Score=25.00 Aligned_cols=103 Identities=12% Similarity=-0.023 Sum_probs=51.8
Q ss_pred CCCEEEEeeCC-----CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC-----CeEEEecCCCcc
Q 038702 43 SGSSLATTSFD-----DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT-----RTVEVISPAQRR 112 (154)
Q Consensus 43 ~~~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~ 112 (154)
++..++.|+.+ ..+.+||+.+.+-...... +...... .++. -++.+++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~--~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM--NTIRSGA--GVCV-LHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC--SSCCBSC--EEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC--CCccccc--eEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 56677777654 4578888876543222111 1111111 1111 267777787764 458899987654
Q ss_pred ceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 113 SVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
-.. +...........++.. ++.+++.|+.+ ..+.+||+
T Consensus 243 W~~-~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 243 WTF-VAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp EEE-CCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred EEE-CCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence 221 1111111111222222 45777777743 35777776
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.01 E-value=6.8 Score=24.79 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=49.3
Q ss_pred CCCEEEEeeCC-------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC------CeEEEecCC
Q 038702 43 SGSSLATTSFD-------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT------RTVEVISPA 109 (154)
Q Consensus 43 ~~~~l~~~~~d-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------~~i~i~~~~ 109 (154)
++..++.|+.+ ..+.+||+.+.+-...... +....-. .++ ..++.+++.|+.+ ..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL--PIKVYGH--NVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC--SSCEESC--EEE-EETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC--CCccccc--EEE-EECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 56666777653 3477788776543222111 1111111 112 2367777777642 358899988
Q ss_pred CccceeEEeCCCcCCcceEEEecCCCccEEEEEcCC-----CeEEEeeC
Q 038702 110 QRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGG-----GQVYVWTS 153 (154)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 153 (154)
+.+-...-..+. ......++.. ++.+++.|+.+ ..+.+||+
T Consensus 184 ~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 184 KGDWKDLAPMKT-PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp TTEEEEECCCSS-CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEET
T ss_pred CCEEEECCCCCC-CcccceEEEE--CCEEEEEcCcCCCCccceEEEEEC
Confidence 654222111111 1111122222 45677777643 24566765
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.67 E-value=7.5 Score=25.02 Aligned_cols=54 Identities=7% Similarity=0.097 Sum_probs=27.1
Q ss_pred CCCEEEEeeC-C---------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccC
Q 038702 43 SGSSLATTSF-D---------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMT 100 (154)
Q Consensus 43 ~~~~l~~~~~-d---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 100 (154)
++..++.|+. + ..+.+||+.+.+-....... +....-. .++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~--~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGH--VTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSE--EEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-Ccccccc--eEEE-ECCEEEEEeCcC
Confidence 5666777665 2 35788888765432221111 1111111 1122 467888888754
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.23 E-value=1.4 Score=33.65 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=29.3
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeE
Q 038702 34 AVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 34 ~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~ 70 (154)
.+.++...++..++++-+.|+++|+|++.++......
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455566677889999999999999999988765443
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.93 E-value=7.6 Score=24.54 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=50.2
Q ss_pred CCCEEEEeeCC--------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc-C-----CeEEEecC
Q 038702 43 SGSSLATTSFD--------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM-T-----RTVEVISP 108 (154)
Q Consensus 43 ~~~~l~~~~~d--------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d-----~~i~i~~~ 108 (154)
++..++.|+.+ ..+.+||..+.+-...... +....-. .++ ..++++++.|+. + ..+.+||+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~--~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL--PYVVYGH--TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC--SSCCBSC--EEE-EETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC--CCcccce--eEE-EECCEEEEEeCCCCCCcccceEEEEeC
Confidence 56666666632 3588888876542221111 1111111 111 236677777776 2 35888988
Q ss_pred CCccc--eeEEeCCCcCCcceEEEecCCCccEEEEEcCCC-----eEEEeeC
Q 038702 109 AQRRS--VATLQSPYISAIPCRFHAHPHQVGTLAGATGGG-----QVYVWTS 153 (154)
Q Consensus 109 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~~wd~ 153 (154)
.+.+- +..+.. ......++.. ++.+++.|+.++ .+.+||+
T Consensus 173 ~~~~W~~~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 173 KKFEWKELAPMQT---ARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp TTTEEEECCCCSS---CCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEET
T ss_pred CCCeEEECCCCCC---chhceEEEEE--CCEEEEEeccCCCCccceEEEEEC
Confidence 76532 222221 1111222222 457777777543 4677775
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.97 E-value=13 Score=26.81 Aligned_cols=107 Identities=10% Similarity=0.020 Sum_probs=54.1
Q ss_pred CCCEEEEeeCCC------eEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCC--eEEEecCCCccce
Q 038702 43 SGSSLATTSFDD------TIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR--TVEVISPAQRRSV 114 (154)
Q Consensus 43 ~~~~l~~~~~d~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~~~ 114 (154)
++..++.|+.++ .+.+||..+..-...... +....-. .++.-.++.+++.|+.++ .+.+||..+.+-.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~--p~~R~~h--~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL--SHTRFRH--SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC--SBCCBSC--EEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC--CCCcccc--eEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 667777776532 477788776432221111 1111111 222224788888888655 6889998865422
Q ss_pred eEEe---CCCcCCcceEEEecCCCccEEEEEcC--C-----CeEEEeeC
Q 038702 115 ATLQ---SPYISAIPCRFHAHPHQVGTLAGATG--G-----GQVYVWTS 153 (154)
Q Consensus 115 ~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--d-----~~i~~wd~ 153 (154)
..-. .+........+.+....+.+++.|+. + ..+..||+
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence 1110 01111111224445423567777765 2 35777775
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.27 E-value=5.6 Score=29.03 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=27.2
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeE
Q 038702 34 AVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMI 70 (154)
Q Consensus 34 ~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~ 70 (154)
.|.++.+ +..++++-+.|.++|+|++.+.......
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4555554 4779999999999999999998765443
No 347
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=77.84 E-value=11 Score=24.09 Aligned_cols=111 Identities=15% Similarity=0.072 Sum_probs=55.0
Q ss_pred cccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC
Q 038702 30 SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA 109 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~ 109 (154)
.+...+..+.+.|++..++.+...+..+-.|-. +..-..... .... ....+.+.+++..++. +.+|.+++.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~--~~~~--~~~~~~~~~~g~~~~~-~~~G~~~~s~~D 233 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNR--TTSR--RLHNMGFTPDGRLWMI-VNGGKIAFSDPD 233 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEEC--CSSS--CEEEEEECTTSCEEEE-ETTTEEEEEETT
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCC--CCCC--ccceeEECCCCCEEEE-eCCceEEEecCC
Confidence 345578899999988877766544434333321 111111111 1111 2235567888876654 457777776322
Q ss_pred CccceeEEeCC--CcCCcceEEEecCCCccEEEEEcCCCeE
Q 038702 110 QRRSVATLQSP--YISAIPCRFHAHPHQVGTLAGATGGGQV 148 (154)
Q Consensus 110 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i 148 (154)
.++....+... ........+.+.+ ++.+++.+. ++.+
T Consensus 234 ~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 234 NSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL 272 (327)
T ss_dssp EEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE
T ss_pred CCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE
Confidence 23322222211 0111124667776 556666554 5555
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=77.53 E-value=12 Score=24.34 Aligned_cols=15 Identities=7% Similarity=0.018 Sum_probs=10.8
Q ss_pred EEEEcCCCcEEEEEc
Q 038702 84 RAIWGWDDSCIFIGN 98 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~ 98 (154)
.++|.|+|.++++-+
T Consensus 134 ~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 134 RLVFDGKGYLFIALG 148 (353)
T ss_dssp CEEECSSSEEEEEEC
T ss_pred cEEECCCCcEEEEEC
Confidence 467999997666654
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.68 E-value=22 Score=25.39 Aligned_cols=57 Identities=11% Similarity=-0.001 Sum_probs=37.5
Q ss_pred EEEEcCCCcEEEEEccC------------CeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEE
Q 038702 84 RAIWGWDDSCIFIGNMT------------RTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGA 142 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 142 (154)
.+.|+|.|.+++.-..+ ..+.+.+..+++....+.++...- .+.++|+| +++.|...
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE-~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCE-VTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCE-EEEEEECT-TSSEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCcc-CcCeeECC-CCCEEEEE
Confidence 46789999877664322 246666777888777676664444 47889999 55555443
No 350
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=73.48 E-value=9.1 Score=26.55 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=24.2
Q ss_pred cccCCeEEEEEcCCCCEEEEeeCCCeEEE
Q 038702 30 SHKRAVHSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
....+|..|.++++...|+.++.++-+++
T Consensus 459 ~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 459 REPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 34678999999999999999988886654
No 351
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=67.21 E-value=22 Score=22.76 Aligned_cols=115 Identities=10% Similarity=0.030 Sum_probs=57.7
Q ss_pred ccCCeEEEEEcCCCCEEEEeeCCCeEEEEeccccccceeEeec-CCCCceEeEEEEEEcCCCcEEEEEccCCeEEEecCC
Q 038702 31 HKRAVHSAYFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHN-NQTGRWISSFRAIWGWDDSCIFIGNMTRTVEVISPA 109 (154)
Q Consensus 31 ~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~ 109 (154)
....+..+.+.++++.++ ++.+|.+...+...++.-...... ..... ....+.+.+++..++.+. ++.+. +...
T Consensus 203 ~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~-~g~i~-~S~D 277 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSV--GFLDLAYRTPNEVWLAGG-AGALL-CSQD 277 (327)
T ss_dssp SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCS--CEEEEEESSSSCEEEEES-TTCEE-EESS
T ss_pred CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCc--ceEEEEecCCCEEEEEeC-CCeEE-EeCC
Confidence 455788899988887554 456777766532212111111111 01111 234566788777766655 56553 3333
Q ss_pred CccceeEEeCC-CcCCcceEEEecCCCccEEEEEcCCCeEEEee
Q 038702 110 QRRSVATLQSP-YISAIPCRFHAHPHQVGTLAGATGGGQVYVWT 152 (154)
Q Consensus 110 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~wd 152 (154)
.++.-..+... ........+.+.+ + ..++.++.+|.|.-++
T Consensus 278 gG~tW~~~~~~~~~~~~~~~v~~~~-~-~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 278 GGQTWQQDVDVKKVPSNFYKILFFS-P-DQGFILGQKGILLRYV 319 (327)
T ss_dssp TTSSCEECGGGTTSSSCCCEEEEEE-T-TEEEEECSTTEEEEEC
T ss_pred CCcccEEcCccCCCCCCeEEEEEEC-C-CceEEEcCCceEEEEc
Confidence 34433333311 0011114556654 3 3466667788887665
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.17 E-value=32 Score=24.62 Aligned_cols=58 Identities=16% Similarity=0.081 Sum_probs=34.3
Q ss_pred EEEEEcCCCCEEEEeeCC------------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEE
Q 038702 36 HSAYFSPSGSSLATTSFD------------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIG 97 (154)
Q Consensus 36 ~~~~~~~~~~~l~~~~~d------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (154)
=.|.|+|.|++++.-..+ ..+.+.+..+++...+.... .+.. ...++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P--~gaE--~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCE--VTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC--TTCE--EEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC--CCcc--CcCeeECCCCCEEEEE
Confidence 468999999977764432 23445555555544433322 2222 2356899999887765
No 353
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=66.78 E-value=8.6 Score=27.35 Aligned_cols=57 Identities=9% Similarity=-0.011 Sum_probs=34.5
Q ss_pred eeecCCCcEEEEEccCCCCCC-CCC---ceeecccCCeEEEEEcCCCCEEEEeeCCCeEEE
Q 038702 2 ATSSTDGTACIWDLRSMATDK-PEP---TKVLSHKRAVHSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~-~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
..|..+|.|+-.-........ ... ...+....+|..+.++++...|+.++.++.+++
T Consensus 384 FLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 384 YLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 357778887643332211100 001 111235678999999999999999888876665
No 354
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=64.79 E-value=9.6 Score=27.52 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=33.7
Q ss_pred eeecCCCcEEEE-EccCCCCCCCCCceeecccCCeEEEEEcCCC--CEEEEeeCCCeEEE
Q 038702 2 ATSSTDGTACIW-DLRSMATDKPEPTKVLSHKRAVHSAYFSPSG--SSLATTSFDDTIGI 58 (154)
Q Consensus 2 ~~~~~d~~v~vw-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~~ 58 (154)
..|..+|.|+-. ....... .......+....+|..|.++++. ..|+.++.++-+++
T Consensus 419 flGT~~G~l~Kvv~~~~~~~-~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 419 FVSTDRGALHKAISLEHAVH-IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEETTSEEEEEEECSSSEE-EEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEcCCcEEEEEEecCCCce-EEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 356777776433 3322111 00011122456789999999987 88999888886665
No 355
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=63.98 E-value=11 Score=27.38 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=24.9
Q ss_pred cccCCeEEEEEcCCCCEEEEeeCCCeEEE
Q 038702 30 SHKRAVHSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 30 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
....+|..|.++++.+.|+.++.++-+++
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 46778999999999999999998886665
No 356
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=60.89 E-value=32 Score=22.58 Aligned_cols=51 Identities=8% Similarity=-0.025 Sum_probs=31.9
Q ss_pred EEEEEcCCCcEEEEEccCCeEEEecCCCccce--eEEeC--CCcCCcceEEEecC
Q 038702 83 FRAIWGWDDSCIFIGNMTRTVEVISPAQRRSV--ATLQS--PYISAIPCRFHAHP 133 (154)
Q Consensus 83 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~ 133 (154)
..++|.|++.++++--..|.|++++...++.. ..+.. .....-...++++|
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~P 89 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSP 89 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECT
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecc
Confidence 46789999998877766899999886655432 11110 01112236789988
No 357
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=59.80 E-value=31 Score=22.00 Aligned_cols=61 Identities=7% Similarity=-0.021 Sum_probs=34.0
Q ss_pred EEcCCCCEEEEeeCC--------------CeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc--cCC-
Q 038702 39 YFSPSGSSLATTSFD--------------DTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN--MTR- 101 (154)
Q Consensus 39 ~~~~~~~~l~~~~~d--------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~- 101 (154)
-+++++.+++-.... ..|+..++...+...+... . ...+++++.+|+... .++
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-~---------~~~~s~~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-P---------CIYASLIGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-C---------EEEEEEETTEEEEEEESSSSC
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-C---------ccEEEEeCCEEEEEeecCCCC
Confidence 457888888777553 3466666665543332211 1 124677888877665 233
Q ss_pred -eEEEecCC
Q 038702 102 -TVEVISPA 109 (154)
Q Consensus 102 -~i~i~~~~ 109 (154)
.|+..++.
T Consensus 129 ~~Iy~~~~d 137 (302)
T 3s25_A 129 TSLYRIRID 137 (302)
T ss_dssp EEEEEEETT
T ss_pred ceEEEEECC
Confidence 45555554
No 358
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=58.91 E-value=31 Score=24.29 Aligned_cols=56 Identities=11% Similarity=0.006 Sum_probs=35.2
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCceee-cccCCe-EEEEEcCCCCEEEEeeCCCeEEE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTKVL-SHKRAV-HSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
..|..+|.|+-.-+...... .....+. ....+| ..+.++++...|+.++..+.+++
T Consensus 404 FlGT~~G~l~Kv~~~~~~~~-~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 404 FLGDSQGQLHRVYLGPGSDG-HPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEETTSEEEEEECSSSCCS-CCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEECCCCeEEEEEEcCCCCe-eEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45788898775444322111 1112221 455678 48999999999999988887665
No 359
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=56.64 E-value=8 Score=27.14 Aligned_cols=57 Identities=12% Similarity=0.019 Sum_probs=34.3
Q ss_pred eeecCCCcEEEEEccCCCCC--CCCCceeecccCCeE-EEEEcCCCCEEEEeeCCCeEEE
Q 038702 2 ATSSTDGTACIWDLRSMATD--KPEPTKVLSHKRAVH-SAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~--~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
..|..+|.|+-..+...... ......+.....+|. .|.++++...|+.++.++-+++
T Consensus 417 flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 417 FVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45778888765555432110 000111223356785 8999999999999988775554
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=54.27 E-value=40 Score=21.52 Aligned_cols=65 Identities=6% Similarity=0.033 Sum_probs=36.9
Q ss_pred EEEcCCCCEEEEeeC-CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEccCC--eEEEecCCCc
Q 038702 38 AYFSPSGSSLATTSF-DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNMTR--TVEVISPAQR 111 (154)
Q Consensus 38 ~~~~~~~~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~ 111 (154)
..++++++.|+-.+. ...|...++.......+.. . . .. . .+.|++.+|+.....+ .|..-++...
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~--~--~~--~-~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--C--N--CY--K-PVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--S--C--EE--E-EEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--C--C--cc--c-eeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 356778887775554 5678777876655443322 1 1 11 1 2458888777665443 5555555543
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.91 E-value=78 Score=22.77 Aligned_cols=57 Identities=11% Similarity=0.017 Sum_probs=35.3
Q ss_pred EEEEcCCCcEEEEEcc------------CCeEEEecCCCccceeEEeCCCcCCcceEEEecCCCccEEEEE
Q 038702 84 RAIWGWDDSCIFIGNM------------TRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGA 142 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 142 (154)
.+.|.++|.+.+.... ...+..++..+++....+..+. ..-.+.++|+| ++..|...
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECT-TSSEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-CccccCCEECC-CCCEEEEE
Confidence 4678999987773221 1256677777777655554332 23347899999 55555443
No 362
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=43.81 E-value=62 Score=20.73 Aligned_cols=96 Identities=7% Similarity=-0.029 Sum_probs=45.5
Q ss_pred CCCEEEEeeC-CCeEEEEeccccc-cceeEeecCCCCceEeEEEEEEcCCCcEEEEEcc-C---------CeEEEecCCC
Q 038702 43 SGSSLATTSF-DDTIGIWSGVNFE-NTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGNM-T---------RTVEVISPAQ 110 (154)
Q Consensus 43 ~~~~l~~~~~-d~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d---------~~i~i~~~~~ 110 (154)
++..++.|+. ...+.++|+.+.. .-............-.. ++ .-++.+++.|+. + ..+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~--~~-~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQAT--SA-FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCE--EE-EETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccce--EE-EECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5666666654 4568888886421 11111111101111111 11 125777777776 2 3588898876
Q ss_pred ccc--eeEEeCCCcCCcceEEEecCCCccEEEEEcCC
Q 038702 111 RRS--VATLQSPYISAIPCRFHAHPHQVGTLAGATGG 145 (154)
Q Consensus 111 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 145 (154)
.+- +..+. + .......++.. ++.+++.|+.+
T Consensus 96 ~~W~~~~~~~-p-~~r~~~~~~~~--~~~iyv~GG~~ 128 (357)
T 2uvk_A 96 NSWVKLMSHA-P-MGMAGHVTFVH--NGKAYVTGGVN 128 (357)
T ss_dssp TEEEECSCCC-S-SCCSSEEEEEE--TTEEEEEECCC
T ss_pred CcEEECCCCC-C-cccccceEEEE--CCEEEEEeCcC
Confidence 542 22221 0 11111222222 56788888764
No 363
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=39.27 E-value=1e+02 Score=22.06 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=23.0
Q ss_pred cCCeEEEEEcCCCCEEEEeeCCCeEEE
Q 038702 32 KRAVHSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 32 ~~~v~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
..+|..|.+++....|+.++.++.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 468889999999999999988887765
No 364
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=35.02 E-value=77 Score=23.24 Aligned_cols=57 Identities=11% Similarity=0.001 Sum_probs=34.8
Q ss_pred eeecCCCcEEEEEccCCCCCCCCCce--eecccCCe-EEEEEcCCCCEEEEeeCCCeEEE
Q 038702 2 ATSSTDGTACIWDLRSMATDKPEPTK--VLSHKRAV-HSAYFSPSGSSLATTSFDDTIGI 58 (154)
Q Consensus 2 ~~~~~d~~v~vw~~~~~~~~~~~~~~--~~~~~~~v-~~~~~~~~~~~l~~~~~d~~v~~ 58 (154)
..|..+|.|+-.-+............ ......+| ..+.++++...|+.++.++.+++
T Consensus 416 FLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 416 FVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 45788898875444332110000111 12345676 68999998889999888877666
No 365
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=34.40 E-value=10 Score=25.85 Aligned_cols=19 Identities=11% Similarity=-0.003 Sum_probs=13.0
Q ss_pred EEccCCeEEEecCCCccce
Q 038702 96 IGNMTRTVEVISPAQRRSV 114 (154)
Q Consensus 96 ~~~~d~~i~i~~~~~~~~~ 114 (154)
.+..+|.||+||++..+.+
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 5667899999999987654
No 366
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=28.79 E-value=1.4e+02 Score=20.53 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=29.0
Q ss_pred ecCCCcEEEEEccCCCCCCCCCceee---cccCCeEEEEEcCCCCEEEEeeCCCeEEEEecc
Q 038702 4 SSTDGTACIWDLRSMATDKPEPTKVL---SHKRAVHSAYFSPSGSSLATTSFDDTIGIWSGV 62 (154)
Q Consensus 4 ~~~d~~v~vw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~~~~~~ 62 (154)
.+-+|.|+.|+--..... ..+.. .....+..+.= .++.-++.+...|++....++
T Consensus 114 VsptG~VryWesIs~~~~---~~ei~~~L~~~E~vt~l~n-~epaGfIlaTStgrl~~lsir 171 (450)
T 1xks_A 114 ATREGSIRYWPSLAGEDT---YTEAFVDSGGDKTYSFLTA-VQGGSFILSSSGSQLIRLIPE 171 (450)
T ss_dssp ECTTCEEEEESCTTCTTC---CEEEECC----CCEEEEEE-ETTTEEEEEETTCCEEEEEEC
T ss_pred EcCCccEEEccccCCCCc---eEEEEecCCCCceEEEEee-cCCceEEEEeccceEEEEEec
Confidence 344899999985543221 22222 22244555433 334555556666777766766
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=25.74 E-value=1.5e+02 Score=19.84 Aligned_cols=106 Identities=7% Similarity=0.046 Sum_probs=57.5
Q ss_pred CCeEEEEEcCC----CCEEEEeeCCCeEEEEeccc-----cc---cceeEeecCCCCceEeEEEEEEc-CCCcEEEEEcc
Q 038702 33 RAVHSAYFSPS----GSSLATTSFDDTIGIWSGVN-----FE---NTAMIHHNNQTGRWISSFRAIWG-WDDSCIFIGNM 99 (154)
Q Consensus 33 ~~v~~~~~~~~----~~~l~~~~~d~~v~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ 99 (154)
..|..|+++|+ ++.|+.....+ -++|.+.+ .. .....+.....+ .....+.. .+|.++++--.
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s---~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYN---DAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTC---CEEEEEECTTTCEEEEEESS
T ss_pred cCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCC---CcceEEEeCCCCeEEEEecc
Confidence 57889999997 67777665544 23343332 11 112222221111 22234565 56777777788
Q ss_pred CCeEEEecCCC-c---cceeEEeCCCcCCcceEEEecCCCccEEEEEc
Q 038702 100 TRTVEVISPAQ-R---RSVATLQSPYISAIPCRFHAHPHQVGTLAGAT 143 (154)
Q Consensus 100 d~~i~i~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 143 (154)
.+.|..|+... . +....+.....-..+..+...+ ++.+.+..+
T Consensus 296 ~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn 342 (381)
T 3q6k_A 296 TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSN 342 (381)
T ss_dssp SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEEC
T ss_pred CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEEC
Confidence 88999999875 1 2333433222333445666665 555555443
No 368
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.43 E-value=2e+02 Score=20.37 Aligned_cols=71 Identities=7% Similarity=-0.043 Sum_probs=39.8
Q ss_pred CeEEEEEcCCC--CEEEEeeCCCeEEEEeccccccc-eeEe--ecCCCCceEeEEEEEEcCCCcEEEEEccCCeEEE
Q 038702 34 AVHSAYFSPSG--SSLATTSFDDTIGIWSGVNFENT-AMIH--HNNQTGRWISSFRAIWGWDDSCIFIGNMTRTVEV 105 (154)
Q Consensus 34 ~v~~~~~~~~~--~~l~~~~~d~~v~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 105 (154)
..++++....+ ..+..|+.+|.|+-..+...... ..+. .....+..+. ..+.++++..+|+.++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~-~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPIL-RDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCC-SCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccc-cceEEccCCCeEEEEecccccee
Confidence 46666665533 35667888998766555432211 1111 1111122221 03467888899999988877665
No 369
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=23.14 E-value=1.9e+02 Score=19.93 Aligned_cols=17 Identities=18% Similarity=0.100 Sum_probs=12.7
Q ss_pred EEEEcCCCcEEEEEccC
Q 038702 84 RAIWGWDDSCIFIGNMT 100 (154)
Q Consensus 84 ~~~~~~~~~~l~~~~~d 100 (154)
.++|.|||.+.++.+..
T Consensus 143 ~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 143 QLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EEEECTTSCEEEEECCT
T ss_pred cEeECCCCcEEEEeCCC
Confidence 57899999877766543
No 370
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.81 E-value=94 Score=18.51 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=24.0
Q ss_pred cCCeEEEEEcCCC-CEEEEeeCCCeEEEEeccccc
Q 038702 32 KRAVHSAYFSPSG-SSLATTSFDDTIGIWSGVNFE 65 (154)
Q Consensus 32 ~~~v~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~ 65 (154)
...+.++.|...+ ..+++.+.++++.++|..-++
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 4456667776643 356677788999999987654
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.54 E-value=2.2e+02 Score=20.58 Aligned_cols=62 Identities=13% Similarity=0.073 Sum_probs=36.3
Q ss_pred CCeEEEEEcCCCCEEEEeeC------------CCeEEEEeccccccceeEeecCCCCceEeEEEEEEcCCCcEEEEEc
Q 038702 33 RAVHSAYFSPSGSSLATTSF------------DDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN 98 (154)
Q Consensus 33 ~~v~~~~~~~~~~~l~~~~~------------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (154)
.....|.|+++|.+.+.... ...+..++..+++...+... +... ....++|+||++.|+..-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P~~a--EpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGC--EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--CTTC--EEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--CCCc--cccCCEECCCCCEEEEEE
Confidence 34567999999988774321 12455556555554443321 1111 233578999999887753
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.38 E-value=84 Score=23.07 Aligned_cols=29 Identities=7% Similarity=-0.175 Sum_probs=21.4
Q ss_pred EEcCCCcEEEEEc-----cCCeEEEecCCCccce
Q 038702 86 IWGWDDSCIFIGN-----MTRTVEVISPAQRRSV 114 (154)
Q Consensus 86 ~~~~~~~~l~~~~-----~d~~i~i~~~~~~~~~ 114 (154)
+++|++++++.+- .-..++++|+.+++.+
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 4789988776642 2236999999998765
Done!