Query 038704
Match_columns 237
No_of_seqs 126 out of 1401
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:24:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.9 2E-23 6.8E-28 182.5 4.9 202 3-224 101-360 (367)
2 2x4k_A 4-oxalocrotonate tautom 26.2 91 0.0031 18.4 4.0 36 160-202 5-40 (63)
3 1otf_A 4-oxalocrotonate tautom 25.4 1.1E+02 0.0038 18.1 4.4 23 180-202 15-37 (62)
4 2opa_A Probable tautomerase YW 25.0 1.1E+02 0.0039 18.0 4.4 36 160-202 2-37 (61)
5 3m20_A 4-oxalocrotonate tautom 23.6 1E+02 0.0035 18.7 3.9 23 180-202 14-36 (62)
6 3abf_A 4-oxalocrotonate tautom 22.2 94 0.0032 18.6 3.5 36 160-202 3-38 (64)
7 3ry0_A Putative tautomerase; o 22.1 1.4E+02 0.0048 18.1 4.4 36 160-202 2-37 (65)
8 3m21_A Probable tautomerase HP 20.7 1.5E+02 0.0052 18.1 4.3 23 180-202 18-40 (67)
9 2kwl_A ACP, acyl carrier prote 19.1 1.9E+02 0.0064 18.3 5.4 32 178-209 4-35 (84)
10 3mb2_A 4-oxalocrotonate tautom 18.9 1.2E+02 0.0041 19.0 3.5 36 160-202 3-38 (72)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.87 E-value=2e-23 Score=182.46 Aligned_cols=202 Identities=12% Similarity=0.081 Sum_probs=131.1
Q ss_pred hHHHHHHHcCeEEEEEc-------cCCCCCCCCCCCeEEEeCCCCCCcHHHHHhhhcC-------CccEEEcc-c---cc
Q 038704 3 AIPYMSRIFGGKIIVKG-------KPPPPVSGSSTGVLFVCTHRTLMDPVVLSTVLRR-------KIPAVTYS-I---SR 64 (237)
Q Consensus 3 ~~~~~l~~lG~~v~v~g-------~e~~~~~~~~~~~iivaNH~S~lD~~~l~~~~~~-------~~~~v~k~-~---~~ 64 (237)
|.+.+++..|.+ +.| .|+++ .++++|++|||+|.+|++++..++++ ++.||+|. + |.
T Consensus 101 ~ir~li~~~~s~--V~G~e~~~~~~E~l~---~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~Pl 175 (367)
T 1iuq_A 101 YIRPLIDFGNSF--VGNLSLFKDIEEKLQ---QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPL 175 (367)
T ss_dssp HHGGGBCGGGCE--EECHHHHHHHHHHHH---TTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTT
T ss_pred HHHHHHhhcCCE--eecchhhhhHHhhcc---CCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcCcc
Confidence 334444444555 788 66664 46899999999999999999999965 78999987 4 32
Q ss_pred hhhh--hccCCceEE----e------cCCh----hhHHHHHHHHhC-CC-EEEecCCcccCC----Cc--ccccc-hhh-
Q 038704 65 LSEI--LSPIPTVRL----T------RIRD----VDAEKIKRELSN-GD-LVVCPEGTTCRE----PF--LLRFS-ALF- 118 (237)
Q Consensus 65 ~~~~--~~~~~~i~v----~------R~~~----~~~~~~~~~L~~-g~-v~IFPEGtrt~~----~~--l~~F~-~~~- 118 (237)
...+ .+.++|++. + |.+. +.++++++.|++ |. ++|||||||+++ +. ..+|+ +++
T Consensus 176 ~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~ 255 (367)
T 1iuq_A 176 CKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVD 255 (367)
T ss_dssp THHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHH
T ss_pred ccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccchhhh
Confidence 2222 133446664 4 4322 223456788888 56 999999999975 33 44598 444
Q ss_pred ---hh---cCCc--eEEEEEEeecccccccccCcCCCcchhh--hccCCCcEEEEEEecccCCccccCCCC----CHHHH
Q 038704 119 ---AE---LTDR--IVPVAMNYRVGFFHATTARGWKGLDPMF--FFMNPRPVYEVTFLNQLPVEATCSSGK----SPHDV 184 (237)
Q Consensus 119 ---~~---~~~p--VvPV~I~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~~l~pi~~~~~~~~~~----~~~e~ 184 (237)
.. .++| |+||+|.+. ..+.+... .-.... ++. .++.+.|.+++||+++++...++ ..+++
T Consensus 256 ~~~~LA~ksg~P~hIvPvaI~t~-~imppp~~----ve~~~g~~r~i-~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l 329 (367)
T 1iuq_A 256 NMRRLIQHSDVPGHLFPLALLCH-DIMPPPSQ----VEIEIGEKRVI-AFNGAGLSVAPEISFEEIAATHKNPEEVREAY 329 (367)
T ss_dssp HHHHHHHTSSSCEEEEEEEEECG-GGSCCC--------------CCC-CCBCCEEEECCCCCHHHHHHTSSSHHHHHHHH
T ss_pred HHHHHHHHcCCCceEEEEEEEec-cccCCccc----cccccccccee-ecccEEEEECCccchhhccccccchHHHHHHH
Confidence 22 2789 999999944 33222100 000000 112 33578999999999876531222 24569
Q ss_pred HHHHHHHHHHHhCCCcCccchHHHHHHhhcCCCcccchhh
Q 038704 185 ANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYTSF 224 (237)
Q Consensus 185 a~~v~~~i~~~l~~~~~~~~~~dk~~~~~~~~~~~~~~~~ 224 (237)
++.+++.|++.+ +.-...+.|+.|+..||..
T Consensus 330 ~e~v~~~I~~~y---------~~l~~~i~~~~~~~~~~~~ 360 (367)
T 1iuq_A 330 SKALFDSVAMQY---------NVLKTAISGKQGLGASTAD 360 (367)
T ss_dssp HHHHHHHHHHHH---------HHHHHHTTTCCGGGGCCSS
T ss_pred HHHHHHHHHHHH---------HHHHHHHhccccccccCCc
Confidence 999999999887 3335678899998777754
No 2
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.15 E-value=91 Score=18.38 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=25.9
Q ss_pred EEEEEEecccCCccccCCCCCHHHHHHHHHHHHHHHhCCCcCc
Q 038704 160 VYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 160 ~i~v~~l~pi~~~~~~~~~~~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
.++|...+..+. +..+++++.+.+.+.+.++.+...
T Consensus 5 ~i~i~~~~g~s~-------e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 5 IVNVKLLEGRSD-------EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp EEEEEEESCCCH-------HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred EEEEEEcCCCCH-------HHHHHHHHHHHHHHHHHhCcCccc
Confidence 456666554432 235789999999999999987644
No 3
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=25.38 E-value=1.1e+02 Score=18.06 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHHHhCCCcCc
Q 038704 180 SPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 180 ~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
..+++++.+.+.+.+.++.+..+
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45789999999999999987643
No 4
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.98 E-value=1.1e+02 Score=18.00 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=24.8
Q ss_pred EEEEEEecccCCccccCCCCCHHHHHHHHHHHHHHHhCCCcCc
Q 038704 160 VYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 160 ~i~v~~l~pi~~~~~~~~~~~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
.++|...+..+. +..+++++.+.+.+.+.++.+..+
T Consensus 2 ~i~i~~~~grs~-------eqk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 2 YVTVKMLEGRTD-------EQKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp EEEEEEESCCCH-------HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred EEEEEEcCCCCH-------HHHHHHHHHHHHHHHHHhCcCcCe
Confidence 345655554322 245789999999999999987643
No 5
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=23.63 E-value=1e+02 Score=18.66 Aligned_cols=23 Identities=9% Similarity=0.252 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHHHHHhCCCcCc
Q 038704 180 SPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 180 ~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
..++|++.+-+.+.+.+|.+...
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 46889999999999999987654
No 6
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.18 E-value=94 Score=18.60 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=25.3
Q ss_pred EEEEEEecccCCccccCCCCCHHHHHHHHHHHHHHHhCCCcCc
Q 038704 160 VYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 160 ~i~v~~l~pi~~~~~~~~~~~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
.++|+.....+. +..+++++.+-+.+++.+|.+...
T Consensus 3 ~i~i~~~~g~s~-------eqk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 3 VLKVTLLEGRPP-------EKKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp EEEEEEETTCCH-------HHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred EEEEEECCCCCH-------HHHHHHHHHHHHHHHHHhCCCccc
Confidence 456666554332 235789999999999999986543
No 7
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.13 E-value=1.4e+02 Score=18.09 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=25.3
Q ss_pred EEEEEEecccCCccccCCCCCHHHHHHHHHHHHHHHhCCCcCc
Q 038704 160 VYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 160 ~i~v~~l~pi~~~~~~~~~~~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
.++|.+.+..+. +..+++++.+.+.+.+.++.+...
T Consensus 2 ~i~I~~~~Grs~-------eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 2 LIRVTLLEGRSP-------QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp EEEEEEESCCCH-------HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred EEEEEEcCCCCH-------HHHHHHHHHHHHHHHHHhCcCccc
Confidence 355666654322 346789999999999999987643
No 8
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=20.72 E-value=1.5e+02 Score=18.10 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCcCc
Q 038704 180 SPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 180 ~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
..++|++.+.+.+.+.++.+...
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 35789999999999999987543
No 9
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=19.09 E-value=1.9e+02 Score=18.30 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCcCccchHHHH
Q 038704 178 GKSPHDVANYVQRILAATLGFECTNFTRKDKY 209 (237)
Q Consensus 178 ~~~~~e~a~~v~~~i~~~l~~~~~~~~~~dk~ 209 (237)
.++.+++.+++++.+++.++.+...++.+...
T Consensus 4 ~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l 35 (84)
T 2kwl_A 4 SMDNDEIFSKVRSIISEQLDKKEDEITTDSRF 35 (84)
T ss_dssp CSTHHHHHHHHHHHHHHHHCCCGGGCCTTTHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCcccCCCCCch
Confidence 45678999999999999999877777766554
No 10
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=18.88 E-value=1.2e+02 Score=18.96 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=26.1
Q ss_pred EEEEEEecccCCccccCCCCCHHHHHHHHHHHHHHHhCCCcCc
Q 038704 160 VYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTN 202 (237)
Q Consensus 160 ~i~v~~l~pi~~~~~~~~~~~~~e~a~~v~~~i~~~l~~~~~~ 202 (237)
.++|++.+..+. +..+++++.+.+.+.+.++.+...
T Consensus 3 ~I~I~~~~grs~-------eqK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 3 LLRITMLEGRST-------EQKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp EEEEEEESCCCH-------HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred EEEEEEcCCCCH-------HHHHHHHHHHHHHHHHHhCCCccc
Confidence 466776664332 346889999999999999987643
Done!